| genbank/nr [blastx] | Showing best 53 hits recorded |
| Match: gi|15231065|ref|NP_190756.1| |
score: 92.82 |
e-value: 3.8e-18 |
Identity: 65.49% |
Span: 336bp (52.5%) |
Frame: 1 |
| HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcriptio... |
| Match: gi|123379|sp|P26585|HMGL_SOYBN |
score: 80.11 |
e-value: 2.5e-14 |
Identity: 76.47% |
Span: 204bp (31.9%) |
Frame: 1 |
| gi|123379|sp|P26585|HMGL_SOYBN HMG1/2-like protein (SB11 protein) gi|99914|pir||S22309 high mobility group protein HM... |
| Match: gi|18394900|ref|NP_564124.1| |
score: 77.8 |
e-value: 1.3e-13 |
Identity: 73.13% |
Span: 201bp (31.4%) |
Frame: 1 |
| HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcriptio... |
| Match: gi|7446228|pir||T03375 |
score: 77.8 |
e-value: 1.3e-13 |
Identity: 67.65% |
Span: 204bp (31.9%) |
Frame: 1 |
| gi|7446228|pir||T03375 high mobility group protein HMGd1 - maize gi|2196672|emb|CAA70045.1| HMGd1 [Zea mays] gi|22135... |
| Match: gi|25402921|pir||F86339 |
score: 77.8 |
e-value: 1.3e-13 |
Identity: 73.13% |
Span: 201bp (31.4%) |
Frame: 1 |
| gi|25402921|pir||F86339 protein F2D10.18 [imported] - Arabidopsis thaliana gi|8886929|gb|AAF80615.1| F2D10.18 [Arabid... |
| Match: gi|17017392|gb|AAL33650.1| |
score: 77.41 |
e-value: 1.7e-13 |
Identity: 67.65% |
Span: 204bp (31.9%) |
Frame: 1 |
| gi|17017392|gb|AAL33650.1| HMG-like nucleosome/chromatin assembly factor D [Zea mays] |
| Match: gi|25402921|pir||F86339 |
score: 77.03 |
e-value: 2.2e-13 |
Identity: 71.64% |
Span: 201bp (31.4%) |
Frame: 1 |
| gi|25402921|pir||F86339 protein F2D10.18 [imported] - Arabidopsis thaliana gi|8886929|gb|AAF80615.1| F2D10.18 [Arabid... |
| Match: gi|7446213|pir||T02252 |
score: 77.03 |
e-value: 2.2e-13 |
Identity: 70.59% |
Span: 204bp (31.9%) |
Frame: 1 |
| gi|7446213|pir||T02252 high mobility group protein HMG-1 - common tobacco gi|2196548|gb|AAB61215.1| DNA-binding prote... |
| Match: gi|18394898|ref|NP_564123.1| |
score: 77.03 |
e-value: 2.2e-13 |
Identity: 71.64% |
Span: 201bp (31.4%) |
Frame: 1 |
| HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcriptio... |
| Match: gi|7446212|pir||T07377 |
score: 76.64 |
e-value: 2.8e-13 |
Identity: 70.15% |
Span: 201bp (31.4%) |
Frame: 1 |
| gi|7446212|pir||T07377 high mobility group protein - potato gi|2894109|emb|CAA05365.1| high mobility group protein [S... |
| Match: gi|1052956|gb|AAC50019.1| |
score: 76.26 |
e-value: 3.7e-13 |
Identity: 67.65% |
Span: 204bp (31.9%) |
Frame: 1 |
| high mobility group protein 2 HMG2 [Ipomoea nil] |
| Match: gi|541968|pir||S40122 |
score: 75.1 |
e-value: 8.2e-13 |
Identity: 73.53% |
Span: 204bp (31.9%) |
Frame: 1 |
| gi|541968|pir||S40122 high mobility group protein HMG-1 - garden pea gi|436424|emb|CAA54168.1| HMG 1 protein [Pisum s... |
| Match: gi|729736|sp|P40619|HMGL_PHANI |
score: 74.71 |
e-value: 1.1e-12 |
Identity: 66.18% |
Span: 204bp (31.9%) |
Frame: 1 |
| gi|729736|sp|P40619|HMGL_PHANI HMG1/2-like protein gi|1085860|pir||S40302 high mobility group protein HMG-1 - Pharbit... |
| Match: gi|123378|sp|P27347|MNBB_MAIZE |
score: 72.4 |
e-value: 5.3e-12 |
Identity: 65.15% |
Span: 198bp (30.9%) |
Frame: 1 |
| gi|123378|sp|P27347|MNBB_MAIZE DNA-binding protein MNB1B (HMG1-like protein) gi|539062|pir||B47150 high mobility grou... |
| Match: gi|7446229|pir||T03640 |
score: 72.4 |
e-value: 5.3e-12 |
Identity: 65.15% |
Span: 198bp (30.9%) |
Frame: 1 |
| gi|7446229|pir||T03640 high mobility group protein MNB1b - maize (fragment) gi|397396|emb|CAA46876.1| DNA-binding pro... |
| Match: gi|3885888|gb|AAC78104.1| |
score: 70.86 |
e-value: 1.5e-11 |
Identity: 65.15% |
Span: 198bp (30.9%) |
Frame: 1 |
| gi|3885888|gb|AAC78104.1| high mobility group protein [Oryza sativa] gi|23345287|gb|AAN28722.1| HMG1 protein [Oryza s... |
| Match: gi|7446231|pir||T09581 |
score: 69.32 |
e-value: 4.5e-11 |
Identity: 62.69% |
Span: 201bp (31.4%) |
Frame: 1 |
| gi|7446231|pir||T09581 probable high mobility group protein HMG1 - sword bean gi|1813329|dbj|BAA19156.1| HMG-1 [Canav... |
| Match: gi|729738|sp|P40621|HMGL_WHEAT |
score: 67.78 |
e-value: 1.3e-10 |
Identity: 65.15% |
Span: 198bp (30.9%) |
Frame: 1 |
| gi|729738|sp|P40621|HMGL_WHEAT HMG1/2-like protein gi|100791|pir||S18991 high mobility group protein - wheat gi|21803... |
| Match: gi|950053|emb|CAA90679.1| |
score: 66.63 |
e-value: 2.9e-10 |
Identity: 62.12% |
Span: 198bp (30.9%) |
Frame: 1 |
| gi|950053|emb|CAA90679.1| HMG1/2-like protein [Hordeum vulgare subsp. vulgare] |
| Match: gi|18419623|gb|AAL69379.1| |
score: 65.85 |
e-value: 5e-10 |
Identity: 76.92% |
Span: 117bp (18.3%) |
Frame: 1 |
| gi|18419623|gb|AAL69379.1| HMG-domain containing protein [Narcissus pseudonarcissus] |
| Match: gi|729737|sp|P40620|HMGL_VICFA |
score: 65.47 |
e-value: 6.5e-10 |
Identity: 59.7% |
Span: 201bp (31.4%) |
Frame: 1 |
| gi|729737|sp|P40620|HMGL_VICFA HMG1/2-like protein gi|541981|pir||S39556 high mobility group protein HMG - fava bean |
| Match: gi|11346367|pir||T51596 |
score: 63.16 |
e-value: 3.2e-09 |
Identity: 61.19% |
Span: 201bp (31.4%) |
Frame: 1 |
| gi|11346367|pir||T51596 high mobility group protein HMG-gamma [validated] - Arabidopsis thaliana gi|2832355|emb|CAA74... |
| Match: gi|21592453|gb|AAM64404.1| |
score: 63.16 |
e-value: 3.2e-09 |
Identity: 61.19% |
Span: 201bp (31.4%) |
Frame: 1 |
| gi|21592453|gb|AAM64404.1| putative HMG protein [Arabidopsis thaliana] |
| Match: gi|15227862|ref|NP_179347.1| |
score: 62 |
e-value: 7.2e-09 |
Identity: 59.7% |
Span: 201bp (31.4%) |
Frame: 1 |
| gi|15227862|ref|NP_179347.1| HMG protein -related [Arabidopsis thaliana] gi|25385737|pir||F84553 probable HMG protein... |
| Match: gi|13877775|gb|AAK43965.1| |
score: 62 |
e-value: 7.2e-09 |
Identity: 58.21% |
Span: 201bp (31.4%) |
Frame: 1 |
| gi|13877775|gb|AAK43965.1| putative HMG protein [Arabidopsis thaliana] |
| Match: gi|4468042|emb|CAB37859.1| |
score: 59.31 |
e-value: 4.7e-08 |
Identity: 57.81% |
Span: 192bp (30.0%) |
Frame: 1 |
| gi|4468042|emb|CAB37859.1| unnamed protein product [Vicia faba] |
| Match: gi|18403553|ref|NP_565788.1| |
score: 57.77 |
e-value: 1.4e-07 |
Identity: 43.28% |
Span: 201bp (31.4%) |
Frame: 1 |
| high mobility group (HMG1/2) family protein [Arabidopsis thaliana] >gi20197083|gb|AAC26692.2| putative HMG protein [A... |
| Match: gi|15237040|ref|NP_195282.1| |
score: 56.61 |
e-value: 3e-07 |
Identity: 50.77% |
Span: 195bp (30.5%) |
Frame: 1 |
| gi|15237040|ref|NP_195282.1| HMG delta protein [Arabidopsis thaliana] gi|7446230|pir||T04662 high mobility group prot... |
| Match: gi|7446227|pir||T03374 |
score: 53.91 |
e-value: 2e-06 |
Identity: 58.97% |
Span: 117bp (18.3%) |
Frame: 1 |
| gi|7446227|pir||T03374 high mobility group protein HMGc2 - maize gi|1845197|emb|CAA69606.1| HMGc2 [Zea mays] |
| Match: gi|18700443|dbj|BAB85204.1| |
score: 53.91 |
e-value: 2e-06 |
Identity: 50% |
Span: 204bp (31.9%) |
Frame: 1 |
| gi|18700443|dbj|BAB85204.1| high mobility group box protein 2 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|17017396|gb|AAL33652.1| |
score: 52.37 |
e-value: 5.7e-06 |
Identity: 53.85% |
Span: 117bp (18.3%) |
Frame: 1 |
| gi|17017396|gb|AAL33652.1| HMG type nucleosome/chromatin assembly factor D [Zea mays] gi|22135475|gb|AAM93218.1| nucl... |
| Match: gi|7446226|pir||T03372 |
score: 51.22 |
e-value: 1.3e-05 |
Identity: 45.59% |
Span: 204bp (31.9%) |
Frame: 1 |
| gi|7446226|pir||T03372 high mobility group protein HMGc1 - maize gi|1845195|emb|CAA69605.1| HMGc1 [Zea mays] gi|54415... |
| Match: gi|38345400|emb|CAE03091.2| |
score: 49.68 |
e-value: 3.7e-05 |
Identity: 56.76% |
Span: 111bp (17.3%) |
Frame: 1 |
| gi|38345400|emb|CAE03091.2| OSJNBa0017B10.6 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|17017394|gb|AAL33651.1| |
score: 49.68 |
e-value: 3.7e-05 |
Identity: 44.12% |
Span: 204bp (31.9%) |
Frame: 1 |
| gi|17017394|gb|AAL33651.1| HMG-like nucleosome/chromatin assembly factor D [Zea mays] |
| Match: gi|7485471|pir||T02332 |
score: 47.37 |
e-value: 0.00018 |
Identity: 45.83% |
Span: 117bp (18.3%) |
Frame: 1 |
| gi|7485471|pir||T02332 probable HMG protein [imported] - Arabidopsis thaliana |
| Match: gi|18420676|ref|NP_568431.1| |
score: 46.98 |
e-value: 0.00024 |
Identity: 47.62% |
Span: 189bp (29.5%) |
Frame: 1 |
| gi|18420676|ref|NP_568431.1| expressed protein [Arabidopsis thaliana] gi|21554154|gb|AAM63233.1| unknown [Arabidopsis... |
| Match: gi|4995921|emb|CAB44297.1| |
score: 46.98 |
e-value: 0.00024 |
Identity: 54.05% |
Span: 111bp (17.3%) |
Frame: 1 |
| gi|4995921|emb|CAB44297.1| HMG1 protein [Zea mays] |
| Match: gi|9759080|dbj|BAB09558.1| |
score: 46.98 |
e-value: 0.00024 |
Identity: 47.62% |
Span: 189bp (29.5%) |
Frame: 1 |
| gi|9759080|dbj|BAB09558.1| gene_id:K19M13.4~unknown protein [Arabidopsis thaliana] |
| Match: gi|126226|sp|P11873|LG1_TETTH |
score: 40.82 |
e-value: 0.017 |
Identity: 41.79% |
Span: 201bp (31.4%) |
Frame: 1 |
| gi|126226|sp|P11873|LG1_TETTH Nonhistone chromosomal protein LG-1 gi|84355|pir||A26989 nonhistone chromosomal protein... |
| Match: gi|729732|sp|P40627|HMGC_TETTH |
score: 40.82 |
e-value: 0.017 |
Identity: 40.3% |
Span: 201bp (31.4%) |
Frame: 1 |
| gi|729732|sp|P40627|HMGC_TETTH High-mobility-group protein C gi|161796|gb|AAA30120.1| high-mobility-group protein C |
| Match: gi|6323717|ref|NP_013788.1| |
score: 40.82 |
e-value: 0.017 |
Identity: 34.33% |
Span: 201bp (31.4%) |
Frame: 1 |
| gi|6323717|ref|NP_013788.1| HMG-1 homolog, mitochondrial; Abf2p [Saccharomyces cerevisiae] gi|398988|sp|Q02486|ABF2_Y... |
| Match: gi|7544638|gb|AAA73079.2| |
score: 40.82 |
e-value: 0.017 |
Identity: 34.33% |
Span: 201bp (31.4%) |
Frame: 1 |
| gi|7544638|gb|AAA73079.2| unknown [Saccharomyces cerevisiae] |
| Match: gi|539449|pir||A48217 |
score: 40.43 |
e-value: 0.022 |
Identity: 42.11% |
Span: 114bp (17.8%) |
Frame: 1 |
| gi|539449|pir||A48217 single-strand DNA/RNA recognition protein - fruit fly (Drosophila melanogaster) gi|290280|gb|A... |
| Match: gi|34910914|ref|NP_916804.1| |
score: 39.66 |
e-value: 0.038 |
Identity: 62.5% |
Span: 72bp (11.2%) |
Frame: 1 |
| gi|34910914|ref|NP_916804.1| OSJNBb0063G05.2 [Oryza sativa (japonica cultivar-group)] gi|20161572|dbj|BAB90493.1| OSJ... |
| Match: gi|28557563|gb|AAO45187.1| |
score: 39.28 |
e-value: 0.05 |
Identity: 42.11% |
Span: 114bp (17.8%) |
Frame: 1 |
| gi|28557563|gb|AAO45187.1| SD06504p [Drosophila melanogaster] |
| Match: gi|24762396|ref|NP_523830.2| |
score: 39.28 |
e-value: 0.05 |
Identity: 42.11% |
Span: 114bp (17.8%) |
Frame: 1 |
| gi|24762396|ref|NP_523830.2| Structure specific recognition protein CG4817-PA [Drosophila melanogaster] gi|12644386|s... |
| Match: gi|13786797|pdb|1E7J|A |
score: 38.89 |
e-value: 0.065 |
Identity: 44.74% |
Span: 114bp (17.8%) |
Frame: 1 |
| gi|13786797|pdb|1E7J|A Chain A, Hmg-D Complexed To A Bulge Dna |
| Match: gi|24657284|ref|NP_726109.1| |
score: 38.89 |
e-value: 0.065 |
Identity: 44.74% |
Span: 114bp (17.8%) |
Frame: 1 |
| gi|24657284|ref|NP_726109.1| High mobility group protein D CG17950-PA [Drosophila melanogaster] gi|24657287|ref|NP_72... |
| Match: gi|1421267|pdb|1HMA| |
score: 38.89 |
e-value: 0.065 |
Identity: 44.74% |
Span: 114bp (17.8%) |
Frame: 1 |
| gi|1421267|pdb|1HMA| Hmg-D (Hmg-Box Domain, Residues 2 - 74) (Nmr, 20 Structures) |
| Match: gi|729742|sp|P40625|HMG_TETPY |
score: 38.89 |
e-value: 0.065 |
Identity: 41.79% |
Span: 201bp (31.4%) |
Frame: 1 |
| gi|729742|sp|P40625|HMG_TETPY High-mobility-group protein (Nonhistone chromosomal protein) gi|84332|pir||JU0038 nonhi... |
| Match: gi|6730529|pdb|1QRV|A |
score: 38.89 |
e-value: 0.065 |
Identity: 44.74% |
Span: 114bp (17.8%) |
Frame: 1 |
| gi|6730529|pdb|1QRV|A Chain A, Crystal Structure Of The Complex Of Hmg-D And Dna gi|6730530|pdb|1QRV|B Chain B, Cryst... |
| Match: gi|38047835|gb|AAR09820.1| |
score: 38.89 |
e-value: 0.065 |
Identity: 44.74% |
Span: 114bp (17.8%) |
Frame: 1 |
| gi|38047835|gb|AAR09820.1| similar to Drosophila melanogaster HmgD [Drosophila yakuba] |
| Match: gi|31239599|ref|XP_320213.1| |
score: 38.51 |
e-value: 0.085 |
Identity: 44.74% |
Span: 114bp (17.8%) |
Frame: 1 |
| gi|31239599|ref|XP_320213.1| ENSANGP00000009009 [Anopheles gambiae] gi|21288039|gb|EAA00360.1| ENSANGP00000009009 [An... |
|
| arabidopsis/peptide [blastx] | Showing best 8 hits recorded |
| Match: At3g51880.1 |
score: 92.82 |
e-value: 1.4e-19 |
Identity: 65.49% |
Span: 336bp (52.5%) |
Frame: 1 |
| At3g51880.1 68410.m05273 high mobility group protein 2-related |
| Match: At1g20696.1 |
score: 77.8 |
e-value: 4.7e-15 |
Identity: 73.13% |
Span: 201bp (31.4%) |
Frame: 1 |
| At1g20696.1 68408.m02339 expressed protein |
| Match: At1g20693.1 |
score: 77.03 |
e-value: 8e-15 |
Identity: 71.64% |
Span: 201bp (31.4%) |
Frame: 1 |
| At1g20693.1 68408.m02338 expressed protein |
| Match: At2g17560.1 |
score: 62 |
e-value: 2.7e-10 |
Identity: 59.7% |
Span: 201bp (31.4%) |
Frame: 1 |
| At2g17560.1 68409.m01829 HMG protein -related |
| Match: At2g34450.1 |
score: 57.77 |
e-value: 5e-09 |
Identity: 43.28% |
Span: 201bp (31.4%) |
Frame: 1 |
| At2g34450.1 68409.m03818 HMG protein -related |
| Match: At4g35570.1 |
score: 56.61 |
e-value: 1.1e-08 |
Identity: 50.77% |
Span: 195bp (30.5%) |
Frame: 1 |
| At4g35570.1 68411.m04592 HMG delta protein |
| Match: At5g23420.1 |
score: 46.98 |
e-value: 8.8e-06 |
Identity: 47.62% |
Span: 189bp (29.5%) |
Frame: 1 |
| At5g23420.1 68412.m02518 expressed protein |
| Match: At3g28730.1 |
score: 33.88 |
e-value: 0.077 |
Identity: 43.59% |
Span: 117bp (18.3%) |
Frame: 1 |
| At3g28730.1 68410.m03293 recombination signal sequence recognition protein -related similar to recombination signal s... |
|
