| arabidopsis/peptide [blastx] | Showing best 8 hits recorded |
| Match: At5G65770.1 |
score: 107 |
e-value: 8e-32 |
Identity: 58.06% |
Span: 279bp (47.4%) |
Frame: 3 |
| nuclear matrix constituent protein-related | chr5:26328813-26332770 FORWARD |
| Match: At1G67230.1 |
score: 67 |
e-value: 3e-18 |
Identity: 41.18% |
Span: 255bp (43.4%) |
Frame: 3 |
| similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G68790.1); similar to nuclear matrix constituent protein-... |
| Match: At1G13220.1 |
score: 61.6 |
e-value: 1e-18 |
Identity: 37.93% |
Span: 261bp (44.4%) |
Frame: 3 |
| nuclear matrix constituent protein-related | chr1:4515657-4517412 FORWARD |
| Match: At1G13220.2 |
score: 61.6 |
e-value: 1e-18 |
Identity: 37.93% |
Span: 261bp (44.4%) |
Frame: 3 |
| nuclear matrix constituent protein-related | chr1:4515696-4520068 FORWARD |
| Match: At1G13220.1 |
score: 49.7 |
e-value: 1e-18 |
Identity: 47.69% |
Span: 195bp (33.2%) |
Frame: 1 |
| nuclear matrix constituent protein-related | chr1:4515657-4517412 FORWARD |
| Match: At1G13220.2 |
score: 49.7 |
e-value: 1e-18 |
Identity: 47.69% |
Span: 195bp (33.2%) |
Frame: 1 |
| nuclear matrix constituent protein-related | chr1:4515696-4520068 FORWARD |
| Match: At5G65770.1 |
score: 47.8 |
e-value: 8e-32 |
Identity: 46.38% |
Span: 207bp (35.2%) |
Frame: 1 |
| nuclear matrix constituent protein-related | chr5:26328813-26332770 FORWARD |
| Match: At1G67230.1 |
score: 43.1 |
e-value: 3e-18 |
Identity: 42.03% |
Span: 207bp (35.2%) |
Frame: 1 |
| similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G68790.1); similar to nuclear matrix constituent protein-... |
|
| 5 lower scoring hits censored -- only 8 best hits are stored. |
| genbank/nr [blastx] | Showing best 31 hits recorded |
| Match: gi|2827709|emb|CAA16682.1| |
score: 107 |
e-value: 6e-30 |
Identity: 58.06% |
Span: 279bp (47.4%) |
Frame: 3 |
| gi|2827709|emb|CAA16682.1| predicted protein [Arabidopsis thaliana] >gi|7486519|pir||T05892 hypothetical protein F6H1... |
| Match: gi|15239130|ref|NP_201378.1| |
score: 107 |
e-value: 6e-30 |
Identity: 58.06% |
Span: 279bp (47.4%) |
Frame: 3 |
| gi|15239130|ref|NP_201378.1| nuclear matrix constituent protein 1 (NMCP1)-related [Arabidopsis thaliana] gi|26397174|... |
| Match: gi|34909858|ref|NP_916276.1| |
score: 84.7 |
e-value: 2e-28 |
Identity: 53.75% |
Span: 240bp (40.8%) |
Frame: 3 |
| gi|34909858|ref|NP_916276.1| putative nuclear matrix constituent protein 1 [Oryza sativa (japonica cultivar-group)] g... |
| Match: gi|9828634|gb|AAG00257.1| |
score: 68.9 |
e-value: 2e-17 |
Identity: 41.86% |
Span: 258bp (43.9%) |
Frame: 3 |
| gi|9828634|gb|AAG00257.1| F1N21.5 [Arabidopsis thaliana] |
| Match: gi|2190187|dbj|BAA20407.1| |
score: 67 |
e-value: 2e-18 |
Identity: 42.35% |
Span: 255bp (43.4%) |
Frame: 3 |
| nuclear matrix constituent protein 1 [Daucus carota] |
| Match: gi|110741402|dbj|BAF02250.1| |
score: 67 |
e-value: 2e-16 |
Identity: 41.18% |
Span: 255bp (43.4%) |
Frame: 3 |
| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|15220369|ref|NP_176892.1| |
score: 67 |
e-value: 2e-16 |
Identity: 41.18% |
Span: 255bp (43.4%) |
Frame: 3 |
| LINC1 (LITTLE NUCLEI1) [Arabidopsis thaliana] |
| Match: gi|50912019|ref|XP_467417.1| |
score: 66.2 |
e-value: 2e-19 |
Identity: 41.18% |
Span: 255bp (43.4%) |
Frame: 3 |
| putative |
| Match: gi|34909858|ref|NP_916276.1| |
score: 65.9 |
e-value: 2e-28 |
Identity: 61.76% |
Span: 204bp (34.7%) |
Frame: 1 |
| gi|34909858|ref|NP_916276.1| putative nuclear matrix constituent protein 1 [Oryza sativa (japonica cultivar-group)] g... |
| Match: gi|18391490|ref|NP_563924.1| |
score: 61.6 |
e-value: 9e-17 |
Identity: 37.93% |
Span: 261bp (44.4%) |
Frame: 3 |
| LINC2 (LITTLE NUCLEI2) [Arabidopsis thaliana] >gi4850405|gb|AAD31075.1|AC007357_24 Similar to gb|D64087 nuclear matri... |
| Match: gi|18391488|ref|NP_563923.1| |
score: 61.6 |
e-value: 9e-17 |
Identity: 37.93% |
Span: 261bp (44.4%) |
Frame: 3 |
| LINC2 (LITTLE NUCLEI2) [Arabidopsis thaliana] |
| Match: gi|23308351|gb|AAN18145.1| |
score: 60.5 |
e-value: 2e-16 |
Identity: 37.93% |
Span: 261bp (44.4%) |
Frame: 3 |
| At1g13220/F3F19_25 |
| Match: gi|9294795|gb|AAF86676.1| |
score: 54.7 |
e-value: 7e-06 |
Identity: 88.46% |
Span: 78bp (13.3%) |
Frame: -2 |
| beta-galactosidase |
| Match: gi|560554|gb|AAB31222.1| |
score: 54.7 |
e-value: 7e-06 |
Identity: 88.46% |
Span: 78bp (13.3%) |
Frame: -2 |
| gi|560554|gb|AAB31222.1| truncated protein [synthetic construct] |
| Match: gi|33325960|gb|AAQ08405.1| |
score: 54.7 |
e-value: 7e-06 |
Identity: 88.46% |
Span: 78bp (13.3%) |
Frame: -2 |
| LacZ |
| Match: gi|833827|gb|AAB06695.1| |
score: 54.7 |
e-value: 7e-06 |
Identity: 88.46% |
Span: 78bp (13.3%) |
Frame: -2 |
| LacZ |
| Match: gi|31415494|gb|AAP44986.1| |
score: 54.7 |
e-value: 7e-06 |
Identity: 88.46% |
Span: 78bp (13.3%) |
Frame: -2 |
| gi|31415494|gb|AAP44986.1| LacZalpha [Shuttle vector pNG168] |
| Match: gi|560556|gb|AAB31223.1| |
score: 54.7 |
e-value: 7e-06 |
Identity: 88.46% |
Span: 78bp (13.3%) |
Frame: -2 |
| gi|560556|gb|AAB31223.1| influenza virus hemagglutinin 5' epitope tag [synthetic construct] |
| Match: gi|4028991|emb|CAA06476.1| |
score: 54.7 |
e-value: 7e-06 |
Identity: 88.46% |
Span: 78bp (13.3%) |
Frame: -2 |
| glutamate |
| Match: gi|7384996|gb|AAF61634.1| |
score: 54.7 |
e-value: 7e-06 |
Identity: 88.46% |
Span: 78bp (13.3%) |
Frame: -2 |
| gi|7384996|gb|AAF61634.1| lacZ [Cloning vector pTG8] |
| Match: gi|50912019|ref|XP_467417.1| |
score: 54.3 |
e-value: 2e-19 |
Identity: 43.48% |
Span: 207bp (35.2%) |
Frame: 1 |
| putative |
| Match: gi|38385703|gb|AAR19394.1| |
score: 50.8 |
e-value: 0.0001 |
Identity: 95.45% |
Span: 66bp (11.2%) |
Frame: -2 |
| gi|38385703|gb|AAR19394.1| modified lacZ' [Cloning vector pTA6] |
| Match: gi|23308351|gb|AAN18145.1| |
score: 49.7 |
e-value: 2e-16 |
Identity: 47.69% |
Span: 195bp (33.2%) |
Frame: 1 |
| At1g13220/F3F19_25 |
| Match: gi|18391488|ref|NP_563923.1| |
score: 49.7 |
e-value: 9e-17 |
Identity: 47.69% |
Span: 195bp (33.2%) |
Frame: 1 |
| LINC2 (LITTLE NUCLEI2) [Arabidopsis thaliana] |
| Match: gi|18391490|ref|NP_563924.1| |
score: 49.7 |
e-value: 9e-17 |
Identity: 47.69% |
Span: 195bp (33.2%) |
Frame: 1 |
| LINC2 (LITTLE NUCLEI2) [Arabidopsis thaliana] >gi4850405|gb|AAD31075.1|AC007357_24 Similar to gb|D64087 nuclear matri... |
| Match: gi|2190187|dbj|BAA20407.1| |
score: 49.7 |
e-value: 2e-18 |
Identity: 46.38% |
Span: 207bp (35.2%) |
Frame: 1 |
| nuclear matrix constituent protein 1 [Daucus carota] |
| Match: gi|15239130|ref|NP_201378.1| |
score: 47.8 |
e-value: 6e-30 |
Identity: 46.38% |
Span: 207bp (35.2%) |
Frame: 1 |
| gi|15239130|ref|NP_201378.1| nuclear matrix constituent protein 1 (NMCP1)-related [Arabidopsis thaliana] gi|26397174|... |
| Match: gi|2827709|emb|CAA16682.1| |
score: 47.8 |
e-value: 6e-30 |
Identity: 46.38% |
Span: 207bp (35.2%) |
Frame: 1 |
| gi|2827709|emb|CAA16682.1| predicted protein [Arabidopsis thaliana] >gi|7486519|pir||T05892 hypothetical protein F6H1... |
| Match: gi|9828634|gb|AAG00257.1| |
score: 44.3 |
e-value: 2e-17 |
Identity: 43.48% |
Span: 207bp (35.2%) |
Frame: 1 |
| gi|9828634|gb|AAG00257.1| F1N21.5 [Arabidopsis thaliana] |
| Match: gi|15220369|ref|NP_176892.1| |
score: 43.1 |
e-value: 2e-16 |
Identity: 42.03% |
Span: 207bp (35.2%) |
Frame: 1 |
| LINC1 (LITTLE NUCLEI1) [Arabidopsis thaliana] |
| Match: gi|110741402|dbj|BAF02250.1| |
score: 43.1 |
e-value: 2e-16 |
Identity: 42.03% |
Span: 207bp (35.2%) |
Frame: 1 |
| hypothetical protein [Arabidopsis thaliana] |
|
| 14 lower scoring hits censored -- only 31 best hits are stored. |
