| arabidopsis/peptide [blastx] | Showing best 6 hits recorded |
| Match: At4G31985.1 |
score: 97.8 |
e-value: 5e-21 |
Identity: 91.49% |
Span: 141bp (21.6%) |
Frame: 1 |
| 60S ribosomal protein L39 (RPL39C) | chr4:15469937-15470372 FORWARD |
| Match: At3G02190.1 |
score: 94 |
e-value: 7e-20 |
Identity: 89.36% |
Span: 141bp (21.6%) |
Frame: 1 |
| 60S ribosomal protein L39 (RPL39B) | chr3:406012-406349 REVERSE |
| Match: At2G25210.1 |
score: 82.8 |
e-value: 2e-16 |
Identity: 90% |
Span: 120bp (18.4%) |
Frame: 1 |
| 60S ribosomal protein L39 (RPL39A) | chr2:10747236-10747458 FORWARD |
| Match: At3G52640.1 |
score: 70.1 |
e-value: 1e-12 |
Identity: 60% |
Span: 150bp (23.0%) |
Frame: -2 |
| nicastrin-related | chr3:19526056-19531268 REVERSE |
| Match: At3G52640.2 |
score: 70.1 |
e-value: 1e-12 |
Identity: 60% |
Span: 150bp (23.0%) |
Frame: -2 |
| nicastrin-related | chr3:19526056-19531268 REVERSE |
| Match: At3G52640.3 |
score: 70.1 |
e-value: 1e-12 |
Identity: 60% |
Span: 150bp (23.0%) |
Frame: -2 |
| nicastrin-related | chr3:19526603-19531268 REVERSE |
|
| genbank/nr [blastx] | Showing best 67 hits recorded |
| Match: gi|50915614|ref|XP_468271.1| |
score: 102 |
e-value: 1e-20 |
Identity: 83.93% |
Span: 168bp (25.8%) |
Frame: 1 |
| gi|50915614|ref|XP_468271.1| putative 60S ribosomal protein L39 [Oryza sativa (japonica cultivar-group)] >gi|47497035... |
| Match: gi|57471714|gb|AAW50988.1| |
score: 99.4 |
e-value: 1e-19 |
Identity: 93.62% |
Span: 141bp (21.6%) |
Frame: 1 |
| ribosomal protein L39 [Triticum aestivum] |
| Match: gi|55773789|dbj|BAD72572.1| |
score: 99.4 |
e-value: 1e-19 |
Identity: 93.62% |
Span: 141bp (21.6%) |
Frame: 1 |
| gi|55773789|dbj|BAD72572.1| 60S ribosomal protein L39 [Oryza sativa (japonica cultivar-group)] >gi|55771364|dbj|BAD72... |
| Match: gi|50915618|ref|XP_468273.1| |
score: 99 |
e-value: 1e-19 |
Identity: 93.62% |
Span: 141bp (21.6%) |
Frame: 1 |
| gi|50915618|ref|XP_468273.1| 60S RIBOSOMAL PROTEIN L39 [Oryza sativa (japonica cultivar-group)] >gi|47497037|dbj|BAD1... |
| Match: gi|18417922|ref|NP_567886.1| |
score: 97.8 |
e-value: 3e-19 |
Identity: 91.49% |
Span: 141bp (21.6%) |
Frame: 1 |
| 60S ribosomal protein L39 (RPL39C) [Arabidopsis thaliana] >gi21431843|sp|P51424.2|RL391_ARATH RecName: Full=60S ribos... |
| Match: gi|18396099|ref|NP_566167.1| |
score: 94 |
e-value: 4e-18 |
Identity: 89.36% |
Span: 141bp (21.6%) |
Frame: 1 |
| 60S ribosomal protein L39 (RPL39B) [Arabidopsis thaliana] >gi75245803|sp|Q8L8W6.1|RL392_ARATH RecName: Full=60S ribos... |
| Match: gi|88183639|gb|EAQ91107.1| |
score: 87.8 |
e-value: 3e-16 |
Identity: 80.85% |
Span: 141bp (21.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|24266968|gb|AAN52382.1| |
score: 87.8 |
e-value: 3e-16 |
Identity: 80.85% |
Span: 141bp (21.6%) |
Frame: 1 |
| ribosomal protein L39 [Branchiostoma belcheri] >gi28200293|gb|AAO31778.1| ribosomal protein L39 [Branchiostoma belche... |
| Match: gi|72073922|ref|XP_790734.1| |
score: 87.4 |
e-value: 4e-16 |
Identity: 78.72% |
Span: 141bp (21.6%) |
Frame: 1 |
| PREDICTED: similar to structural constituent of ribosome [Strongylocentrotus purpuratus] >gi115925092|ref|XP_00117619... |
| Match: gi|110764011|ref|XP_001120867.1| |
score: 86.3 |
e-value: 9e-16 |
Identity: 78.72% |
Span: 141bp (21.6%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|62083457|gb|AAX62453.1| |
score: 85.9 |
e-value: 1e-15 |
Identity: 78.72% |
Span: 141bp (21.6%) |
Frame: 1 |
| ribosomal protein L39 isoform A [Lysiphlebus testaceipes] |
| Match: gi|62083425|gb|AAX62437.1| |
score: 85.9 |
e-value: 1e-15 |
Identity: 78.72% |
Span: 141bp (21.6%) |
Frame: 1 |
| ribosomal protein L39 isoform B [Lysiphlebus testaceipes] |
| Match: gi|66270189|gb|AAY43424.1| |
score: 85.9 |
e-value: 1e-15 |
Identity: 78.72% |
Span: 141bp (21.6%) |
Frame: 1 |
| ribosomal |
| Match: gi|67084113|gb|AAY66991.1| |
score: 85.5 |
e-value: 2e-15 |
Identity: 80.85% |
Span: 141bp (21.6%) |
Frame: 1 |
| gi|67084113|gb|AAY66991.1| ribosomal protein L39 [Ixodes scapularis] |
| Match: gi|94468726|gb|ABF18212.1| |
score: 85.5 |
e-value: 2e-15 |
Identity: 80.85% |
Span: 141bp (21.6%) |
Frame: 1 |
| 60S |
| Match: gi|55234875|gb|EAA00736.3| |
score: 85.1 |
e-value: 2e-15 |
Identity: 84.44% |
Span: 135bp (20.7%) |
Frame: 1 |
| gi|55234875|gb|EAA00736.3| ENSANGP00000020220 [Anopheles gambiae str. PEST] >gi|58394407|ref|XP_320713.2| ENSANGP0000... |
| Match: gi|14326102|gb|AAK60140.1| |
score: 84.7 |
e-value: 3e-15 |
Identity: 78.72% |
Span: 141bp (21.6%) |
Frame: 1 |
| gi|14326102|gb|AAK60140.1| ribosomal protein L39 [Candida albicans] |
| Match: gi|90301089|gb|EAS30720.1| |
score: 84 |
e-value: 5e-15 |
Identity: 78.72% |
Span: 141bp (21.6%) |
Frame: 1 |
| predicted |
| Match: gi|111062358|gb|EAT83478.1| |
score: 83.6 |
e-value: 6e-15 |
Identity: 76.6% |
Span: 141bp (21.6%) |
Frame: 1 |
| RL39_CANAL |
| Match: gi|3426130|emb|CAA20364.1| |
score: 82.8 |
e-value: 1e-14 |
Identity: 76.6% |
Span: 141bp (21.6%) |
Frame: 1 |
| gi|3426130|emb|CAA20364.1| SPCC663.04 [Schizosaccharomyces pombe] >gi|19075766|ref|NP_588266.1| hypothetical protein ... |
| Match: gi|49657883|emb|CAG90707.1| |
score: 82.8 |
e-value: 1e-14 |
Identity: 76.6% |
Span: 141bp (21.6%) |
Frame: 1 |
| gi|49657883|emb|CAG90707.1| unnamed protein product [Debaryomyces hansenii CBS767] >gi|50427201|ref|XP_462213.1| unna... |
| Match: gi|15224691|ref|NP_180093.1| |
score: 82.8 |
e-value: 1e-14 |
Identity: 90% |
Span: 120bp (18.4%) |
Frame: 1 |
| gi|15224691|ref|NP_180093.1| 60S ribosomal protein L39 (RPL39A) [Arabidopsis thaliana] gi|25295107|pir||F84645 60S ri... |
| Match: gi|56566264|gb|AAN75187.2| |
score: 82.8 |
e-value: 1e-14 |
Identity: 72.34% |
Span: 141bp (21.6%) |
Frame: 1 |
| RPL39 |
| Match: gi|62087734|dbj|BAD92314.1| |
score: 82.4 |
e-value: 1e-14 |
Identity: 70.59% |
Span: 153bp (23.5%) |
Frame: 1 |
| gi|62087734|dbj|BAD92314.1| ribosomal protein L39 variant [Homo sapiens] |
| Match: gi|46125087|ref|XP_387097.1| |
score: 82 |
e-value: 2e-14 |
Identity: 77.78% |
Span: 135bp (20.7%) |
Frame: 1 |
| gi|46125087|ref|XP_387097.1| hypothetical protein FG06921.1 [Gibberella zeae PH-1] >gi|42554125|gb|EAA76968.1| hypoth... |
| Match: gi|61372022|gb|AAX43773.1| |
score: 82 |
e-value: 2e-14 |
Identity: 76.6% |
Span: 141bp (21.6%) |
Frame: 1 |
| gi|61372022|gb|AAX43773.1| ribosomal protein L39 [synthetic construct] |
| Match: gi|48734891|gb|AAH72550.1| |
score: 82 |
e-value: 2e-14 |
Identity: 76.6% |
Span: 141bp (21.6%) |
Frame: 1 |
| gi|48734891|gb|AAH72550.1| Zgc:92371 [Danio rerio] >gi|50344810|ref|NP_001002078.1| hypothetical protein LOC415168 [D... |
| Match: gi|12381881|dbj|BAB21250.1| |
score: 82 |
e-value: 2e-14 |
Identity: 76.6% |
Span: 141bp (21.6%) |
Frame: 1 |
| ribosomal |
| Match: gi|63101523|gb|AAH94645.1| |
score: 82 |
e-value: 2e-14 |
Identity: 76.6% |
Span: 141bp (21.6%) |
Frame: 1 |
| Ribosomal |
| Match: gi|38048713|gb|AAR10259.1| |
score: 81.6 |
e-value: 2e-14 |
Identity: 74.47% |
Span: 141bp (21.6%) |
Frame: 1 |
| similar |
| Match: gi|14585747|gb|AAK67460.1| |
score: 81.3 |
e-value: 3e-14 |
Identity: 80% |
Span: 135bp (20.7%) |
Frame: 1 |
| gi|14585747|gb|AAK67460.1| ribosomal protein L39 [Culex pipiens pallens] |
| Match: gi|50258687|gb|EAL21372.1| |
score: 81.3 |
e-value: 3e-14 |
Identity: 67.31% |
Span: 156bp (23.9%) |
Frame: 1 |
| gi|50258687|gb|EAL21372.1| hypothetical protein CNBD0680 [Cryptococcus neoformans var. neoformans B-3501A] |
| Match: gi|46403024|gb|AAS92521.1| |
score: 80.9 |
e-value: 4e-14 |
Identity: 71.74% |
Span: 138bp (21.2%) |
Frame: 1 |
| gi|46403024|gb|AAS92521.1| RPL39; hypothetical protein [Cryptococcus bacillisporus] |
| Match: gi|109132071|ref|XP_001083304.1| |
score: 80.5 |
e-value: 5e-14 |
Identity: 77.78% |
Span: 135bp (20.7%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|54636064|gb|EAL25467.1| |
score: 80.1 |
e-value: 7e-14 |
Identity: 75.56% |
Span: 135bp (20.7%) |
Frame: 1 |
| gi|54636064|gb|EAL25467.1| GA17833-PA [Drosophila pseudoobscura] |
| Match: gi|2307014|gb|AAB65802.1| |
score: 79.3 |
e-value: 1e-13 |
Identity: 72.34% |
Span: 141bp (21.6%) |
Frame: 1 |
| gi|2307014|gb|AAB65802.1| ribosomal protein 46 [Drosophila melanogaster] |
| Match: gi|6041798|gb|AAF02118.1| |
score: 79 |
e-value: 1e-13 |
Identity: 87.5% |
Span: 120bp (18.4%) |
Frame: 1 |
| gi|6041798|gb|AAF02118.1| putative ribosomal protein L39 [Arabidopsis thaliana] |
| Match: gi|7568156|gb|AAB24901.2| |
score: 78.2 |
e-value: 3e-13 |
Identity: 70.21% |
Span: 141bp (21.6%) |
Frame: 1 |
| gi|7568156|gb|AAB24901.2| L46 [Kluyveromyces marxianus] >gi|1350751|sp|P48536|RL39_KLUMA 60S ribosomal protein L39 (L... |
| Match: gi|112180679|gb|AAH23885.1| |
score: 78.2 |
e-value: 3e-13 |
Identity: 72.34% |
Span: 141bp (21.6%) |
Frame: 1 |
| RIKEN |
| Match: gi|6322272|ref|NP_012346.1| |
score: 77.8 |
e-value: 3e-13 |
Identity: 70.21% |
Span: 141bp (21.6%) |
Frame: 1 |
| gi|6322272|ref|NP_012346.1| Homology to rat L39; Rpl39p [Saccharomyces cerevisiae] gi|132975|sp|P04650|RL39_YEAST 60S... |
| Match: gi|109810212|gb|ABG46421.1| |
score: 77.8 |
e-value: 3e-13 |
Identity: 72.34% |
Span: 141bp (21.6%) |
Frame: 1 |
| ribosomal |
| Match: gi|44983399|gb|AAS52535.1| |
score: 77.4 |
e-value: 4e-13 |
Identity: 70.21% |
Span: 141bp (21.6%) |
Frame: 1 |
| gi|44983399|gb|AAS52535.1| AEL150Wp [Ashbya gossypii ATCC 10895] >gi|45190457|ref|NP_984711.1| AEL150Wp [Eremothecium... |
| Match: gi|1255380|gb|AAB37070.1| |
score: 76.3 |
e-value: 1e-12 |
Identity: 68.09% |
Span: 141bp (21.6%) |
Frame: 1 |
| gi|1255380|gb|AAB37070.1| Ribosomal protein, large subunit protein 39 [Caenorhabditis elegans] >gi|17563240|ref|NP_50... |
| Match: gi|15147382|gb|AAH12328.1| |
score: 76.3 |
e-value: 1e-12 |
Identity: 70.21% |
Span: 141bp (21.6%) |
Frame: 1 |
| Ribosomal |
| Match: gi|89042612|ref|XP_946035.1| |
score: 76.3 |
e-value: 1e-12 |
Identity: 70.21% |
Span: 141bp (21.6%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|50303841|ref|XP_451867.1| |
score: 75.5 |
e-value: 2e-12 |
Identity: 68.09% |
Span: 141bp (21.6%) |
Frame: 1 |
| gi|50303841|ref|XP_451867.1| unnamed protein product [Kluyveromyces lactis] >gi|49640999|emb|CAH02260.1| unnamed prot... |
| Match: gi|88983900|ref|XP_932718.1| |
score: 75.1 |
e-value: 2e-12 |
Identity: 71.11% |
Span: 135bp (20.7%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|55664142|ref|XP_521236.1| |
score: 74.7 |
e-value: 3e-12 |
Identity: 73.33% |
Span: 135bp (20.7%) |
Frame: 1 |
| gi|55664142|ref|XP_521236.1| PREDICTED: similar to ribosomal protein L39 [Pan troglodytes] |
| Match: gi|62176627|gb|AAX70731.1| |
score: 71.6 |
e-value: 2e-11 |
Identity: 65.96% |
Span: 141bp (21.6%) |
Frame: 1 |
| gi|62176627|gb|AAX70731.1| 60S ribosomal protein L39, putative [Trypanosoma brucei] >gi|70803386|gb|AAZ13290.1| 60S r... |
| Match: gi|71660825|ref|XP_822122.1| |
score: 71.2 |
e-value: 3e-11 |
Identity: 63.83% |
Span: 141bp (21.6%) |
Frame: 1 |
| gi|71660825|ref|XP_822122.1| 60S ribosomal protein L39, putative [Trypanosoma cruzi] >gi|70887515|gb|EAO00271.1| 60S ... |
| Match: gi|68125650|emb|CAJ03922.1| |
score: 70.1 |
e-value: 7e-11 |
Identity: 61.7% |
Span: 141bp (21.6%) |
Frame: 1 |
| gi|68125650|emb|CAJ03922.1| 60S ribosomal protein L39, putative [Leishmania major] >gi|70799778|gb|AAZ09694.1| 60S ri... |
| Match: gi|42565868|ref|NP_190832.3| |
score: 70.1 |
e-value: 7e-11 |
Identity: 60% |
Span: 150bp (23.0%) |
Frame: -2 |
| nicastrin-related [Arabidopsis thaliana] >gi37081112|sp|Q8GUM5.1|NICA_ARATH RecName: Full=Nicastrin; Flags: Precursor... |
| Match: gi|79314831|ref|NP_001030848.1| |
score: 70.1 |
e-value: 7e-11 |
Identity: 60% |
Span: 150bp (23.0%) |
Frame: -2 |
| nicastrin-related [Arabidopsis thaliana] |
| Match: gi|42572647|ref|NP_974419.1| |
score: 70.1 |
e-value: 7e-11 |
Identity: 60% |
Span: 150bp (23.0%) |
Frame: -2 |
| nicastrin-related [Arabidopsis thaliana] |
| Match: gi|66356450|ref|XP_625403.1| |
score: 69.3 |
e-value: 1e-10 |
Identity: 56.25% |
Span: 144bp (22.1%) |
Frame: 1 |
| gi|66356450|ref|XP_625403.1| 60S ribosomal protein L39 [Cryptosporidium parvum] >gi|46226390|gb|EAK87395.1| 60S ribos... |
| Match: gi|71030414|ref|XP_764849.1| |
score: 67.8 |
e-value: 3e-10 |
Identity: 62.22% |
Span: 135bp (20.7%) |
Frame: 1 |
| 60S |
| Match: gi|85091676|ref|XP_959018.1| |
score: 65.9 |
e-value: 1e-09 |
Identity: 75.68% |
Span: 111bp (17.0%) |
Frame: 1 |
| hypothetical |
| Match: gi|67473198|ref|XP_652366.1| |
score: 64.3 |
e-value: 4e-09 |
Identity: 60.87% |
Span: 138bp (21.2%) |
Frame: 1 |
| 60S |
| Match: gi|89305695|gb|EAS03683.1| |
score: 59.7 |
e-value: 9e-08 |
Identity: 51.11% |
Span: 135bp (20.7%) |
Frame: 1 |
| Ribosomal |
| Match: gi|109132073|ref|XP_001082692.1| |
score: 56.2 |
e-value: 1e-06 |
Identity: 73.53% |
Span: 102bp (15.6%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|109019971|ref|XP_001103824.1| |
score: 55.5 |
e-value: 2e-06 |
Identity: 62.5% |
Span: 120bp (18.4%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|47226207|emb|CAG08354.1| |
score: 54.3 |
e-value: 4e-06 |
Identity: 72.73% |
Span: 99bp (15.2%) |
Frame: 1 |
| gi|47226207|emb|CAG08354.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|43600|emb|CAA38750.1| |
score: 50.8 |
e-value: 4e-05 |
Identity: 50% |
Span: 126bp (19.3%) |
Frame: 1 |
| ribosomal |
| Match: gi|73950507|ref|XP_544459.2| |
score: 50.4 |
e-value: 6e-05 |
Identity: 68.75% |
Span: 96bp (14.7%) |
Frame: 1 |
| gi|73950507|ref|XP_544459.2| PREDICTED: similar to phosphatase and actin regulator 4 [Canis familiaris] |
| Match: gi|10581866|gb|AAG20542.1| |
score: 50.1 |
e-value: 7e-05 |
Identity: 50% |
Span: 126bp (19.3%) |
Frame: 1 |
| 50S |
| Match: gi|57641254|ref|YP_183732.1| |
score: 49.7 |
e-value: 0.0001 |
Identity: 44.68% |
Span: 141bp (21.6%) |
Frame: 1 |
| gi|57641254|ref|YP_183732.1| LSU ribosomal protein L39E [Thermococcus kodakarensis KOD1] >gi|57159578|dbj|BAD85508.1|... |
| Match: gi|14591742|ref|NP_142498.1| |
score: 49.3 |
e-value: 0.0001 |
Identity: 44.68% |
Span: 141bp (21.6%) |
Frame: 1 |
| gi|14591742|ref|NP_142498.1| Ribosomal protein L39E [Pyrococcus horikoshii] gi|29427648|sp|P59473|RL39_PYRHO 50S ribo... |
|
| 34 lower scoring hits censored -- only 67 best hits are stored. |
