| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|27901709|gb|AAO26690.1| |
score: 91.28 |
e-value: 7.1e-36 |
Identity: 72.13% |
Span: 183bp (29.3%) |
Frame: 2 |
| gi|27901709|gb|AAO26690.1| gag-pol polyprotein [Vitis vinifera] |
| Match: gi|27901694|gb|AAO26683.1| |
score: 91.28 |
e-value: 7.1e-36 |
Identity: 72.13% |
Span: 183bp (29.3%) |
Frame: 2 |
| gi|27901694|gb|AAO26683.1| gag-pol polyprotein [Vitis vinifera] |
| Match: gi|27901696|gb|AAO26684.1| |
score: 91.28 |
e-value: 1.9e-36 |
Identity: 72.13% |
Span: 183bp (29.3%) |
Frame: 2 |
| gi|27901696|gb|AAO26684.1| gag-pol polyprotein [Vitis vinifera] |
| Match: gi|15226657|ref|NP_179198.1| |
score: 63.93 |
e-value: 4e-18 |
Identity: 50.85% |
Span: 177bp (28.4%) |
Frame: 2 |
| gi|15226657|ref|NP_179198.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301694|pir||E84535 pro... |
| Match: gi|15235193|ref|NP_193713.1| |
score: 60.46 |
e-value: 9.4e-17 |
Identity: 50.85% |
Span: 177bp (28.4%) |
Frame: 2 |
| gi|15235193|ref|NP_193713.1| LTR retrotransposon -related [Arabidopsis thaliana] |
| Match: gi|25301682|pir||G86301 |
score: 60.46 |
e-value: 9.1e-15 |
Identity: 47.54% |
Span: 183bp (29.3%) |
Frame: 2 |
| gi|25301682|pir||G86301 probable retroelement polyprotein [imported] - Arabidopsis thaliana gi|9989054|gb|AAG10817.1|... |
| Match: gi|7487067|pir||T04759 |
score: 60.46 |
e-value: 1.6e-16 |
Identity: 50.85% |
Span: 177bp (28.4%) |
Frame: 2 |
| gi|7487067|pir||T04759 hypothetical protein T16H5.140 - Arabidopsis thaliana (fragment) gi|25301704|pir||C85224 prob... |
| Match: gi|15236074|ref|NP_193475.1| |
score: 60.46 |
e-value: 1.5e-16 |
Identity: 50.85% |
Span: 177bp (28.4%) |
Frame: 2 |
| gi|15236074|ref|NP_193475.1| retrotransposon like protein [Arabidopsis thaliana] gi|7444421|pir||A71444 probable LTR ... |
| Match: gi|15226638|ref|NP_179187.1| |
score: 59.69 |
e-value: 1.1e-16 |
Identity: 45.9% |
Span: 183bp (29.3%) |
Frame: 2 |
| gi|15226638|ref|NP_179187.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301676|pir||B84534 pro... |
| Match: gi|27901696|gb|AAO26684.1| |
score: 58.92 |
e-value: 1.9e-36 |
Identity: 60.87% |
Span: 138bp (22.1%) |
Frame: 3 |
| gi|27901696|gb|AAO26684.1| gag-pol polyprotein [Vitis vinifera] |
| Match: gi|15220244|ref|NP_175183.1| |
score: 58.15 |
e-value: 9.2e-16 |
Identity: 44.26% |
Span: 183bp (29.3%) |
Frame: 2 |
| gi|15220244|ref|NP_175183.1| polyprotein -related [Arabidopsis thaliana] |
| Match: gi|27901694|gb|AAO26683.1| |
score: 57 |
e-value: 7.1e-36 |
Identity: 68.42% |
Span: 114bp (18.3%) |
Frame: 3 |
| gi|27901694|gb|AAO26683.1| gag-pol polyprotein [Vitis vinifera] |
| Match: gi|27901709|gb|AAO26690.1| |
score: 57 |
e-value: 7.1e-36 |
Identity: 68.42% |
Span: 114bp (18.3%) |
Frame: 3 |
| gi|27901709|gb|AAO26690.1| gag-pol polyprotein [Vitis vinifera] |
| Match: gi|4996361|dbj|BAA78423.1| |
score: 56.61 |
e-value: 2e-14 |
Identity: 51.79% |
Span: 168bp (26.9%) |
Frame: 2 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|4996365|dbj|BAA78425.1| |
score: 56.61 |
e-value: 2e-14 |
Identity: 51.79% |
Span: 168bp (26.9%) |
Frame: 2 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|15217982|ref|NP_176146.1| |
score: 56.61 |
e-value: 2e-14 |
Identity: 51.79% |
Span: 168bp (26.9%) |
Frame: 2 |
| gi|15217982|ref|NP_176146.1| polyprotein -related [Arabidopsis thaliana] gi|14475946|gb|AAK62793.1| polyprotein, puta... |
| Match: gi|15218006|ref|NP_176154.1| |
score: 56.61 |
e-value: 2e-14 |
Identity: 51.79% |
Span: 168bp (26.9%) |
Frame: 2 |
| gi|15218006|ref|NP_176154.1| polyprotein -related [Arabidopsis thaliana] gi|14475941|gb|AAK62788.1| polyprotein, puta... |
| Match: gi|9759590|dbj|BAB11447.1| |
score: 56.61 |
e-value: 9.3e-16 |
Identity: 49.18% |
Span: 183bp (29.3%) |
Frame: 2 |
| gi|9759590|dbj|BAB11447.1| polyprotein-like [Arabidopsis thaliana] |
| Match: gi|27573360|gb|AAO20078.1| |
score: 55.84 |
e-value: 1.9e-15 |
Identity: 51.72% |
Span: 174bp (27.9%) |
Frame: 2 |
| gi|27573360|gb|AAO20078.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34914532|ref|NP_918613.1| |
score: 54.68 |
e-value: 4.2e-15 |
Identity: 51.79% |
Span: 168bp (26.9%) |
Frame: 2 |
| gi|34914532|ref|NP_918613.1| polyprotein [Oryza sativa (japonica cultivar-group)] gi|22093573|dbj|BAC06870.1| polypro... |
| Match: gi|30103001|gb|AAP21414.1| |
score: 54.68 |
e-value: 4.2e-15 |
Identity: 51.79% |
Span: 168bp (26.9%) |
Frame: 2 |
| putative polyprotein [Oryza sativa Japonica Group] >gi108711651|gb|ABF99446.1| retrotransposon protein, putative, unc... |
| Match: gi|32488892|emb|CAE03643.1| |
score: 54.68 |
e-value: 4.5e-15 |
Identity: 51.79% |
Span: 168bp (26.9%) |
Frame: 2 |
| gi|32488892|emb|CAE03643.1| OSJNBa0060N03.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|32489843|emb|CAE05707.1| |
score: 54.3 |
e-value: 2.5e-16 |
Identity: 51.79% |
Span: 168bp (26.9%) |
Frame: 2 |
| gi|32489843|emb|CAE05707.1| OSJNBb0065J09.3 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|8843739|dbj|BAA97287.1| |
score: 53.91 |
e-value: 1.9e-15 |
Identity: 44.26% |
Span: 183bp (29.3%) |
Frame: 2 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|15227813|ref|NP_179914.1| |
score: 53.53 |
e-value: 3.2e-15 |
Identity: 44.64% |
Span: 168bp (26.9%) |
Frame: 2 |
| gi|15227813|ref|NP_179914.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|7444418|pir||T00499 prob... |
| Match: gi|37535486|ref|NP_922045.1| |
score: 53.53 |
e-value: 2.6e-15 |
Identity: 48.28% |
Span: 174bp (27.9%) |
Frame: 2 |
| gi|37535486|ref|NP_922045.1| putative copia-like polyprotein [Oryza sativa (japonica cultivar-group)] gi|22094347|gb|... |
| Match: gi|22655202|gb|AAM98191.1| |
score: 53.53 |
e-value: 3.3e-15 |
Identity: 44.64% |
Span: 168bp (26.9%) |
Frame: 2 |
| unknown protein [Arabidopsis thaliana] >gi38603804|gb|AAR24647.1| At2g23330 [Arabidopsis thaliana] >gi|110742535|dbj|... |
| Match: gi|25411120|pir||H84461 |
score: 52.76 |
e-value: 1.2e-14 |
Identity: 44.64% |
Span: 168bp (26.9%) |
Frame: 2 |
| gi|25411120|pir||H84461 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4544415|gb|AAD2232... |
| Match: gi|22325481|ref|NP_178559.2| |
score: 52.76 |
e-value: 1.2e-14 |
Identity: 44.64% |
Span: 168bp (26.9%) |
Frame: 2 |
| gi|22325481|ref|NP_178559.2| retroelement pol polyprotein -related [Arabidopsis thaliana] |
| Match: gi|15236415|ref|NP_194047.1| |
score: 52.37 |
e-value: 2e-14 |
Identity: 42.86% |
Span: 168bp (26.9%) |
Frame: 2 |
| gi|15236415|ref|NP_194047.1| hypothetical protein [Arabidopsis thaliana] gi|7485945|pir||T04833 hypothetical protein ... |
| Match: gi|18378607|gb|AAL68641.1| |
score: 52.37 |
e-value: 1.5e-15 |
Identity: 48.28% |
Span: 174bp (27.9%) |
Frame: 2 |
| gi|18378607|gb|AAL68641.1| polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38345241|emb|CAD41085.2| |
score: 52.37 |
e-value: 1.5e-15 |
Identity: 48.28% |
Span: 174bp (27.9%) |
Frame: 2 |
| gi|38345241|emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|421955|pir||S25787 |
score: 51.99 |
e-value: 3.4e-15 |
Identity: 54.9% |
Span: 153bp (24.5%) |
Frame: 2 |
| gi|421955|pir||S25787 hypothetical protein 4 - potato transposon Tst1 gi|21434|emb|CAA36616.1| unnamed protein produc... |
| Match: gi|15224181|ref|NP_180042.1| |
score: 51.22 |
e-value: 2e-14 |
Identity: 44.83% |
Span: 174bp (27.9%) |
Frame: 2 |
| gi|15224181|ref|NP_180042.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301674|pir||D84639 pro... |
| Match: gi|25301684|pir||F86470 |
score: 51.22 |
e-value: 1.2e-15 |
Identity: 45.61% |
Span: 171bp (27.4%) |
Frame: 2 |
| gi|25301684|pir||F86470 probable retroelement polyprotein [imported] - Arabidopsis thaliana gi|9989049|gb|AAG10812.1|... |
| Match: gi|15222522|ref|NP_177159.1| |
score: 50.45 |
e-value: 1.2e-14 |
Identity: 41.38% |
Span: 174bp (27.9%) |
Frame: 2 |
| gi|15222522|ref|NP_177159.1| hypothetical protein [Arabidopsis thaliana] gi|25301690|pir||G96722 hypothetical protein... |
| Match: gi|15225539|ref|NP_179011.1| |
score: 50.45 |
e-value: 9.1e-15 |
Identity: 39.34% |
Span: 183bp (29.3%) |
Frame: 2 |
| gi|15225539|ref|NP_179011.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301698|pir||C84512 pro... |
| Match: gi|27901696|gb|AAO26684.1| |
score: 45.05 |
e-value: 1.9e-36 |
Identity: 63.33% |
Span: 90bp (14.4%) |
Frame: 1 |
| gi|27901696|gb|AAO26684.1| gag-pol polyprotein [Vitis vinifera] |
| Match: gi|27901709|gb|AAO26690.1| |
score: 45.05 |
e-value: 7.1e-36 |
Identity: 63.33% |
Span: 90bp (14.4%) |
Frame: 1 |
| gi|27901709|gb|AAO26690.1| gag-pol polyprotein [Vitis vinifera] |
| Match: gi|27901694|gb|AAO26683.1| |
score: 45.05 |
e-value: 7.1e-36 |
Identity: 63.33% |
Span: 90bp (14.4%) |
Frame: 1 |
| gi|27901694|gb|AAO26683.1| gag-pol polyprotein [Vitis vinifera] |
| Match: gi|25301684|pir||F86470 |
score: 43.9 |
e-value: 1.2e-15 |
Identity: 58.97% |
Span: 117bp (18.8%) |
Frame: 3 |
| gi|25301684|pir||F86470 probable retroelement polyprotein [imported] - Arabidopsis thaliana gi|9989049|gb|AAG10812.1|... |
| Match: gi|15227813|ref|NP_179914.1| |
score: 41.2 |
e-value: 3.2e-15 |
Identity: 50% |
Span: 132bp (21.2%) |
Frame: 3 |
| gi|15227813|ref|NP_179914.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|7444418|pir||T00499 prob... |
| Match: gi|22655202|gb|AAM98191.1| |
score: 41.2 |
e-value: 3.3e-15 |
Identity: 50% |
Span: 132bp (21.2%) |
Frame: 3 |
| unknown protein [Arabidopsis thaliana] >gi38603804|gb|AAR24647.1| At2g23330 [Arabidopsis thaliana] >gi|110742535|dbj|... |
| Match: gi|421955|pir||S25787 |
score: 40.82 |
e-value: 3.4e-15 |
Identity: 63.64% |
Span: 99bp (15.9%) |
Frame: 3 |
| gi|421955|pir||S25787 hypothetical protein 4 - potato transposon Tst1 gi|21434|emb|CAA36616.1| unnamed protein produc... |
| Match: gi|15225539|ref|NP_179011.1| |
score: 40.05 |
e-value: 9.1e-15 |
Identity: 48.78% |
Span: 123bp (19.7%) |
Frame: 3 |
| gi|15225539|ref|NP_179011.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301698|pir||C84512 pro... |
| Match: gi|38345241|emb|CAD41085.2| |
score: 39.28 |
e-value: 1.5e-15 |
Identity: 60% |
Span: 90bp (14.4%) |
Frame: 3 |
| gi|38345241|emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|8843739|dbj|BAA97287.1| |
score: 39.28 |
e-value: 1.9e-15 |
Identity: 42.55% |
Span: 141bp (22.6%) |
Frame: 3 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|18378607|gb|AAL68641.1| |
score: 39.28 |
e-value: 1.5e-15 |
Identity: 60% |
Span: 90bp (14.4%) |
Frame: 3 |
| gi|18378607|gb|AAL68641.1| polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37535486|ref|NP_922045.1| |
score: 38.89 |
e-value: 2.6e-15 |
Identity: 62.07% |
Span: 87bp (13.9%) |
Frame: 3 |
| gi|37535486|ref|NP_922045.1| putative copia-like polyprotein [Oryza sativa (japonica cultivar-group)] gi|22094347|gb|... |
| Match: gi|32489843|emb|CAE05707.1| |
score: 38.89 |
e-value: 2.5e-16 |
Identity: 62.07% |
Span: 87bp (13.9%) |
Frame: 3 |
| gi|32489843|emb|CAE05707.1| OSJNBb0065J09.3 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34914532|ref|NP_918613.1| |
score: 38.51 |
e-value: 4.2e-15 |
Identity: 51.28% |
Span: 117bp (18.8%) |
Frame: 3 |
| gi|34914532|ref|NP_918613.1| polyprotein [Oryza sativa (japonica cultivar-group)] gi|22093573|dbj|BAC06870.1| polypro... |
| Match: gi|32488892|emb|CAE03643.1| |
score: 38.51 |
e-value: 4.5e-15 |
Identity: 51.28% |
Span: 117bp (18.8%) |
Frame: 3 |
| gi|32488892|emb|CAE03643.1| OSJNBa0060N03.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|30103001|gb|AAP21414.1| |
score: 38.51 |
e-value: 4.2e-15 |
Identity: 51.28% |
Span: 117bp (18.8%) |
Frame: 3 |
| putative polyprotein [Oryza sativa Japonica Group] >gi108711651|gb|ABF99446.1| retrotransposon protein, putative, unc... |
| Match: gi|15222522|ref|NP_177159.1| |
score: 37.74 |
e-value: 1.2e-14 |
Identity: 48.72% |
Span: 117bp (18.8%) |
Frame: 3 |
| gi|15222522|ref|NP_177159.1| hypothetical protein [Arabidopsis thaliana] gi|25301690|pir||G96722 hypothetical protein... |
| Match: gi|15226657|ref|NP_179198.1| |
score: 37.35 |
e-value: 4e-18 |
Identity: 51.72% |
Span: 87bp (13.9%) |
Frame: 1 |
| gi|15226657|ref|NP_179198.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301694|pir||E84535 pro... |
| Match: gi|27573360|gb|AAO20078.1| |
score: 36.96 |
e-value: 1.9e-15 |
Identity: 55.17% |
Span: 87bp (13.9%) |
Frame: 3 |
| gi|27573360|gb|AAO20078.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15218006|ref|NP_176154.1| |
score: 36.58 |
e-value: 2e-14 |
Identity: 53.12% |
Span: 96bp (15.4%) |
Frame: 1 |
| gi|15218006|ref|NP_176154.1| polyprotein -related [Arabidopsis thaliana] gi|14475941|gb|AAK62788.1| polyprotein, puta... |
| Match: gi|15220244|ref|NP_175183.1| |
score: 36.58 |
e-value: 9.2e-16 |
Identity: 48.39% |
Span: 93bp (14.9%) |
Frame: 1 |
| gi|15220244|ref|NP_175183.1| polyprotein -related [Arabidopsis thaliana] |
| Match: gi|4996361|dbj|BAA78423.1| |
score: 36.58 |
e-value: 2e-14 |
Identity: 53.12% |
Span: 96bp (15.4%) |
Frame: 1 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|4996365|dbj|BAA78425.1| |
score: 36.58 |
e-value: 2e-14 |
Identity: 53.12% |
Span: 96bp (15.4%) |
Frame: 1 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|15217982|ref|NP_176146.1| |
score: 36.58 |
e-value: 2e-14 |
Identity: 53.12% |
Span: 96bp (15.4%) |
Frame: 1 |
| gi|15217982|ref|NP_176146.1| polyprotein -related [Arabidopsis thaliana] gi|14475946|gb|AAK62793.1| polyprotein, puta... |
| Match: gi|15226638|ref|NP_179187.1| |
score: 36.19 |
e-value: 1.1e-16 |
Identity: 45.71% |
Span: 105bp (16.8%) |
Frame: 1 |
| gi|15226638|ref|NP_179187.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301676|pir||B84534 pro... |
| Match: gi|25411120|pir||H84461 |
score: 35.81 |
e-value: 1.2e-14 |
Identity: 53.12% |
Span: 96bp (15.4%) |
Frame: 3 |
| gi|25411120|pir||H84461 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4544415|gb|AAD2232... |
| Match: gi|9759590|dbj|BAB11447.1| |
score: 35.81 |
e-value: 9.3e-16 |
Identity: 58.62% |
Span: 87bp (13.9%) |
Frame: 1 |
| gi|9759590|dbj|BAB11447.1| polyprotein-like [Arabidopsis thaliana] |
| Match: gi|22325481|ref|NP_178559.2| |
score: 35.81 |
e-value: 1.2e-14 |
Identity: 53.12% |
Span: 96bp (15.4%) |
Frame: 3 |
| gi|22325481|ref|NP_178559.2| retroelement pol polyprotein -related [Arabidopsis thaliana] |
| Match: gi|15236415|ref|NP_194047.1| |
score: 35.81 |
e-value: 2e-14 |
Identity: 58.62% |
Span: 87bp (13.9%) |
Frame: 1 |
| gi|15236415|ref|NP_194047.1| hypothetical protein [Arabidopsis thaliana] gi|7485945|pir||T04833 hypothetical protein ... |
| Match: gi|15236074|ref|NP_193475.1| |
score: 34.65 |
e-value: 1.5e-16 |
Identity: 55.17% |
Span: 87bp (13.9%) |
Frame: 1 |
| gi|15236074|ref|NP_193475.1| retrotransposon like protein [Arabidopsis thaliana] gi|7444421|pir||A71444 probable LTR ... |
| Match: gi|15235193|ref|NP_193713.1| |
score: 34.65 |
e-value: 9.4e-17 |
Identity: 55.17% |
Span: 87bp (13.9%) |
Frame: 1 |
| gi|15235193|ref|NP_193713.1| LTR retrotransposon -related [Arabidopsis thaliana] |
| Match: gi|7487067|pir||T04759 |
score: 34.65 |
e-value: 1.6e-16 |
Identity: 55.17% |
Span: 87bp (13.9%) |
Frame: 1 |
| gi|7487067|pir||T04759 hypothetical protein T16H5.140 - Arabidopsis thaliana (fragment) gi|25301704|pir||C85224 prob... |
| Match: gi|32489843|emb|CAE05707.1| |
score: 33.5 |
e-value: 2.5e-16 |
Identity: 60.87% |
Span: 69bp (11.1%) |
Frame: 1 |
| gi|32489843|emb|CAE05707.1| OSJNBb0065J09.3 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15235193|ref|NP_193713.1| |
score: 33.11 |
e-value: 9.4e-17 |
Identity: 43.24% |
Span: 111bp (17.8%) |
Frame: 3 |
| gi|15235193|ref|NP_193713.1| LTR retrotransposon -related [Arabidopsis thaliana] |
| Match: gi|15222522|ref|NP_177159.1| |
score: 32.73 |
e-value: 1.2e-14 |
Identity: 55.56% |
Span: 81bp (13.0%) |
Frame: 1 |
| gi|15222522|ref|NP_177159.1| hypothetical protein [Arabidopsis thaliana] gi|25301690|pir||G96722 hypothetical protein... |
| Match: gi|25301682|pir||G86301 |
score: 32.73 |
e-value: 9.1e-15 |
Identity: 53.57% |
Span: 84bp (13.5%) |
Frame: 1 |
| gi|25301682|pir||G86301 probable retroelement polyprotein [imported] - Arabidopsis thaliana gi|9989054|gb|AAG10817.1|... |
| Match: gi|9759590|dbj|BAB11447.1| |
score: 32.34 |
e-value: 9.3e-16 |
Identity: 44.74% |
Span: 114bp (18.3%) |
Frame: 3 |
| gi|9759590|dbj|BAB11447.1| polyprotein-like [Arabidopsis thaliana] |
| Match: gi|7487067|pir||T04759 |
score: 32.34 |
e-value: 1.6e-16 |
Identity: 45.45% |
Span: 99bp (15.9%) |
Frame: 3 |
| gi|7487067|pir||T04759 hypothetical protein T16H5.140 - Arabidopsis thaliana (fragment) gi|25301704|pir||C85224 prob... |
| Match: gi|18378607|gb|AAL68641.1| |
score: 32.34 |
e-value: 1.5e-15 |
Identity: 60.87% |
Span: 69bp (11.1%) |
Frame: 1 |
| gi|18378607|gb|AAL68641.1| polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15236074|ref|NP_193475.1| |
score: 32.34 |
e-value: 1.5e-16 |
Identity: 45.45% |
Span: 99bp (15.9%) |
Frame: 3 |
| gi|15236074|ref|NP_193475.1| retrotransposon like protein [Arabidopsis thaliana] gi|7444421|pir||A71444 probable LTR ... |
| Match: gi|22325481|ref|NP_178559.2| |
score: 32.34 |
e-value: 1.2e-14 |
Identity: 69.57% |
Span: 69bp (11.1%) |
Frame: 1 |
| gi|22325481|ref|NP_178559.2| retroelement pol polyprotein -related [Arabidopsis thaliana] |
| Match: gi|25411120|pir||H84461 |
score: 32.34 |
e-value: 1.2e-14 |
Identity: 69.57% |
Span: 69bp (11.1%) |
Frame: 1 |
| gi|25411120|pir||H84461 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4544415|gb|AAD2232... |
| Match: gi|38345241|emb|CAD41085.2| |
score: 32.34 |
e-value: 1.5e-15 |
Identity: 60.87% |
Span: 69bp (11.1%) |
Frame: 1 |
| gi|38345241|emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15226638|ref|NP_179187.1| |
score: 31.96 |
e-value: 1.1e-16 |
Identity: 46.67% |
Span: 90bp (14.4%) |
Frame: 3 |
| gi|15226638|ref|NP_179187.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301676|pir||B84534 pro... |
| Match: gi|15236415|ref|NP_194047.1| |
score: 31.96 |
e-value: 2e-14 |
Identity: 40.43% |
Span: 141bp (22.6%) |
Frame: 3 |
| gi|15236415|ref|NP_194047.1| hypothetical protein [Arabidopsis thaliana] gi|7485945|pir||T04833 hypothetical protein ... |
| Match: gi|15226657|ref|NP_179198.1| |
score: 31.57 |
e-value: 4e-18 |
Identity: 45.45% |
Span: 99bp (15.9%) |
Frame: 3 |
| gi|15226657|ref|NP_179198.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301694|pir||E84535 pro... |
| Match: gi|27573360|gb|AAO20078.1| |
score: 30.8 |
e-value: 1.9e-15 |
Identity: 56.52% |
Span: 69bp (11.1%) |
Frame: 1 |
| gi|27573360|gb|AAO20078.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15225539|ref|NP_179011.1| |
score: 30.8 |
e-value: 9.1e-15 |
Identity: 41.38% |
Span: 87bp (13.9%) |
Frame: 1 |
| gi|15225539|ref|NP_179011.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301698|pir||C84512 pro... |
| Match: gi|37535486|ref|NP_922045.1| |
score: 30.8 |
e-value: 2.6e-15 |
Identity: 61.9% |
Span: 63bp (10.1%) |
Frame: 1 |
| gi|37535486|ref|NP_922045.1| putative copia-like polyprotein [Oryza sativa (japonica cultivar-group)] gi|22094347|gb|... |
| Match: gi|8843739|dbj|BAA97287.1| |
score: 30.42 |
e-value: 1.9e-15 |
Identity: 41.38% |
Span: 87bp (13.9%) |
Frame: 1 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|421955|pir||S25787 |
score: 30.03 |
e-value: 3.4e-15 |
Identity: 44.44% |
Span: 81bp (13.0%) |
Frame: 1 |
| gi|421955|pir||S25787 hypothetical protein 4 - potato transposon Tst1 gi|21434|emb|CAA36616.1| unnamed protein produc... |
| Match: gi|15220244|ref|NP_175183.1| |
score: 30.03 |
e-value: 9.2e-16 |
Identity: 46.67% |
Span: 90bp (14.4%) |
Frame: 3 |
| gi|15220244|ref|NP_175183.1| polyprotein -related [Arabidopsis thaliana] |
| Match: gi|34914532|ref|NP_918613.1| |
score: 29.26 |
e-value: 4.2e-15 |
Identity: 52.17% |
Span: 69bp (11.1%) |
Frame: 1 |
| gi|34914532|ref|NP_918613.1| polyprotein [Oryza sativa (japonica cultivar-group)] gi|22093573|dbj|BAC06870.1| polypro... |
| Match: gi|32488892|emb|CAE03643.1| |
score: 29.26 |
e-value: 4.5e-15 |
Identity: 52.17% |
Span: 69bp (11.1%) |
Frame: 1 |
| gi|32488892|emb|CAE03643.1| OSJNBa0060N03.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|30103001|gb|AAP21414.1| |
score: 29.26 |
e-value: 4.2e-15 |
Identity: 52.17% |
Span: 69bp (11.1%) |
Frame: 1 |
| putative polyprotein [Oryza sativa Japonica Group] >gi108711651|gb|ABF99446.1| retrotransposon protein, putative, unc... |
| Match: gi|25301684|pir||F86470 |
score: 29.26 |
e-value: 1.2e-15 |
Identity: 56.52% |
Span: 69bp (11.1%) |
Frame: 1 |
| gi|25301684|pir||F86470 probable retroelement polyprotein [imported] - Arabidopsis thaliana gi|9989049|gb|AAG10812.1|... |
| Match: gi|25301682|pir||G86301 |
score: 28.11 |
e-value: 9.1e-15 |
Identity: 40% |
Span: 90bp (14.4%) |
Frame: 3 |
| gi|25301682|pir||G86301 probable retroelement polyprotein [imported] - Arabidopsis thaliana gi|9989054|gb|AAG10817.1|... |
| Match: gi|22655202|gb|AAM98191.1| |
score: 28.11 |
e-value: 3.3e-15 |
Identity: 46.43% |
Span: 78bp (12.5%) |
Frame: 1 |
| unknown protein [Arabidopsis thaliana] >gi38603804|gb|AAR24647.1| At2g23330 [Arabidopsis thaliana] >gi|110742535|dbj|... |
| Match: gi|15227813|ref|NP_179914.1| |
score: 28.11 |
e-value: 3.2e-15 |
Identity: 46.43% |
Span: 78bp (12.5%) |
Frame: 1 |
| gi|15227813|ref|NP_179914.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|7444418|pir||T00499 prob... |
| Match: gi|4996365|dbj|BAA78425.1| |
score: 26.95 |
e-value: 2e-14 |
Identity: 43.75% |
Span: 96bp (15.4%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|15218006|ref|NP_176154.1| |
score: 26.95 |
e-value: 2e-14 |
Identity: 43.75% |
Span: 96bp (15.4%) |
Frame: 3 |
| gi|15218006|ref|NP_176154.1| polyprotein -related [Arabidopsis thaliana] gi|14475941|gb|AAK62788.1| polyprotein, puta... |
| Match: gi|15217982|ref|NP_176146.1| |
score: 26.95 |
e-value: 2e-14 |
Identity: 43.75% |
Span: 96bp (15.4%) |
Frame: 3 |
| gi|15217982|ref|NP_176146.1| polyprotein -related [Arabidopsis thaliana] gi|14475946|gb|AAK62793.1| polyprotein, puta... |
| Match: gi|4996361|dbj|BAA78423.1| |
score: 26.95 |
e-value: 2e-14 |
Identity: 43.75% |
Span: 96bp (15.4%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
|
| 354 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 100 hits recorded |
| Match: At2g16000.1 |
score: 63.93 |
e-value: 1.5e-19 |
Identity: 50.85% |
Span: 177bp (28.4%) |
Frame: 2 |
| At2g16000.1 68409.m01646 retroelement pol polyprotein -related |
| Match: At4g19780.1 |
score: 60.46 |
e-value: 3.5e-18 |
Identity: 50.85% |
Span: 177bp (28.4%) |
Frame: 2 |
| At4g19780.1 68411.m02649 LTR retrotransposon -related Brassica oleracea SLG-Sc and SLA-Sc genes and Melmoth retrotra... |
| Match: At4g17450.1 |
score: 60.46 |
e-value: 5.5e-18 |
Identity: 50.85% |
Span: 177bp (28.4%) |
Frame: 2 |
| At4g17450.1 68411.m02377 retrotransposon like protein |
| Match: At2g15870.1 |
score: 59.69 |
e-value: 4.2e-18 |
Identity: 45.9% |
Span: 183bp (29.3%) |
Frame: 2 |
| At2g15870.1 68409.m01633 retroelement pol polyprotein -related contains signature integrase DDE motif |
| Match: At1g47520.1 |
score: 58.15 |
e-value: 3.4e-17 |
Identity: 44.26% |
Span: 183bp (29.3%) |
Frame: 2 |
| At1g47520.1 68408.m04834 polyprotein -related similar to polyprotein GI:2865437 from [Arabidopsis arenosa] |
| Match: At2g20460.1 |
score: 57.77 |
e-value: 2.6e-15 |
Identity: 47.54% |
Span: 183bp (29.3%) |
Frame: 2 |
| At2g20460.1 68409.m02171 retroelement pol polyprotein -related |
| Match: At1g59265.1 |
score: 56.61 |
e-value: 7.3e-16 |
Identity: 51.79% |
Span: 168bp (26.9%) |
Frame: 2 |
| At1g59265.1 68408.m06119 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At1g58889.1 |
score: 56.61 |
e-value: 7.3e-16 |
Identity: 51.79% |
Span: 168bp (26.9%) |
Frame: 2 |
| At1g58889.1 68408.m06107 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At1g34545.1 |
score: 54.68 |
e-value: 4.8e-11 |
Identity: 40.54% |
Span: 222bp (35.6%) |
Frame: 2 |
| At1g34545.1 68408.m03897 pol polyprotein -related similar to many predicted pol polyproteins |
| Match: At1g44510.1 |
score: 53.91 |
e-value: 3.4e-12 |
Identity: 42.11% |
Span: 228bp (36.5%) |
Frame: 2 |
| At1g44510.1 68408.m04686 polyprotein -related similar to polyprotein GI:4996367 from [Arabidopsis thaliana] |
| Match: At4g07810.1 |
score: 53.91 |
e-value: 1.6e-14 |
Identity: 40.79% |
Span: 228bp (36.5%) |
Frame: 2 |
| At4g07810.1 68411.m01111 polyprotein -related |
| Match: At2g23330.1 |
score: 53.53 |
e-value: 1.2e-16 |
Identity: 44.64% |
Span: 168bp (26.9%) |
Frame: 2 |
| At2g23330.1 68409.m02521 retroelement pol polyprotein -related |
| Match: At3g61330.1 |
score: 53.14 |
e-value: 1.3e-09 |
Identity: 45.76% |
Span: 177bp (28.4%) |
Frame: 2 |
| At3g61330.1 68410.m06339 copia-type polyprotein copia polyprotein - Drosophila melanogaster, PIR:OFFFCP |
| Match: At3g43955.1 |
score: 53.14 |
e-value: 9.5e-15 |
Identity: 45.76% |
Span: 171bp (27.4%) |
Frame: 2 |
| At3g43955.1 68410.m04359 retroelement pol polyprotein -related temporary automated functional assignment |
| Match: At1g11265.1 |
score: 53.14 |
e-value: 2.3e-09 |
Identity: 45.76% |
Span: 177bp (28.4%) |
Frame: 2 |
| At1g11265.1 68408.m01163 copia-type polyprotein identical to copia-type polyprotein GB:CAB71063 GI:6850900 from [Arab... |
| Match: At1g58140.1 |
score: 53.14 |
e-value: 2.3e-09 |
Identity: 45.76% |
Span: 177bp (28.4%) |
Frame: 2 |
| At1g58140.1 68408.m06045 copia-type polyprotein -related similar to copia-type polyprotein GI:6850900 from (Arabidops... |
| Match: At5g13205.1 |
score: 53.14 |
e-value: 2.3e-09 |
Identity: 45.76% |
Span: 177bp (28.4%) |
Frame: 2 |
| At5g13205.1 68412.m01398 copia-type polyprotein -related temporary automated functional assignment |
| Match: At1g48710.1 |
score: 53.14 |
e-value: 2.3e-09 |
Identity: 45.76% |
Span: 177bp (28.4%) |
Frame: 2 |
| At1g48710.1 68408.m04991 copia-type polyprotein -related similar to copia-type polyprotein GI:6850900 from [Arabidops... |
| Match: At2g04820.1 |
score: 52.76 |
e-value: 4.6e-16 |
Identity: 44.64% |
Span: 168bp (26.9%) |
Frame: 2 |
| At2g04820.1 68409.m00443 retroelement pol polyprotein -related |
| Match: At4g10990.1 |
score: 52.37 |
e-value: 9.6e-15 |
Identity: 42.62% |
Span: 183bp (29.3%) |
Frame: 2 |
| At4g10990.1 68411.m01615 retrotransposon polyprotein -related various predicted LTR retrotransposons, Arabidopsisthal... |
| Match: At4g23160.1 |
score: 52.37 |
e-value: 7.3e-16 |
Identity: 42.86% |
Span: 168bp (26.9%) |
Frame: 2 |
| At4g23160.1 68411.m03051 hypothetical protein copia-like retrotransposon Hopscotch polyprotein, Zea mays |
| Match: At2g24660.1 |
score: 51.22 |
e-value: 7.3e-16 |
Identity: 44.83% |
Span: 174bp (27.9%) |
Frame: 2 |
| At2g24660.1 68409.m02666 retroelement pol polyprotein -related |
| Match: At4g02960.1 |
score: 50.83 |
e-value: 1e-10 |
Identity: 39.47% |
Span: 228bp (36.5%) |
Frame: 2 |
| At4g02960.1 68411.m00365 polyprotein of LTR transposon -related similar to A. thaliana polyprotein, GenBank accession... |
| Match: At1g70010.1 |
score: 50.45 |
e-value: 4.4e-16 |
Identity: 41.38% |
Span: 174bp (27.9%) |
Frame: 2 |
| At1g70010.1 68408.m07390 hypothetical protein similar to putative retroelement pol polyprotein GI:4678197 from [Arabi... |
| Match: At2g13940.1 |
score: 50.45 |
e-value: 3.4e-16 |
Identity: 39.34% |
Span: 183bp (29.3%) |
Frame: 2 |
| At2g13940.1 68409.m01403 retroelement pol polyprotein -related contains a Zn-finger CCHC type domain (prosite:QDOC501... |
| Match: At1g56675.1 |
score: 50.06 |
e-value: 7.3e-15 |
Identity: 42.86% |
Span: 168bp (26.9%) |
Frame: 2 |
| At1g56675.1 68408.m05976 hypothetical protein similar to putative retroelement pol polyprotein GI:6850344 from [Arabi... |
| Match: At4g16870.1 |
score: 50.06 |
e-value: 3.4e-11 |
Identity: 44.64% |
Span: 168bp (26.9%) |
Frame: 2 |
| At4g16870.1 68411.m02317 retrotransposon like protein |
| Match: At4g10690.1 |
score: 50.06 |
e-value: 3.8e-09 |
Identity: 39.19% |
Span: 222bp (35.6%) |
Frame: 2 |
| At4g10690.1 68411.m01580 retrotransposon like protein copia-like retrotransposon Hopscotch polyprotein - Zea mays,PID... |
| Match: At3g60170.1 |
score: 49.68 |
e-value: 3.7e-10 |
Identity: 42.62% |
Span: 183bp (29.3%) |
Frame: 2 |
| At3g60170.1 68410.m06211 hypothetical protein several retrotransposon polyproteins |
| Match: At1g32590.1 |
score: 49.29 |
e-value: 1.7e-10 |
Identity: 42.86% |
Span: 168bp (26.9%) |
Frame: 2 |
| At1g32590.1 68408.m03642 copia-type polyprotein -related similar to GI:6850900 from [Arabidopsis thaliana] |
| Match: At2g16670.1 |
score: 48.91 |
e-value: 9.4e-16 |
Identity: 47.06% |
Span: 153bp (24.5%) |
Frame: 2 |
| At2g16670.1 68409.m01723 retroelement pol polyprotein -related |
| Match: At1g27285.1 |
score: 48.91 |
e-value: 7.1e-10 |
Identity: 44.64% |
Span: 168bp (26.9%) |
Frame: 2 |
| At1g27285.1 68408.m03015 polyprotein -related similar to GB:AAC02666 |
| Match: At2g07420.1 |
score: 46.59 |
e-value: 7.2e-11 |
Identity: 61.54% |
Span: 117bp (18.8%) |
Frame: 3 |
| At2g07420.1 68409.m00757 retroelement pol polyprotein -related contains weak zinc-finger domains |
| Match: At2g06950.1 |
score: 46.59 |
e-value: 1.7e-09 |
Identity: 33.33% |
Span: 261bp (41.8%) |
Frame: 2 |
| At2g06950.1 68409.m00709 retroelement pol polyprotein -related |
| Match: At1g57640.1 |
score: 46.21 |
e-value: 7.3e-15 |
Identity: 43.14% |
Span: 153bp (24.5%) |
Frame: 2 |
| At1g57640.1 68408.m05995 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At4g22040.1 |
score: 45.44 |
e-value: 1.2e-14 |
Identity: 43.14% |
Span: 153bp (24.5%) |
Frame: 2 |
| At4g22040.1 68411.m02915 LTR retrotransposon like protein retrovirus-related polyprotein, fruit fly, transposon copia |
| Match: At1g57640.1 |
score: 44.28 |
e-value: 7.3e-15 |
Identity: 51.16% |
Span: 129bp (20.7%) |
Frame: 3 |
| At1g57640.1 68408.m05995 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At4g22040.1 |
score: 44.28 |
e-value: 1.2e-14 |
Identity: 51.16% |
Span: 129bp (20.7%) |
Frame: 3 |
| At4g22040.1 68411.m02915 LTR retrotransposon like protein retrovirus-related polyprotein, fruit fly, transposon copia |
| Match: At4g11375.1 |
score: 43.51 |
e-value: 1.2e-13 |
Identity: 40.82% |
Span: 147bp (23.6%) |
Frame: 2 |
| At4g11375.1 68411.m01659 polyprotein -related temporary automated functional assignment |
| Match: At2g16670.1 |
score: 41.59 |
e-value: 9.4e-16 |
Identity: 47.73% |
Span: 132bp (21.2%) |
Frame: 3 |
| At2g16670.1 68409.m01723 retroelement pol polyprotein -related |
| Match: At2g23330.1 |
score: 41.2 |
e-value: 1.2e-16 |
Identity: 50% |
Span: 132bp (21.2%) |
Frame: 3 |
| At2g23330.1 68409.m02521 retroelement pol polyprotein -related |
| Match: At4g11375.1 |
score: 40.43 |
e-value: 1.2e-13 |
Identity: 48.84% |
Span: 129bp (20.7%) |
Frame: 3 |
| At4g11375.1 68411.m01659 polyprotein -related temporary automated functional assignment |
| Match: At2g24660.1 |
score: 40.05 |
e-value: 7.3e-16 |
Identity: 48.78% |
Span: 123bp (19.7%) |
Frame: 3 |
| At2g24660.1 68409.m02666 retroelement pol polyprotein -related |
| Match: At2g13940.1 |
score: 40.05 |
e-value: 3.4e-16 |
Identity: 48.78% |
Span: 123bp (19.7%) |
Frame: 3 |
| At2g13940.1 68409.m01403 retroelement pol polyprotein -related contains a Zn-finger CCHC type domain (prosite:QDOC501... |
| Match: At1g70010.1 |
score: 37.74 |
e-value: 4.4e-16 |
Identity: 48.72% |
Span: 117bp (18.8%) |
Frame: 3 |
| At1g70010.1 68408.m07390 hypothetical protein similar to putative retroelement pol polyprotein GI:4678197 from [Arabi... |
| Match: At2g16000.1 |
score: 37.35 |
e-value: 1.5e-19 |
Identity: 51.72% |
Span: 87bp (13.9%) |
Frame: 1 |
| At2g16000.1 68409.m01646 retroelement pol polyprotein -related |
| Match: At1g58889.1 |
score: 36.58 |
e-value: 7.3e-16 |
Identity: 53.12% |
Span: 96bp (15.4%) |
Frame: 1 |
| At1g58889.1 68408.m06107 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At1g47520.1 |
score: 36.58 |
e-value: 3.4e-17 |
Identity: 48.39% |
Span: 93bp (14.9%) |
Frame: 1 |
| At1g47520.1 68408.m04834 polyprotein -related similar to polyprotein GI:2865437 from [Arabidopsis arenosa] |
| Match: At1g59265.1 |
score: 36.58 |
e-value: 7.3e-16 |
Identity: 53.12% |
Span: 96bp (15.4%) |
Frame: 1 |
| At1g59265.1 68408.m06119 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At1g56675.1 |
score: 36.58 |
e-value: 7.3e-15 |
Identity: 46.15% |
Span: 117bp (18.8%) |
Frame: 3 |
| At1g56675.1 68408.m05976 hypothetical protein similar to putative retroelement pol polyprotein GI:6850344 from [Arabi... |
| Match: At2g15870.1 |
score: 36.19 |
e-value: 4.2e-18 |
Identity: 45.71% |
Span: 105bp (16.8%) |
Frame: 1 |
| At2g15870.1 68409.m01633 retroelement pol polyprotein -related contains signature integrase DDE motif |
| Match: At4g23160.1 |
score: 35.81 |
e-value: 7.3e-16 |
Identity: 58.62% |
Span: 87bp (13.9%) |
Frame: 1 |
| At4g23160.1 68411.m03051 hypothetical protein copia-like retrotransposon Hopscotch polyprotein, Zea mays |
| Match: At2g04820.1 |
score: 35.81 |
e-value: 4.6e-16 |
Identity: 53.12% |
Span: 96bp (15.4%) |
Frame: 3 |
| At2g04820.1 68409.m00443 retroelement pol polyprotein -related |
| Match: At4g07810.1 |
score: 35.42 |
e-value: 1.6e-14 |
Identity: 53.33% |
Span: 90bp (14.4%) |
Frame: 3 |
| At4g07810.1 68411.m01111 polyprotein -related |
| Match: At4g17450.1 |
score: 34.65 |
e-value: 5.5e-18 |
Identity: 55.17% |
Span: 87bp (13.9%) |
Frame: 1 |
| At4g17450.1 68411.m02377 retrotransposon like protein |
| Match: At4g19780.1 |
score: 34.65 |
e-value: 3.5e-18 |
Identity: 55.17% |
Span: 87bp (13.9%) |
Frame: 1 |
| At4g19780.1 68411.m02649 LTR retrotransposon -related Brassica oleracea SLG-Sc and SLA-Sc genes and Melmoth retrotra... |
| Match: At3g43955.1 |
score: 33.88 |
e-value: 9.5e-15 |
Identity: 42.42% |
Span: 99bp (15.9%) |
Frame: 1 |
| At3g43955.1 68410.m04359 retroelement pol polyprotein -related temporary automated functional assignment |
| Match: At1g32590.1 |
score: 33.11 |
e-value: 1.7e-10 |
Identity: 36.36% |
Span: 129bp (20.7%) |
Frame: 3 |
| At1g32590.1 68408.m03642 copia-type polyprotein -related similar to GI:6850900 from [Arabidopsis thaliana] |
| Match: At4g19780.1 |
score: 33.11 |
e-value: 3.5e-18 |
Identity: 43.24% |
Span: 111bp (17.8%) |
Frame: 3 |
| At4g19780.1 68411.m02649 LTR retrotransposon -related Brassica oleracea SLG-Sc and SLA-Sc genes and Melmoth retrotra... |
| Match: At1g70010.1 |
score: 32.73 |
e-value: 4.4e-16 |
Identity: 55.56% |
Span: 81bp (13.0%) |
Frame: 1 |
| At1g70010.1 68408.m07390 hypothetical protein similar to putative retroelement pol polyprotein GI:4678197 from [Arabi... |
| Match: At2g07420.1 |
score: 32.73 |
e-value: 7.2e-11 |
Identity: 57.69% |
Span: 78bp (12.5%) |
Frame: 1 |
| At2g07420.1 68409.m00757 retroelement pol polyprotein -related contains weak zinc-finger domains |
| Match: At4g10990.1 |
score: 32.34 |
e-value: 9.6e-15 |
Identity: 41.03% |
Span: 117bp (18.8%) |
Frame: 3 |
| At4g10990.1 68411.m01615 retrotransposon polyprotein -related various predicted LTR retrotransposons, Arabidopsisthal... |
| Match: At4g17450.1 |
score: 32.34 |
e-value: 5.5e-18 |
Identity: 45.45% |
Span: 99bp (15.9%) |
Frame: 3 |
| At4g17450.1 68411.m02377 retrotransposon like protein |
| Match: At2g04820.1 |
score: 32.34 |
e-value: 4.6e-16 |
Identity: 69.57% |
Span: 69bp (11.1%) |
Frame: 1 |
| At2g04820.1 68409.m00443 retroelement pol polyprotein -related |
| Match: At4g02960.1 |
score: 32.34 |
e-value: 1e-10 |
Identity: 65.22% |
Span: 69bp (11.1%) |
Frame: 1 |
| At4g02960.1 68411.m00365 polyprotein of LTR transposon -related similar to A. thaliana polyprotein, GenBank accession... |
| Match: At2g06950.1 |
score: 32.34 |
e-value: 1.7e-09 |
Identity: 37.14% |
Span: 105bp (16.8%) |
Frame: 3 |
| At2g06950.1 68409.m00709 retroelement pol polyprotein -related |
| Match: At2g20460.1 |
score: 31.96 |
e-value: 2.6e-15 |
Identity: 50% |
Span: 90bp (14.4%) |
Frame: 3 |
| At2g20460.1 68409.m02171 retroelement pol polyprotein -related |
| Match: At4g23160.1 |
score: 31.96 |
e-value: 7.3e-16 |
Identity: 40.43% |
Span: 141bp (22.6%) |
Frame: 3 |
| At4g23160.1 68411.m03051 hypothetical protein copia-like retrotransposon Hopscotch polyprotein, Zea mays |
| Match: At2g15870.1 |
score: 31.96 |
e-value: 4.2e-18 |
Identity: 46.67% |
Span: 90bp (14.4%) |
Frame: 3 |
| At2g15870.1 68409.m01633 retroelement pol polyprotein -related contains signature integrase DDE motif |
| Match: At3g60170.1 |
score: 31.57 |
e-value: 3.7e-10 |
Identity: 46.67% |
Span: 90bp (14.4%) |
Frame: 3 |
| At3g60170.1 68410.m06211 hypothetical protein several retrotransposon polyproteins |
| Match: At4g10990.1 |
score: 31.57 |
e-value: 9.6e-15 |
Identity: 45.16% |
Span: 93bp (14.9%) |
Frame: 1 |
| At4g10990.1 68411.m01615 retrotransposon polyprotein -related various predicted LTR retrotransposons, Arabidopsisthal... |
| Match: At2g16000.1 |
score: 31.57 |
e-value: 1.5e-19 |
Identity: 45.45% |
Span: 99bp (15.9%) |
Frame: 3 |
| At2g16000.1 68409.m01646 retroelement pol polyprotein -related |
| Match: At2g13940.1 |
score: 30.8 |
e-value: 3.4e-16 |
Identity: 41.38% |
Span: 87bp (13.9%) |
Frame: 1 |
| At2g13940.1 68409.m01403 retroelement pol polyprotein -related contains a Zn-finger CCHC type domain (prosite:QDOC501... |
| Match: At1g47520.1 |
score: 30.03 |
e-value: 3.4e-17 |
Identity: 46.67% |
Span: 90bp (14.4%) |
Frame: 3 |
| At1g47520.1 68408.m04834 polyprotein -related similar to polyprotein GI:2865437 from [Arabidopsis arenosa] |
| Match: At1g56675.1 |
score: 30.03 |
e-value: 7.3e-15 |
Identity: 48% |
Span: 75bp (12.0%) |
Frame: 1 |
| At1g56675.1 68408.m05976 hypothetical protein similar to putative retroelement pol polyprotein GI:6850344 from [Arabi... |
| Match: At1g34545.1 |
score: 29.65 |
e-value: 4.8e-11 |
Identity: 46.67% |
Span: 90bp (14.4%) |
Frame: 3 |
| At1g34545.1 68408.m03897 pol polyprotein -related similar to many predicted pol polyproteins |
| Match: At2g16670.1 |
score: 29.26 |
e-value: 9.4e-16 |
Identity: 44% |
Span: 75bp (12.0%) |
Frame: 1 |
| At2g16670.1 68409.m01723 retroelement pol polyprotein -related |
| Match: At3g43955.1 |
score: 29.26 |
e-value: 9.5e-15 |
Identity: 43.33% |
Span: 90bp (14.4%) |
Frame: 3 |
| At3g43955.1 68410.m04359 retroelement pol polyprotein -related temporary automated functional assignment |
| Match: At4g16870.1 |
score: 29.26 |
e-value: 3.4e-11 |
Identity: 46.88% |
Span: 96bp (15.4%) |
Frame: 3 |
| At4g16870.1 68411.m02317 retrotransposon like protein |
| Match: At2g24660.1 |
score: 28.88 |
e-value: 7.3e-16 |
Identity: 37.93% |
Span: 87bp (13.9%) |
Frame: 1 |
| At2g24660.1 68409.m02666 retroelement pol polyprotein -related |
| Match: At2g20460.1 |
score: 28.49 |
e-value: 2.6e-15 |
Identity: 41.38% |
Span: 87bp (13.9%) |
Frame: 1 |
| At2g20460.1 68409.m02171 retroelement pol polyprotein -related |
| Match: At4g11375.1 |
score: 28.49 |
e-value: 1.2e-13 |
Identity: 47.83% |
Span: 69bp (11.1%) |
Frame: 1 |
| At4g11375.1 68411.m01659 polyprotein -related temporary automated functional assignment |
| Match: At2g23330.1 |
score: 28.11 |
e-value: 1.2e-16 |
Identity: 46.43% |
Span: 78bp (12.5%) |
Frame: 1 |
| At2g23330.1 68409.m02521 retroelement pol polyprotein -related |
| Match: At4g10690.1 |
score: 27.72 |
e-value: 3.8e-09 |
Identity: 35.29% |
Span: 102bp (16.3%) |
Frame: 3 |
| At4g10690.1 68411.m01580 retrotransposon like protein copia-like retrotransposon Hopscotch polyprotein - Zea mays,PID... |
| Match: At1g44510.1 |
score: 26.95 |
e-value: 3.4e-12 |
Identity: 52.17% |
Span: 69bp (11.1%) |
Frame: 1 |
| At1g44510.1 68408.m04686 polyprotein -related similar to polyprotein GI:4996367 from [Arabidopsis thaliana] |
| Match: At1g58889.1 |
score: 26.95 |
e-value: 7.3e-16 |
Identity: 43.75% |
Span: 96bp (15.4%) |
Frame: 3 |
| At1g58889.1 68408.m06107 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At1g59265.1 |
score: 26.95 |
e-value: 7.3e-16 |
Identity: 43.75% |
Span: 96bp (15.4%) |
Frame: 3 |
| At1g59265.1 68408.m06119 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At1g44510.1 |
score: 26.56 |
e-value: 3.4e-12 |
Identity: 43.75% |
Span: 96bp (15.4%) |
Frame: 3 |
| At1g44510.1 68408.m04686 polyprotein -related similar to polyprotein GI:4996367 from [Arabidopsis thaliana] |
| Match: At4g07810.1 |
score: 26.18 |
e-value: 1.6e-14 |
Identity: 52.17% |
Span: 69bp (11.1%) |
Frame: 1 |
| At4g07810.1 68411.m01111 polyprotein -related |
| Match: At3g61330.1 |
score: 26.18 |
e-value: 1.3e-09 |
Identity: 27.03% |
Span: 111bp (17.8%) |
Frame: 3 |
| At3g61330.1 68410.m06339 copia-type polyprotein copia polyprotein - Drosophila melanogaster, PIR:OFFFCP |
| Match: At1g27285.1 |
score: 26.18 |
e-value: 7.1e-10 |
Identity: 54.55% |
Span: 66bp (10.6%) |
Frame: 1 |
| At1g27285.1 68408.m03015 polyprotein -related similar to GB:AAC02666 |
| Match: At4g22040.1 |
score: 26.18 |
e-value: 1.2e-14 |
Identity: 39.13% |
Span: 69bp (11.1%) |
Frame: 1 |
| At4g22040.1 68411.m02915 LTR retrotransposon like protein retrovirus-related polyprotein, fruit fly, transposon copia |
| Match: At1g57640.1 |
score: 26.18 |
e-value: 7.3e-15 |
Identity: 39.13% |
Span: 69bp (11.1%) |
Frame: 1 |
| At1g57640.1 68408.m05995 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At5g13205.1 |
score: 25.41 |
e-value: 2.3e-09 |
Identity: 27.03% |
Span: 111bp (17.8%) |
Frame: 3 |
| At5g13205.1 68412.m01398 copia-type polyprotein -related temporary automated functional assignment |
| Match: At1g58140.1 |
score: 25.41 |
e-value: 2.3e-09 |
Identity: 27.03% |
Span: 111bp (17.8%) |
Frame: 3 |
| At1g58140.1 68408.m06045 copia-type polyprotein -related similar to copia-type polyprotein GI:6850900 from (Arabidops... |
| Match: At1g11265.1 |
score: 25.41 |
e-value: 2.3e-09 |
Identity: 27.03% |
Span: 111bp (17.8%) |
Frame: 3 |
| At1g11265.1 68408.m01163 copia-type polyprotein identical to copia-type polyprotein GB:CAB71063 GI:6850900 from [Arab... |
| Match: At1g48710.1 |
score: 25.41 |
e-value: 2.3e-09 |
Identity: 27.03% |
Span: 111bp (17.8%) |
Frame: 3 |
| At1g48710.1 68408.m04991 copia-type polyprotein -related similar to copia-type polyprotein GI:6850900 from [Arabidops... |
| Match: At4g16870.1 |
score: 24.64 |
e-value: 3.4e-11 |
Identity: 52.17% |
Span: 69bp (11.1%) |
Frame: 1 |
| At4g16870.1 68411.m02317 retrotransposon like protein |
| Match: At1g27285.1 |
score: 24.25 |
e-value: 7.1e-10 |
Identity: 40.74% |
Span: 81bp (13.0%) |
Frame: 3 |
| At1g27285.1 68408.m03015 polyprotein -related similar to GB:AAC02666 |
| Match: At2g07420.1 |
score: 23.48 |
e-value: 7.2e-11 |
Identity: 29.41% |
Span: 144bp (23.1%) |
Frame: 2 |
| At2g07420.1 68409.m00757 retroelement pol polyprotein -related contains weak zinc-finger domains |
|
| 54 lower scoring hits censored -- only 100 best hits are stored. |
