| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|15225539|ref|NP_179011.1| |
score: 129.8 |
e-value: 5.2e-31 |
Identity: 50% |
Span: 498bp (74.7%) |
Frame: -2 |
| gi|15225539|ref|NP_179011.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301698|pir||C84512 pro... |
| Match: gi|15227813|ref|NP_179914.1| |
score: 127.9 |
e-value: 2.5e-30 |
Identity: 50% |
Span: 498bp (74.7%) |
Frame: -2 |
| gi|15227813|ref|NP_179914.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|7444418|pir||T00499 prob... |
| Match: gi|22655202|gb|AAM98191.1| |
score: 127.9 |
e-value: 2.5e-30 |
Identity: 50% |
Span: 498bp (74.7%) |
Frame: -2 |
| unknown protein [Arabidopsis thaliana] >gi38603804|gb|AAR24647.1| At2g23330 [Arabidopsis thaliana] >gi|110742535|dbj|... |
| Match: gi|22328565|ref|NP_680677.1| |
score: 122.9 |
e-value: 4.8e-32 |
Identity: 48.19% |
Span: 498bp (74.7%) |
Frame: -2 |
| gi|22328565|ref|NP_680677.1| polyprotein -related [Arabidopsis thaliana] |
| Match: gi|11358464|pir||T49111 |
score: 121.7 |
e-value: 9.4e-30 |
Identity: 47.59% |
Span: 498bp (74.7%) |
Frame: -2 |
| gi|11358464|pir||T49111 hypothetical retrovirus-related pol polyprotein AT4g22040 - Arabidopsis thaliana gi|2961349|e... |
| Match: gi|15223634|ref|NP_176077.1| |
score: 121.7 |
e-value: 9.4e-30 |
Identity: 48.19% |
Span: 498bp (74.7%) |
Frame: -2 |
| gi|15223634|ref|NP_176077.1| polyprotein -related [Arabidopsis thaliana] gi|25301686|pir||F96610 probable polyprotein... |
| Match: gi|15234694|ref|NP_193935.1| |
score: 121.7 |
e-value: 9.4e-30 |
Identity: 47.59% |
Span: 498bp (74.7%) |
Frame: -2 |
| gi|15234694|ref|NP_193935.1| LTR retrotransposon like protein [Arabidopsis thaliana] |
| Match: gi|9759493|dbj|BAB10743.1| |
score: 121.7 |
e-value: 9.4e-30 |
Identity: 48.19% |
Span: 498bp (74.7%) |
Frame: -2 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|15227276|ref|NP_179258.1| |
score: 120.6 |
e-value: 4.9e-28 |
Identity: 47.59% |
Span: 498bp (74.7%) |
Frame: -2 |
| gi|15227276|ref|NP_179258.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301700|pir||G84542 pro... |
| Match: gi|15223588|ref|NP_176060.1| |
score: 120.2 |
e-value: 6.4e-28 |
Identity: 46.39% |
Span: 498bp (74.7%) |
Frame: -2 |
| gi|15223588|ref|NP_176060.1| hypothetical protein [Arabidopsis thaliana] gi|25301685|pir||E96608 probable retroelemen... |
| Match: gi|8843739|dbj|BAA97287.1| |
score: 119.8 |
e-value: 1.7e-28 |
Identity: 47.59% |
Span: 498bp (74.7%) |
Frame: -2 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|15228727|ref|NP_188873.1| |
score: 118.6 |
e-value: 1.2e-26 |
Identity: 54.33% |
Span: 381bp (57.1%) |
Frame: -2 |
| gi|15228727|ref|NP_188873.1| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|25411253|pir||A84480 |
score: 118.2 |
e-value: 9.1e-26 |
Identity: 46.99% |
Span: 498bp (74.7%) |
Frame: -2 |
| gi|25411253|pir||A84480 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4063762|gb|AAC9846... |
| Match: gi|7487550|pir||T01956 |
score: 114.4 |
e-value: 1.3e-24 |
Identity: 42.72% |
Span: 609bp (91.3%) |
Frame: -2 |
| gi|7487550|pir||T01956 hypothetical protein T2L5.9 - Arabidopsis thaliana gi|3695393|gb|AAC62795.1| contains similari... |
| Match: gi|25405143|pir||F96501 |
score: 114 |
e-value: 1.7e-24 |
Identity: 46.25% |
Span: 480bp (72.0%) |
Frame: -2 |
| gi|25405143|pir||F96501 hypothetical protein F28H19.4 [imported] - Arabidopsis thaliana gi|7523671|gb|AAF63111.1| Sim... |
| Match: gi|15233456|ref|NP_193182.1| |
score: 113.2 |
e-value: 1.2e-25 |
Identity: 46.99% |
Span: 498bp (74.7%) |
Frame: -2 |
| gi|15233456|ref|NP_193182.1| retrovirus-related like polyprotein [Arabidopsis thaliana] gi|7488175|pir||G71406 probab... |
| Match: gi|9759590|dbj|BAB11447.1| |
score: 112.5 |
e-value: 5e-24 |
Identity: 48.75% |
Span: 480bp (72.0%) |
Frame: -2 |
| gi|9759590|dbj|BAB11447.1| polyprotein-like [Arabidopsis thaliana] |
| Match: gi|27573360|gb|AAO20078.1| |
score: 111.7 |
e-value: 8.5e-24 |
Identity: 43.9% |
Span: 492bp (73.8%) |
Frame: -2 |
| gi|27573360|gb|AAO20078.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15237009|ref|NP_192837.1| |
score: 110.9 |
e-value: 6.5e-24 |
Identity: 45.78% |
Span: 498bp (74.7%) |
Frame: -2 |
| gi|15237009|ref|NP_192837.1| retrotransposon polyprotein -related [Arabidopsis thaliana] gi|7486142|pir||T04294 hypot... |
| Match: gi|38345241|emb|CAD41085.2| |
score: 110.2 |
e-value: 2.5e-23 |
Identity: 44.51% |
Span: 492bp (73.8%) |
Frame: -2 |
| gi|38345241|emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|31249714|gb|AAP46207.1| |
score: 110.2 |
e-value: 2.5e-23 |
Identity: 44.51% |
Span: 492bp (73.8%) |
Frame: -2 |
| gi|31249714|gb|AAP46207.1| putative retrotransposon protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|18378607|gb|AAL68641.1| |
score: 107.5 |
e-value: 1.6e-22 |
Identity: 43.9% |
Span: 492bp (73.8%) |
Frame: -2 |
| gi|18378607|gb|AAL68641.1| polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|25301684|pir||F86470 |
score: 107.1 |
e-value: 4.1e-23 |
Identity: 45.62% |
Span: 480bp (72.0%) |
Frame: -2 |
| gi|25301684|pir||F86470 probable retroelement polyprotein [imported] - Arabidopsis thaliana gi|9989049|gb|AAG10812.1|... |
| Match: gi|37535486|ref|NP_922045.1| |
score: 106.7 |
e-value: 2.7e-22 |
Identity: 41.46% |
Span: 492bp (73.8%) |
Frame: -2 |
| gi|37535486|ref|NP_922045.1| putative copia-like polyprotein [Oryza sativa (japonica cultivar-group)] gi|22094347|gb|... |
| Match: gi|15218672|ref|NP_174714.1| |
score: 105.5 |
e-value: 6.1e-22 |
Identity: 45.78% |
Span: 498bp (74.7%) |
Frame: -2 |
| gi|15218672|ref|NP_174714.1| pol polyprotein -related [Arabidopsis thaliana] gi|25301710|pir||C86469 protein F12K21.1... |
| Match: gi|15222522|ref|NP_177159.1| |
score: 105.1 |
e-value: 8e-22 |
Identity: 42.39% |
Span: 549bp (82.3%) |
Frame: -2 |
| gi|15222522|ref|NP_177159.1| hypothetical protein [Arabidopsis thaliana] gi|25301690|pir||G96722 hypothetical protein... |
| Match: gi|12328472|dbj|BAB21132.1| |
score: 104.8 |
e-value: 4.4e-22 |
Identity: 43.29% |
Span: 492bp (73.8%) |
Frame: -2 |
| gi|12328472|dbj|BAB21132.1| putative gag/pol polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15225640|ref|NP_178718.1| |
score: 104.8 |
e-value: 5e-24 |
Identity: 50.39% |
Span: 381bp (57.1%) |
Frame: -2 |
| gi|15225640|ref|NP_178718.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301695|pir||D84481 pro... |
| Match: gi|15225357|ref|NP_179636.1| |
score: 104.4 |
e-value: 1.4e-21 |
Identity: 46.25% |
Span: 480bp (72.0%) |
Frame: -2 |
| gi|15225357|ref|NP_179636.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301701|pir||E84589 pro... |
| Match: gi|25301682|pir||G86301 |
score: 104.4 |
e-value: 1.4e-21 |
Identity: 41.38% |
Span: 522bp (78.3%) |
Frame: -2 |
| gi|25301682|pir||G86301 probable retroelement polyprotein [imported] - Arabidopsis thaliana gi|9989054|gb|AAG10817.1|... |
| Match: gi|22331571|ref|NP_683674.1| |
score: 103.2 |
e-value: 9.6e-22 |
Identity: 46.99% |
Span: 498bp (74.7%) |
Frame: -2 |
| gi|22331571|ref|NP_683674.1| retroelement pol polyprotein -related [Arabidopsis thaliana] |
| Match: gi|15226657|ref|NP_179198.1| |
score: 103.2 |
e-value: 3e-21 |
Identity: 46.88% |
Span: 480bp (72.0%) |
Frame: -2 |
| gi|15226657|ref|NP_179198.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301694|pir||E84535 pro... |
| Match: gi|10177485|dbj|BAB10876.1| |
score: 101.3 |
e-value: 2e-22 |
Identity: 42.68% |
Span: 492bp (73.8%) |
Frame: -2 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|32488892|emb|CAE03643.1| |
score: 99.37 |
e-value: 7.6e-22 |
Identity: 39.02% |
Span: 492bp (73.8%) |
Frame: -2 |
| gi|32488892|emb|CAE03643.1| OSJNBa0060N03.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38345742|emb|CAE04750.2| |
score: 99.37 |
e-value: 4.4e-20 |
Identity: 40.74% |
Span: 486bp (72.9%) |
Frame: -2 |
| gi|38345742|emb|CAE04750.2| OSJNBb0060E08.13 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|7488559|pir||T14518 |
score: 98.98 |
e-value: 5.7e-20 |
Identity: 46.88% |
Span: 480bp (72.0%) |
Frame: -2 |
| gi|7488559|pir||T14518 hypothetical protein 2 - wild cabbage transposon Melmoth gi|2462936|emb|CAA72990.1| unnamed pr... |
| Match: gi|30103001|gb|AAP21414.1| |
score: 98.98 |
e-value: 9.6e-22 |
Identity: 39.63% |
Span: 492bp (73.8%) |
Frame: -2 |
| putative polyprotein [Oryza sativa Japonica Group] >gi108711651|gb|ABF99446.1| retrotransposon protein, putative, unc... |
| Match: gi|15226638|ref|NP_179187.1| |
score: 98.21 |
e-value: 9.8e-20 |
Identity: 45.62% |
Span: 480bp (72.0%) |
Frame: -2 |
| gi|15226638|ref|NP_179187.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301676|pir||B84534 pro... |
| Match: gi|34914532|ref|NP_918613.1| |
score: 98.21 |
e-value: 2.1e-21 |
Identity: 39.63% |
Span: 492bp (73.8%) |
Frame: -2 |
| gi|34914532|ref|NP_918613.1| polyprotein [Oryza sativa (japonica cultivar-group)] gi|22093573|dbj|BAC06870.1| polypro... |
| Match: gi|15225537|ref|NP_179010.1| |
score: 98.21 |
e-value: 9.8e-20 |
Identity: 40.96% |
Span: 498bp (74.7%) |
Frame: -2 |
| gi|15225537|ref|NP_179010.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301697|pir||B84512 pro... |
| Match: gi|15224181|ref|NP_180042.1| |
score: 98.21 |
e-value: 4.4e-22 |
Identity: 42.17% |
Span: 498bp (74.7%) |
Frame: -2 |
| gi|15224181|ref|NP_180042.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301674|pir||D84639 pro... |
| Match: gi|15219464|ref|NP_174736.1| |
score: 97.44 |
e-value: 3e-20 |
Identity: 48.31% |
Span: 354bp (53.1%) |
Frame: -2 |
| gi|15219464|ref|NP_174736.1| retrofit -related [Arabidopsis thaliana] |
| Match: gi|34900938|ref|NP_911815.1| |
score: 96.29 |
e-value: 3.7e-19 |
Identity: 39.39% |
Span: 495bp (74.2%) |
Frame: -2 |
| gi|34900938|ref|NP_911815.1| gag/pol polyprotein-like [Oryza sativa (japonica cultivar-group)] |
| Match: gi|421955|pir||S25787 |
score: 95.9 |
e-value: 4.8e-19 |
Identity: 37.93% |
Span: 594bp (89.1%) |
Frame: -2 |
| gi|421955|pir||S25787 hypothetical protein 4 - potato transposon Tst1 gi|21434|emb|CAA36616.1| unnamed protein produc... |
| Match: gi|15236415|ref|NP_194047.1| |
score: 95.52 |
e-value: 6.3e-19 |
Identity: 42.69% |
Span: 513bp (76.9%) |
Frame: -2 |
| gi|15236415|ref|NP_194047.1| hypothetical protein [Arabidopsis thaliana] gi|7485945|pir||T04833 hypothetical protein ... |
| Match: gi|27901694|gb|AAO26683.1| |
score: 94.74 |
e-value: 2.8e-21 |
Identity: 38.41% |
Span: 492bp (73.8%) |
Frame: -2 |
| gi|27901694|gb|AAO26683.1| gag-pol polyprotein [Vitis vinifera] |
| Match: gi|7486705|pir||T01879 |
score: 93.59 |
e-value: 5e-20 |
Identity: 42.17% |
Span: 498bp (74.7%) |
Frame: -2 |
| gi|7486705|pir||T01879 hypothetical protein F8M12.17 - Arabidopsis thaliana gi|3513747|gb|AAC33963.1| contains simila... |
| Match: gi|27901696|gb|AAO26684.1| |
score: 93.2 |
e-value: 1.1e-20 |
Identity: 37.8% |
Span: 492bp (73.8%) |
Frame: -2 |
| gi|27901696|gb|AAO26684.1| gag-pol polyprotein [Vitis vinifera] |
| Match: gi|27901709|gb|AAO26690.1| |
score: 92.82 |
e-value: 1.4e-20 |
Identity: 37.8% |
Span: 492bp (73.8%) |
Frame: -2 |
| gi|27901709|gb|AAO26690.1| gag-pol polyprotein [Vitis vinifera] |
| Match: gi|2865424|gb|AAC02664.1| |
score: 92.82 |
e-value: 8.4e-20 |
Identity: 38.41% |
Span: 492bp (73.8%) |
Frame: -2 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|15236226|ref|NP_192205.1| |
score: 91.66 |
e-value: 5.3e-19 |
Identity: 39.63% |
Span: 492bp (73.8%) |
Frame: -2 |
| gi|15236226|ref|NP_192205.1| polyprotein of LTR transposon -related [Arabidopsis thaliana] gi|7444420|pir||T01397 LTR... |
| Match: gi|4996363|dbj|BAA78424.1| |
score: 91.66 |
e-value: 5.3e-19 |
Identity: 39.63% |
Span: 492bp (73.8%) |
Frame: -2 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|22325481|ref|NP_178559.2| |
score: 90.89 |
e-value: 7e-19 |
Identity: 40.24% |
Span: 492bp (73.8%) |
Frame: -2 |
| gi|22325481|ref|NP_178559.2| retroelement pol polyprotein -related [Arabidopsis thaliana] |
| Match: gi|25411120|pir||H84461 |
score: 90.89 |
e-value: 7e-19 |
Identity: 40.24% |
Span: 492bp (73.8%) |
Frame: -2 |
| gi|25411120|pir||H84461 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4544415|gb|AAD2232... |
| Match: gi|2865427|gb|AAC02666.1| |
score: 89.35 |
e-value: 8.9e-19 |
Identity: 37.8% |
Span: 492bp (73.8%) |
Frame: -2 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|15234775|ref|NP_193337.1| |
score: 88.97 |
e-value: 5.4e-19 |
Identity: 34.88% |
Span: 492bp (73.8%) |
Frame: -2 |
| gi|15234775|ref|NP_193337.1| retrotransposon like protein [Arabidopsis thaliana] gi|7485074|pir||C71426 hypothetical ... |
| Match: gi|25301688|pir||H96650 |
score: 83.57 |
e-value: 8.4e-20 |
Identity: 35.98% |
Span: 492bp (73.8%) |
Frame: -2 |
| gi|25301688|pir||H96650 protein T3P18.3 [imported] - Arabidopsis thaliana gi|5454189|gb|AAD43604.1| T3P18.3 [Arabidop... |
| Match: gi|27476074|gb|AAO17005.1| |
score: 83.57 |
e-value: 2.2e-20 |
Identity: 49.14% |
Span: 348bp (52.2%) |
Frame: -2 |
| gi|27476074|gb|AAO17005.1| Putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15220784|ref|NP_176436.1| |
score: 83.57 |
e-value: 8.4e-20 |
Identity: 35.98% |
Span: 492bp (73.8%) |
Frame: -2 |
| gi|15220784|ref|NP_176436.1| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|22328531|ref|NP_680671.1| |
score: 83.57 |
e-value: 8.4e-20 |
Identity: 35.98% |
Span: 492bp (73.8%) |
Frame: -2 |
| gi|22328531|ref|NP_680671.1| reverse transcriptase -related [Arabidopsis thaliana] gi|13872712|emb|CAC37623.1| copia-... |
| Match: gi|27476074|gb|AAO17005.1| |
score: 67.78 |
e-value: 1.4e-10 |
Identity: 36.25% |
Span: 477bp (71.5%) |
Frame: -2 |
| gi|27476074|gb|AAO17005.1| Putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|27476074|gb|AAO17005.1| |
score: 37.35 |
e-value: 2.2e-20 |
Identity: 42.5% |
Span: 120bp (18.0%) |
Frame: -1 |
| gi|27476074|gb|AAO17005.1| Putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|22328565|ref|NP_680677.1| |
score: 37.35 |
e-value: 4.8e-32 |
Identity: 45% |
Span: 120bp (18.0%) |
Frame: -1 |
| gi|22328565|ref|NP_680677.1| polyprotein -related [Arabidopsis thaliana] |
| Match: gi|25301688|pir||H96650 |
score: 35.42 |
e-value: 8.4e-20 |
Identity: 45% |
Span: 120bp (18.0%) |
Frame: -1 |
| gi|25301688|pir||H96650 protein T3P18.3 [imported] - Arabidopsis thaliana gi|5454189|gb|AAD43604.1| T3P18.3 [Arabidop... |
| Match: gi|22328531|ref|NP_680671.1| |
score: 35.42 |
e-value: 8.4e-20 |
Identity: 45% |
Span: 120bp (18.0%) |
Frame: -1 |
| gi|22328531|ref|NP_680671.1| reverse transcriptase -related [Arabidopsis thaliana] gi|13872712|emb|CAC37623.1| copia-... |
| Match: gi|15220784|ref|NP_176436.1| |
score: 35.42 |
e-value: 8.4e-20 |
Identity: 45% |
Span: 120bp (18.0%) |
Frame: -1 |
| gi|15220784|ref|NP_176436.1| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|11358464|pir||T49111 |
score: 30.8 |
e-value: 9.4e-30 |
Identity: 41.67% |
Span: 108bp (16.2%) |
Frame: -1 |
| gi|11358464|pir||T49111 hypothetical retrovirus-related pol polyprotein AT4g22040 - Arabidopsis thaliana gi|2961349|e... |
| Match: gi|15223634|ref|NP_176077.1| |
score: 30.8 |
e-value: 9.4e-30 |
Identity: 41.67% |
Span: 108bp (16.2%) |
Frame: -1 |
| gi|15223634|ref|NP_176077.1| polyprotein -related [Arabidopsis thaliana] gi|25301686|pir||F96610 probable polyprotein... |
| Match: gi|15234694|ref|NP_193935.1| |
score: 30.8 |
e-value: 9.4e-30 |
Identity: 41.67% |
Span: 108bp (16.2%) |
Frame: -1 |
| gi|15234694|ref|NP_193935.1| LTR retrotransposon like protein [Arabidopsis thaliana] |
| Match: gi|9759493|dbj|BAB10743.1| |
score: 30.8 |
e-value: 9.4e-30 |
Identity: 41.67% |
Span: 108bp (16.2%) |
Frame: -1 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|27901694|gb|AAO26683.1| |
score: 29.26 |
e-value: 2.8e-21 |
Identity: 40% |
Span: 105bp (15.7%) |
Frame: -1 |
| gi|27901694|gb|AAO26683.1| gag-pol polyprotein [Vitis vinifera] |
| Match: gi|27901709|gb|AAO26690.1| |
score: 28.88 |
e-value: 1.4e-20 |
Identity: 40% |
Span: 105bp (15.7%) |
Frame: -1 |
| gi|27901709|gb|AAO26690.1| gag-pol polyprotein [Vitis vinifera] |
| Match: gi|27901696|gb|AAO26684.1| |
score: 28.88 |
e-value: 1.1e-20 |
Identity: 40% |
Span: 105bp (15.7%) |
Frame: -1 |
| gi|27901696|gb|AAO26684.1| gag-pol polyprotein [Vitis vinifera] |
| Match: gi|15224181|ref|NP_180042.1| |
score: 28.49 |
e-value: 4.4e-22 |
Identity: 36.96% |
Span: 132bp (19.8%) |
Frame: -1 |
| gi|15224181|ref|NP_180042.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301674|pir||D84639 pro... |
| Match: gi|15225640|ref|NP_178718.1| |
score: 28.49 |
e-value: 5e-24 |
Identity: 38.89% |
Span: 108bp (16.2%) |
Frame: -1 |
| gi|15225640|ref|NP_178718.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301695|pir||D84481 pro... |
| Match: gi|8843739|dbj|BAA97287.1| |
score: 28.49 |
e-value: 1.7e-28 |
Identity: 38.89% |
Span: 108bp (16.2%) |
Frame: -1 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|15234775|ref|NP_193337.1| |
score: 27.34 |
e-value: 5.4e-19 |
Identity: 34.78% |
Span: 135bp (20.2%) |
Frame: -1 |
| gi|15234775|ref|NP_193337.1| retrotransposon like protein [Arabidopsis thaliana] gi|7485074|pir||C71426 hypothetical ... |
| Match: gi|15225539|ref|NP_179011.1| |
score: 26.95 |
e-value: 5.2e-31 |
Identity: 36.11% |
Span: 108bp (16.2%) |
Frame: -1 |
| gi|15225539|ref|NP_179011.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301698|pir||C84512 pro... |
| Match: gi|32488892|emb|CAE03643.1| |
score: 26.56 |
e-value: 7.6e-22 |
Identity: 30% |
Span: 120bp (18.0%) |
Frame: -1 |
| gi|32488892|emb|CAE03643.1| OSJNBa0060N03.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|22655202|gb|AAM98191.1| |
score: 26.56 |
e-value: 2.5e-30 |
Identity: 37.14% |
Span: 105bp (15.7%) |
Frame: -1 |
| unknown protein [Arabidopsis thaliana] >gi38603804|gb|AAR24647.1| At2g23330 [Arabidopsis thaliana] >gi|110742535|dbj|... |
| Match: gi|15227813|ref|NP_179914.1| |
score: 26.56 |
e-value: 2.5e-30 |
Identity: 37.14% |
Span: 105bp (15.7%) |
Frame: -1 |
| gi|15227813|ref|NP_179914.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|7444418|pir||T00499 prob... |
| Match: gi|30103001|gb|AAP21414.1| |
score: 26.56 |
e-value: 9.6e-22 |
Identity: 30% |
Span: 120bp (18.0%) |
Frame: -1 |
| putative polyprotein [Oryza sativa Japonica Group] >gi108711651|gb|ABF99446.1| retrotransposon protein, putative, unc... |
| Match: gi|10177485|dbj|BAB10876.1| |
score: 26.56 |
e-value: 2e-22 |
Identity: 34.15% |
Span: 123bp (18.4%) |
Frame: -1 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|7486705|pir||T01879 |
score: 26.18 |
e-value: 5e-20 |
Identity: 34.29% |
Span: 105bp (15.7%) |
Frame: -1 |
| gi|7486705|pir||T01879 hypothetical protein F8M12.17 - Arabidopsis thaliana gi|3513747|gb|AAC33963.1| contains simila... |
| Match: gi|34914532|ref|NP_918613.1| |
score: 26.18 |
e-value: 2.1e-21 |
Identity: 27.5% |
Span: 120bp (18.0%) |
Frame: -1 |
| gi|34914532|ref|NP_918613.1| polyprotein [Oryza sativa (japonica cultivar-group)] gi|22093573|dbj|BAC06870.1| polypro... |
| Match: gi|2865424|gb|AAC02664.1| |
score: 26.18 |
e-value: 8.4e-20 |
Identity: 31.71% |
Span: 123bp (18.4%) |
Frame: -1 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|2865427|gb|AAC02666.1| |
score: 26.18 |
e-value: 8.9e-19 |
Identity: 31.71% |
Span: 123bp (18.4%) |
Frame: -1 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|15223588|ref|NP_176060.1| |
score: 26.18 |
e-value: 6.4e-28 |
Identity: 36.11% |
Span: 108bp (16.2%) |
Frame: -1 |
| gi|15223588|ref|NP_176060.1| hypothetical protein [Arabidopsis thaliana] gi|25301685|pir||E96608 probable retroelemen... |
| Match: gi|15227276|ref|NP_179258.1| |
score: 26.18 |
e-value: 4.9e-28 |
Identity: 37.21% |
Span: 129bp (19.3%) |
Frame: -1 |
| gi|15227276|ref|NP_179258.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301700|pir||G84542 pro... |
| Match: gi|15233456|ref|NP_193182.1| |
score: 25.41 |
e-value: 1.2e-25 |
Identity: 40.62% |
Span: 93bp (13.9%) |
Frame: -1 |
| gi|15233456|ref|NP_193182.1| retrovirus-related like polyprotein [Arabidopsis thaliana] gi|7488175|pir||G71406 probab... |
| Match: gi|22325481|ref|NP_178559.2| |
score: 25.02 |
e-value: 7e-19 |
Identity: 32.5% |
Span: 120bp (18.0%) |
Frame: -1 |
| gi|22325481|ref|NP_178559.2| retroelement pol polyprotein -related [Arabidopsis thaliana] |
| Match: gi|25411120|pir||H84461 |
score: 25.02 |
e-value: 7e-19 |
Identity: 32.5% |
Span: 120bp (18.0%) |
Frame: -1 |
| gi|25411120|pir||H84461 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4544415|gb|AAD2232... |
| Match: gi|4996363|dbj|BAA78424.1| |
score: 24.64 |
e-value: 5.3e-19 |
Identity: 28.26% |
Span: 138bp (20.7%) |
Frame: -1 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|15236226|ref|NP_192205.1| |
score: 24.64 |
e-value: 5.3e-19 |
Identity: 28.26% |
Span: 138bp (20.7%) |
Frame: -1 |
| gi|15236226|ref|NP_192205.1| polyprotein of LTR transposon -related [Arabidopsis thaliana] gi|7444420|pir||T01397 LTR... |
| Match: gi|15228727|ref|NP_188873.1| |
score: 23.48 |
e-value: 1.2e-26 |
Identity: 45.45% |
Span: 66bp (9.9%) |
Frame: -1 |
| gi|15228727|ref|NP_188873.1| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|15219464|ref|NP_174736.1| |
score: 23.1 |
e-value: 3e-20 |
Identity: 36.96% |
Span: 138bp (20.7%) |
Frame: -1 |
| gi|15219464|ref|NP_174736.1| retrofit -related [Arabidopsis thaliana] |
| Match: gi|25301684|pir||F86470 |
score: 23.1 |
e-value: 4.1e-23 |
Identity: 36.96% |
Span: 138bp (20.7%) |
Frame: -1 |
| gi|25301684|pir||F86470 probable retroelement polyprotein [imported] - Arabidopsis thaliana gi|9989049|gb|AAG10812.1|... |
| Match: gi|22331571|ref|NP_683674.1| |
score: 22.33 |
e-value: 9.6e-22 |
Identity: 29.73% |
Span: 111bp (16.6%) |
Frame: -1 |
| gi|22331571|ref|NP_683674.1| retroelement pol polyprotein -related [Arabidopsis thaliana] |
| Match: gi|15237009|ref|NP_192837.1| |
score: 21.94 |
e-value: 6.5e-24 |
Identity: 43.48% |
Span: 69bp (10.3%) |
Frame: -1 |
| gi|15237009|ref|NP_192837.1| retrotransposon polyprotein -related [Arabidopsis thaliana] gi|7486142|pir||T04294 hypot... |
| Match: gi|12328472|dbj|BAB21132.1| |
score: 21.94 |
e-value: 4.4e-22 |
Identity: 40.91% |
Span: 66bp (9.9%) |
Frame: -1 |
| gi|12328472|dbj|BAB21132.1| putative gag/pol polyprotein [Oryza sativa (japonica cultivar-group)] |
|
| 283 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 100 hits recorded |
| Match: At2g13940.1 |
score: 129.8 |
e-value: 1.9e-32 |
Identity: 50% |
Span: 498bp (74.7%) |
Frame: -2 |
| At2g13940.1 68409.m01403 retroelement pol polyprotein -related contains a Zn-finger CCHC type domain (prosite:QDOC501... |
| Match: At2g23330.1 |
score: 127.9 |
e-value: 9.1e-32 |
Identity: 50% |
Span: 498bp (74.7%) |
Frame: -2 |
| At2g23330.1 68409.m02521 retroelement pol polyprotein -related |
| Match: At4g11375.1 |
score: 122.9 |
e-value: 1.7e-33 |
Identity: 48.19% |
Span: 498bp (74.7%) |
Frame: -2 |
| At4g11375.1 68411.m01659 polyprotein -related temporary automated functional assignment |
| Match: At4g22040.1 |
score: 121.7 |
e-value: 3.4e-31 |
Identity: 47.59% |
Span: 498bp (74.7%) |
Frame: -2 |
| At4g22040.1 68411.m02915 LTR retrotransposon like protein retrovirus-related polyprotein, fruit fly, transposon copia |
| Match: At1g57640.1 |
score: 121.7 |
e-value: 3.4e-31 |
Identity: 48.19% |
Span: 498bp (74.7%) |
Frame: -2 |
| At1g57640.1 68408.m05995 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At2g16670.1 |
score: 120.6 |
e-value: 1.8e-29 |
Identity: 47.59% |
Span: 498bp (74.7%) |
Frame: -2 |
| At2g16670.1 68409.m01723 retroelement pol polyprotein -related |
| Match: At1g56675.1 |
score: 120.2 |
e-value: 2.3e-29 |
Identity: 46.39% |
Span: 498bp (74.7%) |
Frame: -2 |
| At1g56675.1 68408.m05976 hypothetical protein similar to putative retroelement pol polyprotein GI:6850344 from [Arabi... |
| Match: At3g22340.1 |
score: 118.6 |
e-value: 4.4e-28 |
Identity: 54.33% |
Span: 381bp (57.1%) |
Frame: -2 |
| At3g22340.1 68410.m02562 hypothetical protein similar to a region of polyprotein GB:AAC02666 from [Arabidopsis thali... |
| Match: At4g14460.1 |
score: 113.2 |
e-value: 4.5e-27 |
Identity: 46.99% |
Span: 498bp (74.7%) |
Frame: -2 |
| At4g14460.1 68411.m02019 retrovirus-related like polyprotein |
| Match: At4g10990.1 |
score: 110.9 |
e-value: 2.4e-25 |
Identity: 45.78% |
Span: 498bp (74.7%) |
Frame: -2 |
| At4g10990.1 68411.m01615 retrotransposon polyprotein -related various predicted LTR retrotransposons, Arabidopsisthal... |
| Match: At1g34545.1 |
score: 105.5 |
e-value: 2.2e-23 |
Identity: 45.78% |
Span: 498bp (74.7%) |
Frame: -2 |
| At1g34545.1 68408.m03897 pol polyprotein -related similar to many predicted pol polyproteins |
| Match: At1g70010.1 |
score: 105.1 |
e-value: 2.9e-23 |
Identity: 42.39% |
Span: 549bp (82.3%) |
Frame: -2 |
| At1g70010.1 68408.m07390 hypothetical protein similar to putative retroelement pol polyprotein GI:4678197 from [Arabi... |
| Match: At2g07010.1 |
score: 104.8 |
e-value: 1.8e-25 |
Identity: 50.39% |
Span: 381bp (57.1%) |
Frame: -2 |
| At2g07010.1 68409.m00716 retroelement pol polyprotein -related |
| Match: At2g20460.1 |
score: 104.4 |
e-value: 5e-23 |
Identity: 46.25% |
Span: 480bp (72.0%) |
Frame: -2 |
| At2g20460.1 68409.m02171 retroelement pol polyprotein -related |
| Match: At2g16000.1 |
score: 103.2 |
e-value: 1.1e-22 |
Identity: 46.88% |
Span: 480bp (72.0%) |
Frame: -2 |
| At2g16000.1 68409.m01646 retroelement pol polyprotein -related |
| Match: At3g43955.1 |
score: 103.2 |
e-value: 3.5e-23 |
Identity: 46.99% |
Span: 498bp (74.7%) |
Frame: -2 |
| At3g43955.1 68410.m04359 retroelement pol polyprotein -related temporary automated functional assignment |
| Match: At2g24660.1 |
score: 98.21 |
e-value: 1.6e-23 |
Identity: 42.17% |
Span: 498bp (74.7%) |
Frame: -2 |
| At2g24660.1 68409.m02666 retroelement pol polyprotein -related |
| Match: At2g13930.1 |
score: 98.21 |
e-value: 3.6e-21 |
Identity: 40.96% |
Span: 498bp (74.7%) |
Frame: -2 |
| At2g13930.1 68409.m01402 retroelement pol polyprotein -related contains a Zn-finger CCHC type domain (prosite:QDOC501... |
| Match: At2g15870.1 |
score: 98.21 |
e-value: 3.6e-21 |
Identity: 45.62% |
Span: 480bp (72.0%) |
Frame: -2 |
| At2g15870.1 68409.m01633 retroelement pol polyprotein -related contains signature integrase DDE motif |
| Match: At1g34904.1 |
score: 97.44 |
e-value: 1.1e-21 |
Identity: 48.31% |
Span: 354bp (53.1%) |
Frame: -2 |
| At1g34904.1 68408.m03937 retrofit -related similar to retrofit GI:2586082 from [Oryza longistaminata] |
| Match: At4g23160.1 |
score: 95.52 |
e-value: 2.3e-20 |
Identity: 42.69% |
Span: 513bp (76.9%) |
Frame: -2 |
| At4g23160.1 68411.m03051 hypothetical protein copia-like retrotransposon Hopscotch polyprotein, Zea mays |
| Match: At4g19780.1 |
score: 93.2 |
e-value: 1.1e-19 |
Identity: 42.5% |
Span: 480bp (72.0%) |
Frame: -2 |
| At4g19780.1 68411.m02649 LTR retrotransposon -related Brassica oleracea SLG-Sc and SLA-Sc genes and Melmoth retrotra... |
| Match: At4g02960.1 |
score: 91.66 |
e-value: 1.9e-20 |
Identity: 39.63% |
Span: 492bp (73.8%) |
Frame: -2 |
| At4g02960.1 68411.m00365 polyprotein of LTR transposon -related similar to A. thaliana polyprotein, GenBank accession... |
| Match: At1g31210.1 |
score: 91.66 |
e-value: 3.3e-19 |
Identity: 37.8% |
Span: 492bp (73.8%) |
Frame: -2 |
| At1g31210.1 68408.m03460 reverse transcriptase -related strong similarity to a multitude of putative reverse transcri... |
| Match: At2g04820.1 |
score: 90.89 |
e-value: 2.5e-20 |
Identity: 40.24% |
Span: 492bp (73.8%) |
Frame: -2 |
| At2g04820.1 68409.m00443 retroelement pol polyprotein -related |
| Match: At1g58889.1 |
score: 90.89 |
e-value: 7.1e-20 |
Identity: 39.02% |
Span: 492bp (73.8%) |
Frame: -2 |
| At1g58889.1 68408.m06107 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At1g59265.1 |
score: 90.89 |
e-value: 7.1e-20 |
Identity: 39.02% |
Span: 492bp (73.8%) |
Frame: -2 |
| At1g59265.1 68408.m06119 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At4g17450.1 |
score: 89.74 |
e-value: 1.3e-18 |
Identity: 41.25% |
Span: 480bp (72.0%) |
Frame: -2 |
| At4g17450.1 68411.m02377 retrotransposon like protein |
| Match: At1g47360.1 |
score: 89.74 |
e-value: 1.3e-18 |
Identity: 38.55% |
Span: 498bp (74.7%) |
Frame: -2 |
| At1g47360.1 68408.m04804 polyprotein -related similar to polyprotein GB:CAA31653 GI:16534 from [Arabidopsis thaliana] |
| Match: At4g16020.1 |
score: 88.97 |
e-value: 2e-20 |
Identity: 34.88% |
Span: 492bp (73.8%) |
Frame: -2 |
| At4g16020.1 68411.m02210 retrotransposon like protein |
| Match: At1g27285.1 |
score: 87.81 |
e-value: 5.8e-19 |
Identity: 38.32% |
Span: 498bp (74.7%) |
Frame: -2 |
| At1g27285.1 68408.m03015 polyprotein -related similar to GB:AAC02666 |
| Match: At1g37110.1 |
score: 87.81 |
e-value: 4.8e-18 |
Identity: 32.53% |
Span: 498bp (74.7%) |
Frame: -2 |
| At1g37110.1 68408.m04221 polyprotein -related similar to polyprotein GI:16534 from [Arabidopsis thaliana] |
| Match: At1g21945.1 |
score: 87.04 |
e-value: 8.2e-18 |
Identity: 36.59% |
Span: 492bp (73.8%) |
Frame: -2 |
| At1g21945.1 68408.m02483 polyprotein -related similar to gag-pol polyprotein GB:AAC64917 GI:3777527 from [Glycine max] |
| Match: At5g13205.1 |
score: 86.66 |
e-value: 1.1e-17 |
Identity: 36.59% |
Span: 492bp (73.8%) |
Frame: -2 |
| At5g13205.1 68412.m01398 copia-type polyprotein -related temporary automated functional assignment |
| Match: At1g58140.1 |
score: 86.66 |
e-value: 1.1e-17 |
Identity: 36.59% |
Span: 492bp (73.8%) |
Frame: -2 |
| At1g58140.1 68408.m06045 copia-type polyprotein -related similar to copia-type polyprotein GI:6850900 from (Arabidops... |
| Match: At1g11265.1 |
score: 86.66 |
e-value: 1.1e-17 |
Identity: 36.59% |
Span: 492bp (73.8%) |
Frame: -2 |
| At1g11265.1 68408.m01163 copia-type polyprotein identical to copia-type polyprotein GB:CAB71063 GI:6850900 from [Arab... |
| Match: At3g61330.1 |
score: 86.66 |
e-value: 1.1e-17 |
Identity: 36.59% |
Span: 492bp (73.8%) |
Frame: -2 |
| At3g61330.1 68410.m06339 copia-type polyprotein copia polyprotein - Drosophila melanogaster, PIR:OFFFCP |
| Match: At1g48710.1 |
score: 86.27 |
e-value: 1.4e-17 |
Identity: 36.59% |
Span: 492bp (73.8%) |
Frame: -2 |
| At1g48710.1 68408.m04991 copia-type polyprotein -related similar to copia-type polyprotein GI:6850900 from [Arabidops... |
| Match: At2g21460.1 |
score: 85.89 |
e-value: 1.8e-17 |
Identity: 36.14% |
Span: 498bp (74.7%) |
Frame: -2 |
| At2g21460.1 68409.m02312 retroelement pol polyprotein -related |
| Match: At2g07550.1 |
score: 84.34 |
e-value: 5.3e-17 |
Identity: 36.59% |
Span: 492bp (73.8%) |
Frame: -2 |
| At2g07550.1 68409.m00781 retroelement pol polyprotein -related |
| Match: At2g15920.1 |
score: 83.57 |
e-value: 9.1e-17 |
Identity: 45.52% |
Span: 435bp (65.2%) |
Frame: -2 |
| At2g15920.1 68409.m01638 retroelement pol polyprotein -related contains a CCHC-type Zn-finger |
| Match: At4g09455.1 |
score: 83.57 |
e-value: 3e-21 |
Identity: 35.98% |
Span: 492bp (73.8%) |
Frame: -2 |
| At4g09455.1 68411.m01404 reverse transcriptase -related temporary automated functional assignment |
| Match: At1g62460.1 |
score: 83.57 |
e-value: 3.1e-21 |
Identity: 35.98% |
Span: 492bp (73.8%) |
Frame: -2 |
| At1g62460.1 68408.m06464 hypothetical protein |
| Match: At1g44510.1 |
score: 82.8 |
e-value: 7.5e-19 |
Identity: 39.76% |
Span: 492bp (73.8%) |
Frame: -2 |
| At1g44510.1 68408.m04686 polyprotein -related similar to polyprotein GI:4996367 from [Arabidopsis thaliana] |
| Match: At5g35820.1 |
score: 82.8 |
e-value: 1.5e-16 |
Identity: 35.15% |
Span: 495bp (74.2%) |
Frame: -2 |
| At5g35820.1 68412.m03867 copia-related retrotransposable element |
| Match: At2g15700.1 |
score: 82.42 |
e-value: 2e-16 |
Identity: 36.42% |
Span: 486bp (72.9%) |
Frame: -2 |
| At2g15700.1 68409.m01612 copia-related retroelement pol polyprotein |
| Match: At4g27200.1 |
score: 80.11 |
e-value: 4.8e-18 |
Identity: 36.97% |
Span: 492bp (73.8%) |
Frame: -2 |
| At4g27200.1 68411.m03556 hypothetical protein retrotransposon Opie-2, Zea mays, PID:g1657768 |
| Match: At4g27210.1 |
score: 80.11 |
e-value: 2.8e-18 |
Identity: 36.97% |
Span: 492bp (73.8%) |
Frame: -2 |
| At4g27210.1 68411.m03557 hypothetical protein Hopscotch retrotransposon, Zea mays, PID:g531389 |
| Match: At3g45520.1 |
score: 79.72 |
e-value: 1.3e-15 |
Identity: 34.76% |
Span: 492bp (73.8%) |
Frame: -2 |
| At3g45520.1 68410.m04552 copia-related polyprotein COPIA PROTEIN - Drosophila melanogaster, SWISSPROT:COPI_DROME |
| Match: At4g21360.1 |
score: 79.34 |
e-value: 1.7e-15 |
Identity: 43.48% |
Span: 345bp (51.7%) |
Frame: -2 |
| At4g21360.1 68411.m02820 transposable element -related reverse transcriptase (copia-like retrotransposon), Nicotiana ... |
| Match: At4g16870.1 |
score: 77.8 |
e-value: 2.4e-16 |
Identity: 37.2% |
Span: 492bp (73.8%) |
Frame: -2 |
| At4g16870.1 68411.m02317 retrotransposon like protein |
| Match: At2g15650.1 |
score: 77.41 |
e-value: 1.8e-17 |
Identity: 35.76% |
Span: 495bp (74.2%) |
Frame: -2 |
| At2g15650.1 68409.m01606 retroelement pol polyprotein -related |
| Match: At1g34090.1 |
score: 77.41 |
e-value: 3.9e-17 |
Identity: 34.76% |
Span: 492bp (73.8%) |
Frame: -2 |
| At1g34090.1 68408.m03835 polyprotein -related similar to polyprotein GI:4996361 from [Arabidopsis thaliana] |
| Match: At1g53810.1 |
score: 76.26 |
e-value: 1.3e-18 |
Identity: 32.94% |
Span: 492bp (73.8%) |
Frame: -2 |
| At1g53810.1 68408.m05618 hypothetical protein similar to putative retroelement pol polyprotein GI:3779021 from [Arabi... |
| Match: At3g29775.1 |
score: 75.48 |
e-value: 1.9e-16 |
Identity: 33.33% |
Span: 495bp (74.2%) |
Frame: -2 |
| At3g29775.1 68410.m03476 Ty1/Copia-type retroelement polyprotein similar to gag-pol polyprotein GB:AAC64917 GI:377752... |
| Match: At3g60170.1 |
score: 73.17 |
e-value: 7.2e-15 |
Identity: 33.93% |
Span: 498bp (74.7%) |
Frame: -2 |
| At3g60170.1 68410.m06211 hypothetical protein several retrotransposon polyproteins |
| Match: At4g09425.1 |
score: 72.4 |
e-value: 2.1e-13 |
Identity: 41.96% |
Span: 336bp (50.4%) |
Frame: -2 |
| At4g09425.1 68411.m01400 retroelement pol polyprotein -related temporary automated functional assignment |
| Match: At4g10690.1 |
score: 72.02 |
e-value: 2.7e-13 |
Identity: 32.32% |
Span: 492bp (73.8%) |
Frame: -2 |
| At4g10690.1 68411.m01580 retrotransposon like protein copia-like retrotransposon Hopscotch polyprotein - Zea mays,PID... |
| Match: At1g32590.1 |
score: 71.25 |
e-value: 4.7e-13 |
Identity: 34.76% |
Span: 492bp (73.8%) |
Frame: -2 |
| At1g32590.1 68408.m03642 copia-type polyprotein -related similar to GI:6850900 from [Arabidopsis thaliana] |
| Match: At4g04440.1 |
score: 70.09 |
e-value: 1e-12 |
Identity: 37.17% |
Span: 339bp (50.8%) |
Frame: -2 |
| At4g04440.1 68411.m00566 transposon protein -related |
| Match: At2g21310.1 |
score: 70.09 |
e-value: 1e-12 |
Identity: 32.34% |
Span: 501bp (75.1%) |
Frame: -2 |
| At2g21310.1 68409.m02297 retroelement pol polyprotein -related |
| Match: At4g10460.1 |
score: 70.09 |
e-value: 1e-12 |
Identity: 38.6% |
Span: 342bp (51.3%) |
Frame: -2 |
| At4g10460.1 68411.m01552 retrotransposon -related Oryza australiensis retrotransposon RIRE1, PID:d1023151 |
| Match: At3g43688.1 |
score: 68.94 |
e-value: 2.3e-12 |
Identity: 32.02% |
Span: 534bp (80.1%) |
Frame: -2 |
| At3g43688.1 68410.m04323 retroelement pol polyprotein-related similar to gag-pol polyprotein [Glycine max] gi|3777527... |
| Match: At3g25450.1 |
score: 68.94 |
e-value: 2.3e-12 |
Identity: 30.49% |
Span: 492bp (73.8%) |
Frame: -2 |
| At3g25450.1 68410.m02895 hypothetical protein contains similarity to retrovirus-related pol polyprotein from transpos... |
| Match: At4g28900.1 |
score: 67.4 |
e-value: 6.5e-17 |
Identity: 32.23% |
Span: 363bp (54.4%) |
Frame: -2 |
| At4g28900.1 68411.m03763 expressed protein retrofit - Oryza longistaminata, PID:g2586082 |
| Match: At1g33817.1 |
score: 64.7 |
e-value: 1.4e-11 |
Identity: 32.12% |
Span: 492bp (73.8%) |
Frame: -2 |
| At1g33817.1 68408.m03793 hypothetical protein similar C-term of gag-pol polyprotein GB:AAC64917 (Glycine max); contai... |
| Match: At4g10690.1 |
score: 38.51 |
e-value: 0.003 |
Identity: 35.14% |
Span: 219bp (32.8%) |
Frame: -1 |
| At4g10690.1 68411.m01580 retrotransposon like protein copia-like retrotransposon Hopscotch polyprotein - Zea mays,PID... |
| Match: At4g11375.1 |
score: 37.35 |
e-value: 1.7e-33 |
Identity: 45% |
Span: 120bp (18.0%) |
Frame: -1 |
| At4g11375.1 68411.m01659 polyprotein -related temporary automated functional assignment |
| Match: At4g28900.1 |
score: 36.96 |
e-value: 6.5e-17 |
Identity: 44.68% |
Span: 138bp (20.7%) |
Frame: -1 |
| At4g28900.1 68411.m03763 expressed protein retrofit - Oryza longistaminata, PID:g2586082 |
| Match: At1g31210.1 |
score: 35.81 |
e-value: 0.022 |
Identity: 34.21% |
Span: 225bp (33.7%) |
Frame: -1 |
| At1g31210.1 68408.m03460 reverse transcriptase -related strong similarity to a multitude of putative reverse transcri... |
| Match: At1g62460.1 |
score: 35.42 |
e-value: 3.1e-21 |
Identity: 45% |
Span: 120bp (18.0%) |
Frame: -1 |
| At1g62460.1 68408.m06464 hypothetical protein |
| Match: At4g09455.1 |
score: 35.42 |
e-value: 3e-21 |
Identity: 45% |
Span: 120bp (18.0%) |
Frame: -1 |
| At4g09455.1 68411.m01404 reverse transcriptase -related temporary automated functional assignment |
| Match: At1g53810.1 |
score: 33.88 |
e-value: 1.3e-18 |
Identity: 41.86% |
Span: 126bp (18.9%) |
Frame: -1 |
| At1g53810.1 68408.m05618 hypothetical protein similar to putative retroelement pol polyprotein GI:3779021 from [Arabi... |
| Match: At1g57640.1 |
score: 30.8 |
e-value: 3.4e-31 |
Identity: 41.67% |
Span: 108bp (16.2%) |
Frame: -1 |
| At1g57640.1 68408.m05995 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At4g22040.1 |
score: 30.8 |
e-value: 3.4e-31 |
Identity: 41.67% |
Span: 108bp (16.2%) |
Frame: -1 |
| At4g22040.1 68411.m02915 LTR retrotransposon like protein retrovirus-related polyprotein, fruit fly, transposon copia |
| Match: At2g15650.1 |
score: 28.88 |
e-value: 1.8e-17 |
Identity: 42.11% |
Span: 114bp (17.1%) |
Frame: -1 |
| At2g15650.1 68409.m01606 retroelement pol polyprotein -related |
| Match: At4g27210.1 |
score: 28.88 |
e-value: 2.8e-18 |
Identity: 44.19% |
Span: 123bp (18.4%) |
Frame: -1 |
| At4g27210.1 68411.m03557 hypothetical protein Hopscotch retrotransposon, Zea mays, PID:g531389 |
| Match: At2g24660.1 |
score: 28.49 |
e-value: 1.6e-23 |
Identity: 36.96% |
Span: 132bp (19.8%) |
Frame: -1 |
| At2g24660.1 68409.m02666 retroelement pol polyprotein -related |
| Match: At2g07010.1 |
score: 28.49 |
e-value: 1.8e-25 |
Identity: 38.89% |
Span: 108bp (16.2%) |
Frame: -1 |
| At2g07010.1 68409.m00716 retroelement pol polyprotein -related |
| Match: At1g44510.1 |
score: 28.11 |
e-value: 7.5e-19 |
Identity: 39.47% |
Span: 114bp (17.1%) |
Frame: -1 |
| At1g44510.1 68408.m04686 polyprotein -related similar to polyprotein GI:4996367 from [Arabidopsis thaliana] |
| Match: At4g27200.1 |
score: 28.11 |
e-value: 4.8e-18 |
Identity: 38.1% |
Span: 123bp (18.4%) |
Frame: -1 |
| At4g27200.1 68411.m03556 hypothetical protein retrotransposon Opie-2, Zea mays, PID:g1657768 |
| Match: At1g34090.1 |
score: 27.72 |
e-value: 3.9e-17 |
Identity: 38.24% |
Span: 102bp (15.3%) |
Frame: -1 |
| At1g34090.1 68408.m03835 polyprotein -related similar to polyprotein GI:4996361 from [Arabidopsis thaliana] |
| Match: At3g29775.1 |
score: 27.34 |
e-value: 1.9e-16 |
Identity: 32.5% |
Span: 120bp (18.0%) |
Frame: -1 |
| At3g29775.1 68410.m03476 Ty1/Copia-type retroelement polyprotein similar to gag-pol polyprotein GB:AAC64917 GI:377752... |
| Match: At4g16020.1 |
score: 27.34 |
e-value: 2e-20 |
Identity: 34.78% |
Span: 135bp (20.2%) |
Frame: -1 |
| At4g16020.1 68411.m02210 retrotransposon like protein |
| Match: At2g13940.1 |
score: 26.95 |
e-value: 1.9e-32 |
Identity: 36.11% |
Span: 108bp (16.2%) |
Frame: -1 |
| At2g13940.1 68409.m01403 retroelement pol polyprotein -related contains a Zn-finger CCHC type domain (prosite:QDOC501... |
| Match: At2g23330.1 |
score: 26.56 |
e-value: 9.1e-32 |
Identity: 37.14% |
Span: 105bp (15.7%) |
Frame: -1 |
| At2g23330.1 68409.m02521 retroelement pol polyprotein -related |
| Match: At1g56675.1 |
score: 26.18 |
e-value: 2.3e-29 |
Identity: 36.11% |
Span: 108bp (16.2%) |
Frame: -1 |
| At1g56675.1 68408.m05976 hypothetical protein similar to putative retroelement pol polyprotein GI:6850344 from [Arabi... |
| Match: At2g16670.1 |
score: 26.18 |
e-value: 1.8e-29 |
Identity: 37.21% |
Span: 129bp (19.3%) |
Frame: -1 |
| At2g16670.1 68409.m01723 retroelement pol polyprotein -related |
| Match: At4g14460.1 |
score: 25.41 |
e-value: 4.5e-27 |
Identity: 40.62% |
Span: 93bp (13.9%) |
Frame: -1 |
| At4g14460.1 68411.m02019 retrovirus-related like polyprotein |
| Match: At2g04820.1 |
score: 25.02 |
e-value: 2.5e-20 |
Identity: 32.5% |
Span: 120bp (18.0%) |
Frame: -1 |
| At2g04820.1 68409.m00443 retroelement pol polyprotein -related |
| Match: At4g02960.1 |
score: 24.64 |
e-value: 1.9e-20 |
Identity: 28.26% |
Span: 138bp (20.7%) |
Frame: -1 |
| At4g02960.1 68411.m00365 polyprotein of LTR transposon -related similar to A. thaliana polyprotein, GenBank accession... |
| Match: At4g16870.1 |
score: 24.64 |
e-value: 2.4e-16 |
Identity: 34.15% |
Span: 123bp (18.4%) |
Frame: -1 |
| At4g16870.1 68411.m02317 retrotransposon like protein |
| Match: At3g60170.1 |
score: 24.25 |
e-value: 7.2e-15 |
Identity: 31.43% |
Span: 105bp (15.7%) |
Frame: -1 |
| At3g60170.1 68410.m06211 hypothetical protein several retrotransposon polyproteins |
| Match: At3g22340.1 |
score: 23.48 |
e-value: 4.4e-28 |
Identity: 45.45% |
Span: 66bp (9.9%) |
Frame: -1 |
| At3g22340.1 68410.m02562 hypothetical protein similar to a region of polyprotein GB:AAC02666 from [Arabidopsis thali... |
| Match: At1g27285.1 |
score: 23.48 |
e-value: 5.8e-19 |
Identity: 31.71% |
Span: 123bp (18.4%) |
Frame: -1 |
| At1g27285.1 68408.m03015 polyprotein -related similar to GB:AAC02666 |
| Match: At1g59265.1 |
score: 23.48 |
e-value: 7.1e-20 |
Identity: 29.27% |
Span: 123bp (18.4%) |
Frame: -1 |
| At1g59265.1 68408.m06119 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At1g58889.1 |
score: 23.48 |
e-value: 7.1e-20 |
Identity: 29.27% |
Span: 123bp (18.4%) |
Frame: -1 |
| At1g58889.1 68408.m06107 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At1g34904.1 |
score: 23.1 |
e-value: 1.1e-21 |
Identity: 36.96% |
Span: 138bp (20.7%) |
Frame: -1 |
| At1g34904.1 68408.m03937 retrofit -related similar to retrofit GI:2586082 from [Oryza longistaminata] |
| Match: At3g43955.1 |
score: 22.33 |
e-value: 3.5e-23 |
Identity: 29.73% |
Span: 111bp (16.6%) |
Frame: -1 |
| At3g43955.1 68410.m04359 retroelement pol polyprotein -related temporary automated functional assignment |
| Match: At4g10990.1 |
score: 21.94 |
e-value: 2.4e-25 |
Identity: 43.48% |
Span: 69bp (10.3%) |
Frame: -1 |
| At4g10990.1 68411.m01615 retrotransposon polyprotein -related various predicted LTR retrotransposons, Arabidopsisthal... |
|
| 35 lower scoring hits censored -- only 100 best hits are stored. |
