| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|225440998|ref|XP_002277445.1| |
score: 248 |
e-value: 2e-64 |
Identity: 89.26% |
Span: 447bp (73.8%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|89111930|ref|NP_001034752.1| |
score: 246 |
e-value: 1e-63 |
Identity: 87.92% |
Span: 447bp (73.8%) |
Frame: 1 |
| hypothetical protein LOC664621 [Mus musculus] >gi13278055|gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus] |
| Match: gi|255573032|ref|XP_002527446.1| |
score: 240 |
e-value: 6e-62 |
Identity: 83.89% |
Span: 447bp (73.8%) |
Frame: 1 |
| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis] >gi223533181|gb|EEF34938.1| U2 snrnp auxiliary ... |
| Match: gi|255575357|ref|XP_002528581.1| |
score: 238 |
e-value: 3e-61 |
Identity: 85.43% |
Span: 447bp (73.8%) |
Frame: 1 |
| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis] >gi223531977|gb|EEF33789.1| U2 snrnp auxiliary ... |
| Match: gi|224286856|gb|ACN41131.1| |
score: 238 |
e-value: 4e-61 |
Identity: 83.89% |
Span: 447bp (73.8%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|116788026|gb|ABK24730.1| |
score: 238 |
e-value: 4e-61 |
Identity: 83.89% |
Span: 447bp (73.8%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|270243299|emb|CBI30239.1| |
score: 235 |
e-value: 3e-60 |
Identity: 88.73% |
Span: 426bp (70.3%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|294463000|gb|ADE77038.1| |
score: 234 |
e-value: 3e-60 |
Identity: 85.23% |
Span: 447bp (73.8%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|224132068|ref|XP_002328177.1| |
score: 233 |
e-value: 8e-60 |
Identity: 87.23% |
Span: 423bp (69.8%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222837692|gb|EEE76057.1| predicted protein [Populus trichocarpa] |
| Match: gi|148908155|gb|ABR17193.1| |
score: 233 |
e-value: 1e-59 |
Identity: 85.23% |
Span: 447bp (73.8%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|15217666|ref|NP_174086.1| |
score: 232 |
e-value: 2e-59 |
Identity: 81.88% |
Span: 447bp (73.8%) |
Frame: 1 |
| ATU2AF35A; RNA binding / nucleic acid binding / nucleotide binding / zinc ion binding [Arabidopsis thaliana] >gi75336... |
| Match: gi|75338870|sp|Q9ZQW8.1|U2AFA_ORYSJ |
score: 231 |
e-value: 5e-59 |
Identity: 79.19% |
Span: 447bp (73.8%) |
Frame: 1 |
| RecName: Full=Splicing factor U2af small subunit A; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor... |
| Match: gi|3850819|emb|CAA77134.1| |
score: 231 |
e-value: 5e-59 |
Identity: 79.19% |
Span: 447bp (73.8%) |
Frame: 1 |
| U2 snRNP auxiliary factor, small subunit [Oryza sativa] |
| Match: gi|255539352|ref|XP_002510741.1| |
score: 229 |
e-value: 1e-58 |
Identity: 81.21% |
Span: 447bp (73.8%) |
Frame: 1 |
| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis] >gi223551442|gb|EEF52928.1| U2 snrnp auxiliary ... |
| Match: gi|225457677|ref|XP_002276502.1| |
score: 229 |
e-value: 1e-58 |
Identity: 81.21% |
Span: 447bp (73.8%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|294461365|gb|ADE76244.1| |
score: 229 |
e-value: 2e-58 |
Identity: 80.54% |
Span: 447bp (73.8%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|224086130|ref|XP_002307825.1| |
score: 228 |
e-value: 2e-58 |
Identity: 79.19% |
Span: 447bp (73.8%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222857274|gb|EEE94821.1| predicted protein [Populus trichocarpa] |
| Match: gi|224061819|ref|XP_002300614.1| |
score: 228 |
e-value: 2e-58 |
Identity: 79.19% |
Span: 447bp (73.8%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222842340|gb|EEE79887.1| predicted protein [Populus trichocarpa] |
| Match: gi|242058279|ref|XP_002458285.1| |
score: 227 |
e-value: 5e-58 |
Identity: 78.52% |
Span: 447bp (73.8%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_03g030670 [Sorghum bicolor] >gi241930260|gb|EES03405.1| hypothetical protein SORBIDRA... |
| Match: gi|15239067|ref|NP_199096.1| |
score: 226 |
e-value: 9e-58 |
Identity: 78.52% |
Span: 447bp (73.8%) |
Frame: 1 |
| U2AF35B; RNA binding / nucleic acid binding / nucleotide binding / zinc ion binding [Arabidopsis thaliana] >gi4257354... |
| Match: gi|224034457|gb|ACN36304.1| |
score: 226 |
e-value: 1e-57 |
Identity: 77.85% |
Span: 447bp (73.8%) |
Frame: 1 |
| unknown [Zea mays] |
| Match: gi|195622372|gb|ACG33016.1| |
score: 226 |
e-value: 1e-57 |
Identity: 77.85% |
Span: 447bp (73.8%) |
Frame: 1 |
| splicing factor U2af 38 kDa subunit [Zea mays] >gi195639644|gb|ACG39290.1| splicing factor U2af 38 kDa subunit [Zea m... |
| Match: gi|226502062|ref|NP_001140674.1| |
score: 226 |
e-value: 1e-57 |
Identity: 77.85% |
Span: 447bp (73.8%) |
Frame: 1 |
| hypothetical protein LOC100272749 [Zea mays] >gi194700362|gb|ACF84265.1| unknown [Zea mays] >gi|194700522|gb|ACF84345... |
| Match: gi|242088837|ref|XP_002440251.1| |
score: 226 |
e-value: 2e-57 |
Identity: 77.85% |
Span: 447bp (73.8%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_09g028530 [Sorghum bicolor] >gi241945536|gb|EES18681.1| hypothetical protein SORBIDRA... |
| Match: gi|226506342|ref|NP_001150605.1| |
score: 226 |
e-value: 2e-57 |
Identity: 77.85% |
Span: 447bp (73.8%) |
Frame: 1 |
| splicing factor U2af 38 kDa subunit [Zea mays] >gi195640524|gb|ACG39730.1| splicing factor U2af 38 kDa subunit [Zea m... |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 5 hits recorded |
| Match: At1G27650.1 |
score: 232 |
e-value: 1e-61 |
Identity: 81.88% |
Span: 447bp (73.8%) |
Frame: 1 |
| Symbols: ATU2AF35A | ATU2AF35A; RNA binding | chr1:9615139-9616029 FORWARD |
| Match: At5G42820.1 |
score: 226 |
e-value: 6e-60 |
Identity: 78.52% |
Span: 447bp (73.8%) |
Frame: 1 |
| Symbols: ATU2AF35B | ATU2AF35B; RNA binding | chr5:17187673-17188524 REVERSE |
| Match: At5G42820.2 |
score: 226 |
e-value: 6e-60 |
Identity: 78.52% |
Span: 447bp (73.8%) |
Frame: 1 |
| Symbols: ATU2AF35B | ATU2AF35B; RNA binding | chr5:17187673-17188524 REVERSE |
| Match: At1G27650.2 |
score: 217 |
e-value: 5e-57 |
Identity: 83.82% |
Span: 408bp (67.3%) |
Frame: 1 |
| Symbols: ATU2AF35A | ATU2AF35A | chr1:9615289-9616029 FORWARD |
| Match: At1G10320.1 |
score: 75.9 |
e-value: 2e-14 |
Identity: 37.31% |
Span: 393bp (64.9%) |
Frame: 1 |
| U2 snRNP auxiliary factor-related | chr1:3384166-3388375 REVERSE |
|
| swissprot [blastx] | Showing best 19 hits recorded |
| Match: Q9S709 |
score: 232 |
e-value: 2e-60 |
Identity: 81.88% |
Span: 447bp (73.8%) |
Frame: 1 |
| Splicing factor U2af small subunit A OS=Arabidopsis thaliana GN=U2AF35A PE=1 SV=1 |
| Match: Q9ZQW8 |
score: 231 |
e-value: 3e-60 |
Identity: 79.19% |
Span: 447bp (73.8%) |
Frame: 1 |
| Splicing factor U2af small subunit A OS=Oryza sativa subsp. japonica GN=U2AF35A PE=2 SV=1 |
| Match: Q9FMY5 |
score: 226 |
e-value: 6e-59 |
Identity: 78.52% |
Span: 447bp (73.8%) |
Frame: 1 |
| Splicing factor U2af small subunit B OS=Arabidopsis thaliana GN=U2AF35B PE=2 SV=1 |
| Match: Q6AUG0 |
score: 224 |
e-value: 2e-58 |
Identity: 76.51% |
Span: 447bp (73.8%) |
Frame: 1 |
| Splicing factor U2af small subunit B OS=Oryza sativa subsp. japonica GN=U2AF35B PE=2 SV=1 |
| Match: Q9D883 |
score: 145 |
e-value: 2e-34 |
Identity: 51.33% |
Span: 447bp (73.8%) |
Frame: 1 |
| Splicing factor U2AF 35 kDa subunit OS=Mus musculus GN=U2af1 PE=2 SV=4 |
| Match: Q01081 |
score: 145 |
e-value: 2e-34 |
Identity: 51.33% |
Span: 447bp (73.8%) |
Frame: 1 |
| Splicing factor U2AF 35 kDa subunit OS=Homo sapiens GN=U2AF1 PE=1 SV=3 |
| Match: A1A4K8 |
score: 145 |
e-value: 2e-34 |
Identity: 51.33% |
Span: 447bp (73.8%) |
Frame: 1 |
| Splicing factor U2AF 35 kDa subunit OS=Bos taurus GN=U2AF1 PE=2 SV=1 |
| Match: Q94535 |
score: 139 |
e-value: 1e-32 |
Identity: 46.36% |
Span: 444bp (73.3%) |
Frame: 1 |
| Splicing factor U2af 38 kDa subunit OS=Drosophila melanogaster GN=U2af38 PE=1 SV=2 |
| Match: Q3T127 |
score: 139 |
e-value: 1e-32 |
Identity: 46.67% |
Span: 447bp (73.8%) |
Frame: 1 |
| Splicing factor U2AF 26 kDa subunit OS=Bos taurus GN=U2AF1L4 PE=2 SV=1 |
| Match: Q7TP17 |
score: 139 |
e-value: 2e-32 |
Identity: 46.67% |
Span: 447bp (73.8%) |
Frame: 1 |
| Splicing factor U2AF 26 kDa subunit OS=Rattus norvegicus GN=U2af1l4 PE=2 SV=1 |
| Match: Q8BGJ9 |
score: 139 |
e-value: 2e-32 |
Identity: 46.67% |
Span: 447bp (73.8%) |
Frame: 1 |
| Splicing factor U2AF 26 kDa subunit OS=Mus musculus GN=U2af1l4 PE=1 SV=1 |
| Match: Q8WU68 |
score: 133 |
e-value: 7e-31 |
Identity: 44.67% |
Span: 447bp (73.8%) |
Frame: 1 |
| Splicing factor U2AF 26 kDa subunit OS=Homo sapiens GN=U2AF1L4 PE=1 SV=2 |
| Match: Q09176 |
score: 128 |
e-value: 2e-29 |
Identity: 48.63% |
Span: 438bp (72.3%) |
Frame: 1 |
| Splicing factor U2AF 23 kDa subunit OS=Schizosaccharomyces pombe GN=SPAP8A3.06 PE=1 SV=2 |
| Match: Q15696 |
score: 76.3 |
e-value: 1e-13 |
Identity: 42.17% |
Span: 249bp (41.1%) |
Frame: 1 |
| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 OS=Homo sapiens GN=ZRSR2 PE=1 SV=2 |
| Match: Q15695 |
score: 76.3 |
e-value: 1e-13 |
Identity: 42.17% |
Span: 249bp (41.1%) |
Frame: 1 |
| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1 OS=Homo sapiens GN=ZRSR1 PE=2 SV=2 |
| Match: Q9SY74 |
score: 75.9 |
e-value: 2e-13 |
Identity: 37.31% |
Span: 393bp (64.9%) |
Frame: 1 |
| Zinc finger CCCH domain-containing protein 5 OS=Arabidopsis thaliana GN=At1g10320 PE=2 SV=2 |
| Match: Q64707 |
score: 75.5 |
e-value: 2e-13 |
Identity: 40.96% |
Span: 249bp (41.1%) |
Frame: 1 |
| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1 OS=Mus musculus GN=Zrsr1 PE=2 SV=1 |
| Match: Q62377 |
score: 74.3 |
e-value: 5e-13 |
Identity: 40.96% |
Span: 249bp (41.1%) |
Frame: 1 |
| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 OS=Mus musculus GN=Zrsr2 PE=2 SV=1 |
| Match: Q6YVX9 |
score: 73.2 |
e-value: 1e-12 |
Identity: 35.07% |
Span: 393bp (64.9%) |
Frame: 1 |
| Zinc finger CCCH domain-containing protein 16 OS=Oryza sativa subsp. japonica GN=Os02g0557500 PE=2 SV=2 |
|
