genbank/nr [blastx] | Showing best 25 hits recorded |
Match: gi|18402837|ref|NP_565733.1| |
score: 112 |
e-value: 4e-49 |
Identity: 96.49% |
Span: 171bp (29.0%) |
Frame: -2 |
RAD50; ATP binding / nuclease/ zinc ion binding [Arabidopsis thaliana] >gi57013013|sp|Q9SL02.2|RAD50_ARATH RecName: F... |
Match: gi|225433512|ref|XP_002266665.1| |
score: 111 |
e-value: 1e-49 |
Identity: 92.86% |
Span: 168bp (28.5%) |
Frame: -1 |
PREDICTED: hypothetical protein [Vitis vinifera] |
Match: gi|224060335|ref|XP_002300148.1| |
score: 110 |
e-value: 4e-49 |
Identity: 94.74% |
Span: 171bp (29.0%) |
Frame: -2 |
predicted protein [Populus trichocarpa] >gi222847406|gb|EEE84953.1| predicted protein [Populus trichocarpa] |
Match: gi|224060335|ref|XP_002300148.1| |
score: 110 |
e-value: 4e-49 |
Identity: 91.07% |
Span: 168bp (28.5%) |
Frame: -1 |
predicted protein [Populus trichocarpa] >gi222847406|gb|EEE84953.1| predicted protein [Populus trichocarpa] |
Match: gi|222622903|gb|EEE57035.1| |
score: 110 |
e-value: 1e-46 |
Identity: 94.74% |
Span: 171bp (29.0%) |
Frame: -2 |
hypothetical protein OsJ_06817 [Oryza sativa Japonica Group] |
Match: gi|242065154|ref|XP_002453866.1| |
score: 110 |
e-value: 2e-45 |
Identity: 94.74% |
Span: 171bp (29.0%) |
Frame: -2 |
hypothetical protein SORBIDRAFT_04g020090 [Sorghum bicolor] >gi241933697|gb|EES06842.1| hypothetical protein SORBIDRA... |
Match: gi|225433512|ref|XP_002266665.1| |
score: 110 |
e-value: 1e-49 |
Identity: 94.74% |
Span: 171bp (29.0%) |
Frame: -2 |
PREDICTED: hypothetical protein [Vitis vinifera] |
Match: gi|218190791|gb|EEC73218.1| |
score: 110 |
e-value: 1e-46 |
Identity: 94.74% |
Span: 171bp (29.0%) |
Frame: -2 |
hypothetical protein OsI_07303 [Oryza sativa Indica Group] |
Match: gi|115446227|ref|NP_001046893.1| |
score: 110 |
e-value: 1e-46 |
Identity: 94.74% |
Span: 171bp (29.0%) |
Frame: -2 |
Os02g0497500 [Oryza sativa (japonica cultivar-group)] >gi41056568|gb|AAP34688.2| DNA repair-recombination protein [Or... |
Match: gi|18402837|ref|NP_565733.1| |
score: 107 |
e-value: 4e-49 |
Identity: 91.07% |
Span: 168bp (28.5%) |
Frame: -1 |
RAD50; ATP binding / nuclease/ zinc ion binding [Arabidopsis thaliana] >gi57013013|sp|Q9SL02.2|RAD50_ARATH RecName: F... |
Match: gi|157863726|gb|ABV90884.1| |
score: 106 |
e-value: 3e-44 |
Identity: 91.23% |
Span: 171bp (29.0%) |
Frame: -2 |
DNA repair protein Rad50 [Aegilops tauschii] |
Match: gi|157863730|gb|ABV90886.1| |
score: 106 |
e-value: 3e-44 |
Identity: 91.23% |
Span: 171bp (29.0%) |
Frame: -2 |
DNA repair protein Rad50 [Triticum turgidum] |
Match: gi|157863722|gb|ABV90882.1| |
score: 106 |
e-value: 3e-44 |
Identity: 91.23% |
Span: 171bp (29.0%) |
Frame: -2 |
DNA repair protein Rad50 [Triticum turgidum] |
Match: gi|157863720|gb|ABV90881.1| |
score: 106 |
e-value: 2e-44 |
Identity: 91.23% |
Span: 171bp (29.0%) |
Frame: -2 |
DNA repair protein Rad50 [Triticum turgidum] |
Match: gi|157863724|gb|ABV90883.1| |
score: 106 |
e-value: 3e-44 |
Identity: 91.23% |
Span: 171bp (29.0%) |
Frame: -2 |
DNA repair protein Rad50 [Triticum monococcum] |
Match: gi|157863728|gb|ABV90885.1| |
score: 106 |
e-value: 2e-44 |
Identity: 91.23% |
Span: 171bp (29.0%) |
Frame: -2 |
DNA repair protein Rad50 [Triticum turgidum] |
Match: gi|115446227|ref|NP_001046893.1| |
score: 100 |
e-value: 1e-46 |
Identity: 85.71% |
Span: 168bp (28.5%) |
Frame: -1 |
Os02g0497500 [Oryza sativa (japonica cultivar-group)] >gi41056568|gb|AAP34688.2| DNA repair-recombination protein [Or... |
Match: gi|222622903|gb|EEE57035.1| |
score: 100 |
e-value: 1e-46 |
Identity: 85.71% |
Span: 168bp (28.5%) |
Frame: -1 |
hypothetical protein OsJ_06817 [Oryza sativa Japonica Group] |
Match: gi|218190791|gb|EEC73218.1| |
score: 100 |
e-value: 1e-46 |
Identity: 85.71% |
Span: 168bp (28.5%) |
Frame: -1 |
hypothetical protein OsI_07303 [Oryza sativa Indica Group] |
Match: gi|157863720|gb|ABV90881.1| |
score: 98.2 |
e-value: 2e-44 |
Identity: 83.93% |
Span: 168bp (28.5%) |
Frame: -1 |
DNA repair protein Rad50 [Triticum turgidum] |
Match: gi|157863728|gb|ABV90885.1| |
score: 98.2 |
e-value: 2e-44 |
Identity: 83.93% |
Span: 168bp (28.5%) |
Frame: -1 |
DNA repair protein Rad50 [Triticum turgidum] |
Match: gi|157863726|gb|ABV90884.1| |
score: 97.8 |
e-value: 3e-44 |
Identity: 83.93% |
Span: 168bp (28.5%) |
Frame: -1 |
DNA repair protein Rad50 [Aegilops tauschii] |
Match: gi|157863730|gb|ABV90886.1| |
score: 97.8 |
e-value: 3e-44 |
Identity: 83.93% |
Span: 168bp (28.5%) |
Frame: -1 |
DNA repair protein Rad50 [Triticum turgidum] |
Match: gi|157863724|gb|ABV90883.1| |
score: 97.8 |
e-value: 3e-44 |
Identity: 83.93% |
Span: 168bp (28.5%) |
Frame: -1 |
DNA repair protein Rad50 [Triticum monococcum] |
Match: gi|242065154|ref|XP_002453866.1| |
score: 97.1 |
e-value: 2e-45 |
Identity: 82.14% |
Span: 168bp (28.5%) |
Frame: -1 |
hypothetical protein SORBIDRAFT_04g020090 [Sorghum bicolor] >gi241933697|gb|EES06842.1| hypothetical protein SORBIDRA... |
|
356 lower scoring hits censored -- only 25 best hits are stored. |
arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
Match: At2G31970.1 |
score: 112 |
e-value: 2e-51 |
Identity: 96.49% |
Span: 171bp (29.0%) |
Frame: -2 |
Symbols: ATRAD50, RAD50 | RAD50; ATP binding / ATPase/ nuclease/ zinc ion binding | chr2:13607734-13615892 FORWARD |
Match: At2G31970.1 |
score: 107 |
e-value: 2e-51 |
Identity: 91.07% |
Span: 168bp (28.5%) |
Frame: -1 |
Symbols: ATRAD50, RAD50 | RAD50; ATP binding / ATPase/ nuclease/ zinc ion binding | chr2:13607734-13615892 FORWARD |
|
swissprot [blastx] | Showing best 22 hits recorded |
Match: Q9SL02 |
score: 112 |
e-value: 3e-50 |
Identity: 96.49% |
Span: 171bp (29.0%) |
Frame: -2 |
DNA repair protein RAD50 OS=Arabidopsis thaliana GN=RAD50 PE=1 SV=2 |
Match: Q9SL02 |
score: 107 |
e-value: 3e-50 |
Identity: 91.07% |
Span: 168bp (28.5%) |
Frame: -1 |
DNA repair protein RAD50 OS=Arabidopsis thaliana GN=RAD50 PE=1 SV=2 |
Match: Q9JIL8 |
score: 103 |
e-value: 4e-31 |
Identity: 89.47% |
Span: 171bp (29.0%) |
Frame: -2 |
DNA repair protein RAD50 OS=Rattus norvegicus GN=Rad50 PE=1 SV=1 |
Match: P70388 |
score: 103 |
e-value: 5e-31 |
Identity: 89.47% |
Span: 171bp (29.0%) |
Frame: -2 |
DNA repair protein RAD50 OS=Mus musculus GN=Rad50 PE=1 SV=1 |
Match: Q92878 |
score: 102 |
e-value: 7e-31 |
Identity: 87.72% |
Span: 171bp (29.0%) |
Frame: -2 |
DNA repair protein RAD50 OS=Homo sapiens GN=RAD50 PE=1 SV=1 |
Match: Q54CS9 |
score: 92.8 |
e-value: 2e-31 |
Identity: 77.19% |
Span: 171bp (29.0%) |
Frame: -2 |
DNA repair protein RAD50 OS=Dictyostelium discoideum GN=rad50 PE=3 SV=1 |
Match: P12753 |
score: 89 |
e-value: 1e-25 |
Identity: 75.44% |
Span: 171bp (29.0%) |
Frame: -2 |
DNA repair protein RAD50 OS=Saccharomyces cerevisiae GN=RAD50 PE=1 SV=1 |
Match: Q9UTJ8 |
score: 87.4 |
e-value: 4e-26 |
Identity: 75.44% |
Span: 171bp (29.0%) |
Frame: -2 |
DNA repair protein rad50 OS=Schizosaccharomyces pombe GN=rad50 PE=1 SV=3 |
Match: Q9W252 |
score: 86.7 |
e-value: 2e-23 |
Identity: 75.44% |
Span: 171bp (29.0%) |
Frame: -2 |
DNA repair protein RAD50 OS=Drosophila melanogaster GN=rad50 PE=1 SV=3 |
Match: C6KSQ6 |
score: 84.7 |
e-value: 2e-21 |
Identity: 70.18% |
Span: 171bp (29.0%) |
Frame: -2 |
Probable DNA repair protein RAD50 OS=Plasmodium falciparum (isolate 3D7) GN=PFF0285c PE=3 SV=1 |
Match: Q8SRK6 |
score: 78.6 |
e-value: 2e-19 |
Identity: 64.91% |
Span: 171bp (29.0%) |
Frame: -2 |
DNA repair protein RAD50 OS=Encephalitozoon cuniculi GN=RAD50 PE=1 SV=1 |
Match: O44199 |
score: 74.3 |
e-value: 5e-16 |
Identity: 76.09% |
Span: 138bp (23.4%) |
Frame: -2 |
DNA repair protein rad-50 OS=Caenorhabditis elegans GN=rad-50 PE=2 SV=1 |
Match: Q54CS9 |
score: 63.9 |
e-value: 2e-31 |
Identity: 50.94% |
Span: 159bp (26.9%) |
Frame: -1 |
DNA repair protein RAD50 OS=Dictyostelium discoideum GN=rad50 PE=3 SV=1 |
Match: Q92878 |
score: 52.8 |
e-value: 7e-31 |
Identity: 48.98% |
Span: 147bp (24.9%) |
Frame: -1 |
DNA repair protein RAD50 OS=Homo sapiens GN=RAD50 PE=1 SV=1 |
Match: Q9JIL8 |
score: 52.8 |
e-value: 4e-31 |
Identity: 44.44% |
Span: 162bp (27.5%) |
Frame: -1 |
DNA repair protein RAD50 OS=Rattus norvegicus GN=Rad50 PE=1 SV=1 |
Match: P70388 |
score: 52.4 |
e-value: 5e-31 |
Identity: 46.94% |
Span: 147bp (24.9%) |
Frame: -1 |
DNA repair protein RAD50 OS=Mus musculus GN=Rad50 PE=1 SV=1 |
Match: Q9UTJ8 |
score: 51.6 |
e-value: 4e-26 |
Identity: 46.94% |
Span: 147bp (24.9%) |
Frame: -1 |
DNA repair protein rad50 OS=Schizosaccharomyces pombe GN=rad50 PE=1 SV=3 |
Match: P12753 |
score: 48.5 |
e-value: 1e-25 |
Identity: 41.51% |
Span: 159bp (26.9%) |
Frame: -1 |
DNA repair protein RAD50 OS=Saccharomyces cerevisiae GN=RAD50 PE=1 SV=1 |
Match: Q9W252 |
score: 43.1 |
e-value: 2e-23 |
Identity: 38.46% |
Span: 156bp (26.4%) |
Frame: -1 |
DNA repair protein RAD50 OS=Drosophila melanogaster GN=rad50 PE=1 SV=3 |
Match: C6KSQ6 |
score: 38.9 |
e-value: 2e-21 |
Identity: 40.82% |
Span: 147bp (24.9%) |
Frame: -1 |
Probable DNA repair protein RAD50 OS=Plasmodium falciparum (isolate 3D7) GN=PFF0285c PE=3 SV=1 |
Match: Q8SRK6 |
score: 37.7 |
e-value: 2e-19 |
Identity: 34.55% |
Span: 165bp (28.0%) |
Frame: -1 |
DNA repair protein RAD50 OS=Encephalitozoon cuniculi GN=RAD50 PE=1 SV=1 |
Match: O44199 |
score: 30.8 |
e-value: 5e-16 |
Identity: 38.46% |
Span: 117bp (19.8%) |
Frame: -1 |
DNA repair protein rad-50 OS=Caenorhabditis elegans GN=rad-50 PE=2 SV=1 |
|