| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|270257512|emb|CBI39555.1| |
score: 344 |
e-value: 5e-93 |
Identity: 86.26% |
Span: 630bp (95.9%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225450673|ref|XP_002283131.1| |
score: 344 |
e-value: 5e-93 |
Identity: 86.26% |
Span: 630bp (95.9%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|147863592|emb|CAN79776.1| |
score: 344 |
e-value: 5e-93 |
Identity: 86.26% |
Span: 630bp (95.9%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|255642457|gb|ACU21492.1| |
score: 340 |
e-value: 5e-92 |
Identity: 87.5% |
Span: 552bp (84.0%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|224125088|ref|XP_002319497.1| |
score: 340 |
e-value: 9e-92 |
Identity: 88.04% |
Span: 552bp (84.0%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222857873|gb|EEE95420.1| predicted protein [Populus trichocarpa] |
| Match: gi|124359153|gb|ABN05680.1| |
score: 339 |
e-value: 1e-91 |
Identity: 87.5% |
Span: 552bp (84.0%) |
Frame: 3 |
| PRP38 [Medicago truncatula] |
| Match: gi|18405463|ref|NP_565937.1| |
score: 337 |
e-value: 7e-91 |
Identity: 80% |
Span: 630bp (95.9%) |
Frame: 3 |
| pre-mRNA splicing factor PRP38 family protein [Arabidopsis thaliana] >gi21593015|gb|AAM64964.1| unknown [Arabidopsis ... |
| Match: gi|110737436|dbj|BAF00662.1| |
score: 335 |
e-value: 2e-90 |
Identity: 80% |
Span: 630bp (95.9%) |
Frame: 3 |
| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|242048560|ref|XP_002462026.1| |
score: 332 |
e-value: 2e-89 |
Identity: 84.78% |
Span: 552bp (84.0%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_02g012970 [Sorghum bicolor] >gi241925403|gb|EER98547.1| hypothetical protein SORBIDRA... |
| Match: gi|226528208|ref|NP_001151258.1| |
score: 331 |
e-value: 4e-89 |
Identity: 84.24% |
Span: 552bp (84.0%) |
Frame: 3 |
| LOC100284891 [Zea mays] >gi195645370|gb|ACG42153.1| pre-mRNA processing factor [Zea mays] >gi|238009214|gb|ACR35642.1... |
| Match: gi|218201640|gb|EEC84067.1| |
score: 327 |
e-value: 8e-88 |
Identity: 83.15% |
Span: 552bp (84.0%) |
Frame: 3 |
| hypothetical protein OsI_30348 [Oryza sativa Indica Group] |
| Match: gi|115477924|ref|NP_001062557.1| |
score: 327 |
e-value: 8e-88 |
Identity: 83.15% |
Span: 552bp (84.0%) |
Frame: 3 |
| Os09g0103600 [Oryza sativa (japonica cultivar-group)] >gi50725213|dbj|BAD34147.1| pre-mRNA splicing factor PRP38 prot... |
| Match: gi|148906831|gb|ABR16561.1| |
score: 325 |
e-value: 2e-87 |
Identity: 83.15% |
Span: 552bp (84.0%) |
Frame: 3 |
| unknown [Picea sitchensis] |
| Match: gi|68035301|gb|AAY84870.1| |
score: 313 |
e-value: 9e-84 |
Identity: 79.89% |
Span: 552bp (84.0%) |
Frame: 3 |
| pre-mRNA processing factor [Triticum aestivum] |
| Match: gi|168009634|ref|XP_001757510.1| |
score: 313 |
e-value: 7e-84 |
Identity: 76.89% |
Span: 630bp (95.9%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162691204|gb|EDQ77567.1| predicted protein [Physcomitrella... |
| Match: gi|222641042|gb|EEE69174.1| |
score: 306 |
e-value: 1e-81 |
Identity: 83.53% |
Span: 510bp (77.6%) |
Frame: 3 |
| hypothetical protein OsJ_28344 [Oryza sativa Japonica Group] |
| Match: gi|156546371|ref|XP_001606816.1| |
score: 274 |
e-value: 5e-72 |
Identity: 70.65% |
Span: 552bp (84.0%) |
Frame: 3 |
| PREDICTED: similar to ENSANGP00000012048 [Nasonia vitripennis] |
| Match: gi|196018405|ref|XP_002118797.1| |
score: 273 |
e-value: 8e-72 |
Identity: 69.57% |
Span: 552bp (84.0%) |
Frame: 3 |
| hypothetical protein TRIADDRAFT_34760 [Trichoplax adhaerens] >gi190578187|gb|EDV18717.1| hypothetical protein TRIADDR... |
| Match: gi|196010844|ref|XP_002115286.1| |
score: 273 |
e-value: 8e-72 |
Identity: 69.57% |
Span: 552bp (84.0%) |
Frame: 3 |
| hypothetical protein TRIADDRAFT_59315 [Trichoplax adhaerens] >gi190582057|gb|EDV22131.1| hypothetical protein TRIADDR... |
| Match: gi|157105718|ref|XP_001648995.1| |
score: 268 |
e-value: 3e-70 |
Identity: 69.02% |
Span: 552bp (84.0%) |
Frame: 3 |
| hypothetical protein AaeL_AAEL004355 [Aedes aegypti] >gi108880026|gb|EAT44251.1| conserved hypothetical protein [Aede... |
| Match: gi|118094560|ref|XP_001234245.1| |
score: 267 |
e-value: 6e-70 |
Identity: 67.93% |
Span: 552bp (84.0%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Gallus gallus] |
| Match: gi|157821071|ref|NP_001100142.1| |
score: 267 |
e-value: 7e-70 |
Identity: 67.93% |
Span: 552bp (84.0%) |
Frame: 3 |
| PRP38 pre-mRNA processing factor 38 (yeast) domain containing A [Rattus norvegicus] >gi149035720|gb|EDL90401.1| PRP38... |
| Match: gi|281353553|gb|EFB29137.1| |
score: 266 |
e-value: 9e-70 |
Identity: 67.93% |
Span: 552bp (84.0%) |
Frame: 3 |
| hypothetical protein PANDA_003790 [Ailuropoda melanoleuca] |
| Match: gi|126305650|ref|XP_001362109.1| |
score: 266 |
e-value: 9e-70 |
Identity: 67.93% |
Span: 552bp (84.0%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Monodelphis domestica] |
| Match: gi|222641042|gb|EEE69174.1| |
score: 144 |
e-value: 5e-33 |
Identity: 75% |
Span: 264bp (40.2%) |
Frame: 3 |
| hypothetical protein OsJ_28344 [Oryza sativa Japonica Group] |
|
| 144 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 1 hits recorded |
| Match: At2G40650.1 |
score: 337 |
e-value: 5e-93 |
Identity: 80% |
Span: 630bp (95.9%) |
Frame: 3 |
| pre-mRNA splicing factor PRP38 family protein | chr2:16970666-16972674 REVERSE |
|
| swissprot [blastx] | Showing best 9 hits recorded |
| Match: Q5RDD2 |
score: 266 |
e-value: 6e-71 |
Identity: 67.93% |
Span: 552bp (84.0%) |
Frame: 3 |
| Pre-mRNA-splicing factor 38A OS=Pongo abelii GN=PRPF38A PE=2 SV=1 |
| Match: Q8HXH6 |
score: 266 |
e-value: 6e-71 |
Identity: 67.93% |
Span: 552bp (84.0%) |
Frame: 3 |
| Pre-mRNA-splicing factor 38A OS=Macaca fascicularis GN=PRPF38A PE=2 SV=1 |
| Match: Q8NAV1 |
score: 266 |
e-value: 6e-71 |
Identity: 67.93% |
Span: 552bp (84.0%) |
Frame: 3 |
| Pre-mRNA-splicing factor 38A OS=Homo sapiens GN=PRPF38A PE=1 SV=1 |
| Match: Q0P5I6 |
score: 266 |
e-value: 6e-71 |
Identity: 67.93% |
Span: 552bp (84.0%) |
Frame: 3 |
| Pre-mRNA-splicing factor 38A OS=Bos taurus GN=PRPF38A PE=2 SV=1 |
| Match: Q4FK66 |
score: 264 |
e-value: 4e-70 |
Identity: 67.39% |
Span: 552bp (84.0%) |
Frame: 3 |
| Pre-mRNA-splicing factor 38A OS=Mus musculus GN=Prpf38a PE=1 SV=1 |
| Match: Q4FZQ6 |
score: 262 |
e-value: 2e-69 |
Identity: 65.76% |
Span: 552bp (84.0%) |
Frame: 3 |
| Pre-mRNA-splicing factor 38A OS=Xenopus laevis GN=prpf38a PE=2 SV=1 |
| Match: Q6DHU4 |
score: 262 |
e-value: 2e-69 |
Identity: 65.76% |
Span: 552bp (84.0%) |
Frame: 3 |
| Pre-mRNA-splicing factor 38A OS=Danio rerio GN=prpf38a PE=2 SV=1 |
| Match: Q28H87 |
score: 261 |
e-value: 3e-69 |
Identity: 65.22% |
Span: 552bp (84.0%) |
Frame: 3 |
| Pre-mRNA-splicing factor 38A OS=Xenopus tropicalis GN=prpf38a PE=2 SV=1 |
| Match: Q9UUD2 |
score: 165 |
e-value: 2e-40 |
Identity: 47.31% |
Span: 501bp (76.3%) |
Frame: 3 |
| Pre-mRNA-splicing factor 38 OS=Schizosaccharomyces pombe GN=prp38 PE=2 SV=1 |
|
