| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|225432062|ref|XP_002280604.1| |
score: 268 |
e-value: 4e-70 |
Identity: 75.6% |
Span: 624bp (98.0%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270234235|emb|CBI22839.1| unnamed protein product [Vitis vinifera] |
| Match: gi|224099083|ref|XP_002311368.1| |
score: 249 |
e-value: 1e-64 |
Identity: 69.38% |
Span: 624bp (98.0%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi118485696|gb|ABK94698.1| unknown [Populus trichocarpa] >gi|222851188|gb|EE... |
| Match: gi|255556496|ref|XP_002519282.1| |
score: 244 |
e-value: 4e-63 |
Identity: 68.11% |
Span: 552bp (86.7%) |
Frame: 3 |
| tex protein-relatedtranscription accessory protein, putative [Ricinus communis] >gi223541597|gb|EEF43146.1| tex prote... |
| Match: gi|224112036|ref|XP_002316061.1| |
score: 244 |
e-value: 4e-63 |
Identity: 66.03% |
Span: 624bp (98.0%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222865101|gb|EEF02232.1| predicted protein [Populus trichocarpa] |
| Match: gi|133872|sp|P29344.1|RR1_SPIOL |
score: 244 |
e-value: 4e-63 |
Identity: 70.81% |
Span: 624bp (98.0%) |
Frame: 3 |
| RecName: Full=30S ribosomal protein S1, chloroplastic; AltName: Full=CS1; Flags: Precursor >gi18060|emb|CAA46927.1| r... |
| Match: gi|227204349|dbj|BAH57026.1| |
score: 238 |
e-value: 3e-61 |
Identity: 65.4% |
Span: 624bp (98.0%) |
Frame: 3 |
| AT5G30510 [Arabidopsis thaliana] |
| Match: gi|30692346|ref|NP_850903.1| |
score: 238 |
e-value: 3e-61 |
Identity: 65.4% |
Span: 624bp (98.0%) |
Frame: 3 |
| RPS1 (RIBOSOMAL PROTEIN S1); RNA binding / structural constituent of ribosome [Arabidopsis thaliana] >gi13877939|gb|A... |
| Match: gi|255635364|gb|ACU18035.1| |
score: 237 |
e-value: 8e-61 |
Identity: 64.59% |
Span: 624bp (98.0%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|242035925|ref|XP_002465357.1| |
score: 183 |
e-value: 1e-44 |
Identity: 52.88% |
Span: 624bp (98.0%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_01g037100 [Sorghum bicolor] >gi241919211|gb|EER92355.1| hypothetical protein SORBIDRA... |
| Match: gi|226501992|ref|NP_001150148.1| |
score: 182 |
e-value: 2e-44 |
Identity: 52.88% |
Span: 624bp (98.0%) |
Frame: 3 |
| LOC100283777 [Zea mays] >gi194703708|gb|ACF85938.1| unknown [Zea mays] >gi|195637122|gb|ACG38029.1| 30S ribosomal pro... |
| Match: gi|217072824|gb|ACJ84772.1| |
score: 178 |
e-value: 3e-43 |
Identity: 71.53% |
Span: 411bp (64.5%) |
Frame: 3 |
| unknown [Medicago truncatula] |
| Match: gi|108707823|gb|ABF95618.1| |
score: 170 |
e-value: 9e-41 |
Identity: 51.92% |
Span: 624bp (98.0%) |
Frame: 3 |
| 30S ribosomal protein S1, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|108707824|gb|ABF95619.1| |
score: 170 |
e-value: 9e-41 |
Identity: 51.92% |
Span: 624bp (98.0%) |
Frame: 3 |
| 30S ribosomal protein S1, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi1255... |
| Match: gi|115452675|ref|NP_001049938.1| |
score: 166 |
e-value: 1e-39 |
Identity: 60.76% |
Span: 474bp (74.4%) |
Frame: 3 |
| Os03g0315800 [Oryza sativa (japonica cultivar-group)] >gi113548409|dbj|BAF11852.1| Os03g0315800 [Oryza sativa Japonic... |
| Match: gi|168011566|ref|XP_001758474.1| |
score: 146 |
e-value: 1e-33 |
Identity: 51.9% |
Span: 474bp (74.4%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162690509|gb|EDQ76876.1| predicted protein [Physcomitrella... |
| Match: gi|168014820|ref|XP_001759949.1| |
score: 141 |
e-value: 6e-32 |
Identity: 50% |
Span: 474bp (74.4%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162688699|gb|EDQ75074.1| predicted protein [Physcomitrella... |
| Match: gi|222624814|gb|EEE58946.1| |
score: 134 |
e-value: 5e-30 |
Identity: 46.15% |
Span: 624bp (98.0%) |
Frame: 3 |
| hypothetical protein OsJ_10622 [Oryza sativa Japonica Group] |
| Match: gi|116790591|gb|ABK25672.1| |
score: 134 |
e-value: 9e-30 |
Identity: 49.26% |
Span: 405bp (63.6%) |
Frame: 3 |
| unknown [Picea sitchensis] |
| Match: gi|254432396|ref|ZP_05046099.1| |
score: 113 |
e-value: 2e-23 |
Identity: 42.57% |
Span: 444bp (69.7%) |
Frame: 3 |
| ribosomal protein S1 [Cyanobium sp. PCC 7001] >gi197626849|gb|EDY39408.1| ribosomal protein S1 [Cyanobium sp. PCC 7001] |
| Match: gi|78185433|ref|YP_377868.1| |
score: 110 |
e-value: 8e-23 |
Identity: 41.89% |
Span: 444bp (69.7%) |
Frame: 3 |
| 30S ribosomal protein S1 [Synechococcus sp. CC9902] >gi78169727|gb|ABB26824.1| SSU ribosomal protein S1P [Synechococc... |
| Match: gi|124023909|ref|YP_001018216.1| |
score: 110 |
e-value: 1e-22 |
Identity: 41.89% |
Span: 444bp (69.7%) |
Frame: 3 |
| 30S ribosomal protein S1 [Prochlorococcus marinus str. MIT 9303] >gi123964195|gb|ABM78951.1| 30S ribosomal protein S1... |
| Match: gi|33863935|ref|NP_895495.1| |
score: 110 |
e-value: 1e-22 |
Identity: 41.89% |
Span: 444bp (69.7%) |
Frame: 3 |
| 30S ribosomal protein S1 [Prochlorococcus marinus str. MIT 9313] >gi33635519|emb|CAE21843.1| 30S ribosomal protein S1... |
| Match: gi|113955395|ref|YP_729757.1| |
score: 109 |
e-value: 2e-22 |
Identity: 45.26% |
Span: 411bp (64.5%) |
Frame: 3 |
| 30S ribosomal protein S1 [Synechococcus sp. CC9311] >gi113882746|gb|ABI47704.1| ribosomal protein S1 [Synechococcus s... |
| Match: gi|116072655|ref|ZP_01469921.1| |
score: 108 |
e-value: 3e-22 |
Identity: 41.22% |
Span: 444bp (69.7%) |
Frame: 3 |
| 30S ribosomal protein S1 [Synechococcus sp. BL107] >gi116064542|gb|EAU70302.1| 30S ribosomal protein S1 [Synechococcu... |
| Match: gi|113478043|ref|YP_724104.1| |
score: 108 |
e-value: 3e-22 |
Identity: 46.76% |
Span: 417bp (65.5%) |
Frame: 3 |
| 30S ribosomal protein S1 [Trichodesmium erythraeum IMS101] >gi110169091|gb|ABG53631.1| SSU ribosomal protein S1P [Tri... |
|
| 80 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 1 hits recorded |
| Match: At5G30510.1 |
score: 238 |
e-value: 2e-63 |
Identity: 65.4% |
Span: 624bp (98.0%) |
Frame: 3 |
| Symbols: ARRPS1, RPS1 | RPS1 (ribosomal protein S1); RNA binding | chr5:11636492-11638453 REVERSE |
|
| swissprot [blastx] | Showing best 6 hits recorded |
| Match: P29344 |
score: 244 |
e-value: 2e-64 |
Identity: 70.81% |
Span: 624bp (98.0%) |
Frame: 3 |
| 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea GN=RPS1 PE=1 SV=1 |
| Match: P73530 |
score: 104 |
e-value: 4e-22 |
Identity: 46.27% |
Span: 402bp (63.1%) |
Frame: 3 |
| 30S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803) GN=rps1A PE=3 SV=1 |
| Match: P46228 |
score: 100 |
e-value: 1e-20 |
Identity: 43.48% |
Span: 414bp (65.0%) |
Frame: 3 |
| 30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpsA PE=1 SV=4 |
| Match: P51345 |
score: 79 |
e-value: 2e-14 |
Identity: 40.71% |
Span: 327bp (51.3%) |
Frame: 3 |
| 30S ribosomal protein S1, chloroplastic OS=Porphyra purpurea GN=rps1 PE=3 SV=1 |
| Match: Q1XDE2 |
score: 77.8 |
e-value: 5e-14 |
Identity: 40.18% |
Span: 324bp (50.9%) |
Frame: 3 |
| 30S ribosomal protein S1, chloroplastic OS=Porphyra yezoensis GN=rps1 PE=3 SV=2 |
| Match: O33698 |
score: 70.9 |
e-value: 6e-12 |
Identity: 38.24% |
Span: 306bp (48.0%) |
Frame: 3 |
| 30S ribosomal protein S1 OS=Synechococcus elongatus (strain PCC 7942) GN=rpsA PE=3 SV=1 |
|
