| arabidopsis/peptide [blastx] | Showing best 7 hits recorded |
| Match: At5G06770.1 |
score: 135 |
e-value: 2e-32 |
Identity: 45.7% |
Span: 552bp (88.6%) |
Frame: 2 |
| KH domain-containing protein / zinc finger (CCCH type) family protein | chr5:2090938-2092788 REVERSE |
| Match: At3G12130.1 |
score: 132 |
e-value: 2e-31 |
Identity: 45.08% |
Span: 570bp (91.5%) |
Frame: 2 |
| KH domain-containing protein / zinc finger (CCCH type) family protein | chr3:3864492-3866412 REVERSE |
| Match: At1G32360.1 |
score: 61.2 |
e-value: 8e-10 |
Identity: 29.01% |
Span: 405bp (65.0%) |
Frame: 2 |
| zinc finger (CCCH-type) family protein | chr1:11673305-11675142 FORWARD |
| Match: At2G35430.1 |
score: 54.3 |
e-value: 9e-08 |
Identity: 34.35% |
Span: 324bp (52.0%) |
Frame: 2 |
| zinc finger (CCCH-type) family protein | chr2:14908093-14909336 REVERSE |
| Match: At3G19360.1 |
score: 54.3 |
e-value: 9e-08 |
Identity: 28.7% |
Span: 270bp (43.3%) |
Frame: 2 |
| zinc finger (CCCH-type) family protein | chr3:6707550-6708870 FORWARD |
| Match: At1G32360.1 |
score: 47.8 |
e-value: 9e-06 |
Identity: 28.38% |
Span: 381bp (61.2%) |
Frame: 2 |
| zinc finger (CCCH-type) family protein | chr1:11673305-11675142 FORWARD |
| Match: At5G18550.1 |
score: 44.7 |
e-value: 7e-05 |
Identity: 28.18% |
Span: 330bp (53.0%) |
Frame: 2 |
| nucleic acid binding | chr5:6160517-6162731 FORWARD |
|
| 16 lower scoring hits censored -- only 7 best hits are stored. |
| genbank/nr [blastx] | Showing best 28 hits recorded |
| Match: gi|50905911|ref|XP_464444.1| |
score: 189 |
e-value: 2e-46 |
Identity: 55.79% |
Span: 531bp (85.2%) |
Frame: 2 |
| gi|50905911|ref|XP_464444.1| KH domain-containing protein-like [Oryza sativa (japonica cultivar-group)] >gi|46389843|... |
| Match: gi|50929447|ref|XP_474251.1| |
score: 187 |
e-value: 4e-46 |
Identity: 54.97% |
Span: 543bp (87.2%) |
Frame: 2 |
| gi|50929447|ref|XP_474251.1| OSJNBa0087O24.9 [Oryza sativa (japonica cultivar-group)] >gi|32488659|emb|CAE03586.1| OS... |
| Match: gi|51090454|dbj|BAD35424.1| |
score: 171 |
e-value: 5e-41 |
Identity: 51.09% |
Span: 531bp (85.2%) |
Frame: 2 |
| gi|51090454|dbj|BAD35424.1| KH domain-containing protein / zinc finger protein-like [Oryza sativa (japonica cultivar-... |
| Match: gi|15240145|ref|NP_196295.1| |
score: 135 |
e-value: 2e-30 |
Identity: 45.7% |
Span: 552bp (88.6%) |
Frame: 2 |
| KH domain-containing protein / zinc finger (CCCH type) family protein [Arabidopsis thaliana] >gi75262408|sp|Q9FG30.1|... |
| Match: gi|21555233|gb|AAM63810.1| |
score: 135 |
e-value: 2e-30 |
Identity: 45.7% |
Span: 552bp (88.6%) |
Frame: 2 |
| unknown [Arabidopsis thaliana] |
| Match: gi|18399496|ref|NP_566412.1| |
score: 132 |
e-value: 2e-29 |
Identity: 45.08% |
Span: 570bp (91.5%) |
Frame: 2 |
| KH domain-containing protein / zinc finger (CCCH type) family protein [Arabidopsis thaliana] >gi75268236|sp|Q9C7C3.1|... |
| Match: gi|9294110|dbj|BAB01961.1| |
score: 111 |
e-value: 4e-23 |
Identity: 41.18% |
Span: 510bp (81.9%) |
Frame: 2 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|92869561|gb|ABE79187.1| |
score: 62 |
e-value: 3e-08 |
Identity: 32.48% |
Span: 270bp (43.3%) |
Frame: 2 |
| Zinc |
| Match: gi|92081526|dbj|BAE93310.1| |
score: 61.2 |
e-value: 6e-08 |
Identity: 30% |
Span: 270bp (43.3%) |
Frame: 2 |
| zinc |
| Match: gi|18398397|ref|NP_564396.1| |
score: 61.2 |
e-value: 6e-08 |
Identity: 29.01% |
Span: 405bp (65.0%) |
Frame: 2 |
| zinc finger (CCCH-type) family protein [Arabidopsis thaliana] >gi75264181|sp|Q9LQM3.1|C3H12_ARATH RecName: Full=Zinc ... |
| Match: gi|19547999|gb|AAL87363.1| |
score: 61.2 |
e-value: 6e-08 |
Identity: 29.01% |
Span: 405bp (65.0%) |
Frame: 2 |
| gi|19547999|gb|AAL87363.1| At1g32359/F27G20.10 [Arabidopsis thaliana] >gi|15912259|gb|AAL08263.1| At1g32359/F27G20.10... |
| Match: gi|50941347|ref|XP_480201.1| |
score: 60.8 |
e-value: 7e-08 |
Identity: 33.06% |
Span: 291bp (46.7%) |
Frame: 2 |
| gi|50941347|ref|XP_480201.1| putative zinc finger protein [Oryza sativa (japonica cultivar-group)] >gi|37806157|dbj|B... |
| Match: gi|92869561|gb|ABE79187.1| |
score: 60.5 |
e-value: 1e-07 |
Identity: 28.02% |
Span: 498bp (79.9%) |
Frame: 2 |
| Zinc |
| Match: gi|50941347|ref|XP_480201.1| |
score: 58.5 |
e-value: 4e-07 |
Identity: 28.89% |
Span: 474bp (76.1%) |
Frame: 2 |
| gi|50941347|ref|XP_480201.1| putative zinc finger protein [Oryza sativa (japonica cultivar-group)] >gi|37806157|dbj|B... |
| Match: gi|92881973|gb|ABE86497.1| |
score: 58.5 |
e-value: 4e-07 |
Identity: 30.46% |
Span: 408bp (65.5%) |
Frame: 2 |
| Zinc |
| Match: gi|92884411|gb|ABE87354.1| |
score: 56.6 |
e-value: 1e-06 |
Identity: 29.23% |
Span: 363bp (58.3%) |
Frame: 2 |
| Zinc |
| Match: gi|50254918|gb|EAL17658.1| |
score: 55.5 |
e-value: 3e-06 |
Identity: 40% |
Span: 255bp (40.9%) |
Frame: 2 |
| gi|50254918|gb|EAL17658.1| hypothetical protein CNBL1730 [Cryptococcus neoformans var. neoformans B-3501A] |
| Match: gi|57228607|gb|AAW45042.1| |
score: 55.5 |
e-value: 3e-06 |
Identity: 40% |
Span: 255bp (40.9%) |
Frame: 2 |
| gi|57228607|gb|AAW45042.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21] >gi|58270386|ref|XP_5723... |
| Match: gi|92884421|gb|ABE87364.1| |
score: 55.5 |
e-value: 3e-06 |
Identity: 35.29% |
Span: 261bp (41.9%) |
Frame: 2 |
| Zinc |
| Match: gi|18129298|emb|CAC83362.1| |
score: 54.7 |
e-value: 5e-06 |
Identity: 46.15% |
Span: 156bp (25.0%) |
Frame: 2 |
| gi|18129298|emb|CAC83362.1| similarity to the EST C99174 [Pinus pinaster] |
| Match: gi|3608145|gb|AAC36178.1| |
score: 54.3 |
e-value: 7e-06 |
Identity: 34.35% |
Span: 324bp (52.0%) |
Frame: 2 |
| gi|3608145|gb|AAC36178.1| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|18402211|ref|NP_566631.1| |
score: 54.3 |
e-value: 7e-06 |
Identity: 28.7% |
Span: 270bp (43.3%) |
Frame: 2 |
| zinc finger (CCCH-type) family protein [Arabidopsis thaliana] >gi75274079|sp|Q9LT81.1|C3H39_ARATH RecName: Full=Zinc ... |
| Match: gi|56121890|gb|AAV74226.1| |
score: 54.3 |
e-value: 7e-06 |
Identity: 34.35% |
Span: 324bp (52.0%) |
Frame: 2 |
| gi|56121890|gb|AAV74226.1| At2g35430 [Arabidopsis thaliana] >gi|58331803|gb|AAW70399.1| At2g35430 [Arabidopsis thalia... |
| Match: gi|50934133|ref|XP_476594.1| |
score: 53.5 |
e-value: 1e-05 |
Identity: 33.33% |
Span: 276bp (44.3%) |
Frame: 2 |
| hypothetical |
| Match: gi|51090454|dbj|BAD35424.1| |
score: 51.2 |
e-value: 6e-05 |
Identity: 44.44% |
Span: 162bp (26.0%) |
Frame: 2 |
| gi|51090454|dbj|BAD35424.1| KH domain-containing protein / zinc finger protein-like [Oryza sativa (japonica cultivar-... |
| Match: gi|76155630|gb|AAX26921.2| |
score: 50.4 |
e-value: 0.0001 |
Identity: 75% |
Span: 84bp (13.5%) |
Frame: 2 |
| SJCHGC09205 |
| Match: gi|52548268|gb|AAU82118.1| |
score: 50.4 |
e-value: 0.0001 |
Identity: 34.12% |
Span: 255bp (40.9%) |
Frame: 2 |
| POS-1 |
| Match: gi|92884417|gb|ABE87360.1| |
score: 50.4 |
e-value: 0.0001 |
Identity: 29.17% |
Span: 363bp (58.3%) |
Frame: 2 |
| Zinc |
|
| 114 lower scoring hits censored -- only 28 best hits are stored. |
