| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|30524687|emb|CAC85245.1| |
score: 209.1 |
e-value: 3.9e-53 |
Identity: 66.27% |
Span: 480bp (72.2%) |
Frame: 2 |
| salt tolerance protein 4 [Beta vulgaris] |
| Match: gi|25405472|pir||E96553 |
score: 189.5 |
e-value: 3.2e-47 |
Identity: 61.96% |
Span: 474bp (71.3%) |
Frame: 2 |
| gi|25405472|pir||E96553 probable RNA-binding protein 35994-37391 [imported] - Arabidopsis thaliana gi|12325357|gb|AAG... |
| Match: gi|18403559|ref|NP_564591.1| |
score: 189.5 |
e-value: 3.2e-47 |
Identity: 61.96% |
Span: 474bp (71.3%) |
Frame: 2 |
| Y14; RNA binding / protein binding [Arabidopsis thaliana] |
| Match: gi|21536738|gb|AAM61070.1| |
score: 188.7 |
e-value: 5.5e-47 |
Identity: 61.96% |
Span: 474bp (71.3%) |
Frame: 2 |
| RNA-binding protein, putative [Arabidopsis thaliana] |
| Match: gi|4826972|ref|NP_005096.1| |
score: 149.4 |
e-value: 3.7e-35 |
Identity: 50.31% |
Span: 480bp (72.2%) |
Frame: 2 |
| gi|4826972|ref|NP_005096.1| RNA binding motif protein 8A; binder of OVCA1-1; ribonucleoprotein RBM8; RNA binding moti... |
| Match: gi|34784590|gb|AAH56659.1| |
score: 149.4 |
e-value: 3.7e-35 |
Identity: 50.31% |
Span: 480bp (72.2%) |
Frame: 2 |
| gi|34784590|gb|AAH56659.1| MGC68591 protein [Xenopus laevis] |
| Match: gi|10197630|gb|AAG14951.1| |
score: 148.7 |
e-value: 6.3e-35 |
Identity: 50.63% |
Span: 471bp (70.8%) |
Frame: 2 |
| gi|10197630|gb|AAG14951.1| MDS014 [Homo sapiens] gi|10436081|gb|AAG16782.1| RNA binding motif protein 8B [Homo sapiens] |
| Match: gi|11034807|gb|AAG27092.1| |
score: 148.7 |
e-value: 6.3e-35 |
Identity: 50.31% |
Span: 480bp (72.2%) |
Frame: 2 |
| gi|11034807|gb|AAG27092.1| RNA-binding protein Y14 [Xenopus laevis] |
| Match: gi|7158824|gb|AAF37551.1| |
score: 148.7 |
e-value: 6.3e-35 |
Identity: 50.31% |
Span: 480bp (72.2%) |
Frame: 2 |
| gi|7158824|gb|AAF37551.1| RNA binding motif protein 8 [Homo sapiens] gi|10436078|gb|AAG16781.1| RNA binding motif pro... |
| Match: gi|13385356|ref|NP_080151.1| |
score: 147.9 |
e-value: 1.1e-34 |
Identity: 50.63% |
Span: 471bp (70.8%) |
Frame: 2 |
| gi|13385356|ref|NP_080151.1| RNA binding motif protein 8 [Mus musculus] gi|12845066|dbj|BAB26605.1| unnamed protein p... |
| Match: gi|20804379|dbj|BAB92096.1| |
score: 144.4 |
e-value: 1.2e-33 |
Identity: 55.81% |
Span: 378bp (56.8%) |
Frame: 2 |
| gi|20804379|dbj|BAB92096.1| RNA binding motif protein 8 [Oryzias latipes] |
| Match: gi|20804381|dbj|BAB92097.1| |
score: 144.4 |
e-value: 1.2e-33 |
Identity: 55.81% |
Span: 378bp (56.8%) |
Frame: 2 |
| gi|20804381|dbj|BAB92097.1| RNA binding motif protein 8 [Oryzias latipes] |
| Match: gi|34810526|pdb|1P27|B |
score: 132.9 |
e-value: 3.6e-30 |
Identity: 56.19% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|34810526|pdb|1P27|B Chain B, Crystal Structure Of The Human Y14MAGOH COMPLEX gi|34810528|pdb|1P27|D Chain D, Cryst... |
| Match: gi|31217248|ref|XP_316392.1| |
score: 129.8 |
e-value: 3e-29 |
Identity: 50% |
Span: 378bp (56.8%) |
Frame: 2 |
| gi|31217248|ref|XP_316392.1| ENSANGP00000013045 [Anopheles gambiae] gi|21299368|gb|EAA11513.1| ENSANGP00000013045 [An... |
| Match: gi|24651979|ref|NP_610454.2| |
score: 121.7 |
e-value: 8.2e-27 |
Identity: 45.97% |
Span: 372bp (55.9%) |
Frame: 2 |
| gi|24651979|ref|NP_610454.2| tsunagi CG8781-PA [Drosophila melanogaster] gi|31615362|pdb|1HL6|A Chain A, A Novel Mode... |
| Match: gi|23509278|ref|NP_701945.1| |
score: 120.9 |
e-value: 1.4e-26 |
Identity: 58.82% |
Span: 255bp (38.3%) |
Frame: 2 |
| gi|23509278|ref|NP_701945.1| RNA binding protein, putative [Plasmodium falciparum 3D7] gi|23497120|gb|AAN36669.1| RNA... |
| Match: gi|630730|pir||S43599 |
score: 120.2 |
e-value: 2.4e-26 |
Identity: 46.03% |
Span: 369bp (55.5%) |
Frame: 2 |
| gi|630730|pir||S43599 Snf5 homolog R07E5.3 - Caenorhabditis elegans |
| Match: gi|32420437|ref|XP_330662.1| |
score: 120.2 |
e-value: 2.4e-26 |
Identity: 55.75% |
Span: 339bp (51.0%) |
Frame: 2 |
| gi|32420437|ref|XP_330662.1| hypothetical protein [Neurospora crassa] gi|28927133|gb|EAA36090.1| hypothetical protein... |
| Match: gi|17554514|ref|NP_497891.1| |
score: 120.2 |
e-value: 2.4e-26 |
Identity: 46.03% |
Span: 369bp (55.5%) |
Frame: 2 |
| gi|17554514|ref|NP_497891.1| RNA-binding protein like (rnp-5) [Caenorhabditis elegans] gi|25395691|pir||F88427 protei... |
| Match: gi|17945135|gb|AAL48627.1| |
score: 119.8 |
e-value: 3.1e-26 |
Identity: 45.16% |
Span: 372bp (55.9%) |
Frame: 2 |
| gi|17945135|gb|AAL48627.1| RE09075p [Drosophila melanogaster] |
| Match: gi|38105758|gb|EAA52145.1| |
score: 119.8 |
e-value: 3.1e-26 |
Identity: 51.75% |
Span: 342bp (51.4%) |
Frame: 2 |
| gi|38105758|gb|EAA52145.1| hypothetical protein MG03740.4 [Magnaporthe grisea 70-15] |
| Match: gi|16797818|gb|AAL29185.1| |
score: 117.9 |
e-value: 1.2e-25 |
Identity: 45.16% |
Span: 372bp (55.9%) |
Frame: 2 |
| gi|16797818|gb|AAL29185.1| Tsunagi [Drosophila melanogaster] |
| Match: gi|31615830|pdb|1OO0|B |
score: 117.9 |
e-value: 1.2e-25 |
Identity: 54.95% |
Span: 273bp (41.1%) |
Frame: 2 |
| gi|31615830|pdb|1OO0|B Chain B, Crystal Structure Of The Drosophila Mago Nashi-Y14 Complex |
| Match: gi|19115351|ref|NP_594439.1| |
score: 103.6 |
e-value: 2.3e-21 |
Identity: 55.06% |
Span: 267bp (40.2%) |
Frame: 2 |
| gi|19115351|ref|NP_594439.1| putative ribonucleoprotein [Schizosaccharomyces pombe] gi|7492900|pir||T38229 probable r... |
| Match: gi|23478982|gb|EAA15929.1| |
score: 98.21 |
e-value: 9.8e-20 |
Identity: 58.21% |
Span: 201bp (30.2%) |
Frame: 2 |
| gi|23478982|gb|EAA15929.1| RNA binding motif protein 8B-related [Plasmodium yoelii yoelii] |
| Match: gi|15010564|gb|AAK73941.1| |
score: 64.31 |
e-value: 1.6e-09 |
Identity: 54.67% |
Span: 210bp (31.6%) |
Frame: 2 |
| gi|15010564|gb|AAK73941.1| At1g51510/F5D21_5 [Arabidopsis thaliana] gi|20334850|gb|AAM16181.1| At1g51510/F5D21_5 [Ara... |
| Match: gi|33865457|ref|NP_897016.1| |
score: 63.54 |
e-value: 2.7e-09 |
Identity: 38.46% |
Span: 234bp (35.2%) |
Frame: 2 |
| gi|33865457|ref|NP_897016.1| putativeRNA-binding protein RbpD [Synechococcus sp. WH 8102] gi|33632626|emb|CAE07438.1|... |
| Match: gi|6273351|gb|AAF06330.1| |
score: 62.77 |
e-value: 4.5e-09 |
Identity: 27.73% |
Span: 318bp (47.8%) |
Frame: 2 |
| gi|6273351|gb|AAF06330.1| vitamin D response element binding protein [Saguinus oedipus] |
| Match: gi|15229743|ref|NP_187747.1| |
score: 62 |
e-value: 7.8e-09 |
Identity: 35.9% |
Span: 234bp (35.2%) |
Frame: 2 |
| eukaryotic translation initiation factor 3G / eIF3g [Arabidopsis thaliana] >gi12322907|gb|AAG51445.1|AC008153_18 puta... |
| Match: gi|12407751|gb|AAG53636.1| |
score: 62 |
e-value: 7.8e-09 |
Identity: 35.9% |
Span: 234bp (35.2%) |
Frame: 2 |
| gi|12407751|gb|AAG53636.1| initiation factor 3g [Arabidopsis thaliana] gi|21593472|gb|AAM65439.1| putative eukaryotic... |
| Match: gi|14043072|ref|NP_112533.1| |
score: 62 |
e-value: 7.8e-09 |
Identity: 27.73% |
Span: 318bp (47.8%) |
Frame: 2 |
| gi|14043072|ref|NP_112533.1| heterogeneous nuclear ribonucleoprotein A2/B1 isoform B1; heterogeneous nuclear ribonucl... |
| Match: gi|23266713|gb|AAN16352.1| |
score: 62 |
e-value: 7.8e-09 |
Identity: 27.73% |
Span: 318bp (47.8%) |
Frame: 2 |
| gi|23266713|gb|AAN16352.1| heterogeneous nuclear ribonucleoprotein A2/B1/B0 [Mus musculus] |
| Match: gi|4504447|ref|NP_002128.1| |
score: 62 |
e-value: 7.8e-09 |
Identity: 27.73% |
Span: 318bp (47.8%) |
Frame: 2 |
| gi|4504447|ref|NP_002128.1| heterogeneous nuclear ribonucleoprotein A2/B1 isoform A2; heterogeneous nuclear ribonucle... |
| Match: gi|7949053|ref|NP_058086.1| |
score: 62 |
e-value: 7.8e-09 |
Identity: 27.73% |
Span: 318bp (47.8%) |
Frame: 2 |
| gi|7949053|ref|NP_058086.1| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 1 [Mus musculus] gi|6647752|sp|O885... |
| Match: gi|21071091|gb|AAK98601.2| |
score: 62 |
e-value: 7.8e-09 |
Identity: 27.73% |
Span: 318bp (47.8%) |
Frame: 2 |
| gi|21071091|gb|AAK98601.2| heterogeneous nuclear ribonucleoprotein A2/B1 [Mus musculus] |
| Match: gi|31455238|gb|AAH00506.3| |
score: 62 |
e-value: 7.8e-09 |
Identity: 27.73% |
Span: 318bp (47.8%) |
Frame: 2 |
| gi|31455238|gb|AAH00506.3| HNRPA2B1 protein [Homo sapiens] |
| Match: gi|32880197|ref|NP_872591.1| |
score: 62 |
e-value: 7.8e-09 |
Identity: 27.73% |
Span: 318bp (47.8%) |
Frame: 2 |
| gi|32880197|ref|NP_872591.1| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 2 [Mus musculus] gi|26354140|dbj|B... |
| Match: gi|28828645|gb|AAO51248.1| |
score: 61.23 |
e-value: 1.3e-08 |
Identity: 42.19% |
Span: 192bp (28.9%) |
Frame: 2 |
| gi|28828645|gb|AAO51248.1| similar to Dictyostelium discoideum (Slime mold). Coronin binding protein |
| Match: gi|34859244|ref|XP_230540.2| |
score: 60.46 |
e-value: 2.3e-08 |
Identity: 26.89% |
Span: 318bp (47.8%) |
Frame: 2 |
| gi|34859244|ref|XP_230540.2| similar to heterogeneous nuclear ribonucleoprotein A2/B1 [Rattus norvegicus] |
| Match: gi|38111130|gb|EAA56754.1| |
score: 60.08 |
e-value: 2.9e-08 |
Identity: 41.1% |
Span: 219bp (32.9%) |
Frame: 2 |
| gi|38111130|gb|EAA56754.1| hypothetical protein MG07109.4 [Magnaporthe grisea 70-15] |
| Match: gi|87650|pir||S02061 |
score: 58.15 |
e-value: 1.1e-07 |
Identity: 27.35% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|87650|pir||S02061 heterogeneous ribonuclear particle protein A1.beta - human gi|36102|emb|CAA29922.1| unnamed prot... |
| Match: gi|30583983|gb|AAP36240.1| |
score: 57.77 |
e-value: 1.5e-07 |
Identity: 36.59% |
Span: 246bp (37.0%) |
Frame: 2 |
| gi|30583983|gb|AAP36240.1| Homo sapiens eukaryotic translation initiation factor 3, subunit 4 delta, 44kDa [synthetic... |
| Match: gi|4097873|gb|AAD00176.1| |
score: 57.77 |
e-value: 1.5e-07 |
Identity: 36.59% |
Span: 246bp (37.0%) |
Frame: 2 |
| gi|4097873|gb|AAD00176.1| eIF3-p44 [Mus musculus] |
| Match: gi|23503064|sp|O75821|IF34_HUMAN |
score: 57.77 |
e-value: 1.5e-07 |
Identity: 36.59% |
Span: 246bp (37.0%) |
Frame: 2 |
| gi|23503064|sp|O75821|IF34_HUMAN Eukaryotic translation initiation factor 3 subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3... |
| Match: gi|31980808|ref|NP_058572.2| |
score: 57.77 |
e-value: 1.5e-07 |
Identity: 36.59% |
Span: 246bp (37.0%) |
Frame: 2 |
| gi|31980808|ref|NP_058572.2| eukaryotic translation initiation factor 3, subunit 4 (delta); translation initiation fa... |
| Match: gi|38090535|ref|XP_137113.4| |
score: 57.77 |
e-value: 1.5e-07 |
Identity: 27.56% |
Span: 330bp (49.6%) |
Frame: 2 |
| gi|38090535|ref|XP_137113.4| similar to Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 / hnRNP B1) [Mus mus... |
| Match: gi|34862808|ref|XP_219809.2| |
score: 57.38 |
e-value: 1.9e-07 |
Identity: 36.54% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|34862808|ref|XP_219809.2| similar to Cstf2t-pending protein [Rattus norvegicus] |
| Match: gi|10177573|dbj|BAB10805.1| |
score: 57 |
e-value: 2.5e-07 |
Identity: 33.33% |
Span: 225bp (33.8%) |
Frame: 2 |
| gi|10177573|dbj|BAB10805.1| eukaryotic translation initiation factor 3 subunit-like protein [Arabidopsis thaliana] |
| Match: gi|37541487|ref|XP_015755.4| |
score: 57 |
e-value: 2.5e-07 |
Identity: 24.59% |
Span: 333bp (50.1%) |
Frame: 2 |
| gi|37541487|ref|XP_015755.4| similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Sin... |
| Match: gi|30681225|ref|NP_196219.2| |
score: 57 |
e-value: 2.5e-07 |
Identity: 33.33% |
Span: 225bp (33.8%) |
Frame: 2 |
| gi|30681225|ref|NP_196219.2| eukaryotic translation initiation factor 3, putative [Arabidopsis thaliana] gi|18252945|... |
| Match: gi|24762707|ref|NP_611955.2| |
score: 57 |
e-value: 2.5e-07 |
Identity: 30.86% |
Span: 243bp (36.5%) |
Frame: 2 |
| gi|24762707|ref|NP_611955.2| CG4806-PA [Drosophila melanogaster] gi|21626772|gb|AAF47253.2| CG4806-PA [Drosophila mel... |
| Match: gi|27882514|gb|AAH44442.1| |
score: 57 |
e-value: 2.5e-07 |
Identity: 26.72% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|27882514|gb|AAH44442.1| Similar to heterogeneous nuclear ribonucleoprotein A1 [Danio rerio] |
| Match: gi|26341156|dbj|BAC34240.1| |
score: 56.61 |
e-value: 3.3e-07 |
Identity: 38.64% |
Span: 264bp (39.7%) |
Frame: 2 |
| gi|26341156|dbj|BAC34240.1| unnamed protein product [Mus musculus] |
| Match: gi|20380061|gb|AAH28239.1| |
score: 56.61 |
e-value: 3.3e-07 |
Identity: 38.64% |
Span: 264bp (39.7%) |
Frame: 2 |
| gi|20380061|gb|AAH28239.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant [Homo sapiens] |
| Match: gi|14149675|ref|NP_056050.1| |
score: 56.61 |
e-value: 3.3e-07 |
Identity: 38.64% |
Span: 264bp (39.7%) |
Frame: 2 |
| gi|14149675|ref|NP_056050.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant [Homo sapiens] gi... |
| Match: gi|26351239|dbj|BAC39256.1| |
score: 56.61 |
e-value: 3.3e-07 |
Identity: 38.64% |
Span: 264bp (39.7%) |
Frame: 2 |
| gi|26351239|dbj|BAC39256.1| unnamed protein product [Mus musculus] |
| Match: gi|13752575|ref|NP_112539.1| |
score: 56.61 |
e-value: 3.3e-07 |
Identity: 38.64% |
Span: 264bp (39.7%) |
Frame: 2 |
| gi|13752575|ref|NP_112539.1| cleavage stimulation factor, 3' pre-RNA subunit 2, tau; cleavage stimulation factor, 3' ... |
| Match: gi|38085423|ref|XP_123387.2| |
score: 56.61 |
e-value: 3.3e-07 |
Identity: 25.64% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|38085423|ref|XP_123387.2| similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Sin... |
| Match: gi|20072518|gb|AAH26995.1| |
score: 56.61 |
e-value: 3.3e-07 |
Identity: 38.64% |
Span: 264bp (39.7%) |
Frame: 2 |
| gi|20072518|gb|AAH26995.1| Cstf2t-pending protein [Mus musculus] |
| Match: gi|32416548|ref|XP_328752.1| |
score: 56.61 |
e-value: 3.3e-07 |
Identity: 29.93% |
Span: 441bp (66.3%) |
Frame: 2 |
| gi|32416548|ref|XP_328752.1| hypothetical protein [Neurospora crassa] gi|28924327|gb|EAA33480.1| hypothetical protein... |
| Match: gi|26330250|dbj|BAC28855.1| |
score: 56.61 |
e-value: 3.3e-07 |
Identity: 38.64% |
Span: 264bp (39.7%) |
Frame: 2 |
| gi|26330250|dbj|BAC28855.1| unnamed protein product [Mus musculus] gi|26350087|dbj|BAC38683.1| unnamed protein produc... |
| Match: gi|21624627|ref|NP_083808.1| |
score: 56.22 |
e-value: 4.3e-07 |
Identity: 38.46% |
Span: 234bp (35.2%) |
Frame: 2 |
| gi|21624627|ref|NP_083808.1| RIKEN cDNA 6330548G22 [Mus musculus] gi|12857850|dbj|BAB31127.1| unnamed protein product... |
| Match: gi|26333021|dbj|BAC30228.1| |
score: 56.22 |
e-value: 4.3e-07 |
Identity: 38.46% |
Span: 234bp (35.2%) |
Frame: 2 |
| gi|26333021|dbj|BAC30228.1| unnamed protein product [Mus musculus] |
| Match: gi|26328597|dbj|BAC28037.1| |
score: 56.22 |
e-value: 4.3e-07 |
Identity: 38.64% |
Span: 264bp (39.7%) |
Frame: 2 |
| gi|26328597|dbj|BAC28037.1| unnamed protein product [Mus musculus] |
| Match: gi|34810648|pdb|1P1T|A |
score: 56.22 |
e-value: 4.3e-07 |
Identity: 38.64% |
Span: 264bp (39.7%) |
Frame: 2 |
| gi|34810648|pdb|1P1T|A Chain A, Nmr Structure Of The N-Terminal Rrm Domain Of Cleavage Stimulation Factor 64 Kda Subunit |
| Match: gi|18875338|ref|NP_573459.1| |
score: 56.22 |
e-value: 4.3e-07 |
Identity: 38.64% |
Span: 264bp (39.7%) |
Frame: 2 |
| gi|18875338|ref|NP_573459.1| cleavage stimulation factor, 3' pre-RNA subunit 2; cleavage stimulation factor, 3' pre-R... |
| Match: gi|37552516|ref|XP_208200.2| |
score: 56.22 |
e-value: 1.6e-07 |
Identity: 25.64% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|37552516|ref|XP_208200.2| similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Sin... |
| Match: gi|22478042|gb|AAH36719.1| |
score: 56.22 |
e-value: 4.3e-07 |
Identity: 38.64% |
Span: 264bp (39.7%) |
Frame: 2 |
| gi|22478042|gb|AAH36719.1| Unknown (protein for MGC:36412) [Mus musculus] |
| Match: gi|12641792|emb|CAC27531.1| |
score: 56.22 |
e-value: 4.3e-07 |
Identity: 38.67% |
Span: 225bp (33.8%) |
Frame: 2 |
| gi|12641792|emb|CAC27531.1| eukaryotic translation initiation factor 3 p42 [Platichthys flesus] |
| Match: gi|27735464|gb|AAH41291.1| |
score: 56.22 |
e-value: 4.3e-07 |
Identity: 38.64% |
Span: 264bp (39.7%) |
Frame: 2 |
| gi|27735464|gb|AAH41291.1| Cstf-64-prov protein [Xenopus laevis] |
| Match: gi|21619877|gb|AAH33135.1| |
score: 56.22 |
e-value: 4.3e-07 |
Identity: 38.64% |
Span: 264bp (39.7%) |
Frame: 2 |
| gi|21619877|gb|AAH33135.1| Similar to cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kD [Homo sapiens] |
| Match: gi|632500|gb|AAB50269.1| |
score: 56.22 |
e-value: 4.3e-07 |
Identity: 38.64% |
Span: 264bp (39.7%) |
Frame: 2 |
| gi|632500|gb|AAB50269.1| polyadenylation factor 64 kDa subunit |
| Match: gi|4557493|ref|NP_001316.1| |
score: 56.22 |
e-value: 4.3e-07 |
Identity: 38.64% |
Span: 264bp (39.7%) |
Frame: 2 |
| gi|4557493|ref|NP_001316.1| cleavage stimulation factor subunit 2 [Homo sapiens] gi|461847|sp|P33240|CST2_HUMAN Cleav... |
| Match: gi|27807239|ref|NP_777110.1| |
score: 56.22 |
e-value: 4.3e-07 |
Identity: 38.64% |
Span: 264bp (39.7%) |
Frame: 2 |
| gi|27807239|ref|NP_777110.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Bos taurus] gi|24416593|gb|AA... |
| Match: gi|5542530|pdb|2UP1|A |
score: 55.84 |
e-value: 5.6e-07 |
Identity: 25.64% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|5542530|pdb|2UP1|A Chain A, Structure Of Up1-Telomeric Dna Complex |
| Match: gi|133252|sp|P09867|ROA1_BOVIN |
score: 55.84 |
e-value: 5.6e-07 |
Identity: 25.64% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|133252|sp|P09867|ROA1_BOVIN Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-stran... |
| Match: gi|13436308|gb|AAH04945.1| |
score: 55.84 |
e-value: 5.6e-07 |
Identity: 25.64% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|13436308|gb|AAH04945.1| Unknown (protein for IMAGE:3615335) [Homo sapiens] |
| Match: gi|4504445|ref|NP_002127.1| |
score: 55.84 |
e-value: 5.6e-07 |
Identity: 25.64% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|4504445|ref|NP_002127.1| heterogeneous nuclear ribonucleoprotein A1 isoform a; nuclear ribonucleoprotein particle ... |
| Match: gi|8393547|ref|NP_058944.1| |
score: 55.84 |
e-value: 5.6e-07 |
Identity: 25.64% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|8393547|ref|NP_058944.1| heterogeneous nuclear ribonucleoprotein A1 [Rattus norvegicus] gi|133255|sp|P04256|ROA1_R... |
| Match: gi|20877266|ref|XP_123260.1| |
score: 55.84 |
e-value: 5.6e-07 |
Identity: 25.64% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|20877266|ref|XP_123260.1| similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Sin... |
| Match: gi|4503517|ref|NP_003746.1| |
score: 55.84 |
e-value: 5.6e-07 |
Identity: 35.37% |
Span: 246bp (37.0%) |
Frame: 2 |
| gi|4503517|ref|NP_003746.1| eukaryotic translation initiation factor 3, subunit 4 delta, 44kDa; eukaryotic translatio... |
| Match: gi|2194069|pdb|1HA1| |
score: 55.84 |
e-value: 5.6e-07 |
Identity: 25.64% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|2194069|pdb|1HA1| Hnrnp A1 (Rbd1,2) From Homo Sapiens |
| Match: gi|2554653|pdb|1UP1| |
score: 55.84 |
e-value: 5.6e-07 |
Identity: 25.64% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|2554653|pdb|1UP1| Up1, The Two Rna-Recognition Motif Domain Of Hnrnp A1 |
| Match: gi|38086779|ref|XP_284747.2| |
score: 55.84 |
e-value: 5.6e-07 |
Identity: 25.64% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|38086779|ref|XP_284747.2| similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Sin... |
| Match: gi|17533393|ref|NP_495778.1| |
score: 55.84 |
e-value: 5.6e-07 |
Identity: 27.27% |
Span: 330bp (49.6%) |
Frame: 2 |
| gi|17533393|ref|NP_495778.1| eukaryotic Initiation Factor (eif-3.G) [Caenorhabditis elegans] gi|3024026|sp|Q19706|IF3... |
| Match: gi|29124629|gb|AAH49046.1| |
score: 55.84 |
e-value: 5.6e-07 |
Identity: 35.37% |
Span: 246bp (37.0%) |
Frame: 2 |
| gi|29124629|gb|AAH49046.1| Similar to eukaryotic translation initiation factor 3, subunit 4 delta, 44kDa [Danio rerio] |
| Match: gi|1711240|dbj|BAA13161.1| |
score: 55.84 |
e-value: 5.6e-07 |
Identity: 25.64% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|1711240|dbj|BAA13161.1| TIS [Mus musculus] |
| Match: gi|20664272|pdb|1L3K|A |
score: 55.84 |
e-value: 5.6e-07 |
Identity: 25.64% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|20664272|pdb|1L3K|A Chain A, Up1, The Two Rna-Recognition Motif Domain Of Hnrnp A1 |
| Match: gi|38328245|gb|AAH62235.1| |
score: 55.84 |
e-value: 5.6e-07 |
Identity: 25.64% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|38328245|gb|AAH62235.1| Unknown (protein for MGC:72886) [Rattus norvegicus] |
| Match: gi|33416839|gb|AAH55499.1| |
score: 55.84 |
e-value: 5.6e-07 |
Identity: 25.64% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|33416839|gb|AAH55499.1| Unknown (protein for MGC:66127) [Danio rerio] |
| Match: gi|133254|sp|P09651|ROA1_HUMAN |
score: 55.84 |
e-value: 5.6e-07 |
Identity: 25.64% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|133254|sp|P09651|ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-stran... |
| Match: gi|14043070|ref|NP_112420.1| |
score: 55.84 |
e-value: 5.6e-07 |
Identity: 25.64% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|14043070|ref|NP_112420.1| heterogeneous nuclear ribonucleoprotein A1 isoform b; nuclear ribonucleoprotein particle... |
| Match: gi|104063|pir||B34840 |
score: 55.45 |
e-value: 7.3e-07 |
Identity: 24.79% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|104063|pir||B34840 heterogeneous ribonuclear particle protein A1.b - African clawed frog gi|214241|gb|AAA49742.1| ... |
| Match: gi|28374304|gb|AAH45260.1| |
score: 55.45 |
e-value: 7.3e-07 |
Identity: 24.79% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|28374304|gb|AAH45260.1| Hnrpa1-prov protein [Xenopus laevis] |
| Match: gi|133258|sp|P17130|ROA1_XENLA |
score: 55.45 |
e-value: 7.3e-07 |
Identity: 24.79% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|133258|sp|P17130|ROA1_XENLA Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP A1) (Helix-destabilizing pr... |
| Match: gi|34872304|ref|XP_341076.1| |
score: 55.45 |
e-value: 7.3e-07 |
Identity: 38.46% |
Span: 234bp (35.2%) |
Frame: 2 |
| gi|34872304|ref|XP_341076.1| similar to RIKEN cDNA 6330548G22 [Rattus norvegicus] |
| Match: gi|37550368|ref|XP_027964.2| |
score: 55.45 |
e-value: 7.3e-07 |
Identity: 25.64% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|37550368|ref|XP_027964.2| similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Sin... |
| Match: gi|1710626|sp|P51992|RO32_XENLA |
score: 55.07 |
e-value: 9.5e-07 |
Identity: 25.64% |
Span: 312bp (46.9%) |
Frame: 2 |
| gi|1710626|sp|P51992|RO32_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 2 (hnRNP A3(B)) gi|542650|pir||S40... |
| Match: gi|29347297|ref|NP_810800.1| |
score: 55.07 |
e-value: 9.5e-07 |
Identity: 34.62% |
Span: 234bp (35.2%) |
Frame: 2 |
| gi|29347297|ref|NP_810800.1| putative RNA-binding protein rbpA [Bacteroides thetaiotaomicron VPI-5482] gi|29339196|gb... |
| Match: gi|37552516|ref|XP_208200.2| |
score: 21.17 |
e-value: 1.6e-07 |
Identity: 32.14% |
Span: 84bp (12.6%) |
Frame: 3 |
| gi|37552516|ref|XP_208200.2| similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Sin... |
|
| 176 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 100 hits recorded |
| Match: At1g51510.1 |
score: 189.5 |
e-value: 1.2e-48 |
Identity: 61.96% |
Span: 474bp (71.3%) |
Frame: 2 |
| At1g51510.1 68408.m05321 RNA-binding protein, putative similar to RNA-binding protein 8 (Ribonucleoprotein RBM8) SP:Q... |
| Match: At3g11400.1 |
score: 62 |
e-value: 2.8e-10 |
Identity: 35.9% |
Span: 234bp (35.2%) |
Frame: 2 |
| At3g11400.1 68410.m01256 eukaryotic translation initiation factor 3 subunit g (eIF3g) nearly identical to eukaryotic ... |
| Match: At5g06000.1 |
score: 57 |
e-value: 9.1e-09 |
Identity: 33.33% |
Span: 225bp (33.8%) |
Frame: 2 |
| At5g06000.1 68412.m00618 eukaryotic translation initiation factor 3, putative similar to eukaryotic translation initi... |
| Match: At1g73530.1 |
score: 54.3 |
e-value: 5.9e-08 |
Identity: 28.35% |
Span: 381bp (57.3%) |
Frame: 2 |
| At1g73530.1 68408.m07810 RNA recognition motif (RRM) - containing protein low similarity to SP|Q03251 Glycine-rich RN... |
| Match: At1g74230.1 |
score: 51.99 |
e-value: 2.9e-07 |
Identity: 32.91% |
Span: 237bp (35.6%) |
Frame: 2 |
| At1g74230.1 68408.m07893 glycine-rich RNA-binding protein similar to RNA-binding protein GB:S46286 from [Nicotiana sy... |
| Match: At3g50670.1 |
score: 50.45 |
e-value: 8.5e-07 |
Identity: 35.62% |
Span: 219bp (32.9%) |
Frame: 2 |
| At3g50670.1 68410.m05135 U1 small nuclear ribonucleoprotein 70 (U1-70k) |
| Match: At5g64200.2 |
score: 50.45 |
e-value: 8.5e-07 |
Identity: 30.67% |
Span: 225bp (33.8%) |
Frame: 2 |
| At5g64200.2 68412.m08081 arginine/serine-rich splicing factor SC35 contains similarity to splicing factor |
| Match: At5g64200.1 |
score: 50.45 |
e-value: 8.5e-07 |
Identity: 30.67% |
Span: 225bp (33.8%) |
Frame: 2 |
| At5g64200.1 68412.m08080 arginine/serine-rich splicing factor SC35 contains similarity to splicing factor |
| Match: At1g53720.1 |
score: 49.68 |
e-value: 1.5e-06 |
Identity: 31.86% |
Span: 336bp (50.5%) |
Frame: 2 |
| At1g53720.1 68408.m05608 cyclophilin-RNA interacting protein, putative NULL |
| Match: At1g18630.1 |
score: 49.29 |
e-value: 1.9e-06 |
Identity: 34.18% |
Span: 237bp (35.6%) |
Frame: 2 |
| At1g18630.1 68408.m02096 glycine-rich RNA-binding protein, putative similar to glycine-rich RNA-binding protein from ... |
| Match: At5g54580.1 |
score: 49.29 |
e-value: 1.9e-06 |
Identity: 29.49% |
Span: 234bp (35.2%) |
Frame: 2 |
| At5g54580.1 68412.m06145 RNA recognition motif (RRM) - containing protein low similarity to RNA-binding protein RGP-3... |
| Match: At1g54080.1 |
score: 48.91 |
e-value: 2.5e-06 |
Identity: 28.4% |
Span: 243bp (36.5%) |
Frame: 2 |
| At1g54080.1 68408.m08802 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein GI... |
| Match: At4g00830.1 |
score: 48.52 |
e-value: 3.2e-06 |
Identity: 40% |
Span: 195bp (29.3%) |
Frame: 2 |
| At4g00830.1 68411.m00105 RNA recognition motif (RRM) - containing protein similar to nucleolin protein; contains Inte... |
| Match: At2g37510.1 |
score: 48.52 |
e-value: 3.2e-06 |
Identity: 32.5% |
Span: 240bp (36.1%) |
Frame: 2 |
| At2g37510.1 68409.m04161 RNA-binding protein, putative similar to SP|P10979 Glycine-rich RNA-binding, abscisic acid-i... |
| Match: At5g61030.1 |
score: 48.14 |
e-value: 4.2e-06 |
Identity: 28.21% |
Span: 234bp (35.2%) |
Frame: 2 |
| At5g61030.1 68412.m06929 RNA-binding protein, putative similar to RNA-binding protein from [Solanum tuberosum] GI:158... |
| Match: At4g19610.1 |
score: 48.14 |
e-value: 4.2e-06 |
Identity: 40.98% |
Span: 183bp (27.5%) |
Frame: 2 |
| At4g19610.1 68411.m02630 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g14100.1 |
score: 47.37 |
e-value: 7.2e-06 |
Identity: 28% |
Span: 225bp (33.8%) |
Frame: 2 |
| At3g14100.1 68410.m01599 oligouridylate binding protein (UBP1), putative similar to GB:CAB75429 (GI:6996560) from [Ni... |
| Match: At1g16610.1 |
score: 46.98 |
e-value: 9.4e-06 |
Identity: 22.22% |
Span: 417bp (62.7%) |
Frame: 2 |
| At1g16610.1 68408.m01794 arginine/serine-rich protein, putative similar to arginine/serine-rich protein GI:6601502 fr... |
| Match: At4g13850.1 |
score: 46.59 |
e-value: 1.2e-05 |
Identity: 30.77% |
Span: 234bp (35.2%) |
Frame: 2 |
| At4g13850.1 68411.m05250 glycine-rich RNA-binding protein (AtGRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabido... |
| Match: At3g20930.1 |
score: 46.59 |
e-value: 1.2e-05 |
Identity: 25.32% |
Span: 462bp (69.5%) |
Frame: 2 |
| At3g20930.1 68410.m02397 RNA recognition motif (RRM) - containing protein contains Pfam profile: PF00076 RNA recognit... |
| Match: At4g13850.2 |
score: 46.59 |
e-value: 1.2e-05 |
Identity: 30.77% |
Span: 234bp (35.2%) |
Frame: 2 |
| At4g13850.2 68411.m05251 glycine-rich RNA-binding protein (AtGRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabido... |
| Match: At1g07350.1 |
score: 45.82 |
e-value: 2.1e-05 |
Identity: 27.5% |
Span: 318bp (47.8%) |
Frame: 2 |
| At1g07350.1 68408.m00713 transformer serine/arginine-rich ribonucleoprotein, putative similar to GB:Y09506 from [Nico... |
| Match: At2g37220.1 |
score: 45.44 |
e-value: 2.7e-05 |
Identity: 29.79% |
Span: 282bp (42.4%) |
Frame: 2 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At2g36660.1 |
score: 45.05 |
e-value: 3.6e-05 |
Identity: 31.34% |
Span: 201bp (30.2%) |
Frame: 2 |
| At2g36660.1 68409.m04071 polyadenylate-binding protein (PABP), putative |
| Match: At1g07350.2 |
score: 45.05 |
e-value: 3.6e-05 |
Identity: 26.96% |
Span: 303bp (45.6%) |
Frame: 2 |
| At1g07350.2 68408.m00714 transformer serine/arginine-rich ribonucleoprotein, putative similar to GB:Y09506 from [Nico... |
| Match: At1g13690.1 |
score: 44.67 |
e-value: 4.7e-05 |
Identity: 30.14% |
Span: 219bp (32.9%) |
Frame: 2 |
| At1g13690.1 68408.m01457 AtE1 protein annotation temporarily based on supporting cDNA gi|1498063|gb|U64825.1|ATU64825 |
| Match: At1g54080.2 |
score: 44.28 |
e-value: 6.1e-05 |
Identity: 27.06% |
Span: 243bp (36.5%) |
Frame: 2 |
| At1g54080.2 68408.m08803 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein GI... |
| Match: At1g76460.1 |
score: 44.28 |
e-value: 6.1e-05 |
Identity: 41.07% |
Span: 168bp (25.3%) |
Frame: 2 |
| At1g76460.1 68408.m08164 RNA recognition motif (RRM) - containing protein low similarity to RRM-containing protein SE... |
| Match: At5g06210.1 |
score: 44.28 |
e-value: 6.1e-05 |
Identity: 28% |
Span: 225bp (33.8%) |
Frame: 2 |
| At5g06210.1 68412.m00645 RNA-binding protein, putative contains similarity to RNA-binding protein from [Nicotiana tab... |
| Match: At4g34110.1 |
score: 43.9 |
e-value: 8e-05 |
Identity: 33.85% |
Span: 195bp (29.3%) |
Frame: 2 |
| At4g34110.1 68411.m04401 polyadenylate-binding protein 2 (PABP2) non-consensus TA donor splice site at exon 2, polyad... |
| Match: At4g20030.1 |
score: 43.9 |
e-value: 8e-05 |
Identity: 33.33% |
Span: 225bp (33.8%) |
Frame: 2 |
| At4g20030.1 68411.m02674 RNA recognition motif (RRM) - containing protein low similarity to heterogeneous nuclear rib... |
| Match: At2g41060.1 |
score: 43.9 |
e-value: 8e-05 |
Identity: 35.59% |
Span: 177bp (26.6%) |
Frame: 2 |
| At2g41060.1 68409.m04594 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At1g71800.1 |
score: 43.9 |
e-value: 8e-05 |
Identity: 34.67% |
Span: 225bp (33.8%) |
Frame: 2 |
| At1g71800.1 68408.m07614 cleavage stimulation factor, putative similar to cleavage stimulation factor 64 kilodalton s... |
| Match: At3g47120.1 |
score: 43.51 |
e-value: 0.0001 |
Identity: 34.25% |
Span: 219bp (32.9%) |
Frame: 2 |
| At3g47120.1 68410.m04743 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At5g44200.1 |
score: 43.13 |
e-value: 0.00014 |
Identity: 30.86% |
Span: 237bp (35.6%) |
Frame: 2 |
| At5g44200.1 68412.m04876 nuclear cap binding protein, putative similar to SP|P52298 20 kDa nuclear cap binding protei... |
| Match: At1g48920.1 |
score: 42.74 |
e-value: 0.00018 |
Identity: 29% |
Span: 288bp (43.3%) |
Frame: 2 |
| At1g48920.1 68408.m05015 nucleolin, putative similar to nuM1 protein GI:1279562 from [Medicago sativa] |
| Match: At1g20880.1 |
score: 42.74 |
e-value: 0.00018 |
Identity: 39.29% |
Span: 168bp (25.3%) |
Frame: 2 |
| At1g20880.1 68408.m02361 RNA recognition motif (RRM) - containing protein similar to RRM-containing protein SEB-4 [Xe... |
| Match: At1g49760.1 |
score: 42.36 |
e-value: 0.00023 |
Identity: 33.85% |
Span: 195bp (29.3%) |
Frame: 2 |
| At1g49760.1 68408.m05111 polyadenylate-binding protein (PABP), putative similar to poly(A)-binding protein GB:AAF6682... |
| Match: At3g56860.1 |
score: 42.36 |
e-value: 0.00023 |
Identity: 35% |
Span: 240bp (36.1%) |
Frame: 2 |
| At3g56860.1 68410.m06940 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At3g56860.2 |
score: 42.36 |
e-value: 0.00023 |
Identity: 35% |
Span: 240bp (36.1%) |
Frame: 2 |
| At3g56860.2 68410.m06941 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At2g16260.1 |
score: 42.36 |
e-value: 0.00023 |
Identity: 32.26% |
Span: 186bp (28.0%) |
Frame: 2 |
| At2g16260.1 68409.m01674 glycine-rich RNA-binding protein, putative similar to Glycine-rich RNA-binding protein from ... |
| Match: At3g56860.3 |
score: 42.36 |
e-value: 0.00023 |
Identity: 35% |
Span: 240bp (36.1%) |
Frame: 2 |
| At3g56860.3 68410.m06942 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At2g46780.1 |
score: 41.97 |
e-value: 0.0003 |
Identity: 37.5% |
Span: 168bp (25.3%) |
Frame: 2 |
| At2g46780.1 68409.m05273 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At1g47490.1 |
score: 41.97 |
e-value: 0.0003 |
Identity: 26.51% |
Span: 249bp (37.4%) |
Frame: 2 |
| At1g47490.1 68408.m04830 RNA binding protein 47 (RBP47), putative similar to DNA binding protein GI:1899187 from [Nic... |
| Match: At3g13570.1 |
score: 41.97 |
e-value: 0.0003 |
Identity: 29.33% |
Span: 225bp (33.8%) |
Frame: 2 |
| At3g13570.1 68410.m01531 arginine/serine-rich splicing factor SCL30a almost identical to SC35-like splicing factor SC... |
| Match: At2g43370.1 |
score: 41.97 |
e-value: 0.0003 |
Identity: 33.78% |
Span: 222bp (33.4%) |
Frame: 2 |
| At2g43370.1 68409.m04872 U1 small nuclear ribonucleoprotein 70 kDa, putative |
| Match: At3g46020.1 |
score: 41.59 |
e-value: 0.0004 |
Identity: 29.33% |
Span: 225bp (33.8%) |
Frame: 2 |
| At3g46020.1 68410.m04612 RNA-binding protein, putative similar to Cold-inducible RNA-binding protein (Glycine-rich RN... |
| Match: At3g55460.1 |
score: 41.59 |
e-value: 0.0004 |
Identity: 28.95% |
Span: 219bp (32.9%) |
Frame: 2 |
| At3g55460.1 68410.m05688 arginine/serine-rich protein SCL30 Serine/arginine-rich protein/putative splicing factor, Ar... |
| Match: At2g19380.1 |
score: 40.82 |
e-value: 0.00067 |
Identity: 28.99% |
Span: 207bp (31.1%) |
Frame: 2 |
| At2g19380.1 68409.m02052 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At1g22330.1 |
score: 40.82 |
e-value: 0.00067 |
Identity: 35.09% |
Span: 171bp (25.7%) |
Frame: 2 |
| At1g22330.1 68408.m02526 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At1g78260.1 |
score: 40.43 |
e-value: 0.00088 |
Identity: 35.09% |
Span: 171bp (25.7%) |
Frame: 2 |
| At1g78260.1 68408.m08366 RNA recognition motif (RRM) - containing protein similar to RNA recognition motif-containing... |
| Match: At5g54900.1 |
score: 40.43 |
e-value: 0.00088 |
Identity: 26.67% |
Span: 441bp (66.3%) |
Frame: 2 |
| At5g54900.1 68412.m06186 RNA binding protein 45 (RBP45), putative contains similarity to polyadenylate-binding protei... |
| Match: At4g27000.1 |
score: 40.43 |
e-value: 0.00088 |
Identity: 28.57% |
Span: 231bp (34.7%) |
Frame: 2 |
| At4g27000.1 68411.m03536 RNA binding protein 45 (RBP45), putative DNA binding protein ACBF - Nicotiana tabacum, PID:g... |
| Match: At1g22760.1 |
score: 40.43 |
e-value: 0.00088 |
Identity: 28.79% |
Span: 198bp (29.8%) |
Frame: 2 |
| At1g22760.1 68408.m02574 polyadenylate-binding protein 3 (PABP3) |
| Match: At3g12640.1 |
score: 40.05 |
e-value: 0.001 |
Identity: 29.17% |
Span: 216bp (32.5%) |
Frame: 2 |
| At3g12640.1 68410.m01410 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At5g48650.1 |
score: 40.05 |
e-value: 0.001 |
Identity: 27.13% |
Span: 384bp (57.7%) |
Frame: 2 |
| At5g48650.1 68412.m05426 NTF2-containing RNA-binding protein, putative |
| Match: At5g19030.1 |
score: 40.05 |
e-value: 0.001 |
Identity: 29.03% |
Span: 186bp (28.0%) |
Frame: 2 |
| At5g19030.1 68412.m02073 RNA recognition motif (RRM) - containing protein low similarity to Cold-inducible RNA-bindin... |
| Match: At1g49760.1 |
score: 40.05 |
e-value: 0.001 |
Identity: 28.4% |
Span: 243bp (36.5%) |
Frame: 2 |
| At1g49760.1 68408.m05111 polyadenylate-binding protein (PABP), putative similar to poly(A)-binding protein GB:AAF6682... |
| Match: At3g54230.1 |
score: 40.05 |
e-value: 0.001 |
Identity: 23.01% |
Span: 333bp (50.1%) |
Frame: 2 |
| At3g54230.1 68410.m05544 RRM-containing protein KIAA0122 gene , Homo sapiens, EMBL:HSDKG02 |
| Match: At1g49600.1 |
score: 40.05 |
e-value: 0.001 |
Identity: 25.81% |
Span: 273bp (41.1%) |
Frame: 2 |
| At1g49600.1 68408.m05095 RNA binding protein 47 (RBP47), putative similar to DNA binding protein ACBF GB:U90212 GI:18... |
| Match: At4g25500.1 |
score: 40.05 |
e-value: 0.001 |
Identity: 23.28% |
Span: 348bp (52.3%) |
Frame: 2 |
| At4g25500.1 68411.m03344 arginine/serine-rich splicing factor RSp40 contains EST gb:T45156, H3766800 |
| Match: At1g47500.1 |
score: 40.05 |
e-value: 0.001 |
Identity: 21.68% |
Span: 351bp (52.8%) |
Frame: 2 |
| At1g47500.1 68408.m04832 RNA binding protein 47 (RBP47), putative similar to DNA binding protein GI:1899187 from [Nic... |
| Match: At5g54900.1 |
score: 39.66 |
e-value: 0.002 |
Identity: 27.27% |
Span: 231bp (34.7%) |
Frame: 2 |
| At5g54900.1 68412.m06186 RNA binding protein 45 (RBP45), putative contains similarity to polyadenylate-binding protei... |
| Match: At1g49760.1 |
score: 39.66 |
e-value: 0.002 |
Identity: 28.95% |
Span: 228bp (34.3%) |
Frame: 2 |
| At1g49760.1 68408.m05111 polyadenylate-binding protein (PABP), putative similar to poly(A)-binding protein GB:AAF6682... |
| Match: At1g03457.1 |
score: 39.66 |
e-value: 0.002 |
Identity: 28.12% |
Span: 192bp (28.9%) |
Frame: 2 |
| At1g03457.1 68408.m00292 RNA-binding protein, putative similar to Etr-1 [Danio rerio] GI:7670536, BRUNO-like 6 RNA-bi... |
| Match: At2g18510.1 |
score: 39.66 |
e-value: 0.002 |
Identity: 36.84% |
Span: 171bp (25.7%) |
Frame: 2 |
| At2g18510.1 68409.m01948 pre-mRNA splicing factor SF3b, putative |
| Match: At1g17640.1 |
score: 39.66 |
e-value: 0.002 |
Identity: 32.2% |
Span: 177bp (26.6%) |
Frame: 2 |
| At1g17640.1 68408.m01971 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At5g40490.1 |
score: 39.66 |
e-value: 0.002 |
Identity: 26.92% |
Span: 234bp (35.2%) |
Frame: 2 |
| At5g40490.1 68412.m04421 RNA recognition motif (RRM) - containing protein ribonucleoprotein, Xenopus laevis, PIR:S407... |
| Match: At1g48920.1 |
score: 39.28 |
e-value: 0.002 |
Identity: 23.08% |
Span: 468bp (70.4%) |
Frame: 2 |
| At1g48920.1 68408.m05015 nucleolin, putative similar to nuM1 protein GI:1279562 from [Medicago sativa] |
| Match: At3g56860.2 |
score: 39.28 |
e-value: 0.002 |
Identity: 32.2% |
Span: 177bp (26.6%) |
Frame: 2 |
| At3g56860.2 68410.m06941 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At3g56860.1 |
score: 39.28 |
e-value: 0.002 |
Identity: 32.2% |
Span: 177bp (26.6%) |
Frame: 2 |
| At3g56860.1 68410.m06940 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At3g53460.1 |
score: 39.28 |
e-value: 0.002 |
Identity: 31.82% |
Span: 198bp (29.8%) |
Frame: 2 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At1g02840.2 |
score: 39.28 |
e-value: 0.002 |
Identity: 28% |
Span: 225bp (33.8%) |
Frame: 2 |
| At1g02840.2 68408.m08867 pre-mRNA splicing factor SF2 (SR1 protein) |
| Match: At5g12190.1 |
score: 39.28 |
e-value: 0.002 |
Identity: 34% |
Span: 150bp (22.6%) |
Frame: 2 |
| At5g12190.1 68412.m01323 RNA recognition motif (RRM) - containing protein similar to SP|P52298 20 kDa nuclear cap bin... |
| Match: At1g02840.3 |
score: 39.28 |
e-value: 0.002 |
Identity: 28% |
Span: 225bp (33.8%) |
Frame: 2 |
| At1g02840.3 68408.m08868 pre-mRNA splicing factor SF2 (SR1 protein) |
| Match: At1g02840.1 |
score: 39.28 |
e-value: 0.002 |
Identity: 28% |
Span: 225bp (33.8%) |
Frame: 2 |
| At1g02840.1 68408.m08866 pre-mRNA splicing factor SF2 (SR1 protein) |
| Match: At5g51300.2 |
score: 39.28 |
e-value: 0.002 |
Identity: 34.55% |
Span: 165bp (24.8%) |
Frame: 2 |
| At5g51300.2 68412.m07949 splicing factor 1 (SF1), putative contains similarity to transcription or splicing factor |
| Match: At5g51300.1 |
score: 39.28 |
e-value: 0.002 |
Identity: 34.55% |
Span: 165bp (24.8%) |
Frame: 2 |
| At5g51300.1 68412.m07948 splicing factor 1 (SF1), putative contains similarity to transcription or splicing factor |
| Match: At5g03580.1 |
score: 39.28 |
e-value: 0.002 |
Identity: 32.05% |
Span: 234bp (35.2%) |
Frame: 2 |
| At5g03580.1 68412.m00293 polyadenylate-binding protein (poly(A)-binding protein), putative similar to poly(A)-binding... |
| Match: At3g53460.2 |
score: 39.28 |
e-value: 0.002 |
Identity: 31.82% |
Span: 198bp (29.8%) |
Frame: 2 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At4g10110.1 |
score: 39.28 |
e-value: 0.002 |
Identity: 35.09% |
Span: 171bp (25.7%) |
Frame: 2 |
| At4g10110.1 68411.m01492 RNA recognition motif (RRM) - containing protein contains INTERPRO:IPR000504 RNA-binding reg... |
| Match: At3g56860.3 |
score: 39.28 |
e-value: 0.002 |
Identity: 32.2% |
Span: 177bp (26.6%) |
Frame: 2 |
| At3g56860.3 68410.m06942 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At2g41060.1 |
score: 38.89 |
e-value: 0.003 |
Identity: 30.51% |
Span: 177bp (26.6%) |
Frame: 2 |
| At2g41060.1 68409.m04594 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At5g53680.1 |
score: 38.89 |
e-value: 0.003 |
Identity: 33.9% |
Span: 177bp (26.6%) |
Frame: 2 |
| At5g53680.1 68412.m06033 RNA recognition motif (RRM) - containing protein low similarity to RRM-containing protein SE... |
| Match: At2g43410.1 |
score: 38.89 |
e-value: 0.003 |
Identity: 28.18% |
Span: 330bp (49.6%) |
Frame: 2 |
| At2g43410.1 68409.m04876 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g18610.1 |
score: 38.89 |
e-value: 0.003 |
Identity: 28.89% |
Span: 342bp (51.4%) |
Frame: 2 |
| At3g18610.1 68410.m02135 nucleolin, putative contains Pfam profile: PF00076 RNA recognition motif |
| Match: At1g22910.1 |
score: 38.51 |
e-value: 0.003 |
Identity: 35.71% |
Span: 168bp (25.3%) |
Frame: 2 |
| At1g22910.1 68408.m02591 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At2g23350.1 |
score: 38.51 |
e-value: 0.003 |
Identity: 30.77% |
Span: 195bp (29.3%) |
Frame: 2 |
| At2g23350.1 68409.m02523 polyadenylate-binding protein (PABP), putative |
| Match: At2g21440.1 |
score: 38.51 |
e-value: 0.003 |
Identity: 25% |
Span: 264bp (39.7%) |
Frame: 2 |
| At2g21440.1 68409.m02310 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At4g02430.2 |
score: 38.51 |
e-value: 0.003 |
Identity: 28% |
Span: 225bp (33.8%) |
Frame: 2 |
| At4g02430.2 68411.m00301 arginine/serine-rich splicing factor (atSRp34), putative cDNA NCBI_gi:15810292 supports a tr... |
| Match: At4g02430.1 |
score: 38.51 |
e-value: 0.003 |
Identity: 28% |
Span: 225bp (33.8%) |
Frame: 2 |
| At4g02430.1 68411.m00300 arginine/serine-rich splicing factor (atSRp34), putative cDNA NCBI_gi:15810292 supports a tr... |
| Match: At2g22090.1 |
score: 38.51 |
e-value: 0.003 |
Identity: 29.85% |
Span: 201bp (30.2%) |
Frame: 2 |
| At2g22090.1 68409.m02377 UBP1 interacting protein, putative similar to UBP1 interacting protein 1a [Arabidopsis thali... |
| Match: At5g41690.1 |
score: 38.51 |
e-value: 0.003 |
Identity: 26.19% |
Span: 252bp (37.9%) |
Frame: 2 |
| At5g41690.1 68412.m04569 polyadenylate-binding protein (poly(A)-binding protein), putative similar to poly(A)-binding... |
| Match: At4g19610.1 |
score: 36.19 |
e-value: 0.017 |
Identity: 28.77% |
Span: 219bp (32.9%) |
Frame: 2 |
| At4g19610.1 68411.m02630 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At5g40490.1 |
score: 35.81 |
e-value: 0.022 |
Identity: 28.57% |
Span: 147bp (22.1%) |
Frame: 2 |
| At5g40490.1 68412.m04421 RNA recognition motif (RRM) - containing protein ribonucleoprotein, Xenopus laevis, PIR:S407... |
| Match: At4g27000.1 |
score: 35.81 |
e-value: 0.022 |
Identity: 28.79% |
Span: 192bp (28.9%) |
Frame: 2 |
| At4g27000.1 68411.m03536 RNA binding protein 45 (RBP45), putative DNA binding protein ACBF - Nicotiana tabacum, PID:g... |
| Match: At2g21440.1 |
score: 35.42 |
e-value: 0.028 |
Identity: 28.57% |
Span: 189bp (28.4%) |
Frame: 2 |
| At2g21440.1 68409.m02310 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g18610.1 |
score: 35.04 |
e-value: 0.037 |
Identity: 37.7% |
Span: 183bp (27.5%) |
Frame: 2 |
| At3g18610.1 68410.m02135 nucleolin, putative contains Pfam profile: PF00076 RNA recognition motif |
| Match: At1g47490.1 |
score: 35.04 |
e-value: 0.037 |
Identity: 26.14% |
Span: 249bp (37.4%) |
Frame: 2 |
| At1g47490.1 68408.m04830 RNA binding protein 47 (RBP47), putative similar to DNA binding protein GI:1899187 from [Nic... |
| Match: At5g41690.1 |
score: 33.88 |
e-value: 0.082 |
Identity: 22.83% |
Span: 276bp (41.5%) |
Frame: 2 |
| At5g41690.1 68412.m04569 polyadenylate-binding protein (poly(A)-binding protein), putative similar to poly(A)-binding... |
|
| 41 lower scoring hits censored -- only 100 best hits are stored. |
