| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|225455513|ref|XP_002265347.1| |
score: 238 |
e-value: 3e-61 |
Identity: 96.72% |
Span: 366bp (55.4%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147777804|emb|CAN62522.1| hypothetical protein [Vitis vinifera] |
| Match: gi|255640525|gb|ACU20548.1| |
score: 233 |
e-value: 9e-60 |
Identity: 93.44% |
Span: 366bp (55.4%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|255627607|gb|ACU14148.1| |
score: 231 |
e-value: 3e-59 |
Identity: 95% |
Span: 360bp (54.5%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|124360667|gb|ABN08656.1| |
score: 230 |
e-value: 8e-59 |
Identity: 92.62% |
Span: 366bp (55.4%) |
Frame: 1 |
| Ribosomal protein S10, eukaryotic and archaeal form [Medicago truncatula] |
| Match: gi|270235410|emb|CBI24538.1| |
score: 229 |
e-value: 2e-58 |
Identity: 96.58% |
Span: 351bp (53.1%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|255628657|gb|ACU14673.1| |
score: 228 |
e-value: 4e-58 |
Identity: 94.17% |
Span: 360bp (54.5%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|140056455|gb|ABO81148.1| |
score: 228 |
e-value: 5e-58 |
Identity: 90.98% |
Span: 366bp (55.4%) |
Frame: 1 |
| Ribosomal protein S10, eukaryotic and archaeal form [Medicago truncatula] |
| Match: gi|255539715|ref|XP_002510922.1| |
score: 227 |
e-value: 8e-58 |
Identity: 93.39% |
Span: 363bp (54.9%) |
Frame: 1 |
| 40S ribosomal protein S20, putative [Ricinus communis] >gi223550037|gb|EEF51524.1| 40S ribosomal protein S20, putativ... |
| Match: gi|255629581|gb|ACU15138.1| |
score: 226 |
e-value: 1e-57 |
Identity: 92.5% |
Span: 360bp (54.5%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|192910806|gb|ACF06511.1| |
score: 226 |
e-value: 1e-57 |
Identity: 90.98% |
Span: 366bp (55.4%) |
Frame: 1 |
| structural constituent of ribosome [Elaeis guineensis] |
| Match: gi|15232789|ref|NP_190321.1| |
score: 226 |
e-value: 2e-57 |
Identity: 91.8% |
Span: 366bp (55.4%) |
Frame: 1 |
| 40S ribosomal protein S20 (RPS20B) [Arabidopsis thaliana] >gi30692858|ref|NP_850665.1| 40S ribosomal protein S20 (RPS... |
| Match: gi|15241768|ref|NP_201036.1| |
score: 223 |
e-value: 9e-57 |
Identity: 91.74% |
Span: 363bp (54.9%) |
Frame: 1 |
| 40S ribosomal protein S20 (RPS20C) [Arabidopsis thaliana] >gi22331606|ref|NP_190089.2| 40S ribosomal protein S20 (RPS... |
| Match: gi|224134518|ref|XP_002321843.1| |
score: 223 |
e-value: 1e-56 |
Identity: 92.5% |
Span: 360bp (54.5%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi118484818|gb|ABK94276.1| unknown [Populus trichocarpa] >gi|222868839|gb|EE... |
| Match: gi|224122592|ref|XP_002318875.1| |
score: 221 |
e-value: 5e-56 |
Identity: 91.67% |
Span: 360bp (54.5%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi118483019|gb|ABK93421.1| unknown [Populus trichocarpa] >gi|118486550|gb|AB... |
| Match: gi|7671404|emb|CAB89318.1| |
score: 220 |
e-value: 1e-55 |
Identity: 93.16% |
Span: 351bp (53.1%) |
Frame: 1 |
| 40S ribsomomal protein [Arabidopsis thaliana] >gi8809643|dbj|BAA97194.1| 40S ribosomal protein S20 [Arabidopsis thali... |
| Match: gi|116783938|gb|ABK23149.1| |
score: 215 |
e-value: 3e-54 |
Identity: 87.7% |
Span: 366bp (55.4%) |
Frame: 1 |
| unknown [Picea sitchensis] >gi116783946|gb|ABK23153.1| unknown [Picea sitchensis] >gi|116790874|gb|ABK25771.1| unknow... |
| Match: gi|116780034|gb|ABK21528.1| |
score: 213 |
e-value: 1e-53 |
Identity: 86.07% |
Span: 366bp (55.4%) |
Frame: 1 |
| unknown [Picea sitchensis] >gi116790483|gb|ABK25630.1| unknown [Picea sitchensis] >gi|116790759|gb|ABK25729.1| unknow... |
| Match: gi|224067716|ref|XP_002302530.1| |
score: 211 |
e-value: 6e-53 |
Identity: 86.67% |
Span: 360bp (54.5%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222844256|gb|EEE81803.1| predicted protein [Populus trichocarpa] |
| Match: gi|168065205|ref|XP_001784545.1| |
score: 206 |
e-value: 2e-51 |
Identity: 87.93% |
Span: 348bp (52.6%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162663926|gb|EDQ50666.1| predicted protein [Physcomitrella... |
| Match: gi|168056159|ref|XP_001780089.1| |
score: 202 |
e-value: 2e-50 |
Identity: 87.07% |
Span: 348bp (52.6%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162668492|gb|EDQ55098.1| predicted protein [Physcomitrella... |
| Match: gi|168053947|ref|XP_001779395.1| |
score: 199 |
e-value: 1e-49 |
Identity: 87.18% |
Span: 348bp (52.6%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162669193|gb|EDQ55785.1| predicted protein [Physcomitrella... |
| Match: gi|115451919|ref|NP_001049560.1| |
score: 199 |
e-value: 2e-49 |
Identity: 83.33% |
Span: 357bp (54.0%) |
Frame: 1 |
| Os03g0249400 [Oryza sativa (japonica cultivar-group)] >gi108707181|gb|ABF94976.1| 40S ribosomal protein S20, putative... |
| Match: gi|115481278|ref|NP_001064232.1| |
score: 199 |
e-value: 2e-49 |
Identity: 83.47% |
Span: 360bp (54.5%) |
Frame: 1 |
| Os10g0170200 [Oryza sativa (japonica cultivar-group)] >gi21671882|gb|AAM74244.1|AC074355_6 Putative ribosomal protein... |
| Match: gi|125531254|gb|EAY77819.1| |
score: 197 |
e-value: 9e-49 |
Identity: 84.62% |
Span: 348bp (52.6%) |
Frame: 1 |
| hypothetical protein OsI_32860 [Oryza sativa Indica Group] |
| Match: gi|115466228|ref|NP_001056713.1| |
score: 196 |
e-value: 2e-48 |
Identity: 82.79% |
Span: 363bp (54.9%) |
Frame: 1 |
| Os06g0134000 [Oryza sativa (japonica cultivar-group)] >gi109940157|sp|P35686.2|RS20_ORYSJ RecName: Full=40S ribosomal... |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 6 hits recorded |
| Match: At3G47370.3 |
score: 226 |
e-value: 1e-59 |
Identity: 91.8% |
Span: 366bp (55.4%) |
Frame: 1 |
| structural constituent of ribosome | chr3:17464656-17465422 REVERSE |
| Match: At3G47370.1 |
score: 226 |
e-value: 1e-59 |
Identity: 91.8% |
Span: 366bp (55.4%) |
Frame: 1 |
| 40S ribosomal protein S20 (RPS20B) | chr3:17464656-17465422 REVERSE |
| Match: At3G47370.2 |
score: 226 |
e-value: 1e-59 |
Identity: 91.8% |
Span: 366bp (55.4%) |
Frame: 1 |
| 40S ribosomal protein S20 (RPS20B) | chr3:17464656-17465422 REVERSE |
| Match: At5G62300.2 |
score: 223 |
e-value: 6e-59 |
Identity: 91.74% |
Span: 363bp (54.9%) |
Frame: 1 |
| 40S ribosomal protein S20 (RPS20C) | chr5:25038614-25039461 REVERSE |
| Match: At5G62300.1 |
score: 223 |
e-value: 6e-59 |
Identity: 91.74% |
Span: 363bp (54.9%) |
Frame: 1 |
| 40S ribosomal protein S20 (RPS20C) | chr5:25038614-25039461 REVERSE |
| Match: At3G45030.1 |
score: 223 |
e-value: 6e-59 |
Identity: 91.74% |
Span: 363bp (54.9%) |
Frame: 1 |
| 40S ribosomal protein S20 (RPS20A) | chr3:16482591-16483297 REVERSE |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: Q9STY6 |
score: 226 |
e-value: 1e-58 |
Identity: 91.8% |
Span: 366bp (55.4%) |
Frame: 1 |
| 40S ribosomal protein S20-2 OS=Arabidopsis thaliana GN=RPS20B PE=2 SV=1 |
| Match: P49200 |
score: 223 |
e-value: 6e-58 |
Identity: 91.74% |
Span: 363bp (54.9%) |
Frame: 1 |
| 40S ribosomal protein S20-1 OS=Arabidopsis thaliana GN=RPS20A PE=1 SV=2 |
| Match: P35686 |
score: 196 |
e-value: 1e-49 |
Identity: 82.79% |
Span: 363bp (54.9%) |
Frame: 1 |
| 40S ribosomal protein S20 OS=Oryza sativa subsp. japonica GN=RPS20 PE=2 SV=2 |
| Match: P60868 |
score: 177 |
e-value: 7e-44 |
Identity: 71.19% |
Span: 354bp (53.6%) |
Frame: 1 |
| 40S ribosomal protein S20 OS=Rattus norvegicus GN=Rps20 PE=3 SV=1 |
| Match: P60867 |
score: 177 |
e-value: 7e-44 |
Identity: 71.19% |
Span: 354bp (53.6%) |
Frame: 1 |
| 40S ribosomal protein S20 OS=Mus musculus GN=Rps20 PE=1 SV=1 |
| Match: Q4R5D0 |
score: 177 |
e-value: 7e-44 |
Identity: 71.19% |
Span: 354bp (53.6%) |
Frame: 1 |
| 40S ribosomal protein S20 OS=Macaca fascicularis GN=RPS20 PE=3 SV=1 |
| Match: P60866 |
score: 177 |
e-value: 7e-44 |
Identity: 71.19% |
Span: 354bp (53.6%) |
Frame: 1 |
| 40S ribosomal protein S20 OS=Homo sapiens GN=RPS20 PE=1 SV=1 |
| Match: Q3ZBH8 |
score: 177 |
e-value: 7e-44 |
Identity: 71.19% |
Span: 354bp (53.6%) |
Frame: 1 |
| 40S ribosomal protein S20 OS=Bos taurus GN=RPS20 PE=3 SV=1 |
| Match: Q5R924 |
score: 174 |
e-value: 4e-43 |
Identity: 70.34% |
Span: 354bp (53.6%) |
Frame: 1 |
| 40S ribosomal protein S20 OS=Pongo abelii GN=RPS20 PE=3 SV=1 |
| Match: A1XQU9 |
score: 173 |
e-value: 1e-42 |
Identity: 70.34% |
Span: 354bp (53.6%) |
Frame: 1 |
| 40S ribosomal protein S20 OS=Sus scrofa GN=RPS20 PE=3 SV=1 |
| Match: P23403 |
score: 171 |
e-value: 3e-42 |
Identity: 76.7% |
Span: 309bp (46.7%) |
Frame: 1 |
| 40S ribosomal protein S20 OS=Xenopus laevis GN=rps20 PE=3 SV=1 |
| Match: P55828 |
score: 159 |
e-value: 1e-38 |
Identity: 63.64% |
Span: 363bp (54.9%) |
Frame: 1 |
| 40S ribosomal protein S20 OS=Drosophila melanogaster GN=RpS20 PE=1 SV=1 |
| Match: O74893 |
score: 155 |
e-value: 2e-37 |
Identity: 72.28% |
Span: 303bp (45.8%) |
Frame: 1 |
| 40S ribosomal protein S20 OS=Schizosaccharomyces pombe GN=rps20 PE=1 SV=1 |
| Match: Q54Y41 |
score: 142 |
e-value: 1e-33 |
Identity: 58.97% |
Span: 351bp (53.1%) |
Frame: 1 |
| 40S ribosomal protein S20 OS=Dictyostelium discoideum GN=rps20 PE=3 SV=1 |
| Match: P38701 |
score: 128 |
e-value: 3e-29 |
Identity: 55.96% |
Span: 327bp (49.5%) |
Frame: 1 |
| 40S ribosomal protein S20 OS=Saccharomyces cerevisiae GN=RPS20 PE=1 SV=3 |
| Match: Q08068 |
score: 115 |
e-value: 3e-25 |
Identity: 88.14% |
Span: 177bp (26.8%) |
Frame: 1 |
| 40S ribosomal protein S20 (Fragment) OS=Zea mays GN=RPS20 PE=3 SV=1 |
| Match: Q979T2 |
score: 89 |
e-value: 2e-17 |
Identity: 41.41% |
Span: 297bp (44.9%) |
Frame: 1 |
| 30S ribosomal protein S10P OS=Thermoplasma volcanium GN=rps10p PE=3 SV=1 |
| Match: B6YVG1 |
score: 88.6 |
e-value: 3e-17 |
Identity: 43% |
Span: 300bp (45.4%) |
Frame: 1 |
| 30S ribosomal protein S10P OS=Thermococcus onnurineus (strain NA1) GN=rps10p PE=3 SV=1 |
| Match: C5A5P5 |
score: 88.6 |
e-value: 3e-17 |
Identity: 43% |
Span: 300bp (45.4%) |
Frame: 1 |
| 30S ribosomal protein S10P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps10p PE=3 SV=1 |
| Match: Q6L201 |
score: 88.6 |
e-value: 3e-17 |
Identity: 43% |
Span: 300bp (45.4%) |
Frame: 1 |
| 30S ribosomal protein S10P OS=Picrophilus torridus GN=rps10p PE=3 SV=1 |
| Match: P28079 |
score: 87.4 |
e-value: 7e-17 |
Identity: 40.4% |
Span: 297bp (44.9%) |
Frame: 1 |
| 30S ribosomal protein S10P OS=Thermoplasma acidophilum GN=rps10p PE=3 SV=1 |
| Match: Q5JFZ5 |
score: 87 |
e-value: 9e-17 |
Identity: 42% |
Span: 300bp (45.4%) |
Frame: 1 |
| 30S ribosomal protein S10P OS=Pyrococcus kodakaraensis GN=rps10p PE=3 SV=1 |
| Match: P61886 |
score: 86.3 |
e-value: 2e-16 |
Identity: 41% |
Span: 300bp (45.4%) |
Frame: 1 |
| 30S ribosomal protein S10P OS=Pyrococcus woesei GN=rps10p PE=3 SV=1 |
| Match: P61885 |
score: 86.3 |
e-value: 2e-16 |
Identity: 41% |
Span: 300bp (45.4%) |
Frame: 1 |
| 30S ribosomal protein S10P OS=Pyrococcus furiosus GN=rps10p PE=3 SV=1 |
| Match: Q9V0V6 |
score: 85.9 |
e-value: 2e-16 |
Identity: 41% |
Span: 300bp (45.4%) |
Frame: 1 |
| 30S ribosomal protein S10P OS=Pyrococcus abyssi GN=rps10p PE=3 SV=1 |
|
| 49 lower scoring hits censored -- only 25 best hits are stored. |
