| genbank/nr [blastx] | Showing best 35 hits recorded |
| Match: gi|32488659|emb|CAE03586.1| |
score: 189.9 |
e-value: 2.8e-47 |
Identity: 57.53% |
Span: 513bp (79.8%) |
Frame: 1 |
| gi|32488659|emb|CAE03586.1| OSJNBa0087O24.9 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|46389843|dbj|BAD15406.1| |
score: 172.6 |
e-value: 4.7e-42 |
Identity: 54.8% |
Span: 513bp (79.8%) |
Frame: 1 |
| gi|46389843|dbj|BAD15406.1| KH domain-containing protein-like [Oryza sativa (japonica cultivar-group)] |
| Match: gi|9294110|dbj|BAB01961.1| |
score: 148.3 |
e-value: 9.4e-35 |
Identity: 47.37% |
Span: 513bp (79.8%) |
Frame: 1 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|18399496|ref|NP_566412.1| |
score: 148.3 |
e-value: 9.4e-35 |
Identity: 47.37% |
Span: 513bp (79.8%) |
Frame: 1 |
| KH domain-containing protein / zinc finger (CCCH type) family protein [Arabidopsis thaliana] >gi75268236|sp|Q9C7C3.1|... |
| Match: gi|21555233|gb|AAM63810.1| |
score: 139.4 |
e-value: 4.4e-32 |
Identity: 45.9% |
Span: 513bp (79.8%) |
Frame: 1 |
| unknown [Arabidopsis thaliana] |
| Match: gi|15240145|ref|NP_196295.1| |
score: 139 |
e-value: 5.7e-32 |
Identity: 46.45% |
Span: 513bp (79.8%) |
Frame: 1 |
| KH domain-containing protein / zinc finger (CCCH type) family protein [Arabidopsis thaliana] >gi75262408|sp|Q9FG30.1|... |
| Match: gi|17557820|ref|NP_505632.1| |
score: 48.52 |
e-value: 0.0001 |
Identity: 31.75% |
Span: 375bp (58.3%) |
Frame: 1 |
| gi|17557820|ref|NP_505632.1| putative RNA binding protein with KH domain(s) family member (5K718) [Caenorhabditis ele... |
| Match: gi|17557818|ref|NP_505633.1| |
score: 48.52 |
e-value: 0.0001 |
Identity: 31.75% |
Span: 375bp (58.3%) |
Frame: 1 |
| gi|17557818|ref|NP_505633.1| putative RNA binding protein with KH domain(s) family member (65.6 kD) (5K718) [Caenorha... |
| Match: gi|46389843|dbj|BAD15406.1| |
score: 47.37 |
e-value: 0.00023 |
Identity: 41.07% |
Span: 162bp (25.2%) |
Frame: 1 |
| gi|46389843|dbj|BAD15406.1| KH domain-containing protein-like [Oryza sativa (japonica cultivar-group)] |
| Match: gi|4580020|gb|AAD24207.1| |
score: 46.21 |
e-value: 0.0005 |
Identity: 46.81% |
Span: 138bp (21.5%) |
Frame: 1 |
| gi|4580020|gb|AAD24207.1| CCCH zinc finger protein C3H-1 [Xenopus laevis] |
| Match: gi|1575607|gb|AAC50892.1| |
score: 45.44 |
e-value: 0.00086 |
Identity: 29.77% |
Span: 345bp (53.7%) |
Frame: 1 |
| gi|1575607|gb|AAC50892.1| FUSE binding protein 2 [Homo sapiens] |
| Match: gi|37078468|sp|Q92945|FUB2_HUMAN |
score: 45.44 |
e-value: 0.00086 |
Identity: 29.77% |
Span: 345bp (53.7%) |
Frame: 1 |
| gi|37078468|sp|Q92945|FUB2_HUMAN Far upstream element binding protein 2 (FUSE binding protein 2) (KH type splicing re... |
| Match: gi|39593301|emb|CAE64771.1| |
score: 44.67 |
e-value: 0.001 |
Identity: 34.57% |
Span: 240bp (37.3%) |
Frame: 1 |
| gi|39593301|emb|CAE64771.1| Hypothetical protein CBG09562 [Caenorhabditis briggsae] |
| Match: gi|542643|pir||S41224 |
score: 44.67 |
e-value: 0.001 |
Identity: 33.33% |
Span: 225bp (35.0%) |
Frame: 1 |
| gi|542643|pir||S41224 hnRNP protein - African clawed frog gi|299029|gb|AAB26047.1| pre-mRNA binding K protein, hnRNP ... |
| Match: gi|32488659|emb|CAE03586.1| |
score: 44.28 |
e-value: 0.002 |
Identity: 44.68% |
Span: 138bp (21.5%) |
Frame: 1 |
| gi|32488659|emb|CAE03586.1| OSJNBa0087O24.9 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|47085903|ref|NP_998309.1| |
score: 43.9 |
e-value: 0.003 |
Identity: 30.77% |
Span: 264bp (41.1%) |
Frame: 1 |
| gi|47085903|ref|NP_998309.1| zgc:66046 [Danio rerio] >gi|40555849|gb|AAH64649.1| Zgc:66046 [Danio rerio] |
| Match: gi|46229863|gb|EAK90681.1| |
score: 43.9 |
e-value: 0.003 |
Identity: 53.12% |
Span: 96bp (14.9%) |
Frame: 1 |
| gi|46229863|gb|EAK90681.1| 3CCCH domain containing protein (this domain expanded in plasmodium), transcripts identifi... |
| Match: gi|26341878|dbj|BAC34601.1| |
score: 43.9 |
e-value: 0.003 |
Identity: 29.81% |
Span: 306bp (47.6%) |
Frame: 1 |
| gi|26341878|dbj|BAC34601.1| unnamed protein product [Mus musculus] gi|26353476|dbj|BAC40368.1| unnamed protein produc... |
| Match: gi|12230546|sp|O19049|ROK_RABIT |
score: 43.9 |
e-value: 0.003 |
Identity: 29.81% |
Span: 306bp (47.6%) |
Frame: 1 |
| gi|12230546|sp|O19049|ROK_RABIT Heterogeneous nuclear ribonucleoprotein K (hnRNP K) gi|2644968|emb|CAA05815.1| hnRNP-... |
| Match: gi|13384620|ref|NP_079555.1| |
score: 43.9 |
e-value: 0.003 |
Identity: 29.81% |
Span: 306bp (47.6%) |
Frame: 1 |
| gi|13384620|ref|NP_079555.1| heterogeneous nuclear ribonucleoprotein K [Mus musculus] gi|14165435|ref|NP_112552.1| he... |
| Match: gi|460789|emb|CAA51267.1| |
score: 43.51 |
e-value: 0.003 |
Identity: 28.7% |
Span: 318bp (49.5%) |
Frame: 1 |
| gi|460789|emb|CAA51267.1| transformation upregulated nuclear protein [Homo sapiens] |
| Match: gi|473912|gb|AAA21731.1| |
score: 43.51 |
e-value: 0.003 |
Identity: 28.7% |
Span: 318bp (49.5%) |
Frame: 1 |
| gi|473912|gb|AAA21731.1| phosphoprotein |
| Match: gi|27882469|gb|AAH44711.1| |
score: 43.51 |
e-value: 0.003 |
Identity: 32% |
Span: 225bp (35.0%) |
Frame: 1 |
| gi|27882469|gb|AAH44711.1| Hnrpk-prov protein [Xenopus laevis] |
| Match: gi|1083569|pir||A54143 |
score: 43.51 |
e-value: 0.003 |
Identity: 28.7% |
Span: 318bp (49.5%) |
Frame: 1 |
| gi|1083569|pir||A54143 kappa-B motif-binding phosphoprotein - mouse |
| Match: gi|14165437|ref|NP_112553.1| |
score: 43.51 |
e-value: 0.003 |
Identity: 28.7% |
Span: 318bp (49.5%) |
Frame: 1 |
| gi|14165437|ref|NP_112553.1| heterogeneous nuclear ribonucleoprotein K isoform a; dC-stretch binding protein; transfo... |
| Match: gi|18402211|ref|NP_566631.1| |
score: 43.51 |
e-value: 0.003 |
Identity: 44.44% |
Span: 132bp (20.5%) |
Frame: 1 |
| zinc finger (CCCH-type) family protein [Arabidopsis thaliana] >gi75274079|sp|Q9LT81.1|C3H39_ARATH RecName: Full=Zinc ... |
| Match: gi|47085687|ref|NP_998159.1| |
score: 43.51 |
e-value: 0.003 |
Identity: 29.55% |
Span: 264bp (41.1%) |
Frame: 1 |
| gi|47085687|ref|NP_998159.1| heterogeneous nuclear ribonucleoprotein K [Danio rerio] >gi|32451938|gb|AAH54653.1| Hete... |
| Match: gi|15236094|ref|NP_194330.1| |
score: 43.13 |
e-value: 0.004 |
Identity: 30.48% |
Span: 291bp (45.3%) |
Frame: 1 |
| PEP (PEPPER); RNA binding / nucleic acid binding [Arabidopsis thaliana] >gi4538929|emb|CAB39665.1| putative nucleic a... |
| Match: gi|18129298|emb|CAC83362.1| |
score: 43.13 |
e-value: 0.004 |
Identity: 58.06% |
Span: 90bp (14.0%) |
Frame: 1 |
| gi|18129298|emb|CAC83362.1| similarity to the EST C99174 [Pinus pinaster] |
| Match: gi|45361501|ref|NP_989327.1| |
score: 43.13 |
e-value: 0.004 |
Identity: 32% |
Span: 225bp (35.0%) |
Frame: 1 |
| gi|45361501|ref|NP_989327.1| hypothetical protein MGC75642 [Xenopus tropicalis] >gi|39794355|gb|AAH64170.1| Hypotheti... |
| Match: gi|22218811|pdb|1J5K|A |
score: 42.36 |
e-value: 0.007 |
Identity: 32% |
Span: 225bp (35.0%) |
Frame: 1 |
| gi|22218811|pdb|1J5K|A Chain A, Complex Of The Kh3 Domain Of Hnrnp K With A Single_stranded 10mer Dna Oligonucleotide |
| Match: gi|4504865|ref|NP_003676.1| |
score: 42.36 |
e-value: 0.007 |
Identity: 28.47% |
Span: 345bp (53.7%) |
Frame: 1 |
| gi|4504865|ref|NP_003676.1| KH-type splicing regulatory protein (FUSE binding protein 2); KH-type splicing regulatory... |
| Match: gi|34905220|ref|NP_913957.1| |
score: 41.97 |
e-value: 0.01 |
Identity: 45.65% |
Span: 126bp (19.6%) |
Frame: 1 |
| gi|34905220|ref|NP_913957.1| P0672D01.12 [Oryza sativa (japonica cultivar-group)] gi|29467558|dbj|BAC66728.1| putativ... |
| Match: gi|13752126|emb|CAC32255.2| |
score: 41.97 |
e-value: 0.01 |
Identity: 40% |
Span: 150bp (23.3%) |
Frame: 1 |
| gi|13752126|emb|CAC32255.2| hypothetical zf-CCCH protein L5213.07 [Leishmania major] |
| Match: gi|23508548|ref|NP_701217.1| |
score: 41.97 |
e-value: 0.01 |
Identity: 46.15% |
Span: 114bp (17.7%) |
Frame: 1 |
| gi|23508548|ref|NP_701217.1| hypothetical protein [Plasmodium falciparum 3D7] gi|23496283|gb|AAN35941.1| hypothetical... |
|
| arabidopsis/peptide [blastx] | Showing best 8 hits recorded |
| Match: At3g12130.1 |
score: 148.3 |
e-value: 2.8e-36 |
Identity: 47.37% |
Span: 513bp (79.8%) |
Frame: 1 |
| At3g12130.1 68410.m01352 KH domain/zinc finger protein |
| Match: At5g06770.1 |
score: 139 |
e-value: 1.7e-33 |
Identity: 46.45% |
Span: 513bp (79.8%) |
Frame: 1 |
| At5g06770.1 68412.m00709 KH domain/zinc finger protein contains similarity to unknown protein (dbj|BAA82391.1) |
| Match: At3g19360.1 |
score: 43.51 |
e-value: 9.8e-05 |
Identity: 44.44% |
Span: 132bp (20.5%) |
Frame: 1 |
| At3g19360.1 68410.m02217 expressed protein |
| Match: At4g26000.1 |
score: 43.13 |
e-value: 0.00013 |
Identity: 30.48% |
Span: 291bp (45.3%) |
Frame: 1 |
| At4g26000.1 68411.m03409 KH domain protein single-stranded nucleic acid-binding protein CBP - mouse, PIR2:S78515 |
| Match: At3g19360.1 |
score: 41.59 |
e-value: 0.00037 |
Identity: 58.62% |
Span: 84bp (13.1%) |
Frame: 1 |
| At3g19360.1 68410.m02217 expressed protein |
| Match: At2g35430.1 |
score: 40.82 |
e-value: 0.00063 |
Identity: 58.62% |
Span: 84bp (13.1%) |
Frame: 1 |
| At2g35430.1 68409.m03927 hypothetical protein and genefinder |
| Match: At1g32360.1 |
score: 40.05 |
e-value: 0.001 |
Identity: 48.57% |
Span: 102bp (15.9%) |
Frame: 1 |
| At1g32360.1 68408.m03614 MYB family transcription factor -related similar to GB:AAD33584 from [Arabidopsis thaliana] ... |
| Match: At1g32360.1 |
score: 36.96 |
e-value: 0.009 |
Identity: 45.16% |
Span: 93bp (14.5%) |
Frame: 1 |
| At1g32360.1 68408.m03614 MYB family transcription factor -related similar to GB:AAD33584 from [Arabidopsis thaliana] ... |
|
