| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|118486243|gb|ABK94963.1| |
score: 144 |
e-value: 3e-33 |
Identity: 95.77% |
Span: 213bp (36.9%) |
Frame: 3 |
| unknown |
| Match: gi|2833375|sp|Q39290|RPAB5_BRANA |
score: 141 |
e-value: 3e-32 |
Identity: 92.96% |
Span: 213bp (36.9%) |
Frame: 3 |
| DNA-directed |
| Match: gi|30682258|ref|NP_849640.1| |
score: 140 |
e-value: 6e-32 |
Identity: 91.55% |
Span: 213bp (36.9%) |
Frame: 3 |
| NRPB10; DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] >gi21537033|gb|AAM61374.1| RNA polymerase II... |
| Match: gi|116778557|gb|ABK20909.1| |
score: 139 |
e-value: 1e-31 |
Identity: 94.2% |
Span: 207bp (35.8%) |
Frame: 3 |
| unknown [Picea sitchensis] >gi116781551|gb|ABK22149.1| unknown [Picea sitchensis] >gi|116789545|gb|ABK25286.1| unknow... |
| Match: gi|115484555|ref|NP_001067421.1| |
score: 139 |
e-value: 1e-31 |
Identity: 89.19% |
Span: 222bp (38.4%) |
Frame: 3 |
| Os11g0194800 [Oryza sativa (japonica cultivar-group)] >gi62733950|gb|AAX96059.1| dna-directed rna polymerase ii 8.2 k... |
| Match: gi|102139964|gb|ABF70104.1| |
score: 139 |
e-value: 1e-31 |
Identity: 94.2% |
Span: 207bp (35.8%) |
Frame: 3 |
| DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa balbisiana] |
| Match: gi|115487650|ref|NP_001066312.1| |
score: 139 |
e-value: 2e-31 |
Identity: 94.2% |
Span: 207bp (35.8%) |
Frame: 3 |
| Os12g0180400 [Oryza sativa (japonica cultivar-group)] >gi113648819|dbj|BAF29331.1| Os12g0180400 [Oryza sativa Japonic... |
| Match: gi|168033365|ref|XP_001769186.1| |
score: 138 |
e-value: 2e-31 |
Identity: 90.14% |
Span: 213bp (36.9%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162679612|gb|EDQ66058.1| predicted protein [Physcomitrella... |
| Match: gi|194696346|gb|ACF82257.1| |
score: 138 |
e-value: 3e-31 |
Identity: 91.55% |
Span: 213bp (36.9%) |
Frame: 3 |
| unknown |
| Match: gi|15220572|ref|NP_176363.1| |
score: 138 |
e-value: 2e-31 |
Identity: 91.3% |
Span: 207bp (35.8%) |
Frame: 3 |
| DNA-directed RNA polymerase II, putative (RPB10) [Arabidopsis thaliana] >gi11134747|sp|Q9SYA6.1|RPAB5_ARATH RecName: ... |
| Match: gi|195655855|gb|ACG47395.1| |
score: 138 |
e-value: 2e-31 |
Identity: 91.55% |
Span: 213bp (36.9%) |
Frame: 3 |
| DNA-directed |
| Match: gi|157358442|emb|CAO66102.1| |
score: 130 |
e-value: 6e-29 |
Identity: 93.75% |
Span: 192bp (33.2%) |
Frame: 3 |
| unnamed |
| Match: gi|195646300|gb|ACG42618.1| |
score: 127 |
e-value: 4e-28 |
Identity: 93.65% |
Span: 189bp (32.7%) |
Frame: 3 |
| DNA-directed |
| Match: gi|145352128|ref|XP_001420409.1| |
score: 125 |
e-value: 2e-27 |
Identity: 86.57% |
Span: 201bp (34.8%) |
Frame: 3 |
| predicted protein [Ostreococcus lucimarinus CCE9901] >gi144580643|gb|ABO98702.1| predicted protein [Ostreococcus luci... |
| Match: gi|159470673|ref|XP_001693481.1| |
score: 125 |
e-value: 1e-27 |
Identity: 85.29% |
Span: 204bp (35.3%) |
Frame: 3 |
| DNA-directed RNA polymerases I/II/III subunit [Chlamydomonas reinhardtii] >gi158282984|gb|EDP08735.1| DNA-directed RN... |
| Match: gi|219115427|ref|XP_002178509.1| |
score: 123 |
e-value: 9e-27 |
Identity: 87.5% |
Span: 192bp (33.2%) |
Frame: 3 |
| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi217410244|gb|EEC50174.1| predicted protein [Phaeodactylu... |
| Match: gi|219470664|ref|XP_002232849.1| |
score: 122 |
e-value: 2e-26 |
Identity: 82.35% |
Span: 204bp (35.3%) |
Frame: 3 |
| hypothetical |
| Match: gi|195996661|ref|XP_002108199.1| |
score: 121 |
e-value: 3e-26 |
Identity: 82.09% |
Span: 201bp (34.8%) |
Frame: 3 |
| conserved hypothetical protein [Trichoplax adhaerens] >gi190588975|gb|EDV28997.1| conserved hypothetical protein [Tri... |
| Match: gi|195452198|ref|XP_002073255.1| |
score: 121 |
e-value: 3e-26 |
Identity: 83.58% |
Span: 201bp (34.8%) |
Frame: 3 |
| GK14032 [Drosophila willistoni] >gi194169340|gb|EDW84241.1| GK14032 [Drosophila willistoni] |
| Match: gi|170571001|ref|XP_001891560.1| |
score: 121 |
e-value: 4e-26 |
Identity: 82.09% |
Span: 201bp (34.8%) |
Frame: 3 |
| DNA-directed RNA polymerase II 7.6 kDa polypeptide [Brugia malayi] >gi158603873|gb|EDP39636.1| DNA-directed RNA polym... |
| Match: gi|60653741|gb|AAX29564.1| |
score: 120 |
e-value: 8e-26 |
Identity: 80.6% |
Span: 201bp (34.8%) |
Frame: 3 |
| gi|60653741|gb|AAX29564.1| polymerase [synthetic construct] |
| Match: gi|24649759|ref|NP_651280.1| |
score: 120 |
e-value: 8e-26 |
Identity: 82.09% |
Span: 201bp (34.8%) |
Frame: 3 |
| gi|24649759|ref|NP_651280.1| CG13628-PA [Drosophila melanogaster] gi|11134791|sp|Q9VC49|RPBX_DROME DNA-directed RNA p... |
| Match: gi|10863925|ref|NP_066951.1| |
score: 120 |
e-value: 8e-26 |
Identity: 80.6% |
Span: 201bp (34.8%) |
Frame: 3 |
| gi|10863925|ref|NP_066951.1| DNA directed RNA polymerase II polypeptide L; polymerase (RNA) II (DNA directed) polypep... |
| Match: gi|109150091|gb|AAI17670.1| |
score: 120 |
e-value: 5e-26 |
Identity: 82.09% |
Span: 201bp (34.8%) |
Frame: 3 |
| Unknown |
| Match: gi|33086454|gb|AAP92539.1| |
score: 120 |
e-value: 8e-26 |
Identity: 80.6% |
Span: 201bp (34.8%) |
Frame: 3 |
| gi|33086454|gb|AAP92539.1| Ab1-108 [Rattus norvegicus] |
| Match: gi|156367592|ref|XP_001627500.1| |
score: 120 |
e-value: 6e-26 |
Identity: 80.6% |
Span: 201bp (34.8%) |
Frame: 3 |
| predicted protein [Nematostella vectensis] >gi156214411|gb|EDO35400.1| predicted protein [Nematostella vectensis] |
| Match: gi|125820631|ref|XP_697922.2| |
score: 120 |
e-value: 6e-26 |
Identity: 80.6% |
Span: 201bp (34.8%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|198424087|ref|XP_002128784.1| |
score: 120 |
e-value: 5e-26 |
Identity: 80.6% |
Span: 201bp (34.8%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|58394474|ref|XP_320749.2| |
score: 120 |
e-value: 8e-26 |
Identity: 83.58% |
Span: 201bp (34.8%) |
Frame: 3 |
| ENSANGP00000020255 |
| Match: gi|66823991|ref|XP_645350.1| |
score: 120 |
e-value: 8e-26 |
Identity: 86.15% |
Span: 195bp (33.7%) |
Frame: 3 |
| RNA polymerase N/8 kDa subunit [Dictyostelium discoideum AX4] >gi74857899|sp|Q55AB6.1|RPAB5_DICDI RecName: Full=DNA-d... |
| Match: gi|115742013|ref|XP_790633.2| |
score: 120 |
e-value: 5e-26 |
Identity: 82.09% |
Span: 201bp (34.8%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|119622813|gb|EAX02408.1| |
score: 120 |
e-value: 8e-26 |
Identity: 80.6% |
Span: 201bp (34.8%) |
Frame: 3 |
| polymerase |
| Match: gi|156555269|ref|XP_001602943.1| |
score: 119 |
e-value: 2e-25 |
Identity: 82.09% |
Span: 201bp (34.8%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|63102521|gb|AAH95745.1| |
score: 119 |
e-value: 1e-25 |
Identity: 80.6% |
Span: 201bp (34.8%) |
Frame: 3 |
| gi|63102521|gb|AAH95745.1| Zgc:112305 protein [Danio rerio] |
| Match: gi|149249719|ref|XP_001480836.1| |
score: 119 |
e-value: 2e-25 |
Identity: 80.6% |
Span: 201bp (34.8%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|197127741|gb|ACH44239.1| |
score: 119 |
e-value: 2e-25 |
Identity: 79.1% |
Span: 201bp (34.8%) |
Frame: 3 |
| putative |
| Match: gi|110589602|gb|ABG77305.1| |
score: 118 |
e-value: 3e-25 |
Identity: 80.3% |
Span: 198bp (34.3%) |
Frame: 3 |
| DNA-directed |
| Match: gi|47230481|emb|CAF99674.1| |
score: 118 |
e-value: 2e-25 |
Identity: 77.61% |
Span: 201bp (34.8%) |
Frame: 3 |
| gi|47230481|emb|CAF99674.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|218186529|gb|EEC68956.1| |
score: 118 |
e-value: 2e-25 |
Identity: 58.56% |
Span: 207bp (35.8%) |
Frame: 3 |
| hypothetical |
| Match: gi|193603498|ref|XP_001942802.1| |
score: 117 |
e-value: 4e-25 |
Identity: 80.6% |
Span: 201bp (34.8%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|17509857|ref|NP_490923.1| |
score: 117 |
e-value: 7e-25 |
Identity: 77.61% |
Span: 201bp (34.8%) |
Frame: 3 |
| gi|17509857|ref|NP_490923.1| RNA polymerase (7.8 kD) (1C631) [Caenorhabditis elegans] gi|13491273|gb|AAK27863.1| Hypo... |
| Match: gi|209734606|gb|ACI68172.1| |
score: 117 |
e-value: 5e-25 |
Identity: 79.1% |
Span: 201bp (34.8%) |
Frame: 3 |
| DNA-directed |
| Match: gi|60687574|gb|AAX30120.1| |
score: 116 |
e-value: 9e-25 |
Identity: 74.63% |
Span: 201bp (34.8%) |
Frame: 3 |
| gi|60687574|gb|AAX30120.1| putative RNA polymerase subunit [Schistosoma japonicum] |
| Match: gi|125576493|gb|EAZ17715.1| |
score: 115 |
e-value: 3e-24 |
Identity: 73.17% |
Span: 192bp (33.2%) |
Frame: 3 |
| hypothetical |
| Match: gi|21912584|emb|CAD21547.1| |
score: 112 |
e-value: 2e-23 |
Identity: 73.13% |
Span: 201bp (34.8%) |
Frame: 3 |
| gi|21912584|emb|CAD21547.1| putative RNA polymerase subunit [Taenia solium] |
| Match: gi|210075220|ref|XP_002143005.1| |
score: 112 |
e-value: 2e-23 |
Identity: 74.63% |
Span: 201bp (34.8%) |
Frame: 3 |
| YALI0B04851p |
| Match: gi|170099666|ref|XP_001881051.1| |
score: 112 |
e-value: 2e-23 |
Identity: 67.57% |
Span: 222bp (38.4%) |
Frame: 3 |
| predicted |
| Match: gi|109507732|ref|XP_577644.2| |
score: 112 |
e-value: 1e-23 |
Identity: 76.12% |
Span: 201bp (34.8%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|213404468|ref|XP_002173006.1| |
score: 110 |
e-value: 6e-23 |
Identity: 76.12% |
Span: 201bp (34.8%) |
Frame: 3 |
| DNA-directed |
| Match: gi|19115709|ref|NP_594797.1| |
score: 110 |
e-value: 6e-23 |
Identity: 72.46% |
Span: 207bp (35.8%) |
Frame: 3 |
| gi|19115709|ref|NP_594797.1| dna-directed rna polymerases i, ii, and iii 8.3 kd polypeptide(abc10-beta).dna-directed ... |
| Match: gi|28828904|gb|AAO51490.1| |
score: 110 |
e-value: 6e-23 |
Identity: 83.61% |
Span: 183bp (31.7%) |
Frame: 3 |
| gi|28828904|gb|AAO51490.1| similar to 60S ribosomal protein L32 [Caenorhabditis elegans] [Dictyostelium discoideum] |
| Match: gi|169610481|ref|XP_001798659.1| |
score: 109 |
e-value: 1e-22 |
Identity: 65.22% |
Span: 207bp (35.8%) |
Frame: 3 |
| hypothetical |
| Match: gi|109471543|ref|XP_001063101.1| |
score: 109 |
e-value: 1e-22 |
Identity: 76.12% |
Span: 201bp (34.8%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|82894570|ref|XP_895065.1| |
score: 108 |
e-value: 2e-22 |
Identity: 76.12% |
Span: 201bp (34.8%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|109508391|ref|XP_001060192.1| |
score: 108 |
e-value: 2e-22 |
Identity: 74.63% |
Span: 201bp (34.8%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|160330961|ref|XP_001712188.1| |
score: 107 |
e-value: 4e-22 |
Identity: 71.64% |
Span: 201bp (34.8%) |
Frame: 3 |
| rpb10 |
| Match: gi|169849419|ref|XP_001831413.1| |
score: 107 |
e-value: 4e-22 |
Identity: 76.19% |
Span: 189bp (32.7%) |
Frame: 3 |
| conserved |
| Match: gi|134037062|gb|ABO47871.1| |
score: 107 |
e-value: 5e-22 |
Identity: 67.16% |
Span: 201bp (34.8%) |
Frame: 3 |
| DNA-directed |
| Match: gi|146414706|ref|XP_001483323.1| |
score: 107 |
e-value: 7e-22 |
Identity: 70% |
Span: 207bp (35.8%) |
Frame: 3 |
| conserved |
| Match: gi|162605804|ref|XP_001713417.1| |
score: 106 |
e-value: 1e-21 |
Identity: 74.6% |
Span: 189bp (32.7%) |
Frame: 3 |
| Putative |
| Match: gi|50427511|ref|XP_462368.1| |
score: 106 |
e-value: 9e-22 |
Identity: 70% |
Span: 207bp (35.8%) |
Frame: 3 |
| hypothetical |
| Match: gi|126274455|ref|XP_001387551.1| |
score: 105 |
e-value: 2e-21 |
Identity: 68.57% |
Span: 207bp (35.8%) |
Frame: 3 |
| DNA-directed |
| Match: gi|58263334|ref|XP_569077.1| |
score: 105 |
e-value: 2e-21 |
Identity: 71.64% |
Span: 201bp (34.8%) |
Frame: 3 |
| DNA-directed |
| Match: gi|156088307|ref|XP_001611560.1| |
score: 105 |
e-value: 2e-21 |
Identity: 68.66% |
Span: 201bp (34.8%) |
Frame: 3 |
| RNA |
| Match: gi|149237064|ref|XP_001524409.1| |
score: 105 |
e-value: 2e-21 |
Identity: 68.57% |
Span: 207bp (35.8%) |
Frame: 3 |
| DNA-directed |
| Match: gi|209877981|ref|XP_002140432.1| |
score: 105 |
e-value: 3e-21 |
Identity: 73.13% |
Span: 201bp (34.8%) |
Frame: 3 |
| DNA-directed |
| Match: gi|196049184|emb|CAR58060.1| |
score: 102 |
e-value: 2e-20 |
Identity: 65.71% |
Span: 207bp (35.8%) |
Frame: 3 |
| unnamed |
| Match: gi|6324784|ref|NP_014853.1| |
score: 102 |
e-value: 1e-20 |
Identity: 67.14% |
Span: 207bp (35.8%) |
Frame: 3 |
| gi|6324784|ref|NP_014853.1| RNA polymerase II subunit; Rpb10p [Saccharomyces cerevisiae] gi|417696|sp|P22139|RPBX_YEA... |
| Match: gi|156843936|ref|XP_001645033.1| |
score: 102 |
e-value: 1e-20 |
Identity: 65.71% |
Span: 207bp (35.8%) |
Frame: 3 |
| hypothetical |
| Match: gi|71030322|ref|XP_764803.1| |
score: 102 |
e-value: 2e-20 |
Identity: 70.31% |
Span: 192bp (33.2%) |
Frame: 3 |
| DNA-directed |
| Match: gi|215460484|gb|EEB94194.1| |
score: 102 |
e-value: 2e-20 |
Identity: 79.31% |
Span: 174bp (30.1%) |
Frame: 3 |
| hypothetical |
| Match: gi|211589890|emb|CAP96045.1| |
score: 102 |
e-value: 2e-20 |
Identity: 67.16% |
Span: 201bp (34.8%) |
Frame: 3 |
| Pc21g11480 |
| Match: gi|161899111|ref|XP_001712782.1| |
score: 101 |
e-value: 4e-20 |
Identity: 64.62% |
Span: 195bp (33.7%) |
Frame: 3 |
| RNA |
| Match: gi|212546131|ref|XP_002153219.1| |
score: 101 |
e-value: 4e-20 |
Identity: 63.77% |
Span: 207bp (35.8%) |
Frame: 3 |
| DNA-directed |
| Match: gi|45185849|ref|NP_983565.1| |
score: 100 |
e-value: 9e-20 |
Identity: 64.29% |
Span: 207bp (35.8%) |
Frame: 3 |
| gi|45185849|ref|NP_983565.1| ACR163Wp [Eremothecium gossypii] >gi|44981639|gb|AAS51389.1| ACR163Wp [Eremothecium goss... |
| Match: gi|119489458|ref|XP_001262893.1| |
score: 100 |
e-value: 5e-20 |
Identity: 65.67% |
Span: 201bp (34.8%) |
Frame: 3 |
| DNA-directed |
| Match: gi|50306767|ref|XP_453359.1| |
score: 100 |
e-value: 9e-20 |
Identity: 64.29% |
Span: 207bp (35.8%) |
Frame: 3 |
| gi|50306767|ref|XP_453359.1| unnamed protein product [Kluyveromyces lactis] >gi|49642493|emb|CAH00455.1| unnamed prot... |
| Match: gi|218713151|gb|EED12576.1| |
score: 100 |
e-value: 5e-20 |
Identity: 63.77% |
Span: 207bp (35.8%) |
Frame: 3 |
| DNA-directed |
| Match: gi|71022207|ref|XP_761334.1| |
score: 100 |
e-value: 9e-20 |
Identity: 71.88% |
Span: 192bp (33.2%) |
Frame: 3 |
| gi|71022207|ref|XP_761334.1| hypothetical protein UM05187.1 [Ustilago maydis 521] >gi|46097828|gb|EAK83061.1| hypothe... |
| Match: gi|211968987|gb|EEB04183.1| |
score: 100 |
e-value: 9e-20 |
Identity: 64.18% |
Span: 201bp (34.8%) |
Frame: 3 |
| DNA-directed |
| Match: gi|145515940|ref|XP_001443864.1| |
score: 100 |
e-value: 5e-20 |
Identity: 68.25% |
Span: 189bp (32.7%) |
Frame: 3 |
| hypothetical |
| Match: gi|145524273|ref|XP_001447964.1| |
score: 99.8 |
e-value: 1e-19 |
Identity: 66.67% |
Span: 189bp (32.7%) |
Frame: 3 |
| hypothetical |
| Match: gi|126649024|ref|XP_001388074.1| |
score: 99.8 |
e-value: 1e-19 |
Identity: 68.66% |
Span: 201bp (34.8%) |
Frame: 3 |
| putative |
| Match: gi|189204954|ref|XP_001938812.1| |
score: 99.8 |
e-value: 1e-19 |
Identity: 60.87% |
Span: 207bp (35.8%) |
Frame: 3 |
| DNA-directed |
| Match: gi|145613978|ref|XP_363299.2| |
score: 98.6 |
e-value: 2e-19 |
Identity: 64.06% |
Span: 192bp (33.2%) |
Frame: 3 |
| DNA-directed |
| Match: gi|164660666|ref|XP_001731456.1| |
score: 98.6 |
e-value: 2e-19 |
Identity: 69.23% |
Span: 195bp (33.7%) |
Frame: 3 |
| hypothetical |
| Match: gi|194037594|ref|XP_001926826.1| |
score: 98.2 |
e-value: 3e-19 |
Identity: 65.67% |
Span: 201bp (34.8%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|154321539|ref|XP_001560085.1| |
score: 98.2 |
e-value: 3e-19 |
Identity: 64.18% |
Span: 201bp (34.8%) |
Frame: 3 |
| hypothetical |
| Match: gi|70982284|ref|XP_746670.1| |
score: 96.3 |
e-value: 1e-18 |
Identity: 67.74% |
Span: 186bp (32.2%) |
Frame: 3 |
| RNA |
| Match: gi|85116181|ref|XP_965008.1| |
score: 95.1 |
e-value: 3e-18 |
Identity: 66.67% |
Span: 186bp (32.2%) |
Frame: 3 |
| hypothetical |
| Match: gi|156094824|ref|XP_001613448.1| |
score: 92.8 |
e-value: 1e-17 |
Identity: 61.19% |
Span: 201bp (34.8%) |
Frame: 3 |
| DNA-directed |
| Match: gi|154338820|ref|XP_001565632.1| |
score: 92 |
e-value: 2e-17 |
Identity: 60.32% |
Span: 189bp (32.7%) |
Frame: 3 |
| DNA-directed |
| Match: gi|116182146|ref|XP_001220922.1| |
score: 91.3 |
e-value: 4e-17 |
Identity: 63.49% |
Span: 186bp (32.2%) |
Frame: 3 |
| hypothetical |
| Match: gi|68063847|ref|XP_673919.1| |
score: 91.3 |
e-value: 4e-17 |
Identity: 61.19% |
Span: 201bp (34.8%) |
Frame: 3 |
| DNA-directed |
| Match: gi|124511724|ref|XP_001348995.1| |
score: 90.9 |
e-value: 5e-17 |
Identity: 59.7% |
Span: 201bp (34.8%) |
Frame: 3 |
| DNA-directed |
| Match: gi|171695056|ref|XP_001912452.1| |
score: 89.4 |
e-value: 2e-16 |
Identity: 63.49% |
Span: 186bp (32.2%) |
Frame: 3 |
| unnamed |
| Match: gi|68077065|ref|XP_680452.1| |
score: 89 |
e-value: 2e-16 |
Identity: 61.19% |
Span: 201bp (34.8%) |
Frame: 3 |
| gi|68077065|ref|XP_680452.1| hypothetical protein PB001541.02.0 [Plasmodium berghei] >gi|56501385|emb|CAH98929.1| hyp... |
| Match: gi|218186531|gb|EEC68958.1| |
score: 89 |
e-value: 2e-16 |
Identity: 56.99% |
Span: 213bp (36.9%) |
Frame: 3 |
| hypothetical |
| Match: gi|71406041|ref|XP_805591.1| |
score: 87.8 |
e-value: 4e-16 |
Identity: 57.14% |
Span: 189bp (32.7%) |
Frame: 3 |
| gi|71406041|ref|XP_805591.1| DNA-directed RNA polymerase subunit, putative [Trypanosoma cruzi] >gi|70869057|gb|EAN837... |
| Match: gi|123504806|ref|XP_001328837.1| |
score: 87.4 |
e-value: 6e-16 |
Identity: 57.81% |
Span: 189bp (32.7%) |
Frame: 3 |
| hypothetical |
|
| 39 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At1G11475.1 |
score: 140 |
e-value: 5e-34 |
Identity: 91.55% |
Span: 213bp (36.9%) |
Frame: 3 |
| DNA-directed RNA polymerase II, putative | chr1:3862520-3863805 FORWARD |
| Match: At1G61700.1 |
score: 138 |
e-value: 2e-33 |
Identity: 91.3% |
Span: 207bp (35.8%) |
Frame: 3 |
| DNA-directed RNA polymerase II, putative (RPB10) | chr1:22790770-22791777 FORWARD |
|
| swissprot [blastx] | Showing best 38 hits recorded |
| Match: Q39290 |
score: 141 |
e-value: 2e-33 |
Identity: 92.96% |
Span: 213bp (36.9%) |
Frame: 3 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Brassica napus PE=3 SV=1 |
| Match: Q9SYA6 |
score: 138 |
e-value: 2e-32 |
Identity: 91.3% |
Span: 207bp (35.8%) |
Frame: 3 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Arabidopsis thaliana GN=At1g61700 PE=2 SV=1 |
| Match: P62876 |
score: 120 |
e-value: 6e-27 |
Identity: 80.6% |
Span: 201bp (34.8%) |
Frame: 3 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Mus musculus GN=Polr2l PE=2 SV=1 |
| Match: Q6QN04 |
score: 120 |
e-value: 6e-27 |
Identity: 80.6% |
Span: 201bp (34.8%) |
Frame: 3 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Chinchilla lanigera GN=POLR2L PE=3 SV=1 |
| Match: P62875 |
score: 120 |
e-value: 6e-27 |
Identity: 80.6% |
Span: 201bp (34.8%) |
Frame: 3 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Homo sapiens GN=POLR2L PE=1 SV=1 |
| Match: Q9VC49 |
score: 120 |
e-value: 6e-27 |
Identity: 82.09% |
Span: 201bp (34.8%) |
Frame: 3 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Drosophila melanogaster GN=Rpb10 PE=1 SV=1 |
| Match: Q32P78 |
score: 120 |
e-value: 6e-27 |
Identity: 80.6% |
Span: 201bp (34.8%) |
Frame: 3 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Bos taurus GN=POLR2L PE=3 SV=1 |
| Match: Q55AB6 |
score: 120 |
e-value: 6e-27 |
Identity: 86.15% |
Span: 195bp (33.7%) |
Frame: 3 |
| DNA-directed RNA polymerases I, II, and III subunit rpabc5 OS=Dictyostelium discoideum GN=polr2l PE=3 SV=1 |
| Match: Q9GR61 |
score: 117 |
e-value: 5e-26 |
Identity: 77.61% |
Span: 201bp (34.8%) |
Frame: 3 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Caenorhabditis elegans GN=Y37E3.3 PE=2 SV=1 |
| Match: O13877 |
score: 110 |
e-value: 5e-24 |
Identity: 72.46% |
Span: 207bp (35.8%) |
Frame: 3 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Schizosaccharomyces pombe GN=rpb10 PE=1 SV=2 |
| Match: P22139 |
score: 102 |
e-value: 1e-21 |
Identity: 67.14% |
Span: 207bp (35.8%) |
Frame: 3 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Saccharomyces cerevisiae GN=RPB10 PE=1 SV=2 |
| Match: Q75BV8 |
score: 100 |
e-value: 7e-21 |
Identity: 64.29% |
Span: 207bp (35.8%) |
Frame: 3 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Ashbya gossypii GN=RPB10 PE=3 SV=1 |
| Match: Q8SRS6 |
score: 84 |
e-value: 5e-16 |
Identity: 51.52% |
Span: 198bp (34.3%) |
Frame: 3 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Encephalitozoon cuniculi GN=RPB10 PE=3 SV=1 |
| Match: Q8TVB4 |
score: 80.1 |
e-value: 7e-15 |
Identity: 53.97% |
Span: 186bp (32.2%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Methanopyrus kandleri GN=rpoN PE=3 SV=1 |
| Match: A4YIM8 |
score: 79 |
e-value: 2e-14 |
Identity: 54.84% |
Span: 186bp (32.2%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpoN PE=3 SV=1 |
| Match: Q96YW4 |
score: 78.6 |
e-value: 2e-14 |
Identity: 50% |
Span: 186bp (32.2%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Sulfolobus tokodaii GN=rpoN PE=3 SV=1 |
| Match: O59298 |
score: 77.4 |
e-value: 5e-14 |
Identity: 56.45% |
Span: 186bp (32.2%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Pyrococcus horikoshii GN=rpoN PE=3 SV=2 |
| Match: P60292 |
score: 77 |
e-value: 6e-14 |
Identity: 54.84% |
Span: 186bp (32.2%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Pyrococcus furiosus GN=rpoN PE=3 SV=1 |
| Match: Q980Z8 |
score: 77 |
e-value: 6e-14 |
Identity: 48.39% |
Span: 186bp (32.2%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Sulfolobus solfataricus GN=rpoN PE=1 SV=1 |
| Match: P60291 |
score: 77 |
e-value: 6e-14 |
Identity: 54.84% |
Span: 186bp (32.2%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Pyrococcus abyssi GN=rpoN PE=3 SV=1 |
| Match: A8M9S4 |
score: 74.3 |
e-value: 4e-13 |
Identity: 44.78% |
Span: 201bp (34.8%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpoN |
| Match: Q5JJC9 |
score: 72.8 |
e-value: 1e-12 |
Identity: 50% |
Span: 186bp (32.2%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Pyrococcus kodakaraensis GN=rpoN |
| Match: A0B6E7 |
score: 72.8 |
e-value: 1e-12 |
Identity: 49.18% |
Span: 183bp (31.7%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpoN |
| Match: Q46CK8 |
score: 72.8 |
e-value: 1e-12 |
Identity: 52.46% |
Span: 183bp (31.7%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpoN |
| Match: Q8TT41 |
score: 72 |
e-value: 2e-12 |
Identity: 50.82% |
Span: 183bp (31.7%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Methanosarcina acetivorans GN=rpoN |
| Match: Q8PW43 |
score: 71.2 |
e-value: 3e-12 |
Identity: 52.46% |
Span: 183bp (31.7%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Methanosarcina mazei GN=rpoN |
| Match: A3DMR0 |
score: 70.5 |
e-value: 6e-12 |
Identity: 45.16% |
Span: 186bp (32.2%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpoN |
| Match: A2SSV3 |
score: 70.5 |
e-value: 6e-12 |
Identity: 50.82% |
Span: 183bp (31.7%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpoN |
| Match: Q0W8C7 |
score: 70.1 |
e-value: 7e-12 |
Identity: 48.57% |
Span: 183bp (31.7%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Uncultured methanogenic archaeon RC-I GN=rpoN |
| Match: Q12TI4 |
score: 69.3 |
e-value: 1e-11 |
Identity: 49.18% |
Span: 183bp (31.7%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Methanococcoides burtonii (strain DSM 6242) GN=rpoN |
| Match: A4WNA8 |
score: 68.9 |
e-value: 2e-11 |
Identity: 53.23% |
Span: 186bp (32.2%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpoN |
| Match: P39472 |
score: 68.9 |
e-value: 2e-11 |
Identity: 43.55% |
Span: 186bp (32.2%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Sulfolobus acidocaldarius GN=rpoN |
| Match: A7IAH1 |
score: 68.9 |
e-value: 2e-11 |
Identity: 50.82% |
Span: 183bp (31.7%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Methanoregula boonei (strain 6A8) GN=rpoN |
| Match: A3MXZ9 |
score: 68.6 |
e-value: 2e-11 |
Identity: 53.23% |
Span: 186bp (32.2%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpoN |
| Match: Q18G60 |
score: 68.2 |
e-value: 3e-11 |
Identity: 47.62% |
Span: 186bp (32.2%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpoN |
| Match: A3CWI3 |
score: 67.8 |
e-value: 4e-11 |
Identity: 50.82% |
Span: 183bp (31.7%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpoN |
| Match: O29135 |
score: 66.6 |
e-value: 8e-11 |
Identity: 46.67% |
Span: 180bp (31.1%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Archaeoglobus fulgidus GN=rpoN |
| Match: Q9YB47 |
score: 66.6 |
e-value: 8e-11 |
Identity: 46.77% |
Span: 186bp (32.2%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit N OS=Aeropyrum pernix GN=rpoN |
|