| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|12083527|gb|AAG48836.1| |
score: 136.7 |
e-value: 2.8e-31 |
Identity: 73.75% |
Span: 240bp (38.7%) |
Frame: 2 |
| gi|12083527|gb|AAG48836.1| similar to Arabidopsis thaliana DNA-directed RNA polymerase (EC 2.7.7.6) II largest chain ... |
| Match: gi|16505|emb|CAA37130.1| |
score: 132.9 |
e-value: 1.9e-55 |
Identity: 73.75% |
Span: 237bp (38.2%) |
Frame: 2 |
| RNA polymerase II [Arabidopsis thaliana] |
| Match: gi|7428072|pir||JDMU1 |
score: 132.9 |
e-value: 1.9e-55 |
Identity: 73.75% |
Span: 237bp (38.2%) |
Frame: 2 |
| gi|7428072|pir||JDMU1 DNA-directed RNA polymerase (EC 2.7.7.6) II largest chain - Arabidopsis thaliana |
| Match: gi|15233338|ref|NP_195305.1| |
score: 132.9 |
e-value: 1.9e-55 |
Identity: 73.75% |
Span: 237bp (38.2%) |
Frame: 2 |
| NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] >gi12644149... |
| Match: gi|16494|emb|CAA36735.1| |
score: 127.9 |
e-value: 6e-54 |
Identity: 72.15% |
Span: 237bp (38.2%) |
Frame: 2 |
| DNA-directed RNA polymerase [Arabidopsis thaliana] |
| Match: gi|33326213|gb|AAQ08516.1| |
score: 124.4 |
e-value: 1.4e-27 |
Identity: 72.97% |
Span: 222bp (35.8%) |
Frame: 2 |
| gi|33326213|gb|AAQ08516.1| RNA polymerase II largest subunit [Magnolia x soulangeana] |
| Match: gi|33326217|gb|AAQ08518.1| |
score: 123.2 |
e-value: 3.2e-27 |
Identity: 71.23% |
Span: 219bp (35.3%) |
Frame: 2 |
| gi|33326217|gb|AAQ08518.1| RNA polymerase II largest subunit [Amborella trichopoda] |
| Match: gi|33326211|gb|AAQ08515.1| |
score: 122.1 |
e-value: 7.2e-27 |
Identity: 72.97% |
Span: 222bp (35.8%) |
Frame: 2 |
| gi|33326211|gb|AAQ08515.1| RNA polymerase II largest subunit [Zea mays] |
| Match: gi|33326209|gb|AAQ08514.1| |
score: 122.1 |
e-value: 7.2e-27 |
Identity: 73.97% |
Span: 219bp (35.3%) |
Frame: 2 |
| gi|33326209|gb|AAQ08514.1| RNA polymerase II largest subunit [Welwitschia mirabilis] |
| Match: gi|33326207|gb|AAQ08513.1| |
score: 120.9 |
e-value: 1.6e-26 |
Identity: 71.23% |
Span: 219bp (35.3%) |
Frame: 2 |
| gi|33326207|gb|AAQ08513.1| RNA polymerase II largest subunit [Pinus nigra] |
| Match: gi|33326205|gb|AAQ08512.1| |
score: 120.6 |
e-value: 2.1e-26 |
Identity: 72.6% |
Span: 219bp (35.3%) |
Frame: 2 |
| gi|33326205|gb|AAQ08512.1| RNA polymerase II largest subunit [Cycas revoluta] |
| Match: gi|33326215|gb|AAQ08517.1| |
score: 118.2 |
e-value: 1e-25 |
Identity: 71.23% |
Span: 219bp (35.3%) |
Frame: 2 |
| gi|33326215|gb|AAQ08517.1| RNA polymerase II largest subunit [Nymphaea odorata] |
| Match: gi|33326203|gb|AAQ08511.1| |
score: 117.9 |
e-value: 1.3e-25 |
Identity: 71.23% |
Span: 219bp (35.3%) |
Frame: 2 |
| gi|33326203|gb|AAQ08511.1| RNA polymerase II largest subunit [Zamia muricata] |
| Match: gi|33326219|gb|AAQ08519.1| |
score: 116.3 |
e-value: 3.9e-25 |
Identity: 68.49% |
Span: 219bp (35.3%) |
Frame: 2 |
| gi|33326219|gb|AAQ08519.1| RNA polymerase II largest subunit [Psilotum nudum] |
| Match: gi|3063677|gb|AAC14137.1| |
score: 107.8 |
e-value: 1.4e-22 |
Identity: 61.11% |
Span: 216bp (34.8%) |
Frame: 2 |
| gi|3063677|gb|AAC14137.1| RNA polymerase II largest subunit [Dictyostelium discoideum] |
| Match: gi|16494|emb|CAA36735.1| |
score: 105.9 |
e-value: 6e-54 |
Identity: 69.23% |
Span: 210bp (33.9%) |
Frame: 3 |
| DNA-directed RNA polymerase [Arabidopsis thaliana] |
| Match: gi|16505|emb|CAA37130.1| |
score: 105.9 |
e-value: 1.9e-55 |
Identity: 69.23% |
Span: 210bp (33.9%) |
Frame: 3 |
| RNA polymerase II [Arabidopsis thaliana] |
| Match: gi|15233338|ref|NP_195305.1| |
score: 105.9 |
e-value: 1.9e-55 |
Identity: 69.23% |
Span: 210bp (33.9%) |
Frame: 3 |
| NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] >gi12644149... |
| Match: gi|7428072|pir||JDMU1 |
score: 105.9 |
e-value: 1.9e-55 |
Identity: 69.23% |
Span: 210bp (33.9%) |
Frame: 3 |
| gi|7428072|pir||JDMU1 DNA-directed RNA polymerase (EC 2.7.7.6) II largest chain - Arabidopsis thaliana |
| Match: gi|45501363|gb|AAH67295.1| |
score: 104.4 |
e-value: 1e-30 |
Identity: 55.56% |
Span: 237bp (38.2%) |
Frame: 2 |
| gi|45501363|gb|AAH67295.1| Unknown (protein for MGC:75453) [Homo sapiens] |
| Match: gi|133327|sp|P08775|RPB1_MOUSE |
score: 104.4 |
e-value: 9.9e-31 |
Identity: 55.56% |
Span: 237bp (38.2%) |
Frame: 2 |
| gi|133327|sp|P08775|RPB1_MOUSE DNA-directed RNA polymerase II largest subunit (RPB1) |
| Match: gi|2145091|gb|AAB58418.1| |
score: 104.4 |
e-value: 9.9e-31 |
Identity: 55.56% |
Span: 237bp (38.2%) |
Frame: 2 |
| gi|2145091|gb|AAB58418.1| RNA polymerase II largest subunit |
| Match: gi|7434727|pir||I38186 |
score: 104.4 |
e-value: 9.9e-31 |
Identity: 55.56% |
Span: 237bp (38.2%) |
Frame: 2 |
| gi|7434727|pir||I38186 RNA polymerase II largest subunit - human gi|825713|emb|CAA52862.1| RNA polymerase II largest ... |
| Match: gi|6677795|ref|NP_033115.1| |
score: 104.4 |
e-value: 9.9e-31 |
Identity: 55.56% |
Span: 237bp (38.2%) |
Frame: 2 |
| gi|6677795|ref|NP_033115.1| polymerase (RNA) II (DNA directed) polypeptide A; RNA polymerase II 1 [Mus musculus] gi|9... |
| Match: gi|2443334|dbj|BAA22376.1| |
score: 104.4 |
e-value: 9.9e-31 |
Identity: 55.56% |
Span: 237bp (38.2%) |
Frame: 2 |
| gi|2443334|dbj|BAA22376.1| RNA polymerase II largest subunit [Cricetulus griseus] |
| Match: gi|34871645|ref|XP_343923.1| |
score: 104.4 |
e-value: 9.9e-31 |
Identity: 55.56% |
Span: 237bp (38.2%) |
Frame: 2 |
| gi|34871645|ref|XP_343923.1| similar to DNA-directed RNA polymerase II largest subunit (RPB1) [Rattus norvegicus] |
| Match: gi|4505939|ref|NP_000928.1| |
score: 104.4 |
e-value: 9.9e-31 |
Identity: 55.56% |
Span: 237bp (38.2%) |
Frame: 2 |
| gi|4505939|ref|NP_000928.1| DNA directed RNA polymerase II polypeptide A; polymerase (RNA) II (DNA directed) polypept... |
| Match: gi|19112465|ref|NP_595673.1| |
score: 100.9 |
e-value: 1.1e-32 |
Identity: 50.59% |
Span: 240bp (38.7%) |
Frame: 2 |
| gi|19112465|ref|NP_595673.1| DNA-directed RNA polymerase II largest subunit [Schizosaccharomyces pombe] gi|548817|sp|... |
| Match: gi|279533|pir||RNFF2L |
score: 100.1 |
e-value: 1.3e-30 |
Identity: 52.44% |
Span: 240bp (38.7%) |
Frame: 2 |
| gi|279533|pir||RNFF2L DNA-directed RNA polymerase (EC 2.7.7.6) II 215K chain [validated] - fruit fly (Drosophila mela... |
| Match: gi|17530899|ref|NP_511124.1| |
score: 100.1 |
e-value: 1.3e-30 |
Identity: 52.44% |
Span: 240bp (38.7%) |
Frame: 2 |
| gi|17530899|ref|NP_511124.1| RNA polymerase II 215kD subunit CG1554-PA [Drosophila melanogaster] gi|14286163|sp|P0405... |
| Match: gi|158321|gb|AAA28863.1| |
score: 100.1 |
e-value: 1.3e-30 |
Identity: 52.44% |
Span: 240bp (38.7%) |
Frame: 2 |
| gi|158321|gb|AAA28863.1| large subunit of RNA polymerase II |
| Match: gi|4808162|emb|CAB42796.1| |
score: 99.75 |
e-value: 1.7e-30 |
Identity: 52.44% |
Span: 240bp (38.7%) |
Frame: 2 |
| gi|4808162|emb|CAB42796.1| largest subunit of the RNA polymerase II complex [Drosophila madeirensis] |
| Match: gi|21280521|gb|AAM45153.1| |
score: 99.75 |
e-value: 3.8e-20 |
Identity: 50.63% |
Span: 237bp (38.2%) |
Frame: 2 |
| gi|21280521|gb|AAM45153.1| RNA polymerase II largest subunit [Cercomonas ATCC50319] |
| Match: gi|4808177|emb|CAB42800.1| |
score: 99.75 |
e-value: 1.7e-30 |
Identity: 52.44% |
Span: 240bp (38.7%) |
Frame: 2 |
| gi|4808177|emb|CAB42800.1| largest subunit of the RNA polymerase II complex [Drosophila subobscura] gi|9587179|gb|AAF... |
| Match: gi|4808164|emb|CAB42795.1| |
score: 99.75 |
e-value: 1.7e-30 |
Identity: 52.44% |
Span: 240bp (38.7%) |
Frame: 2 |
| gi|4808164|emb|CAB42795.1| largest subunit of the RNA polymerase II complex [Drosophila guanche] |
| Match: gi|39580358|emb|CAE61463.1| |
score: 98.98 |
e-value: 6.5e-20 |
Identity: 55.7% |
Span: 231bp (37.3%) |
Frame: 2 |
| gi|39580358|emb|CAE61463.1| Hypothetical protein CBG05355 [Caenorhabditis briggsae] |
| Match: gi|12083527|gb|AAG48836.1| |
score: 98.6 |
e-value: 8.5e-20 |
Identity: 60.92% |
Span: 237bp (38.2%) |
Frame: 3 |
| gi|12083527|gb|AAG48836.1| similar to Arabidopsis thaliana DNA-directed RNA polymerase (EC 2.7.7.6) II largest chain ... |
| Match: gi|31226322|ref|XP_317690.1| |
score: 97.83 |
e-value: 1.4e-29 |
Identity: 51.22% |
Span: 240bp (38.7%) |
Frame: 2 |
| gi|31226322|ref|XP_317690.1| ENSANGP00000010305 [Anopheles gambiae] gi|21300163|gb|EAA12308.1| ENSANGP00000010305 [An... |
| Match: gi|46228363|gb|EAK89262.1| |
score: 97.06 |
e-value: 2.5e-19 |
Identity: 56.94% |
Span: 216bp (34.8%) |
Frame: 2 |
| gi|46228363|gb|EAK89262.1| putative DNA-directed RNA polymerase,possible RNA polymerase A/beta'/A'' subunit, long PHY... |
| Match: gi|38091170|emb|CAE46439.1| |
score: 94.74 |
e-value: 1.2e-18 |
Identity: 46.84% |
Span: 237bp (38.2%) |
Frame: 2 |
| gi|38091170|emb|CAE46439.1| RNA polymerase II largest subunit [Cercomonas sp. ATCC 50318] |
| Match: gi|38091164|emb|CAE46436.1| |
score: 94.36 |
e-value: 1.6e-18 |
Identity: 47.5% |
Span: 237bp (38.2%) |
Frame: 2 |
| gi|38091164|emb|CAE46436.1| RNA polymerase II largest subunit [Haynesina germanica] |
| Match: gi|4808166|emb|CAB42797.1| |
score: 93.59 |
e-value: 2.7e-18 |
Identity: 51.25% |
Span: 234bp (37.7%) |
Frame: 2 |
| gi|4808166|emb|CAB42797.1| largest subunit of the RNA polymerase II complex [Drosophila pseudoobscura] |
| Match: gi|102468|pir||A34092 |
score: 93.59 |
e-value: 2.7e-18 |
Identity: 53.16% |
Span: 231bp (37.3%) |
Frame: 2 |
| gi|102468|pir||A34092 DNA-directed RNA polymerase (EC 2.7.7.6) II large chain - Caenorhabditis elegans gi|156405|gb|A... |
| Match: gi|46108068|ref|XP_381092.1| |
score: 93.59 |
e-value: 1.6e-27 |
Identity: 51.28% |
Span: 234bp (37.7%) |
Frame: 2 |
| gi|46108068|ref|XP_381092.1| hypothetical protein FG00916.1 [Gibberella zeae PH-1] >gi|42544725|gb|EAA67568.1| hypoth... |
| Match: gi|21542435|sp|P16356|RPB1_CAEEL |
score: 93.59 |
e-value: 2.7e-18 |
Identity: 53.16% |
Span: 231bp (37.3%) |
Frame: 2 |
| gi|21542435|sp|P16356|RPB1_CAEEL DNA-directed RNA polymerase II largest subunit gi|14574184|gb|AAA96158.2| Amanitin r... |
| Match: gi|133325|sp|P28364|RPB1_EUPOC |
score: 90.89 |
e-value: 5.4e-25 |
Identity: 46.91% |
Span: 243bp (39.2%) |
Frame: 2 |
| gi|133325|sp|P28364|RPB1_EUPOC DNA-directed RNA polymerase II largest subunit gi|479436|pir||S33886 DNA-directed RNA ... |
| Match: gi|45187959|ref|NP_984182.1| |
score: 90.12 |
e-value: 6.7e-29 |
Identity: 49.32% |
Span: 219bp (35.3%) |
Frame: 2 |
| gi|45187959|ref|NP_984182.1| ADR086Cp [Eremothecium gossypii] >gi|44982743|gb|AAS52006.1| ADR086Cp [Eremothecium goss... |
| Match: gi|32417630|ref|XP_329293.1| |
score: 90.12 |
e-value: 5.2e-29 |
Identity: 52.05% |
Span: 219bp (35.3%) |
Frame: 2 |
| gi|32417630|ref|XP_329293.1| hypothetical protein [Neurospora crassa] gi|28925863|gb|EAA34861.1| hypothetical protein... |
| Match: gi|46441230|gb|EAL00529.1| |
score: 90.12 |
e-value: 3.7e-30 |
Identity: 48.1% |
Span: 237bp (38.2%) |
Frame: 2 |
| gi|46441230|gb|EAL00529.1| hypothetical protein CaO19.7655 [Candida albicans SC5314] |
| Match: gi|12642612|gb|AAK00310.1| |
score: 86.66 |
e-value: 1e-26 |
Identity: 51.95% |
Span: 219bp (35.3%) |
Frame: 2 |
| gi|12642612|gb|AAK00310.1| DNA-dependent RNA polymerase II largest subunit RPB1 [Glaucosphaera vacuolata] |
| Match: gi|40217261|emb|CAD67612.1| |
score: 86.27 |
e-value: 1.8e-26 |
Identity: 53.52% |
Span: 207bp (33.4%) |
Frame: 2 |
| gi|40217261|emb|CAD67612.1| largest subunit of RNA polymerase II [Drosophila pseudoobscura] |
| Match: gi|4398|emb|CAA26904.1| |
score: 86.27 |
e-value: 3.8e-26 |
Identity: 46.58% |
Span: 219bp (35.3%) |
Frame: 2 |
| gi|4398|emb|CAA26904.1| put. RNA polymerase II largest subunit [Saccharomyces cerevisiae] |
| Match: gi|6320061|ref|NP_010141.1| |
score: 86.27 |
e-value: 3.8e-26 |
Identity: 46.58% |
Span: 219bp (35.3%) |
Frame: 2 |
| gi|6320061|ref|NP_010141.1| RNA polymerase II large subunit; Rpo21p [Saccharomyces cerevisiae] gi|2507347|sp|P04050|R... |
| Match: gi|133328|sp|P14248|RPB1_PLAFD |
score: 84.73 |
e-value: 1.4e-21 |
Identity: 47.95% |
Span: 219bp (35.3%) |
Frame: 2 |
| gi|133328|sp|P14248|RPB1_PLAFD DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT gi|66976|pir||RNZQ2L DNA-directed RNA p... |
| Match: gi|16805266|ref|NP_473294.1| |
score: 84.73 |
e-value: 1.4e-21 |
Identity: 47.95% |
Span: 219bp (35.3%) |
Frame: 2 |
| gi|16805266|ref|NP_473294.1| DNA-directed RNA polymerase II, putative [Plasmodium falciparum 3D7] gi|7494259|pir||T18... |
| Match: gi|23491122|gb|EAA22733.1| |
score: 82.8 |
e-value: 3.1e-21 |
Identity: 47.22% |
Span: 216bp (34.8%) |
Frame: 2 |
| gi|23491122|gb|EAA22733.1| RNA polymerase A/beta'/A'' subunit, putative [Plasmodium yoelii yoelii] |
| Match: gi|49085690|ref|XP_404946.1| |
score: 82.42 |
e-value: 3.5e-27 |
Identity: 49.32% |
Span: 219bp (35.3%) |
Frame: 2 |
| gi|49085690|ref|XP_404946.1| hypothetical protein AN0809.2 [Aspergillus nidulans FGSC A4] >gi|40746483|gb|EAA65639.1|... |
| Match: gi|49074728|ref|XP_401478.1| |
score: 82.42 |
e-value: 4e-25 |
Identity: 44.71% |
Span: 246bp (39.7%) |
Frame: 2 |
| gi|49074728|ref|XP_401478.1| hypothetical protein UM03863.1 [Ustilago maydis 521] >gi|46099536|gb|EAK84769.1| hypothe... |
| Match: gi|9955855|dbj|BAB12227.1| |
score: 81.65 |
e-value: 2.7e-27 |
Identity: 45.57% |
Span: 237bp (38.2%) |
Frame: 2 |
| gi|9955855|dbj|BAB12227.1| RNA polymerase II largest subunit [Aspergillus oryzae] |
| Match: gi|29539342|dbj|BAC67672.1| |
score: 76.64 |
e-value: 6e-23 |
Identity: 41.89% |
Span: 222bp (35.8%) |
Frame: 2 |
| gi|29539342|dbj|BAC67672.1| DNA-directed RNA polymerase II largest subunit [Cyanidioschyzon merolae] |
| Match: gi|47195286|emb|CAF94688.1| |
score: 73.17 |
e-value: 9.3e-22 |
Identity: 67.5% |
Span: 120bp (19.4%) |
Frame: 2 |
| gi|47195286|emb|CAF94688.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|38104302|gb|EAA50893.1| |
score: 66.63 |
e-value: 1.2e-20 |
Identity: 42.17% |
Span: 237bp (38.2%) |
Frame: 2 |
| gi|38104302|gb|EAA50893.1| hypothetical protein MG04652.4 [Magnaporthe grisea 70-15] |
| Match: gi|46441230|gb|EAL00529.1| |
score: 63.93 |
e-value: 3.7e-30 |
Identity: 41.25% |
Span: 210bp (33.9%) |
Frame: 3 |
| gi|46441230|gb|EAL00529.1| hypothetical protein CaO19.7655 [Candida albicans SC5314] |
| Match: gi|9955855|dbj|BAB12227.1| |
score: 62.77 |
e-value: 2.7e-27 |
Identity: 40.79% |
Span: 198bp (31.9%) |
Frame: 3 |
| gi|9955855|dbj|BAB12227.1| RNA polymerase II largest subunit [Aspergillus oryzae] |
| Match: gi|19112465|ref|NP_595673.1| |
score: 61.62 |
e-value: 1.1e-32 |
Identity: 52.24% |
Span: 171bp (27.6%) |
Frame: 3 |
| gi|19112465|ref|NP_595673.1| DNA-directed RNA polymerase II largest subunit [Schizosaccharomyces pombe] gi|548817|sp|... |
| Match: gi|49085690|ref|XP_404946.1| |
score: 61.62 |
e-value: 3.5e-27 |
Identity: 40.79% |
Span: 198bp (31.9%) |
Frame: 3 |
| gi|49085690|ref|XP_404946.1| hypothetical protein AN0809.2 [Aspergillus nidulans FGSC A4] >gi|40746483|gb|EAA65639.1|... |
| Match: gi|32417630|ref|XP_329293.1| |
score: 60.08 |
e-value: 5.2e-29 |
Identity: 39.24% |
Span: 207bp (33.4%) |
Frame: 3 |
| gi|32417630|ref|XP_329293.1| hypothetical protein [Neurospora crassa] gi|28925863|gb|EAA34861.1| hypothetical protein... |
| Match: gi|45187959|ref|NP_984182.1| |
score: 59.69 |
e-value: 6.7e-29 |
Identity: 42.11% |
Span: 198bp (31.9%) |
Frame: 3 |
| gi|45187959|ref|NP_984182.1| ADR086Cp [Eremothecium gossypii] >gi|44982743|gb|AAS52006.1| ADR086Cp [Eremothecium goss... |
| Match: gi|12642612|gb|AAK00310.1| |
score: 55.84 |
e-value: 1e-26 |
Identity: 49.23% |
Span: 171bp (27.6%) |
Frame: 3 |
| gi|12642612|gb|AAK00310.1| DNA-dependent RNA polymerase II largest subunit RPB1 [Glaucosphaera vacuolata] |
| Match: gi|38104302|gb|EAA50893.1| |
score: 55.45 |
e-value: 1.2e-20 |
Identity: 38.03% |
Span: 183bp (29.5%) |
Frame: 3 |
| gi|38104302|gb|EAA50893.1| hypothetical protein MG04652.4 [Magnaporthe grisea 70-15] |
| Match: gi|279533|pir||RNFF2L |
score: 55.45 |
e-value: 1.3e-30 |
Identity: 45.07% |
Span: 183bp (29.5%) |
Frame: 3 |
| gi|279533|pir||RNFF2L DNA-directed RNA polymerase (EC 2.7.7.6) II 215K chain [validated] - fruit fly (Drosophila mela... |
| Match: gi|17530899|ref|NP_511124.1| |
score: 55.45 |
e-value: 1.3e-30 |
Identity: 45.07% |
Span: 183bp (29.5%) |
Frame: 3 |
| gi|17530899|ref|NP_511124.1| RNA polymerase II 215kD subunit CG1554-PA [Drosophila melanogaster] gi|14286163|sp|P0405... |
| Match: gi|158321|gb|AAA28863.1| |
score: 55.45 |
e-value: 1.3e-30 |
Identity: 45.07% |
Span: 183bp (29.5%) |
Frame: 3 |
| gi|158321|gb|AAA28863.1| large subunit of RNA polymerase II |
| Match: gi|4808164|emb|CAB42795.1| |
score: 55.45 |
e-value: 1.7e-30 |
Identity: 45.07% |
Span: 183bp (29.5%) |
Frame: 3 |
| gi|4808164|emb|CAB42795.1| largest subunit of the RNA polymerase II complex [Drosophila guanche] |
| Match: gi|4808162|emb|CAB42796.1| |
score: 55.45 |
e-value: 1.7e-30 |
Identity: 45.07% |
Span: 183bp (29.5%) |
Frame: 3 |
| gi|4808162|emb|CAB42796.1| largest subunit of the RNA polymerase II complex [Drosophila madeirensis] |
| Match: gi|4808177|emb|CAB42800.1| |
score: 55.45 |
e-value: 1.7e-30 |
Identity: 45.07% |
Span: 183bp (29.5%) |
Frame: 3 |
| gi|4808177|emb|CAB42800.1| largest subunit of the RNA polymerase II complex [Drosophila subobscura] gi|9587179|gb|AAF... |
| Match: gi|40217261|emb|CAD67612.1| |
score: 55.45 |
e-value: 1.8e-26 |
Identity: 45.07% |
Span: 183bp (29.5%) |
Frame: 3 |
| gi|40217261|emb|CAD67612.1| largest subunit of RNA polymerase II [Drosophila pseudoobscura] |
| Match: gi|39580358|emb|CAE61463.1| |
score: 55.07 |
e-value: 1.1e-06 |
Identity: 40.74% |
Span: 219bp (35.3%) |
Frame: 3 |
| gi|39580358|emb|CAE61463.1| Hypothetical protein CBG05355 [Caenorhabditis briggsae] |
| Match: gi|102468|pir||A34092 |
score: 55.07 |
e-value: 1.1e-06 |
Identity: 42.11% |
Span: 204bp (32.9%) |
Frame: 3 |
| gi|102468|pir||A34092 DNA-directed RNA polymerase (EC 2.7.7.6) II large chain - Caenorhabditis elegans gi|156405|gb|A... |
| Match: gi|21542435|sp|P16356|RPB1_CAEEL |
score: 55.07 |
e-value: 1.1e-06 |
Identity: 42.11% |
Span: 204bp (32.9%) |
Frame: 3 |
| gi|21542435|sp|P16356|RPB1_CAEEL DNA-directed RNA polymerase II largest subunit gi|14574184|gb|AAA96158.2| Amanitin r... |
| Match: gi|49074728|ref|XP_401478.1| |
score: 54.68 |
e-value: 4e-25 |
Identity: 49.18% |
Span: 156bp (25.2%) |
Frame: 3 |
| gi|49074728|ref|XP_401478.1| hypothetical protein UM03863.1 [Ustilago maydis 521] >gi|46099536|gb|EAK84769.1| hypothe... |
| Match: gi|6320061|ref|NP_010141.1| |
score: 54.3 |
e-value: 3.8e-26 |
Identity: 40.85% |
Span: 183bp (29.5%) |
Frame: 3 |
| gi|6320061|ref|NP_010141.1| RNA polymerase II large subunit; Rpo21p [Saccharomyces cerevisiae] gi|2507347|sp|P04050|R... |
| Match: gi|4398|emb|CAA26904.1| |
score: 54.3 |
e-value: 3.8e-26 |
Identity: 40.85% |
Span: 183bp (29.5%) |
Frame: 3 |
| gi|4398|emb|CAA26904.1| put. RNA polymerase II largest subunit [Saccharomyces cerevisiae] |
| Match: gi|31226322|ref|XP_317690.1| |
score: 54.3 |
e-value: 1.4e-29 |
Identity: 45.07% |
Span: 183bp (29.5%) |
Frame: 3 |
| gi|31226322|ref|XP_317690.1| ENSANGP00000010305 [Anopheles gambiae] gi|21300163|gb|EAA12308.1| ENSANGP00000010305 [An... |
| Match: gi|29539342|dbj|BAC67672.1| |
score: 53.14 |
e-value: 6e-23 |
Identity: 41.67% |
Span: 192bp (31.0%) |
Frame: 3 |
| gi|29539342|dbj|BAC67672.1| DNA-directed RNA polymerase II largest subunit [Cyanidioschyzon merolae] |
| Match: gi|47195286|emb|CAF94688.1| |
score: 52.76 |
e-value: 9.3e-22 |
Identity: 43.94% |
Span: 168bp (27.1%) |
Frame: 3 |
| gi|47195286|emb|CAF94688.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|46108068|ref|XP_381092.1| |
score: 51.6 |
e-value: 1.6e-27 |
Identity: 37.97% |
Span: 207bp (33.4%) |
Frame: 3 |
| gi|46108068|ref|XP_381092.1| hypothetical protein FG00916.1 [Gibberella zeae PH-1] >gi|42544725|gb|EAA67568.1| hypoth... |
| Match: gi|45501363|gb|AAH67295.1| |
score: 51.6 |
e-value: 1e-30 |
Identity: 42.42% |
Span: 168bp (27.1%) |
Frame: 3 |
| gi|45501363|gb|AAH67295.1| Unknown (protein for MGC:75453) [Homo sapiens] |
| Match: gi|34871645|ref|XP_343923.1| |
score: 51.6 |
e-value: 9.9e-31 |
Identity: 42.42% |
Span: 168bp (27.1%) |
Frame: 3 |
| gi|34871645|ref|XP_343923.1| similar to DNA-directed RNA polymerase II largest subunit (RPB1) [Rattus norvegicus] |
| Match: gi|7434727|pir||I38186 |
score: 51.6 |
e-value: 9.9e-31 |
Identity: 42.42% |
Span: 168bp (27.1%) |
Frame: 3 |
| gi|7434727|pir||I38186 RNA polymerase II largest subunit - human gi|825713|emb|CAA52862.1| RNA polymerase II largest ... |
| Match: gi|6677795|ref|NP_033115.1| |
score: 51.6 |
e-value: 9.9e-31 |
Identity: 42.42% |
Span: 168bp (27.1%) |
Frame: 3 |
| gi|6677795|ref|NP_033115.1| polymerase (RNA) II (DNA directed) polypeptide A; RNA polymerase II 1 [Mus musculus] gi|9... |
| Match: gi|2443334|dbj|BAA22376.1| |
score: 51.6 |
e-value: 9.9e-31 |
Identity: 42.42% |
Span: 168bp (27.1%) |
Frame: 3 |
| gi|2443334|dbj|BAA22376.1| RNA polymerase II largest subunit [Cricetulus griseus] |
| Match: gi|133327|sp|P08775|RPB1_MOUSE |
score: 51.6 |
e-value: 9.9e-31 |
Identity: 42.42% |
Span: 168bp (27.1%) |
Frame: 3 |
| gi|133327|sp|P08775|RPB1_MOUSE DNA-directed RNA polymerase II largest subunit (RPB1) |
| Match: gi|2145091|gb|AAB58418.1| |
score: 51.6 |
e-value: 9.9e-31 |
Identity: 42.42% |
Span: 168bp (27.1%) |
Frame: 3 |
| gi|2145091|gb|AAB58418.1| RNA polymerase II largest subunit |
| Match: gi|4505939|ref|NP_000928.1| |
score: 51.6 |
e-value: 9.9e-31 |
Identity: 42.42% |
Span: 168bp (27.1%) |
Frame: 3 |
| gi|4505939|ref|NP_000928.1| DNA directed RNA polymerase II polypeptide A; polymerase (RNA) II (DNA directed) polypept... |
| Match: gi|133325|sp|P28364|RPB1_EUPOC |
score: 45.82 |
e-value: 5.4e-25 |
Identity: 33.85% |
Span: 171bp (27.6%) |
Frame: 3 |
| gi|133325|sp|P28364|RPB1_EUPOC DNA-directed RNA polymerase II largest subunit gi|479436|pir||S33886 DNA-directed RNA ... |
| Match: gi|46228363|gb|EAK89262.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 30.59% |
Span: 231bp (37.3%) |
Frame: 3 |
| gi|46228363|gb|EAK89262.1| putative DNA-directed RNA polymerase,possible RNA polymerase A/beta'/A'' subunit, long PHY... |
| Match: gi|23491122|gb|EAA22733.1| |
score: 41.2 |
e-value: 3.1e-21 |
Identity: 29.11% |
Span: 213bp (34.4%) |
Frame: 3 |
| gi|23491122|gb|EAA22733.1| RNA polymerase A/beta'/A'' subunit, putative [Plasmodium yoelii yoelii] |
| Match: gi|16805266|ref|NP_473294.1| |
score: 40.43 |
e-value: 1.4e-21 |
Identity: 29.73% |
Span: 198bp (31.9%) |
Frame: 3 |
| gi|16805266|ref|NP_473294.1| DNA-directed RNA polymerase II, putative [Plasmodium falciparum 3D7] gi|7494259|pir||T18... |
| Match: gi|133328|sp|P14248|RPB1_PLAFD |
score: 40.43 |
e-value: 1.4e-21 |
Identity: 29.73% |
Span: 198bp (31.9%) |
Frame: 3 |
| gi|133328|sp|P14248|RPB1_PLAFD DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT gi|66976|pir||RNZQ2L DNA-directed RNA p... |
|
| 68 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 5 hits recorded |
| Match: At4g35800.1 |
score: 132.9 |
e-value: 5.7e-57 |
Identity: 73.75% |
Span: 237bp (38.2%) |
Frame: 2 |
| At4g35800.1 68411.m04623 DNA-directed RNA polymerase (EC 2.7.7.6) II largest chain |
| Match: At4g35800.1 |
score: 105.9 |
e-value: 5.7e-57 |
Identity: 69.23% |
Span: 210bp (33.9%) |
Frame: 3 |
| At4g35800.1 68411.m04623 DNA-directed RNA polymerase (EC 2.7.7.6) II largest chain |
| Match: At5g60040.1 |
score: 54.3 |
e-value: 1.3e-10 |
Identity: 46.34% |
Span: 123bp (19.8%) |
Frame: 2 |
| At5g60040.1 68412.m06815 DNA-directed RNA polymerase - like protein DNA-directed RNA polymerase, Saccharomyces cerevi... |
| Match: At3g57660.1 |
score: 38.89 |
e-value: 0.002 |
Identity: 34.88% |
Span: 129bp (20.8%) |
Frame: 2 |
| At3g57660.1 68410.m05937 DNA-directed RNA polymerase I 190K chain - like protein DNA-directed RNA polymerase(EC 2.7.7... |
| Match: At5g60040.1 |
score: 28.49 |
e-value: 1.3e-10 |
Identity: 25.76% |
Span: 171bp (27.6%) |
Frame: 3 |
| At5g60040.1 68412.m06815 DNA-directed RNA polymerase - like protein DNA-directed RNA polymerase, Saccharomyces cerevi... |
|
