| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|34393486|dbj|BAC83046.1| |
score: 106.7 |
e-value: 2.1e-22 |
Identity: 55.95% |
Span: 252bp (42.5%) |
Frame: 2 |
| putative RRM RNA binding protein NSAP1 [Oryza sativa Japonica Group] |
| Match: gi|34901412|ref|NP_912052.1| |
score: 82.03 |
e-value: 5.6e-15 |
Identity: 48.78% |
Span: 246bp (41.5%) |
Frame: 2 |
| gi|34901412|ref|NP_912052.1| OSJNBa0075N02.12 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34395354|dbj|BAC84424.1| |
score: 82.03 |
e-value: 5.6e-15 |
Identity: 48.78% |
Span: 246bp (41.5%) |
Frame: 2 |
| gi|34395354|dbj|BAC84424.1| water-stress protein-like protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|22655529|gb|AAN04093.1| |
score: 76.64 |
e-value: 2.4e-13 |
Identity: 38.1% |
Span: 252bp (42.5%) |
Frame: 2 |
| gi|22655529|gb|AAN04093.1| water-stress protein [Zea mays] |
| Match: gi|38345947|emb|CAE04271.2| |
score: 76.64 |
e-value: 2.4e-13 |
Identity: 36.9% |
Span: 252bp (42.5%) |
Frame: 2 |
| gi|38345947|emb|CAE04271.2| OSJNBb0103I08.18 [Oryza sativa (japonica cultivar-group)] gi|38345949|emb|CAE04337.2| OSJ... |
| Match: gi|37359248|gb|AAN77868.1| |
score: 74.33 |
e-value: 1.2e-12 |
Identity: 35.8% |
Span: 243bp (41.0%) |
Frame: 2 |
| putative heterogeneous nuclear ribonucleoprotein [Vitis vinifera] |
| Match: gi|30689808|ref|NP_850422.1| |
score: 69.71 |
e-value: 2.9e-11 |
Identity: 33.71% |
Span: 267bp (45.0%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi20147226|gb|AAM10328.1| At2g44720/F16B22.21 ... |
| Match: gi|7485542|pir||T01598 |
score: 62.39 |
e-value: 4.6e-09 |
Identity: 42.42% |
Span: 198bp (33.4%) |
Frame: 2 |
| gi|7485542|pir||T01598 hypothetical protein At2g44710 [imported] - Arabidopsis thaliana gi|3341691|gb|AAC27473.1| put... |
| Match: gi|1079438|pir||S53710 |
score: 57 |
e-value: 1.9e-07 |
Identity: 38.16% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|1079438|pir||S53710 ribonucleoprotein - chicken gi|550458|gb|AAA68014.1| ribonucleoprotein gi|1095499|prf||2109229... |
| Match: gi|4758542|ref|NP_004490.1| |
score: 56.61 |
e-value: 2.5e-07 |
Identity: 38.27% |
Span: 243bp (41.0%) |
Frame: 2 |
| gi|4758542|ref|NP_004490.1| heterogeneous nuclear ribonucleoprotein AB isoform b; hnRNP type A/B protein; apolipoprot... |
| Match: gi|14110404|ref|NP_112556.1| |
score: 56.61 |
e-value: 2.5e-07 |
Identity: 38.27% |
Span: 243bp (41.0%) |
Frame: 2 |
| gi|14110404|ref|NP_112556.1| heterogeneous nuclear ribonucleoprotein AB isoform a; hnRNP type A/B protein; apolipopro... |
| Match: gi|1362731|pir||S56751 |
score: 56.61 |
e-value: 2.5e-07 |
Identity: 38.16% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|1362731|pir||S56751 single stranded D box binding factor 1 - chicken gi|515838|emb|CAA56586.1| single stranded D b... |
| Match: gi|1362732|pir||S56750 |
score: 56.61 |
e-value: 2.5e-07 |
Identity: 38.16% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|1362732|pir||S56750 single stranded D box binding factor 2 - chicken |
| Match: gi|5052976|gb|AAD38787.1| |
score: 55.07 |
e-value: 7.4e-07 |
Identity: 38.16% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|5052976|gb|AAD38787.1| hnRNP A/B related protein [Felis catus] |
| Match: gi|12803583|gb|AAH02625.1| |
score: 54.3 |
e-value: 1.3e-06 |
Identity: 38.16% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|12803583|gb|AAH02625.1| HNRPAB protein [Homo sapiens] gi|13528732|gb|AAH04561.1| HNRPAB protein [Homo sapiens] gi|... |
| Match: gi|21757498|dbj|BAC05134.1| |
score: 54.3 |
e-value: 1.3e-06 |
Identity: 38.16% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|21757498|dbj|BAC05134.1| unnamed protein product [Homo sapiens] gi|33874222|gb|AAH36708.1| HNRPAB protein [Homo sa... |
| Match: gi|14388456|dbj|BAB60767.1| |
score: 53.91 |
e-value: 1.6e-06 |
Identity: 38.16% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|14388456|dbj|BAB60767.1| hypothetical protein [Macaca fascicularis] |
| Match: gi|6671602|ref|NP_031542.1| |
score: 53.91 |
e-value: 1.6e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|6671602|ref|NP_031542.1| heterogeneous nuclear ribonucleoprotein D; AU-rich element RNA-binding protein 1 [Mus mus... |
| Match: gi|133262|sp|P17132|ROC_RAT |
score: 53.53 |
e-value: 2.2e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|133262|sp|P17132|ROC_RAT Heterogeneous nuclear ribonucleoprotein C (hnRNP C) (hnRNP core protein C) gi|92370|pir||... |
| Match: gi|2773158|gb|AAB96683.1| |
score: 53.53 |
e-value: 2.2e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|2773158|gb|AAB96683.1| heterogeneous nuclear ribonucleoprotein D0B [Homo sapiens] |
| Match: gi|9588100|dbj|BAB03467.1| |
score: 53.53 |
e-value: 2.2e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|9588100|dbj|BAB03467.1| RNA binding protein p40 AUF1 [Rattus norvegicus] |
| Match: gi|14110420|ref|NP_112738.1| |
score: 53.53 |
e-value: 2.2e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|14110420|ref|NP_112738.1| heterogeneous nuclear ribonucleoprotein D isoform a; AU-rich element RNA-binding protein... |
| Match: gi|33516945|sp|Q60668|ROD_MOUSE |
score: 53.53 |
e-value: 2.2e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|33516945|sp|Q60668|ROD_MOUSE Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) (AU-rich element RNA-binding pr... |
| Match: gi|870743|dbj|BAA09522.1| |
score: 53.53 |
e-value: 2.2e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|870743|dbj|BAA09522.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens] |
| Match: gi|14110417|ref|NP_112737.1| |
score: 53.53 |
e-value: 2.2e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|14110417|ref|NP_112737.1| heterogeneous nuclear ribonucleoprotein D isoform b; AU-rich element RNA-binding protein... |
| Match: gi|3747052|gb|AAC77437.1| |
score: 53.53 |
e-value: 2.2e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|3747052|gb|AAC77437.1| estrogen response element binding protein [Saguinus oedipus] |
| Match: gi|14110414|ref|NP_002129.2| |
score: 53.53 |
e-value: 2.2e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|14110414|ref|NP_002129.2| heterogeneous nuclear ribonucleoprotein D isoform c; AU-rich element RNA-binding protein... |
| Match: gi|29145079|gb|AAH49098.1| |
score: 53.53 |
e-value: 2.2e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|29145079|gb|AAH49098.1| Hnrpd protein [Mus musculus] |
| Match: gi|9588102|dbj|BAB03468.1| |
score: 53.53 |
e-value: 2.2e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|9588102|dbj|BAB03468.1| RNA binding protein p37 AUF1 [Rattus norvegicus] |
| Match: gi|15029896|gb|AAH11172.1| |
score: 53.53 |
e-value: 2.2e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|15029896|gb|AAH11172.1| Hnrpd protein [Mus musculus] |
| Match: gi|433344|gb|AAC50056.1| |
score: 53.53 |
e-value: 2.2e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|433344|gb|AAC50056.1| p37 AUF1 |
| Match: gi|9588098|dbj|BAB03466.1| |
score: 53.53 |
e-value: 2.2e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|9588098|dbj|BAB03466.1| RNA binding protein p42 AUF1 [Rattus norvegicus] |
| Match: gi|1082775|pir||A54601 |
score: 53.53 |
e-value: 2.2e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|1082775|pir||A54601 RNA-binding protein AUF1 - human |
| Match: gi|13242324|ref|NP_077380.1| |
score: 53.53 |
e-value: 2.2e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|13242324|ref|NP_077380.1| RNA binding protein p45AUF1 [Rattus norvegicus] gi|13124487|sp|Q9JJ54|ROD_RAT Heterogene... |
| Match: gi|870747|dbj|BAA09524.1| |
score: 53.53 |
e-value: 2.2e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|870747|dbj|BAA09524.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens] |
| Match: gi|37531426|ref|NP_920015.1| |
score: 52.76 |
e-value: 3.7e-06 |
Identity: 30.83% |
Span: 327bp (55.1%) |
Frame: 2 |
| gi|37531426|ref|NP_920015.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] gi|22655766|gb|AAN04183.1|... |
| Match: gi|12851175|dbj|BAB28963.1| |
score: 52.37 |
e-value: 4.8e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|12851175|dbj|BAB28963.1| unnamed protein product [Mus musculus] |
| Match: gi|4378711|gb|AAD19638.1| |
score: 52.37 |
e-value: 4.8e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|4378711|gb|AAD19638.1| nucleic acid binding factor pRM10 [Rattus norvegicus] |
| Match: gi|13786156|ref|NP_112620.1| |
score: 52.37 |
e-value: 4.8e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|13786156|ref|NP_112620.1| heterogeneous nuclear ribonucleoprotein A/B [Rattus norvegicus] gi|3377279|dbj|BAA32032.... |
| Match: gi|6562847|emb|CAB62554.1| |
score: 52.37 |
e-value: 4.8e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|6562847|emb|CAB62554.1| heterogeneous nuclear ribonucleoprotein; type A/B hnRNP p38 [Rattus norvegicus] gi|6911221... |
| Match: gi|6754222|ref|NP_034578.1| |
score: 52.37 |
e-value: 4.8e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|6754222|ref|NP_034578.1| heterogeneous nuclear ribonucleoprotein A/B [Mus musculus] gi|729000|sp|Q99020|ROAA_MOUSE... |
| Match: gi|26345118|dbj|BAC36208.1| |
score: 52.37 |
e-value: 4.8e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|26345118|dbj|BAC36208.1| unnamed protein product [Mus musculus] |
| Match: gi|27695334|gb|AAH43069.1| |
score: 52.37 |
e-value: 4.8e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|27695334|gb|AAH43069.1| Hnrpab protein [Mus musculus] |
| Match: gi|6562845|emb|CAB62553.1| |
score: 52.37 |
e-value: 4.8e-06 |
Identity: 36.84% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|6562845|emb|CAB62553.1| heterogeneous nuclear ribonucleoprotein; type A/B hnRNP p40 [Rattus norvegicus] |
| Match: gi|34876235|ref|XP_223190.2| |
score: 51.22 |
e-value: 1.1e-05 |
Identity: 31.65% |
Span: 237bp (40.0%) |
Frame: 2 |
| gi|34876235|ref|XP_223190.2| similar to heterogeneous nuclear ribonucleoprotein D-like; A+U-rich element RNA binding ... |
| Match: gi|38327502|gb|AAR17782.1| |
score: 51.22 |
e-value: 1.1e-05 |
Identity: 31.65% |
Span: 237bp (40.0%) |
Frame: 2 |
| gi|38327502|gb|AAR17782.1| CArG binding factor [Homo sapiens] |
| Match: gi|7710036|ref|NP_057899.1| |
score: 51.22 |
e-value: 1.1e-05 |
Identity: 31.65% |
Span: 237bp (40.0%) |
Frame: 2 |
| gi|7710036|ref|NP_057899.1| heterogeneous nuclear ribonucleoprotein D-like [Mus musculus] gi|4514631|dbj|BAA75479.1| ... |
| Match: gi|7446333|pir||JW0079 |
score: 51.22 |
e-value: 1.1e-05 |
Identity: 31.65% |
Span: 237bp (40.0%) |
Frame: 2 |
| gi|7446333|pir||JW0079 heterogeneous nuclear ribonucleoprotein homolog JKTBP [imported] - human gi|2780748|dbj|BAA243... |
| Match: gi|420052|pir||A44192 |
score: 51.22 |
e-value: 1.1e-05 |
Identity: 35.53% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|420052|pir||A44192 heterogeneous nuclear ribonucleoprotein C-like protein - human |
| Match: gi|181914|gb|AAA35781.1| |
score: 51.22 |
e-value: 1.1e-05 |
Identity: 35.53% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|181914|gb|AAA35781.1| DNA-binding protein |
| Match: gi|2547076|dbj|BAA22860.1| |
score: 51.22 |
e-value: 1.1e-05 |
Identity: 31.65% |
Span: 237bp (40.0%) |
Frame: 2 |
| gi|2547076|dbj|BAA22860.1| A+U-rich element RNA binding factor [Homo sapiens] |
| Match: gi|15010818|dbj|BAB62188.1| |
score: 51.22 |
e-value: 1.1e-05 |
Identity: 31.65% |
Span: 237bp (40.0%) |
Frame: 2 |
| gi|15010818|dbj|BAB62188.1| JKTBP1delta6 [Homo sapiens] |
| Match: gi|4885423|ref|NP_005454.1| |
score: 51.22 |
e-value: 1.1e-05 |
Identity: 31.65% |
Span: 237bp (40.0%) |
Frame: 2 |
| gi|4885423|ref|NP_005454.1| heterogeneous nuclear ribonucleoprotein D-like; A+U-rich element RNA binding factor [Homo... |
| Match: gi|29124621|gb|AAH48898.1| |
score: 50.06 |
e-value: 2.4e-05 |
Identity: 32.88% |
Span: 210bp (35.4%) |
Frame: 2 |
| gi|29124621|gb|AAH48898.1| Similar to heterogeneous nuclear ribonucleoprotein A/B [Danio rerio] |
| Match: gi|33416353|gb|AAH55525.1| |
score: 49.68 |
e-value: 3.1e-05 |
Identity: 33.33% |
Span: 234bp (39.5%) |
Frame: 2 |
| gi|33416353|gb|AAH55525.1| Unknown (protein for MGC:66169) [Danio rerio] |
| Match: gi|22218793|pdb|1IQT|A |
score: 49.29 |
e-value: 4.1e-05 |
Identity: 39.39% |
Span: 198bp (33.4%) |
Frame: 2 |
| gi|22218793|pdb|1IQT|A Chain A, Solution Structure Of The C-Terminal Rna-Binding Domain Of Heterogeneous Nuclear Ribo... |
| Match: gi|28175291|gb|AAH45124.1| |
score: 49.29 |
e-value: 4.1e-05 |
Identity: 32.91% |
Span: 237bp (40.0%) |
Frame: 2 |
| gi|28175291|gb|AAH45124.1| MGC53310 protein [Xenopus laevis] |
| Match: gi|21554348|gb|AAM63455.1| |
score: 48.52 |
e-value: 6.9e-05 |
Identity: 31.73% |
Span: 312bp (52.6%) |
Frame: 2 |
| gi|21554348|gb|AAM63455.1| unknown [Arabidopsis thaliana] |
| Match: gi|7506587|pir||T24148 |
score: 48.14 |
e-value: 9e-05 |
Identity: 32.5% |
Span: 240bp (40.5%) |
Frame: 2 |
| gi|7506587|pir||T24148 hypothetical protein R10E9.1 - Caenorhabditis elegans |
| Match: gi|27694771|gb|AAH43814.1| |
score: 48.14 |
e-value: 9e-05 |
Identity: 34.78% |
Span: 207bp (34.9%) |
Frame: 2 |
| gi|27694771|gb|AAH43814.1| Hnrpab-prov protein [Xenopus laevis] |
| Match: gi|17532863|ref|NP_496057.1| |
score: 48.14 |
e-value: 9e-05 |
Identity: 35.53% |
Span: 228bp (38.4%) |
Frame: 2 |
| gi|17532863|ref|NP_496057.1| EXCretory canal abnormal EXC-7, ELAV type RNA binding protein (48.7 kD) (exc-7) [Caenorh... |
| Match: gi|17554332|ref|NP_497799.1| |
score: 48.14 |
e-value: 9e-05 |
Identity: 32.5% |
Span: 240bp (40.5%) |
Frame: 2 |
| gi|17554332|ref|NP_497799.1| MaSashi, fly neural family, RNA-binding protein involved in male mating behaviour (35.5 ... |
| Match: gi|34909850|ref|NP_916272.1| |
score: 47.37 |
e-value: 0.00015 |
Identity: 26.37% |
Span: 273bp (46.0%) |
Frame: 2 |
| gi|34909850|ref|NP_916272.1| OSJNBb0053G03.6 [Oryza sativa (japonica cultivar-group)] gi|22535582|dbj|BAC10757.1| OSJ... |
| Match: gi|18415425|ref|NP_567594.1| |
score: 46.98 |
e-value: 0.0002 |
Identity: 34.02% |
Span: 291bp (49.1%) |
Frame: 2 |
| gi|18415425|ref|NP_567594.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
| Match: gi|2951777|dbj|BAA25105.1| |
score: 46.98 |
e-value: 0.0002 |
Identity: 51.16% |
Span: 129bp (21.8%) |
Frame: 2 |
| gi|2951777|dbj|BAA25105.1| translation initiation factor 3 [Schizosaccharomyces pombe] |
| Match: gi|7485727|pir||T04887 |
score: 46.98 |
e-value: 0.0002 |
Identity: 34.02% |
Span: 291bp (49.1%) |
Frame: 2 |
| gi|7485727|pir||T04887 hypothetical protein F18F4.130 - Arabidopsis thaliana gi|2827657|emb|CAA16611.1| putative prot... |
| Match: gi|12856118|dbj|BAB30571.1| |
score: 46.98 |
e-value: 0.0002 |
Identity: 30.43% |
Span: 267bp (45.0%) |
Frame: 2 |
| gi|12856118|dbj|BAB30571.1| unnamed protein product [Mus musculus] |
| Match: gi|19112519|ref|NP_595727.1| |
score: 46.98 |
e-value: 0.0002 |
Identity: 51.16% |
Span: 129bp (21.8%) |
Frame: 2 |
| gi|19112519|ref|NP_595727.1| eukaryotic translation initiation factor 3 rna-binding subunit [Schizosaccharomyces pomb... |
| Match: gi|1749496|dbj|BAA13806.1| |
score: 46.98 |
e-value: 0.0002 |
Identity: 51.16% |
Span: 129bp (21.8%) |
Frame: 2 |
| gi|1749496|dbj|BAA13806.1| similar to Saccharomyces cerevisiae no definition line found, GENEBANK Accession Number U3... |
| Match: gi|11034807|gb|AAG27092.1| |
score: 46.59 |
e-value: 0.00026 |
Identity: 33.71% |
Span: 258bp (43.5%) |
Frame: 2 |
| gi|11034807|gb|AAG27092.1| RNA-binding protein Y14 [Xenopus laevis] |
| Match: gi|34784590|gb|AAH56659.1| |
score: 46.59 |
e-value: 0.00026 |
Identity: 33.71% |
Span: 258bp (43.5%) |
Frame: 2 |
| gi|34784590|gb|AAH56659.1| MGC68591 protein [Xenopus laevis] |
| Match: gi|17136828|ref|NP_476936.1| |
score: 46.21 |
e-value: 0.00034 |
Identity: 31.25% |
Span: 240bp (40.5%) |
Frame: 2 |
| gi|17136828|ref|NP_476936.1| RNA-binding protein 9 CG3151-PD [Drosophila melanogaster] gi|19549690|ref|NP_599125.1| R... |
| Match: gi|7322081|gb|AAB25519.2| |
score: 46.21 |
e-value: 0.00034 |
Identity: 31.25% |
Span: 240bp (40.5%) |
Frame: 2 |
| gi|7322081|gb|AAB25519.2| RRM9 [Drosophila melanogaster] |
| Match: gi|17136830|ref|NP_476937.1| |
score: 46.21 |
e-value: 0.00034 |
Identity: 31.25% |
Span: 240bp (40.5%) |
Frame: 2 |
| gi|17136830|ref|NP_476937.1| RNA-binding protein 9 CG3151-PA [Drosophila melanogaster] gi|19549688|ref|NP_599124.1| R... |
| Match: gi|133276|sp|P07029|ROU2_HUMAN |
score: 45.44 |
e-value: 0.00059 |
Identity: 45% |
Span: 120bp (20.2%) |
Frame: 2 |
| gi|133276|sp|P07029|ROU2_HUMAN Heterogeneous nuclear ribonucleoprotein UP2 gi|87654|pir||A24016 heterogeneous ribonuc... |
| Match: gi|34906598|ref|NP_914646.1| |
score: 44.67 |
e-value: 0.001 |
Identity: 28.43% |
Span: 306bp (51.6%) |
Frame: 2 |
| gi|34906598|ref|NP_914646.1| putative RNA-binding like protein [Oryza sativa (japonica cultivar-group)] gi|15290173|d... |
| Match: gi|37531426|ref|NP_920015.1| |
score: 44.28 |
e-value: 0.001 |
Identity: 33.33% |
Span: 261bp (44.0%) |
Frame: 2 |
| gi|37531426|ref|NP_920015.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] gi|22655766|gb|AAN04183.1|... |
| Match: gi|25456498|pir||T52461 |
score: 43.9 |
e-value: 0.002 |
Identity: 30.34% |
Span: 267bp (45.0%) |
Frame: 2 |
| gi|25456498|pir||T52461 RNA binding protein [imported] - Arabidopsis thaliana gi|6566348|dbj|BAA88269.1| RNA binding ... |
| Match: gi|15217975|ref|NP_176143.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 30.34% |
Span: 267bp (45.0%) |
Frame: 2 |
| ATRBP1 (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 1); RNA binding / single-stranded RNA binding [Arabidopsis thaliana]... |
| Match: gi|15217573|ref|NP_177322.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 37.74% |
Span: 159bp (26.8%) |
Frame: 2 |
| gi|15217573|ref|NP_177322.1| polyadenylate-binding protein 5 (PABP5) [Arabidopsis thaliana] gi|21542448|sp|Q05196|PAB... |
| Match: gi|166786|gb|AAA32832.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 37.74% |
Span: 159bp (26.8%) |
Frame: 2 |
| gi|166786|gb|AAA32832.1| poly(A)-binding protein |
| Match: gi|29654256|ref|NP_819948.1| |
score: 43.51 |
e-value: 0.002 |
Identity: 33.96% |
Span: 159bp (26.8%) |
Frame: 2 |
| gi|29654256|ref|NP_819948.1| RNA-binding protein [Coxiella burnetii RSA 493] gi|29541522|gb|AAO90462.1| RNA-binding p... |
| Match: gi|28317322|gb|AAO39657.1| |
score: 43.51 |
e-value: 0.002 |
Identity: 31.76% |
Span: 255bp (43.0%) |
Frame: 2 |
| gi|28317322|gb|AAO39657.1| AT01548p [Drosophila melanogaster] |
| Match: gi|24648520|ref|NP_732555.1| |
score: 43.51 |
e-value: 0.002 |
Identity: 31.76% |
Span: 255bp (43.0%) |
Frame: 2 |
| gi|24648520|ref|NP_732555.1| CG17838-PE [Drosophila melanogaster] gi|23171808|gb|AAN13831.1| CG17838-PE [Drosophila m... |
| Match: gi|23487965|gb|EAA21186.1| |
score: 43.51 |
e-value: 0.002 |
Identity: 31.43% |
Span: 210bp (35.4%) |
Frame: 2 |
| gi|23487965|gb|EAA21186.1| ribonucleoprotein homolog F21B7.26 - Arabidopsis thaliana-related [Plasmodium yoelii yoelii] |
| Match: gi|27709546|ref|XP_229073.1| |
score: 43.51 |
e-value: 0.002 |
Identity: 29.63% |
Span: 243bp (41.0%) |
Frame: 2 |
| gi|27709546|ref|XP_229073.1| similar to heterogeneous nuclear ribonucleoprotein D-like; DNA segment, Chr 5, Wayne Sta... |
| Match: gi|21356139|ref|NP_650913.1| |
score: 43.51 |
e-value: 0.002 |
Identity: 31.76% |
Span: 255bp (43.0%) |
Frame: 2 |
| gi|21356139|ref|NP_650913.1| CG17838-PB [Drosophila melanogaster] gi|16197897|gb|AAL13706.1| GH28335p [Drosophila mel... |
| Match: gi|24648524|ref|NP_732557.1| |
score: 43.51 |
e-value: 0.002 |
Identity: 31.76% |
Span: 255bp (43.0%) |
Frame: 2 |
| gi|24648524|ref|NP_732557.1| CG17838-PA [Drosophila melanogaster] gi|24648526|ref|NP_732558.1| CG17838-PC [Drosophila... |
| Match: gi|24648522|ref|NP_732556.1| |
score: 43.51 |
e-value: 0.002 |
Identity: 31.76% |
Span: 255bp (43.0%) |
Frame: 2 |
| gi|24648522|ref|NP_732556.1| CG17838-PD [Drosophila melanogaster] gi|23171809|gb|AAF55805.2| CG17838-PD [Drosophila m... |
| Match: gi|23619509|ref|NP_705471.1| |
score: 43.13 |
e-value: 0.003 |
Identity: 32.91% |
Span: 237bp (40.0%) |
Frame: 2 |
| gi|23619509|ref|NP_705471.1| RNA binding protein, putative [Plasmodium falciparum 3D7] gi|23615716|emb|CAD52708.1| RN... |
| Match: gi|23509317|ref|NP_701984.1| |
score: 43.13 |
e-value: 0.003 |
Identity: 31.43% |
Span: 210bp (35.4%) |
Frame: 2 |
| gi|23509317|ref|NP_701984.1| hypothetical protein [Plasmodium falciparum 3D7] gi|23497160|gb|AAN36708.1| hypothetical... |
| Match: gi|21666573|gb|AAM73765.1| |
score: 43.13 |
e-value: 0.003 |
Identity: 27.54% |
Span: 414bp (69.8%) |
Frame: 2 |
| gi|21666573|gb|AAM73765.1| RNA-binding protein AKIP1 [Vicia faba] |
| Match: gi|38111130|gb|EAA56754.1| |
score: 43.13 |
e-value: 0.003 |
Identity: 41.07% |
Span: 153bp (25.8%) |
Frame: 2 |
| gi|38111130|gb|EAA56754.1| hypothetical protein MG07109.4 [Magnaporthe grisea 70-15] |
| Match: gi|12851808|dbj|BAB29173.1| |
score: 42.74 |
e-value: 0.004 |
Identity: 33.73% |
Span: 240bp (40.5%) |
Frame: 2 |
| gi|12851808|dbj|BAB29173.1| unnamed protein product [Mus musculus] |
| Match: gi|6754266|ref|NP_034618.1| |
score: 42.74 |
e-value: 0.004 |
Identity: 33.73% |
Span: 240bp (40.5%) |
Frame: 2 |
| gi|6754266|ref|NP_034618.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D); HU-antigen D ... |
| Match: gi|5739519|gb|AAD50508.1| |
score: 42.74 |
e-value: 0.004 |
Identity: 33.73% |
Span: 240bp (40.5%) |
Frame: 2 |
| gi|5739519|gb|AAD50508.1| RNA-binding protein HuD [Gallus gallus] |
| Match: gi|17136828|ref|NP_476936.1| |
score: 38.51 |
e-value: 0.072 |
Identity: 32.86% |
Span: 210bp (35.4%) |
Frame: 2 |
| gi|17136828|ref|NP_476936.1| RNA-binding protein 9 CG3151-PD [Drosophila melanogaster] gi|19549690|ref|NP_599125.1| R... |
| Match: gi|17136830|ref|NP_476937.1| |
score: 38.51 |
e-value: 0.072 |
Identity: 32.86% |
Span: 210bp (35.4%) |
Frame: 2 |
| gi|17136830|ref|NP_476937.1| RNA-binding protein 9 CG3151-PA [Drosophila melanogaster] gi|19549688|ref|NP_599124.1| R... |
| Match: gi|7322081|gb|AAB25519.2| |
score: 38.51 |
e-value: 0.072 |
Identity: 32.86% |
Span: 210bp (35.4%) |
Frame: 2 |
| gi|7322081|gb|AAB25519.2| RRM9 [Drosophila melanogaster] |
| Match: gi|23509317|ref|NP_701984.1| |
score: 38.51 |
e-value: 0.072 |
Identity: 30.3% |
Span: 198bp (33.4%) |
Frame: 2 |
| gi|23509317|ref|NP_701984.1| hypothetical protein [Plasmodium falciparum 3D7] gi|23497160|gb|AAN36708.1| hypothetical... |
|
| 165 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 47 hits recorded |
| Match: At2g44710.1 |
score: 69.71 |
e-value: 1.1e-12 |
Identity: 33.71% |
Span: 267bp (45.0%) |
Frame: 2 |
| At2g44710.1 68409.m05027 RRM-containing protein |
| Match: At4g20030.1 |
score: 46.98 |
e-value: 7.7e-06 |
Identity: 34.02% |
Span: 291bp (49.1%) |
Frame: 2 |
| At4g20030.1 68411.m02674 RNA recognition motif (RRM) - containing protein low similarity to heterogeneous nuclear rib... |
| Match: At1g71770.1 |
score: 43.9 |
e-value: 6.5e-05 |
Identity: 37.74% |
Span: 159bp (26.8%) |
Frame: 2 |
| At1g71770.1 68408.m07610 polyadenylate-binding protein 5 (PABP5) identical to GB:Q05196 from [Arabidopsis thaliana] |
| Match: At1g58470.1 |
score: 43.9 |
e-value: 6.5e-05 |
Identity: 30.34% |
Span: 267bp (45.0%) |
Frame: 2 |
| At1g58470.1 68408.m06095 RNA-binding protein identical to RNA binding protein GI:6566348 from (Arabidopsis thaliana);... |
| Match: At5g47620.1 |
score: 42.36 |
e-value: 0.00019 |
Identity: 32.47% |
Span: 231bp (39.0%) |
Frame: 2 |
| At5g47620.1 68412.m07922 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At5g47620.2 |
score: 42.36 |
e-value: 0.00019 |
Identity: 32.47% |
Span: 231bp (39.0%) |
Frame: 2 |
| At5g47620.2 68412.m07923 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At4g26650.1 |
score: 41.97 |
e-value: 0.00025 |
Identity: 32.47% |
Span: 231bp (39.0%) |
Frame: 2 |
| At4g26650.1 68411.m03495 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At4g36960.1 |
score: 41.59 |
e-value: 0.00032 |
Identity: 29.11% |
Span: 234bp (39.5%) |
Frame: 2 |
| At4g36960.1 68411.m04762 RNA recognition motif (RRM) - containing protein similar to SP|P48809 Heterogeneous nuclear ... |
| Match: At5g55550.2 |
score: 40.43 |
e-value: 0.00072 |
Identity: 32% |
Span: 225bp (37.9%) |
Frame: 2 |
| At5g55550.2 68412.m06264 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At5g55550.1 |
score: 40.43 |
e-value: 0.00072 |
Identity: 32% |
Span: 225bp (37.9%) |
Frame: 2 |
| At5g55550.1 68412.m06263 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At3g55460.1 |
score: 39.28 |
e-value: 0.002 |
Identity: 25.78% |
Span: 363bp (61.2%) |
Frame: 2 |
| At3g55460.1 68410.m05688 arginine/serine-rich protein SCL30 Serine/arginine-rich protein/putative splicing factor, Ar... |
| Match: At4g14300.1 |
score: 38.89 |
e-value: 0.002 |
Identity: 28% |
Span: 225bp (37.9%) |
Frame: 2 |
| At4g14300.1 68411.m01996 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At4g36960.1 |
score: 38.51 |
e-value: 0.003 |
Identity: 27.78% |
Span: 237bp (40.0%) |
Frame: 2 |
| At4g36960.1 68411.m04762 RNA recognition motif (RRM) - containing protein similar to SP|P48809 Heterogeneous nuclear ... |
| Match: At3g07810.2 |
score: 38.12 |
e-value: 0.004 |
Identity: 31.17% |
Span: 231bp (39.0%) |
Frame: 2 |
| At3g07810.2 68410.m00863 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At5g64200.2 |
score: 38.12 |
e-value: 0.004 |
Identity: 24.8% |
Span: 339bp (57.2%) |
Frame: 2 |
| At5g64200.2 68412.m08081 arginine/serine-rich splicing factor SC35 contains similarity to splicing factor |
| Match: At5g64200.1 |
score: 38.12 |
e-value: 0.004 |
Identity: 24.8% |
Span: 339bp (57.2%) |
Frame: 2 |
| At5g64200.1 68412.m08080 arginine/serine-rich splicing factor SC35 contains similarity to splicing factor |
| Match: At3g07810.1 |
score: 38.12 |
e-value: 0.004 |
Identity: 31.17% |
Span: 231bp (39.0%) |
Frame: 2 |
| At3g07810.1 68410.m00862 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At1g73530.1 |
score: 37.35 |
e-value: 0.006 |
Identity: 35.42% |
Span: 144bp (24.3%) |
Frame: 2 |
| At1g73530.1 68408.m07810 RNA recognition motif (RRM) - containing protein low similarity to SP|Q03251 Glycine-rich RN... |
| Match: At4g00830.1 |
score: 37.35 |
e-value: 0.006 |
Identity: 27.16% |
Span: 243bp (41.0%) |
Frame: 2 |
| At4g00830.1 68411.m00105 RNA recognition motif (RRM) - containing protein similar to nucleolin protein; contains Inte... |
| Match: At5g47620.2 |
score: 36.96 |
e-value: 0.008 |
Identity: 44.12% |
Span: 102bp (17.2%) |
Frame: 2 |
| At5g47620.2 68412.m07923 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At5g40490.1 |
score: 36.96 |
e-value: 0.008 |
Identity: 26.09% |
Span: 276bp (46.5%) |
Frame: 2 |
| At5g40490.1 68412.m04421 RNA recognition motif (RRM) - containing protein ribonucleoprotein, Xenopus laevis, PIR:S407... |
| Match: At5g47620.1 |
score: 36.96 |
e-value: 0.008 |
Identity: 44.12% |
Span: 102bp (17.2%) |
Frame: 2 |
| At5g47620.1 68412.m07922 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At1g33470.1 |
score: 36.58 |
e-value: 0.01 |
Identity: 37.74% |
Span: 150bp (25.3%) |
Frame: 2 |
| At1g33470.1 68408.m03752 RNA recognition motif (RRM) - containing protein similar to RRM-containing protein SEB-4 [Xe... |
| Match: At4g26650.1 |
score: 36.19 |
e-value: 0.014 |
Identity: 35.29% |
Span: 102bp (17.2%) |
Frame: 2 |
| At4g26650.1 68411.m03495 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At3g07810.1 |
score: 36.19 |
e-value: 0.014 |
Identity: 41.18% |
Span: 102bp (17.2%) |
Frame: 2 |
| At3g07810.1 68410.m00862 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At3g07810.2 |
score: 36.19 |
e-value: 0.014 |
Identity: 41.18% |
Span: 102bp (17.2%) |
Frame: 2 |
| At3g07810.2 68410.m00863 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At4g12630.1 |
score: 36.19 |
e-value: 0.014 |
Identity: 31.25% |
Span: 240bp (40.5%) |
Frame: 2 |
| At4g12630.1 68411.m01802 RNA recognition motif (RRM) - containing protein similar to serine/arginine rich protein SF2... |
| Match: At2g41060.1 |
score: 36.19 |
e-value: 0.014 |
Identity: 41.3% |
Span: 138bp (23.3%) |
Frame: 2 |
| At2g41060.1 68409.m04594 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At1g34140.1 |
score: 36.19 |
e-value: 0.014 |
Identity: 47.5% |
Span: 120bp (20.2%) |
Frame: 2 |
| At1g34140.1 68408.m03841 polyadenylate-binding protein (poly(A)-binding protein), putative non-consensus splice donor... |
| Match: At4g36960.1 |
score: 35.81 |
e-value: 0.018 |
Identity: 26.09% |
Span: 207bp (34.9%) |
Frame: 2 |
| At4g36960.1 68411.m04762 RNA recognition motif (RRM) - containing protein similar to SP|P48809 Heterogeneous nuclear ... |
| Match: At3g08000.1 |
score: 35.81 |
e-value: 0.018 |
Identity: 36.36% |
Span: 132bp (22.3%) |
Frame: 2 |
| At3g08000.1 68410.m00882 RNA-binding protein, putative similar to RNA-binding protein from [Nicotiana tabacum] GI:158... |
| Match: At5g55550.2 |
score: 35.42 |
e-value: 0.023 |
Identity: 35.29% |
Span: 102bp (17.2%) |
Frame: 2 |
| At5g55550.2 68412.m06264 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At3g20930.1 |
score: 35.42 |
e-value: 0.023 |
Identity: 28% |
Span: 225bp (37.9%) |
Frame: 2 |
| At3g20930.1 68410.m02397 RNA recognition motif (RRM) - containing protein contains Pfam profile: PF00076 RNA recognit... |
| Match: At5g55550.1 |
score: 35.42 |
e-value: 0.023 |
Identity: 35.29% |
Span: 102bp (17.2%) |
Frame: 2 |
| At5g55550.1 68412.m06263 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At2g35410.1 |
score: 35.42 |
e-value: 0.023 |
Identity: 30% |
Span: 240bp (40.5%) |
Frame: 2 |
| At2g35410.1 68409.m03925 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to SP|P19... |
| Match: At3g13224.1 |
score: 35.04 |
e-value: 0.03 |
Identity: 30.43% |
Span: 138bp (23.3%) |
Frame: 2 |
| At3g13224.1 68410.m01485 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g13224.2 |
score: 35.04 |
e-value: 0.03 |
Identity: 30.43% |
Span: 138bp (23.3%) |
Frame: 2 |
| At3g13224.2 68410.m01486 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At5g40490.1 |
score: 34.65 |
e-value: 0.04 |
Identity: 23.89% |
Span: 303bp (51.1%) |
Frame: 2 |
| At5g40490.1 68412.m04421 RNA recognition motif (RRM) - containing protein ribonucleoprotein, Xenopus laevis, PIR:S407... |
| Match: At5g18810.1 |
score: 34.65 |
e-value: 0.04 |
Identity: 21.6% |
Span: 375bp (63.2%) |
Frame: 2 |
| At5g18810.1 68412.m02049 SC35-like splicing factor SCL28 nearly identical to SC35-like splicing factor SCL28, 28 kD [... |
| Match: At5g61030.1 |
score: 34.27 |
e-value: 0.052 |
Identity: 31.91% |
Span: 141bp (23.8%) |
Frame: 2 |
| At5g61030.1 68412.m06929 RNA-binding protein, putative similar to RNA-binding protein from [Solanum tuberosum] GI:158... |
| Match: At4g00830.1 |
score: 34.27 |
e-value: 0.052 |
Identity: 39.62% |
Span: 159bp (26.8%) |
Frame: 2 |
| At4g00830.1 68411.m00105 RNA recognition motif (RRM) - containing protein similar to nucleolin protein; contains Inte... |
| Match: At2g37510.1 |
score: 33.88 |
e-value: 0.068 |
Identity: 39.02% |
Span: 123bp (20.7%) |
Frame: 2 |
| At2g37510.1 68409.m04161 RNA-binding protein, putative similar to SP|P10979 Glycine-rich RNA-binding, abscisic acid-i... |
| Match: At1g07360.1 |
score: 33.88 |
e-value: 0.068 |
Identity: 43.75% |
Span: 144bp (24.3%) |
Frame: 2 |
| At1g07360.1 68408.m00715 RRM-containing RNA-binding protein, putative |
| Match: At3g56860.3 |
score: 33.5 |
e-value: 0.088 |
Identity: 41.3% |
Span: 138bp (23.3%) |
Frame: 2 |
| At3g56860.3 68410.m06942 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At3g10400.1 |
score: 33.5 |
e-value: 0.088 |
Identity: 26.39% |
Span: 216bp (36.4%) |
Frame: 2 |
| At3g10400.1 68410.m01125 RNA recognition motif (RRM) - containing protein low similarity to splicing factor SC35 [Ara... |
| Match: At3g56860.1 |
score: 33.5 |
e-value: 0.088 |
Identity: 41.3% |
Span: 138bp (23.3%) |
Frame: 2 |
| At3g56860.1 68410.m06940 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At3g56860.2 |
score: 33.5 |
e-value: 0.088 |
Identity: 41.3% |
Span: 138bp (23.3%) |
Frame: 2 |
| At3g56860.2 68410.m06941 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
|
