| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|270244289|emb|CBI31225.1| |
score: 215 |
e-value: 2e-54 |
Identity: 60.3% |
Span: 585bp (93.2%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225439207|ref|XP_002270169.1| |
score: 215 |
e-value: 2e-54 |
Identity: 60.3% |
Span: 585bp (93.2%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|7413616|emb|CAB85703.1| |
score: 211 |
e-value: 6e-53 |
Identity: 58.88% |
Span: 585bp (93.2%) |
Frame: 2 |
| putative polynucleotide phosphorylase [Arabidopsis thaliana] |
| Match: gi|30678905|ref|NP_187021.2| |
score: 211 |
e-value: 6e-53 |
Identity: 58.88% |
Span: 585bp (93.2%) |
Frame: 2 |
| RIF10 (resistant to inhibition with FSM 10); 3'-5'-exoribonuclease/ RNA binding / nucleic acid binding / polyribonucl... |
| Match: gi|115470767|ref|NP_001058982.1| |
score: 202 |
e-value: 2e-50 |
Identity: 71.64% |
Span: 402bp (64.0%) |
Frame: 2 |
| Os07g0168000 [Oryza sativa (japonica cultivar-group)] >gi50509724|dbj|BAD31776.1| putative polynucleotide phosphoryla... |
| Match: gi|2286200|gb|AAC50039.1| |
score: 201 |
e-value: 4e-50 |
Identity: 72.46% |
Span: 411bp (65.4%) |
Frame: 2 |
| polynucleotide phosphorylase [Pisum sativum] |
| Match: gi|6006870|gb|AAF00646.1|AC009540_23 |
score: 200 |
e-value: 8e-50 |
Identity: 72.26% |
Span: 411bp (65.4%) |
Frame: 2 |
| putative polynucleotide phosphorylase [Arabidopsis thaliana] >gi6091752|gb|AAF03462.1|AC009327_1 putative polynucleot... |
| Match: gi|224146058|ref|XP_002325864.1| |
score: 199 |
e-value: 1e-49 |
Identity: 84.68% |
Span: 333bp (53.0%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222862739|gb|EEF00246.1| predicted protein [Populus trichocarpa] |
| Match: gi|224125980|ref|XP_002319726.1| |
score: 199 |
e-value: 2e-49 |
Identity: 81.9% |
Span: 348bp (55.4%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222858102|gb|EEE95649.1| predicted protein [Populus trichocarpa] |
| Match: gi|255569434|ref|XP_002525684.1| |
score: 198 |
e-value: 4e-49 |
Identity: 61.45% |
Span: 537bp (85.5%) |
Frame: 2 |
| polyribonucleotide nucleotidyltransferase, putative [Ricinus communis] >gi223534984|gb|EEF36667.1| polyribonucleotide... |
| Match: gi|242047540|ref|XP_002461516.1| |
score: 197 |
e-value: 8e-49 |
Identity: 82.88% |
Span: 333bp (53.0%) |
Frame: 2 |
| hypothetical protein SORBIDRAFT_02g003900 [Sorghum bicolor] >gi241924893|gb|EER98037.1| hypothetical protein SORBIDRA... |
| Match: gi|1924972|gb|AAC49669.1| |
score: 193 |
e-value: 9e-48 |
Identity: 81.25% |
Span: 336bp (53.5%) |
Frame: 2 |
| polyribonucleotide phophorylase [Spinacia oleracea] |
| Match: gi|1588265|prf||2208281A |
score: 193 |
e-value: 9e-48 |
Identity: 81.25% |
Span: 336bp (53.5%) |
Frame: 2 |
| 100RNP protein |
| Match: gi|2275200|gb|AAB63822.1| |
score: 149 |
e-value: 2e-34 |
Identity: 72.73% |
Span: 297bp (47.3%) |
Frame: 2 |
| putative polyribonucleotide phosphorylase [Arabidopsis thaliana] |
| Match: gi|42570002|ref|NP_182244.2| |
score: 149 |
e-value: 2e-34 |
Identity: 72.73% |
Span: 297bp (47.3%) |
Frame: 2 |
| 3' exoribonuclease family domain 1 protein-related [Arabidopsis thaliana] |
| Match: gi|255073611|ref|XP_002500480.1| |
score: 129 |
e-value: 2e-28 |
Identity: 49.19% |
Span: 354bp (56.4%) |
Frame: 2 |
| predicted protein [Micromonas sp. RCC299] >gi226515743|gb|ACO61738.1| predicted protein [Micromonas sp. RCC299] |
| Match: gi|116626786|ref|YP_828942.1| |
score: 126 |
e-value: 2e-27 |
Identity: 54.72% |
Span: 318bp (50.6%) |
Frame: 2 |
| polynucleotide phosphorylase/polyadenylase [Solibacter usitatus Ellin6076] >gi122251352|sp|Q01NW3.1|PNP_SOLUE RecName... |
| Match: gi|187610325|sp|Q6MDI2.2|PNP_PARUW |
score: 124 |
e-value: 5e-27 |
Identity: 54.21% |
Span: 321bp (51.1%) |
Frame: 2 |
| RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase |
| Match: gi|46446277|ref|YP_007642.1| |
score: 124 |
e-value: 5e-27 |
Identity: 54.21% |
Span: 321bp (51.1%) |
Frame: 2 |
| polynucleotide phosphorylase/polyadenylase [Candidatus Protochlamydia amoebophila UWE25] >gi46399918|emb|CAF23367.1| ... |
| Match: gi|261856059|ref|YP_003263342.1| |
score: 120 |
e-value: 1e-25 |
Identity: 53.7% |
Span: 324bp (51.6%) |
Frame: 2 |
| polyribonucleotide nucleotidyltransferase [Halothiobacillus neapolitanus c2] >gi261836528|gb|ACX96295.1| polyribonucl... |
| Match: gi|226461996|gb|EEH59288.1| |
score: 120 |
e-value: 1e-25 |
Identity: 48.44% |
Span: 363bp (57.8%) |
Frame: 2 |
| predicted protein [Micromonas pusilla CCMP1545] |
| Match: gi|282889646|ref|ZP_06298186.1| |
score: 119 |
e-value: 2e-25 |
Identity: 55.56% |
Span: 321bp (51.1%) |
Frame: 2 |
| hypothetical protein pah_c003o034 [Parachlamydia acanthamoebae str. Hall's coccus] >gi281500473|gb|EFB42752.1| hypoth... |
| Match: gi|219119866|ref|XP_002180684.1| |
score: 119 |
e-value: 2e-25 |
Identity: 58.76% |
Span: 291bp (46.3%) |
Frame: 2 |
| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi217408157|gb|EEC48092.1| predicted protein [Phaeodactylu... |
| Match: gi|171912768|ref|ZP_02928238.1| |
score: 119 |
e-value: 2e-25 |
Identity: 54.81% |
Span: 312bp (49.7%) |
Frame: 2 |
| polynucleotide phosphorylase/polyadenylase [Verrucomicrobium spinosum DSM 4136] |
| Match: gi|149185848|ref|ZP_01864163.1| |
score: 119 |
e-value: 2e-25 |
Identity: 57.14% |
Span: 315bp (50.2%) |
Frame: 2 |
| polynucleotide phosphorylase/polyadenylase [Erythrobacter sp. SD-21] >gi148830409|gb|EDL48845.1| polynucleotide phosp... |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 3 hits recorded |
| Match: At3G03710.1 |
score: 211 |
e-value: 4e-55 |
Identity: 58.88% |
Span: 585bp (93.2%) |
Frame: 2 |
| Symbols: RIF10 | RIF10 (RESISTANT TO INHIBITION WITH FSM 10); 3'-5'-exoribonuclease/ RNA binding / nucleic acid bind... |
| Match: At2G47220.1 |
score: 149 |
e-value: 1e-36 |
Identity: 72.73% |
Span: 297bp (47.3%) |
Frame: 2 |
| 3' exoribonuclease family domain 1 protein-related | chr2:19391129-19393542 FORWARD |
| Match: At5G14580.1 |
score: 91.7 |
e-value: 3e-19 |
Identity: 45% |
Span: 360bp (57.3%) |
Frame: 2 |
| polyribonucleotide nucleotidyltransferase, putative | chr5:4697615-4703016 REVERSE |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: Q01NW3 |
score: 126 |
e-value: 1e-28 |
Identity: 54.72% |
Span: 318bp (50.6%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=pnp PE=3 SV=1 |
| Match: Q6MDI2 |
score: 124 |
e-value: 4e-28 |
Identity: 54.21% |
Span: 321bp (51.1%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Protochlamydia amoebophila (strain UWE25) GN=pnp PE=3 SV=2 |
| Match: Q3J9C0 |
score: 119 |
e-value: 2e-26 |
Identity: 55.45% |
Span: 330bp (52.5%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=pnp PE=3 SV=1 |
| Match: Q2NBZ2 |
score: 119 |
e-value: 2e-26 |
Identity: 57.14% |
Span: 315bp (50.2%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Erythrobacter litoralis (strain HTCC2594) GN=pnp PE=3 SV=1 |
| Match: B2UNA9 |
score: 118 |
e-value: 3e-26 |
Identity: 52.34% |
Span: 321bp (51.1%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=pnp PE=3 SV=1 |
| Match: Q5NQ32 |
score: 115 |
e-value: 2e-25 |
Identity: 56% |
Span: 300bp (47.8%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Zymomonas mobilis GN=pnp PE=3 SV=1 |
| Match: Q47D98 |
score: 115 |
e-value: 2e-25 |
Identity: 55.45% |
Span: 303bp (48.2%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Dechloromonas aromatica (strain RCB) GN=pnp PE=3 SV=1 |
| Match: Q0BPK3 |
score: 115 |
e-value: 2e-25 |
Identity: 52.78% |
Span: 324bp (51.6%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=pnp PE=3 ... |
| Match: A5GF91 |
score: 114 |
e-value: 5e-25 |
Identity: 50% |
Span: 318bp (50.6%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Geobacter uraniireducens (strain Rf4) GN=pnp PE=3 SV=1 |
| Match: Q9HV59 |
score: 113 |
e-value: 8e-25 |
Identity: 51.82% |
Span: 330bp (52.5%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas aeruginosa GN=pnp PE=3 SV=1 |
| Match: Q02FT2 |
score: 113 |
e-value: 8e-25 |
Identity: 51.82% |
Span: 330bp (52.5%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pnp PE=3 SV=1 |
| Match: B7V1F2 |
score: 113 |
e-value: 8e-25 |
Identity: 51.82% |
Span: 330bp (52.5%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=pnp PE=3 SV=1 |
| Match: A6VCJ6 |
score: 113 |
e-value: 8e-25 |
Identity: 51.82% |
Span: 330bp (52.5%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=pnp PE=3 SV=1 |
| Match: Q2G5F5 |
score: 113 |
e-value: 1e-24 |
Identity: 53.33% |
Span: 315bp (50.2%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=pnp PE=3 SV=1 |
| Match: A0LE14 |
score: 113 |
e-value: 1e-24 |
Identity: 52.88% |
Span: 312bp (49.7%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Magnetococcus sp. (strain MC-1) GN=pnp PE=3 SV=1 |
| Match: B3PIA0 |
score: 112 |
e-value: 1e-24 |
Identity: 51.82% |
Span: 330bp (52.5%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Cellvibrio japonicus (strain Ueda107) GN=pnp PE=3 SV=1 |
| Match: Q1AW48 |
score: 112 |
e-value: 2e-24 |
Identity: 50% |
Span: 318bp (50.6%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=pnp PE=3 SV=1 |
| Match: B9M1G5 |
score: 112 |
e-value: 2e-24 |
Identity: 50% |
Span: 318bp (50.6%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Geobacter sp. (strain FRC-32) GN=pnp PE=3 SV=1 |
| Match: Q1GVQ8 |
score: 111 |
e-value: 4e-24 |
Identity: 52.88% |
Span: 312bp (49.7%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Sphingopyxis alaskensis GN=pnp PE=3 SV=1 |
| Match: C6E2P5 |
score: 110 |
e-value: 5e-24 |
Identity: 54.64% |
Span: 291bp (46.3%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Geobacter sp. (strain M21) GN=pnp PE=3 SV=1 |
| Match: B9KYR9 |
score: 110 |
e-value: 7e-24 |
Identity: 50% |
Span: 312bp (49.7%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=pnp PE=3 ... |
| Match: Q2J2J4 |
score: 110 |
e-value: 7e-24 |
Identity: 53.27% |
Span: 321bp (51.1%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Rhodopseudomonas palustris (strain HaA2) GN=pnp PE=3 SV=1 |
| Match: Q2KE00 |
score: 110 |
e-value: 7e-24 |
Identity: 50.47% |
Span: 321bp (51.1%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=pnp PE=3 SV=1 |
| Match: B3PXD7 |
score: 110 |
e-value: 7e-24 |
Identity: 50.47% |
Span: 321bp (51.1%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Rhizobium etli (strain CIAT 652) GN=pnp PE=3 SV=2 |
| Match: Q9CLU1 |
score: 110 |
e-value: 7e-24 |
Identity: 50.91% |
Span: 330bp (52.5%) |
Frame: 2 |
| Polyribonucleotide nucleotidyltransferase OS=Pasteurella multocida GN=pnp PE=3 SV=1 |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
