| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|224134074|ref|XP_002327749.1| |
score: 109 |
e-value: 2e-22 |
Identity: 42.34% |
Span: 408bp (65.7%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222836834|gb|EEE75227.1| predicted protein [Populus trichocarpa] |
| Match: gi|255586301|ref|XP_002533802.1| |
score: 104 |
e-value: 7e-21 |
Identity: 47.17% |
Span: 462bp (74.4%) |
Frame: 2 |
| cellular nucleic acid binding protein, putative [Ricinus communis] >gi223526275|gb|EEF28589.1| cellular nucleic acid ... |
| Match: gi|224074255|ref|XP_002304323.1| |
score: 104 |
e-value: 7e-21 |
Identity: 45.45% |
Span: 393bp (63.3%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222841755|gb|EEE79302.1| predicted protein [Populus trichocarpa] |
| Match: gi|242063850|ref|XP_002453214.1| |
score: 103 |
e-value: 1e-20 |
Identity: 49.26% |
Span: 387bp (62.3%) |
Frame: 2 |
| hypothetical protein SORBIDRAFT_04g001720 [Sorghum bicolor] >gi241933045|gb|EES06190.1| hypothetical protein SORBIDRA... |
| Match: gi|223946111|gb|ACN27139.1| |
score: 102 |
e-value: 2e-20 |
Identity: 52.17% |
Span: 468bp (75.4%) |
Frame: 2 |
| unknown [Zea mays] |
| Match: gi|225431120|ref|XP_002266115.1| |
score: 102 |
e-value: 3e-20 |
Identity: 50.61% |
Span: 462bp (74.4%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|238015158|gb|ACR38614.1| |
score: 102 |
e-value: 4e-20 |
Identity: 50.37% |
Span: 387bp (62.3%) |
Frame: 2 |
| unknown [Zea mays] |
| Match: gi|224033945|gb|ACN36048.1| |
score: 102 |
e-value: 4e-20 |
Identity: 50.37% |
Span: 387bp (62.3%) |
Frame: 2 |
| unknown [Zea mays] |
| Match: gi|226495947|ref|NP_001141714.1| |
score: 102 |
e-value: 4e-20 |
Identity: 50.37% |
Span: 387bp (62.3%) |
Frame: 2 |
| hypothetical protein LOC100273843 [Zea mays] >gi194705650|gb|ACF86909.1| unknown [Zea mays] |
| Match: gi|226507970|ref|NP_001140374.1| |
score: 102 |
e-value: 4e-20 |
Identity: 50.37% |
Span: 387bp (62.3%) |
Frame: 2 |
| hypothetical protein LOC100272427 [Zea mays] >gi194699220|gb|ACF83694.1| unknown [Zea mays] |
| Match: gi|147791391|emb|CAN59784.1| |
score: 102 |
e-value: 4e-20 |
Identity: 48.51% |
Span: 393bp (63.3%) |
Frame: 2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|115443871|ref|NP_001045715.1| |
score: 102 |
e-value: 4e-20 |
Identity: 50% |
Span: 387bp (62.3%) |
Frame: 2 |
| Os02g0121100 [Oryza sativa (japonica cultivar-group)] >gi41052630|dbj|BAD08139.1| putative Glycine-rich protein 2 [Or... |
| Match: gi|76577745|gb|ABA54143.1| |
score: 97.1 |
e-value: 1e-18 |
Identity: 46.09% |
Span: 381bp (61.4%) |
Frame: 2 |
| putative glycine-rich protein [Picea glauca] |
| Match: gi|218189944|gb|EEC72371.1| |
score: 96.3 |
e-value: 2e-18 |
Identity: 63.01% |
Span: 216bp (34.8%) |
Frame: 2 |
| hypothetical protein OsI_05633 [Oryza sativa Indica Group] |
| Match: gi|18398546|ref|NP_565427.1| |
score: 95.5 |
e-value: 3e-18 |
Identity: 41.13% |
Span: 411bp (66.2%) |
Frame: 2 |
| cold-shock DNA-binding family protein [Arabidopsis thaliana] >gi14334920|gb|AAK59638.1| putative glycine-rich, zinc-f... |
| Match: gi|270255514|emb|CBI37898.1| |
score: 95.1 |
e-value: 4e-18 |
Identity: 60.81% |
Span: 219bp (35.3%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225427973|ref|XP_002277628.1| |
score: 95.1 |
e-value: 4e-18 |
Identity: 60.81% |
Span: 219bp (35.3%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|223973253|gb|ACN30814.1| |
score: 95.1 |
e-value: 4e-18 |
Identity: 61.64% |
Span: 216bp (34.8%) |
Frame: 2 |
| unknown [Zea mays] |
| Match: gi|147856673|emb|CAN81359.1| |
score: 95.1 |
e-value: 4e-18 |
Identity: 60.81% |
Span: 219bp (35.3%) |
Frame: 2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147812546|emb|CAN68380.1| |
score: 94.7 |
e-value: 6e-18 |
Identity: 43.66% |
Span: 402bp (64.7%) |
Frame: 2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|226531123|ref|NP_001151606.1| |
score: 93.2 |
e-value: 2e-17 |
Identity: 61.33% |
Span: 222bp (35.7%) |
Frame: 2 |
| LOC100285240 [Zea mays] >gi195638850|gb|ACG38893.1| glycine-rich protein 2b [Zea mays] |
| Match: gi|195609518|gb|ACG26589.1| |
score: 93.2 |
e-value: 2e-17 |
Identity: 61.33% |
Span: 222bp (35.7%) |
Frame: 2 |
| glycine-rich protein 2b [Zea mays] |
| Match: gi|15233440|ref|NP_195326.1| |
score: 92.4 |
e-value: 3e-17 |
Identity: 48.57% |
Span: 387bp (62.3%) |
Frame: 2 |
| CSDP1 (cold shock domain protein 1); RNA binding / double-stranded DNA binding / nucleic acid binding / single-strand... |
| Match: gi|195648068|gb|ACG43502.1| |
score: 92 |
e-value: 4e-17 |
Identity: 61.33% |
Span: 222bp (35.7%) |
Frame: 2 |
| glycine-rich protein 2b [Zea mays] |
| Match: gi|224063128|ref|XP_002301004.1| |
score: 90.9 |
e-value: 8e-17 |
Identity: 47.76% |
Span: 390bp (62.8%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222842730|gb|EEE80277.1| predicted protein [Populus trichocarpa] |
|
| 97 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 4 hits recorded |
| Match: At2G17870.1 |
score: 95.5 |
e-value: 2e-20 |
Identity: 41.13% |
Span: 411bp (66.2%) |
Frame: 2 |
| cold-shock DNA-binding family protein | chr2:7771358-7772263 REVERSE |
| Match: At4G36020.1 |
score: 92.4 |
e-value: 2e-19 |
Identity: 48.57% |
Span: 387bp (62.3%) |
Frame: 2 |
| Symbols: CSDP1 | CSDP1 (COLD SHOCK DOMAIN PROTEIN 1); nucleic acid binding | chr4:17043446-17044345 REVERSE |
| Match: At4G38680.1 |
score: 90.5 |
e-value: 7e-19 |
Identity: 45.19% |
Span: 381bp (61.4%) |
Frame: 2 |
| Symbols: CSDP2, GRP2 | GRP2 (COLD SHOCK DOMAIN PROTEIN 2); nucleic acid binding | chr4:18072234-18072845 REVERSE |
| Match: At2G21060.1 |
score: 81.6 |
e-value: 3e-16 |
Identity: 41.43% |
Span: 387bp (62.3%) |
Frame: 2 |
| Symbols: ATGRP2B | ATGRP2B (GLYCINE-RICH PROTEIN 2B); nucleic acid binding | chr2:9044064-9044669 REVERSE |
|
| swissprot [blastx] | Showing best 18 hits recorded |
| Match: P27484 |
score: 90.5 |
e-value: 7e-18 |
Identity: 60.26% |
Span: 228bp (36.7%) |
Frame: 2 |
| Glycine-rich protein 2 OS=Nicotiana sylvestris GN=GRP-2 PE=2 SV=1 |
| Match: Q38896 |
score: 81.6 |
e-value: 3e-15 |
Identity: 41.43% |
Span: 387bp (62.3%) |
Frame: 2 |
| Glycine-rich protein 2b OS=Arabidopsis thaliana GN=GRP2B PE=2 SV=1 |
| Match: P0A9Y4 |
score: 74.3 |
e-value: 5e-13 |
Identity: 62.96% |
Span: 162bp (26.1%) |
Frame: 2 |
| Cold shock protein cspA OS=Shigella flexneri GN=cspA PE=2 SV=2 |
| Match: P0A9Y2 |
score: 74.3 |
e-value: 5e-13 |
Identity: 62.96% |
Span: 162bp (26.1%) |
Frame: 2 |
| Cold shock protein cspA OS=Salmonella typhimurium GN=cspA PE=2 SV=2 |
| Match: P0A9Y3 |
score: 74.3 |
e-value: 5e-13 |
Identity: 62.96% |
Span: 162bp (26.1%) |
Frame: 2 |
| Cold shock protein cspA OS=Salmonella typhi GN=cspA PE=2 SV=2 |
| Match: P0A9Y5 |
score: 74.3 |
e-value: 5e-13 |
Identity: 62.96% |
Span: 162bp (26.1%) |
Frame: 2 |
| Cold shock protein cspA OS=Salmonella enteritidis GN=cspA PE=2 SV=2 |
| Match: P0A9X9 |
score: 74.3 |
e-value: 5e-13 |
Identity: 62.96% |
Span: 162bp (26.1%) |
Frame: 2 |
| Cold shock protein cspA OS=Escherichia coli (strain K12) GN=cspA PE=1 SV=2 |
| Match: P0A9Y0 |
score: 74.3 |
e-value: 5e-13 |
Identity: 62.96% |
Span: 162bp (26.1%) |
Frame: 2 |
| Cold shock protein cspA OS=Escherichia coli O6 GN=cspA PE=2 SV=2 |
| Match: P0A9Y1 |
score: 74.3 |
e-value: 5e-13 |
Identity: 62.96% |
Span: 162bp (26.1%) |
Frame: 2 |
| Cold shock protein cspA OS=Escherichia coli O157:H7 GN=cspA PE=2 SV=2 |
| Match: P36995 |
score: 69.7 |
e-value: 1e-11 |
Identity: 57.41% |
Span: 162bp (26.1%) |
Frame: 2 |
| Cold shock-like protein cspB OS=Escherichia coli (strain K12) GN=cspB PE=2 SV=1 |
| Match: Q89A90 |
score: 67.8 |
e-value: 5e-11 |
Identity: 55.56% |
Span: 162bp (26.1%) |
Frame: 2 |
| Cold shock-like protein cspE OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=cspE PE=3 SV=3 |
| Match: P63238 |
score: 67.8 |
e-value: 5e-11 |
Identity: 55.56% |
Span: 162bp (26.1%) |
Frame: 2 |
| Cold shock-like protein cspE OS=Buchnera aphidicola subsp. Schizaphis graminum GN=cspE PE=3 SV=2 |
| Match: P63237 |
score: 67.8 |
e-value: 5e-11 |
Identity: 55.56% |
Span: 162bp (26.1%) |
Frame: 2 |
| Cold shock-like protein cspE OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=cspE PE=3 SV=2 |
| Match: P72366 |
score: 67.8 |
e-value: 5e-11 |
Identity: 60.78% |
Span: 153bp (24.6%) |
Frame: 2 |
| Cold shock-like protein cspA OS=Stigmatella aurantiaca GN=cspA PE=3 SV=1 |
| Match: P0A975 |
score: 67.4 |
e-value: 7e-11 |
Identity: 53.7% |
Span: 162bp (26.1%) |
Frame: 2 |
| Cold shock-like protein cspE OS=Shigella flexneri GN=cspE PE=3 SV=2 |
| Match: P0A972 |
score: 67.4 |
e-value: 7e-11 |
Identity: 53.7% |
Span: 162bp (26.1%) |
Frame: 2 |
| Cold shock-like protein cspE OS=Escherichia coli (strain K12) GN=cspE PE=1 SV=2 |
| Match: P0A973 |
score: 67.4 |
e-value: 7e-11 |
Identity: 53.7% |
Span: 162bp (26.1%) |
Frame: 2 |
| Cold shock-like protein cspE OS=Escherichia coli O6 GN=cspE PE=3 SV=2 |
| Match: P0A974 |
score: 67.4 |
e-value: 7e-11 |
Identity: 53.7% |
Span: 162bp (26.1%) |
Frame: 2 |
| Cold shock-like protein cspE OS=Escherichia coli O157:H7 GN=cspE PE=3 SV=2 |
|
