| arabidopsis/peptide [blastx] | Showing best 13 hits recorded |
| Match: At1G48920.1 |
score: 80.1 |
e-value: 1e-15 |
Identity: 45.91% |
Span: 432bp (67.2%) |
Frame: 1 |
| Symbols: ATNUC-L1, PARL1 | nucleolin, putative | chr1:18101854-18105090 FORWARD |
| Match: At3G18610.1 |
score: 76.6 |
e-value: 1e-14 |
Identity: 40.7% |
Span: 255bp (39.7%) |
Frame: 1 |
| Symbols: ATRANGAP1 | ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding | chr3:6404276-6407828 REVERSE |
| Match: At5G03480.1 |
score: 52.8 |
e-value: 2e-07 |
Identity: 36.14% |
Span: 246bp (38.3%) |
Frame: 1 |
| | Symbol: None | expressed protein, ; expression supported by MPSS | chr5:869207-870854 REVERSE | Aliases: F12E4.250,... |
| Match: At5G53700.1 |
score: 51.2 |
e-value: 5e-07 |
Identity: 37.97% |
Span: 231bp (35.9%) |
Frame: 1 |
| | Symbol: None | expressed protein, similar to expressed protein [Arabidopsis thaliana] (TAIR:At5g03480.1); contains ... |
| Match: At5G03480.1 |
score: 51.2 |
e-value: 5e-07 |
Identity: 36.71% |
Span: 237bp (36.9%) |
Frame: 1 |
| | Symbol: None | expressed protein, ; expression supported by MPSS | chr5:869207-870854 REVERSE | Aliases: F12E4.250,... |
| Match: At1G73490.1 |
score: 50.8 |
e-value: 6e-07 |
Identity: 34.15% |
Span: 243bp (37.8%) |
Frame: 1 |
| | Symbol: None | RNA recognition motif (RRM)-containing protein, contains INTERPRO:IPR000504 RNA-binding region RNP-1... |
| Match: At1G72800.1 |
score: 50.1 |
e-value: 1e-06 |
Identity: 37.65% |
Span: 252bp (39.2%) |
Frame: 1 |
| | Symbol: None | nuM1-related, contains similarity with nuM1 GI:1279563 from (Medicago sativa) | chr1:27400878-274021... |
| Match: At5G51730.1 |
score: 50.1 |
e-value: 1e-06 |
Identity: 35.8% |
Span: 240bp (37.3%) |
Frame: 1 |
| | Symbol: None | expressed protein | chr5:21028644-21030883 FORWARD | Aliases: MIO24.15, MIO24_15 |
| Match: At5G65260.1 |
score: 47.8 |
e-value: 5e-06 |
Identity: 37.1% |
Span: 186bp (28.9%) |
Frame: 1 |
| polyadenylate-binding protein family protein / PABP family protein | chr5:26097727-26100210 REVERSE |
| Match: At4G08750.1 |
score: 47.4 |
e-value: 7e-06 |
Identity: 38.75% |
Span: 234bp (36.4%) |
Frame: 1 |
| | Symbol: None | RNA recognition motif (RRM)-containing protein, contains Pfam domain PF00076: RNA recognition motif.... |
| Match: At5G03500.1 |
score: 46.6 |
e-value: 1e-05 |
Identity: 36.84% |
Span: 225bp (35.0%) |
Frame: 1 |
| transcription coactivator | chr5:876672-877659 REVERSE |
| Match: At3G09160.1 |
score: 45.4 |
e-value: 3e-05 |
Identity: 35.37% |
Span: 243bp (37.8%) |
Frame: 1 |
| | Symbol: None | RNA recognition motif (RRM)-containing protein, contains Pfam profile: PF00076 RNA recognition motif... |
| Match: At5G51120.1 |
score: 43.5 |
e-value: 0.0001 |
Identity: 37.93% |
Span: 174bp (27.1%) |
Frame: 1 |
| Symbols: PABN1, ATPABN1 | ATPABN1/PABN1 (polyadenylate-binding protein 1); RNA binding | chr5:20796986-20798467 FORWARD |
|
| 23 lower scoring hits censored -- only 13 best hits are stored. |
| genbank/nr [blastx] | Showing best 20 hits recorded |
| Match: gi|21700195|dbj|BAC02896.1| |
score: 175 |
e-value: 1e-42 |
Identity: 73.72% |
Span: 444bp (69.1%) |
Frame: 1 |
| tobacco nucleolin [Nicotiana tabacum] |
| Match: gi|388258|emb|CAA39224.1| |
score: 95.9 |
e-value: 1e-18 |
Identity: 100% |
Span: 138bp (21.5%) |
Frame: 1 |
| glycine-rich protein [Solanum lycopersicum] |
| Match: gi|940288|gb|AAA74208.1| |
score: 93.6 |
e-value: 6e-18 |
Identity: 52.33% |
Span: 255bp (39.7%) |
Frame: 1 |
| protein localized in the nucleoli of pea nuclei; ORF; putative [Pisum sativum] |
| Match: gi|50928791|ref|XP_473923.1| |
score: 90.5 |
e-value: 5e-17 |
Identity: 56.47% |
Span: 252bp (39.2%) |
Frame: 1 |
| gi|50928791|ref|XP_473923.1| OSJNBa0058K23.21 [Oryza sativa (japonica cultivar-group)] >gi|38344339|emb|CAD41755.2| O... |
| Match: gi|50941929|ref|XP_480492.1| |
score: 84 |
e-value: 4e-15 |
Identity: 53.01% |
Span: 246bp (38.3%) |
Frame: 1 |
| putative |
| Match: gi|1279563|emb|CAA61298.1| |
score: 83.6 |
e-value: 6e-15 |
Identity: 51.72% |
Span: 255bp (39.7%) |
Frame: 1 |
| nuM1 [Medicago sativa] |
| Match: gi|15222009|ref|NP_175322.1| |
score: 80.1 |
e-value: 6e-14 |
Identity: 45.91% |
Span: 432bp (67.2%) |
Frame: 1 |
| ATNUC-L1; nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi11094815|gb|AAG29744.1|AC084414_12 nuM1... |
| Match: gi|15229678|ref|NP_188491.1| |
score: 76.6 |
e-value: 7e-13 |
Identity: 40.7% |
Span: 255bp (39.7%) |
Frame: 1 |
| ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi9180... |
| Match: gi|9294322|dbj|BAB02219.1| |
score: 76.6 |
e-value: 7e-13 |
Identity: 40.7% |
Span: 255bp (39.7%) |
Frame: 1 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|7770338|gb|AAF69708.1| |
score: 75.9 |
e-value: 1e-12 |
Identity: 49.4% |
Span: 243bp (37.8%) |
Frame: 1 |
| gi|7770338|gb|AAF69708.1| F27J15.29 [Arabidopsis thaliana] |
| Match: gi|15242768|ref|NP_195968.1| |
score: 52.8 |
e-value: 1e-05 |
Identity: 36.14% |
Span: 246bp (38.3%) |
Frame: 1 |
| gi|15242768|ref|NP_195968.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|11357375|pir||T... |
| Match: gi|52354551|gb|AAU44596.1| |
score: 51.2 |
e-value: 3e-05 |
Identity: 37.97% |
Span: 231bp (35.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|15242768|ref|NP_195968.1| |
score: 51.2 |
e-value: 3e-05 |
Identity: 36.71% |
Span: 237bp (36.9%) |
Frame: 1 |
| gi|15242768|ref|NP_195968.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|11357375|pir||T... |
| Match: gi|79537384|ref|NP_200181.2| |
score: 51.2 |
e-value: 3e-05 |
Identity: 37.97% |
Span: 231bp (35.9%) |
Frame: 1 |
| unknown |
| Match: gi|52354549|gb|AAU44595.1| |
score: 51.2 |
e-value: 3e-05 |
Identity: 37.97% |
Span: 231bp (35.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|9759064|dbj|BAB09542.1| |
score: 51.2 |
e-value: 3e-05 |
Identity: 37.97% |
Span: 231bp (35.9%) |
Frame: 1 |
| unnamed |
| Match: gi|15219480|ref|NP_177491.1| |
score: 50.8 |
e-value: 4e-05 |
Identity: 34.15% |
Span: 243bp (37.8%) |
Frame: 1 |
| gi|15219480|ref|NP_177491.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|25406272|pir||F... |
| Match: gi|51971333|dbj|BAD44331.1| |
score: 50.4 |
e-value: 5e-05 |
Identity: 37.8% |
Span: 243bp (37.8%) |
Frame: 1 |
| putative |
| Match: gi|18410189|ref|NP_565046.1| |
score: 50.1 |
e-value: 7e-05 |
Identity: 37.65% |
Span: 252bp (39.2%) |
Frame: 1 |
| gi|18410189|ref|NP_565046.1| nuM1-related protein [Arabidopsis thaliana] gi|25406212|pir||H96752 hypothetical protein... |
| Match: gi|15242166|ref|NP_199986.1| |
score: 50.1 |
e-value: 7e-05 |
Identity: 35.8% |
Span: 240bp (37.3%) |
Frame: 1 |
| gi|15242166|ref|NP_199986.1| hypothetical protein [Arabidopsis thaliana] gi|10177872|dbj|BAB11242.1| gb|AAF69708.1~ge... |
|
| 99 lower scoring hits censored -- only 20 best hits are stored. |
