| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|225424671|ref|XP_002262749.1| |
score: 244 |
e-value: 5e-63 |
Identity: 64.86% |
Span: 540bp (82.2%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270260312|emb|CBI32146.1| unnamed protein product [Vitis vinifera] |
| Match: gi|255568836|ref|XP_002525389.1| |
score: 224 |
e-value: 5e-57 |
Identity: 62.86% |
Span: 522bp (79.5%) |
Frame: 1 |
| catalytic, putative [Ricinus communis] >gi223535352|gb|EEF37027.1| catalytic, putative [Ricinus communis] |
| Match: gi|18406673|ref|NP_564755.1| |
score: 223 |
e-value: 1e-56 |
Identity: 75% |
Span: 408bp (62.1%) |
Frame: 1 |
| radical SAM domain-containing protein [Arabidopsis thaliana] >gi15451230|gb|AAK96886.1| Unknown protein [Arabidopsis ... |
| Match: gi|3249072|gb|AAC24056.1| |
score: 223 |
e-value: 1e-56 |
Identity: 75% |
Span: 408bp (62.1%) |
Frame: 1 |
| Contains similarity to hypothetical 43.1 KD protein in NDK-GCPE intergenic region gb493519 from E. coli sequence gb|U... |
| Match: gi|242058145|ref|XP_002458218.1| |
score: 213 |
e-value: 9e-54 |
Identity: 70.37% |
Span: 405bp (61.6%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_03g029230 [Sorghum bicolor] >gi241930193|gb|EES03338.1| hypothetical protein SORBIDRA... |
| Match: gi|194700820|gb|ACF84494.1| |
score: 211 |
e-value: 5e-53 |
Identity: 68.89% |
Span: 405bp (61.6%) |
Frame: 1 |
| unknown [Zea mays] |
| Match: gi|115438803|ref|NP_001043681.1| |
score: 210 |
e-value: 8e-53 |
Identity: 69.63% |
Span: 405bp (61.6%) |
Frame: 1 |
| Os01g0640800 [Oryza sativa (japonica cultivar-group)] >gi113533212|dbj|BAF05595.1| Os01g0640800 [Oryza sativa Japonic... |
| Match: gi|116787825|gb|ABK24655.1| |
score: 192 |
e-value: 2e-47 |
Identity: 64.23% |
Span: 411bp (62.6%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|224107843|ref|XP_002314621.1| |
score: 188 |
e-value: 4e-46 |
Identity: 65% |
Span: 363bp (55.3%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222863661|gb|EEF00792.1| predicted protein [Populus trichocarpa] |
| Match: gi|168015505|ref|XP_001760291.1| |
score: 155 |
e-value: 3e-36 |
Identity: 48.12% |
Span: 474bp (72.1%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162688671|gb|EDQ75047.1| predicted protein [Physcomitrella... |
| Match: gi|226463355|gb|EEH60633.1| |
score: 120 |
e-value: 1e-25 |
Identity: 40% |
Span: 492bp (74.9%) |
Frame: 1 |
| predicted protein [Micromonas pusilla CCMP1545] |
| Match: gi|253701168|ref|YP_003022357.1| |
score: 114 |
e-value: 1e-23 |
Identity: 46.27% |
Span: 402bp (61.2%) |
Frame: 1 |
| radical SAM enzyme, Cfr family [Geobacter sp. M21] >gi251776018|gb|ACT18599.1| radical SAM enzyme, Cfr family [Geobac... |
| Match: gi|197118042|ref|YP_002138469.1| |
score: 114 |
e-value: 1e-23 |
Identity: 46.27% |
Span: 402bp (61.2%) |
Frame: 1 |
| radical SAM enzyme, Cfr family [Geobacter bemidjiensis Bem] >gi197087402|gb|ACH38673.1| radical SAM enzyme, Cfr famil... |
| Match: gi|255060062|ref|ZP_05312203.1| |
score: 109 |
e-value: 2e-22 |
Identity: 44.78% |
Span: 402bp (61.2%) |
Frame: 1 |
| radical SAM enzyme, Cfr family [Geobacter sp. M18] >gi254984135|gb|EET35122.1| radical SAM enzyme, Cfr family [Geobac... |
| Match: gi|222056625|ref|YP_002538987.1| |
score: 107 |
e-value: 1e-21 |
Identity: 44.78% |
Span: 402bp (61.2%) |
Frame: 1 |
| radical SAM enzyme, Cfr family [Geobacter sp. FRC-32] >gi221565914|gb|ACM21886.1| radical SAM enzyme, Cfr family [Geo... |
| Match: gi|163784065|ref|ZP_02179018.1| |
score: 106 |
e-value: 2e-21 |
Identity: 42.96% |
Span: 402bp (61.2%) |
Frame: 1 |
| hypothetical protein HG1285_12252 [Hydrogenivirga sp. 128-5-R1-1] >gi159880664|gb|EDP74215.1| hypothetical protein HG... |
| Match: gi|225850129|ref|YP_002730363.1| |
score: 105 |
e-value: 3e-21 |
Identity: 40.3% |
Span: 399bp (60.7%) |
Frame: 1 |
| radical SAM enzyme, Cfr family [Persephonella marina EX-H1] >gi225644821|gb|ACO03007.1| radical SAM enzyme, Cfr famil... |
| Match: gi|116751471|ref|YP_848158.1| |
score: 105 |
e-value: 3e-21 |
Identity: 42.96% |
Span: 399bp (60.7%) |
Frame: 1 |
| radical SAM domain-containing protein [Syntrophobacter fumaroxidans MPOB] >gi205829911|sp|A0LQM1.1|RLMN_SYNFM RecName... |
| Match: gi|39996213|ref|NP_952164.1| |
score: 105 |
e-value: 3e-21 |
Identity: 43.38% |
Span: 408bp (62.1%) |
Frame: 1 |
| hypothetical protein GSU1111 [Geobacter sulfurreducens PCA] >gi81702805|sp|Q74E53.1|RLMN_GEOSL RecName: Full=Ribosoma... |
| Match: gi|148263644|ref|YP_001230350.1| |
score: 103 |
e-value: 1e-20 |
Identity: 43.28% |
Span: 402bp (61.2%) |
Frame: 1 |
| radical SAM protein [Geobacter uraniireducens Rf4] >gi205829769|sp|A5GEC2.1|RLMN_GEOUR RecName: Full=Ribosomal RNA la... |
| Match: gi|118578868|ref|YP_900118.1| |
score: 101 |
e-value: 5e-20 |
Identity: 43.28% |
Span: 402bp (61.2%) |
Frame: 1 |
| radical SAM protein [Pelobacter propionicus DSM 2379] >gi205829797|sp|A1AL40.1|RLMN_PELPD RecName: Full=Ribosomal RNA... |
| Match: gi|116060839|emb|CAL57317.1| |
score: 99.4 |
e-value: 3e-19 |
Identity: 36.69% |
Span: 486bp (74.0%) |
Frame: 1 |
| from E. coli sequence gbU02965. (ISS) [Ostreococcus tauri] |
| Match: gi|260584540|ref|ZP_05852286.1| |
score: 98.2 |
e-value: 6e-19 |
Identity: 39.85% |
Span: 399bp (60.7%) |
Frame: 1 |
| radical SAM enzyme, Cfr family [Granulicatella elegans ATCC 700633] >gi260157563|gb|EEW92633.1| radical SAM enzyme, C... |
| Match: gi|159483801|ref|XP_001699949.1| |
score: 98.2 |
e-value: 6e-19 |
Identity: 39.74% |
Span: 402bp (61.2%) |
Frame: 1 |
| hypothetical protein CHLREDRAFT_97359 [Chlamydomonas reinhardtii] >gi158281891|gb|EDP07645.1| predicted protein [Chla... |
| Match: gi|94264318|ref|ZP_01288111.1| |
score: 97.8 |
e-value: 8e-19 |
Identity: 40% |
Span: 414bp (63.0%) |
Frame: 1 |
| conserved hypothetical protein [delta proteobacterium MLMS-1] >gi93455284|gb|EAT05494.1| conserved hypothetical prote... |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 4 hits recorded |
| Match: At1G60230.1 |
score: 223 |
e-value: 8e-59 |
Identity: 75% |
Span: 408bp (62.1%) |
Frame: 1 |
| radical SAM domain-containing protein | chr1:22215888-22218011 REVERSE |
| Match: At3G19630.1 |
score: 76.6 |
e-value: 1e-14 |
Identity: 36.62% |
Span: 372bp (56.6%) |
Frame: 1 |
| radical SAM domain-containing protein | chr3:6818682-6820680 REVERSE |
| Match: At2G39670.1 |
score: 74.3 |
e-value: 6e-14 |
Identity: 39.16% |
Span: 408bp (62.1%) |
Frame: 1 |
| radical SAM domain-containing protein | chr2:16541381-16544064 FORWARD |
| Match: At2G39670.2 |
score: 72.8 |
e-value: 2e-13 |
Identity: 48.42% |
Span: 264bp (40.2%) |
Frame: 1 |
| radical SAM domain-containing protein | chr2:16541381-16544064 FORWARD |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: A0LQM1 |
score: 105 |
e-value: 2e-22 |
Identity: 42.96% |
Span: 399bp (60.7%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rlmN PE=... |
| Match: Q74E53 |
score: 105 |
e-value: 2e-22 |
Identity: 43.38% |
Span: 408bp (62.1%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Geobacter sulfurreducens GN=rlmN PE=3 SV=1 |
| Match: A5GEC2 |
score: 103 |
e-value: 9e-22 |
Identity: 43.28% |
Span: 402bp (61.2%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Geobacter uraniireducens (strain Rf4) GN=rlmN PE=3 SV=1 |
| Match: A1AL40 |
score: 101 |
e-value: 4e-21 |
Identity: 43.28% |
Span: 402bp (61.2%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Pelobacter propionicus (strain DSM 2379) GN=rlmN PE=3 SV=1 |
| Match: Q39S71 |
score: 97.8 |
e-value: 5e-20 |
Identity: 41.91% |
Span: 408bp (62.1%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) G... |
| Match: Q6ALW1 |
score: 96.3 |
e-value: 2e-19 |
Identity: 44.03% |
Span: 402bp (61.2%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Desulfotalea psychrophila GN=rlmN PE=3 SV=1 |
| Match: Q8CSW0 |
score: 94 |
e-value: 7e-19 |
Identity: 36.43% |
Span: 420bp (63.9%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Staphylococcus epidermidis (strain ATCC 12228) GN=rlmN PE=3 SV=1 |
| Match: Q5HPX3 |
score: 92.8 |
e-value: 2e-18 |
Identity: 37.4% |
Span: 393bp (59.8%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=rlmN PE=... |
| Match: Q30X35 |
score: 92.4 |
e-value: 2e-18 |
Identity: 37.31% |
Span: 399bp (60.7%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Desulfovibrio desulfuricans (strain G20) GN=rlmN PE=3 SV=1 |
| Match: Q6MPV7 |
score: 92.4 |
e-value: 2e-18 |
Identity: 36.96% |
Span: 414bp (63.0%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Bdellovibrio bacteriovorus GN=rlmN PE=3 SV=1 |
| Match: Q65JS3 |
score: 92 |
e-value: 3e-18 |
Identity: 37.04% |
Span: 405bp (61.6%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rlmN PE=3 SV=1 |
| Match: B9DPM7 |
score: 90.9 |
e-value: 6e-18 |
Identity: 37.4% |
Span: 393bp (59.8%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Staphylococcus carnosus (strain TM300) GN=rlmN PE=3 SV=1 |
| Match: B8DRU2 |
score: 90.1 |
e-value: 1e-17 |
Identity: 39.69% |
Span: 378bp (57.5%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=rlmN PE=... |
| Match: Q1DCU1 |
score: 90.1 |
e-value: 1e-17 |
Identity: 46.49% |
Span: 339bp (51.6%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N 1 OS=Myxococcus xanthus (strain DK 1622) GN=rlmN1 PE=3 SV=1 |
| Match: Q4L5R9 |
score: 89.7 |
e-value: 1e-17 |
Identity: 35.88% |
Span: 393bp (59.8%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rlmN PE=3 SV=1 |
| Match: A5WGQ4 |
score: 89.7 |
e-value: 1e-17 |
Identity: 34.72% |
Span: 420bp (63.9%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Psychrobacter sp. (strain PRwf-1) GN=rlmN PE=3 SV=1 |
| Match: Q3A2Z4 |
score: 89.7 |
e-value: 1e-17 |
Identity: 38.13% |
Span: 405bp (61.6%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=rlmN PE=3 ... |
| Match: Q2LUM5 |
score: 89.4 |
e-value: 2e-17 |
Identity: 36.3% |
Span: 405bp (61.6%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Syntrophus aciditrophicus (strain SB) GN=rlmN PE=3 SV=1 |
| Match: Q1QTL1 |
score: 89.4 |
e-value: 2e-17 |
Identity: 37.31% |
Span: 393bp (59.8%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIM... |
| Match: B6J7Q9 |
score: 89 |
e-value: 2e-17 |
Identity: 40.74% |
Span: 396bp (60.3%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Coxiella burnetii (strain CbuK_Q154) GN=rlmN PE=3 SV=1 |
| Match: Q2SDW1 |
score: 88.6 |
e-value: 3e-17 |
Identity: 36.3% |
Span: 405bp (61.6%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Hahella chejuensis (strain KCTC 2396) GN=rlmN PE=3 SV=1 |
| Match: O34617 |
score: 88.6 |
e-value: 3e-17 |
Identity: 35.56% |
Span: 405bp (61.6%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Bacillus subtilis GN=rlmN PE=3 SV=1 |
| Match: Q8Y9P2 |
score: 88.2 |
e-value: 4e-17 |
Identity: 34.85% |
Span: 396bp (60.3%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Listeria monocytogenes GN=rlmN PE=3 SV=1 |
| Match: A9IK57 |
score: 88.2 |
e-value: 4e-17 |
Identity: 38.81% |
Span: 402bp (61.2%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) G... |
| Match: Q1AYW0 |
score: 87.8 |
e-value: 5e-17 |
Identity: 42.98% |
Span: 363bp (55.3%) |
Frame: 1 |
| Ribosomal RNA large subunit methyltransferase N OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=rlmN PE... |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
