| arabidopsis/peptide [blastx] | Showing best 10 hits recorded |
| Match: At3G50670.1 |
score: 245 |
e-value: 1e-79 |
Identity: 78.07% |
Span: 558bp (82.8%) |
Frame: 1 |
| Symbols: U1SNRNP, U1-70K | U1-70K (SPLICEOSOMAL PROTEIN U1A); RNA binding | chr3:18837457-18840473 REVERSE |
| Match: At3G50670.2 |
score: 217 |
e-value: 9e-57 |
Identity: 79.64% |
Span: 498bp (73.9%) |
Frame: 1 |
| Symbols: U1SNRNP, U1-70K | U1-70K (SPLICEOSOMAL PROTEIN U1A); RNA binding | chr3:18839213-18840473 REVERSE |
| Match: At3G50670.1 |
score: 70.1 |
e-value: 1e-79 |
Identity: 76% |
Span: 150bp (22.3%) |
Frame: 2 |
| Symbols: U1SNRNP, U1-70K | U1-70K (SPLICEOSOMAL PROTEIN U1A); RNA binding | chr3:18837457-18840473 REVERSE |
| Match: At2G43370.1 |
score: 68.6 |
e-value: 5e-14 |
Identity: 50.79% |
Span: 189bp (28.0%) |
Frame: 1 |
| U1 small nuclear ribonucleoprotein 70 kDa, putative | chr2:18020508-18022453 FORWARD |
| Match: At1G73530.1 |
score: 55.5 |
e-value: 6e-08 |
Identity: 38.33% |
Span: 180bp (26.7%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr1:27647462-27649047 REVERSE |
| Match: At3G20930.1 |
score: 50.4 |
e-value: 2e-06 |
Identity: 34.38% |
Span: 186bp (27.6%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr3:7331745-7333755 FORWARD |
| Match: At5G09880.1 |
score: 45.4 |
e-value: 6e-05 |
Identity: 31.15% |
Span: 183bp (27.2%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr5:3081647-3085180 REVERSE |
| Match: At4G14300.1 |
score: 45.1 |
e-value: 8e-05 |
Identity: 35.71% |
Span: 159bp (23.6%) |
Frame: 1 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr4:8231175-8232781 FORWARD |
| Match: At4G20030.1 |
score: 44.3 |
e-value: 0.0001 |
Identity: 38.3% |
Span: 141bp (20.9%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr4:10846372-10847256 FORWARD |
| Match: At2G43370.1 |
score: 27.3 |
e-value: 5e-14 |
Identity: 32.43% |
Span: 111bp (16.5%) |
Frame: 2 |
| U1 small nuclear ribonucleoprotein 70 kDa, putative | chr2:18020508-18022453 FORWARD |
|
| 104 lower scoring hits censored -- only 10 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|15229825|ref|NP_190636.1| |
score: 245 |
e-value: 1e-77 |
Identity: 78.07% |
Span: 558bp (82.8%) |
Frame: 1 |
| U1-70K (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K); RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis... |
| Match: gi|84468434|dbj|BAE71300.1| |
score: 238 |
e-value: 7e-76 |
Identity: 80.33% |
Span: 546bp (81.0%) |
Frame: 1 |
| putative U1 snRNP 70K protein [Trifolium pratense] |
| Match: gi|68036648|gb|AAY84878.1| |
score: 227 |
e-value: 5e-74 |
Identity: 73.12% |
Span: 555bp (82.3%) |
Frame: 1 |
| U1 snRNP-interacting 70 kDa protein [Triticum aestivum] |
| Match: gi|78707654|gb|ABB46629.1| |
score: 226 |
e-value: 2e-57 |
Identity: 73.02% |
Span: 558bp (82.8%) |
Frame: 1 |
| transposon |
| Match: gi|87130529|gb|ABD23908.1| |
score: 226 |
e-value: 2e-57 |
Identity: 73.02% |
Span: 558bp (82.8%) |
Frame: 1 |
| U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica Group] |
| Match: gi|30693345|ref|NP_850676.1| |
score: 217 |
e-value: 7e-55 |
Identity: 79.64% |
Span: 498bp (73.9%) |
Frame: 1 |
| U1-70K (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K); RNA binding / nucleotide binding [Arabidopsis thaliana] >gi1354466|g... |
| Match: gi|49343276|gb|AAT64946.1| |
score: 213 |
e-value: 2e-53 |
Identity: 71.81% |
Span: 558bp (82.8%) |
Frame: 1 |
| gi|49343276|gb|AAT64946.1| U1 snRNP [Zea mays] >gi|49343272|gb|AAT64945.1| U1 snRNP [Zea mays] |
| Match: gi|37530562|ref|NP_919583.1| |
score: 211 |
e-value: 5e-53 |
Identity: 63.59% |
Span: 558bp (82.8%) |
Frame: 1 |
| gi|37530562|ref|NP_919583.1| putative U1 small nuclear ribonucleoprotein [Oryza sativa (japonica cultivar-group)] gi|... |
| Match: gi|92868913|gb|ABE78863.1| |
score: 207 |
e-value: 8e-52 |
Identity: 80% |
Span: 492bp (73.0%) |
Frame: 1 |
| U1 |
| Match: gi|87130533|gb|ABD23910.1| |
score: 193 |
e-value: 1e-47 |
Identity: 72.19% |
Span: 498bp (73.9%) |
Frame: 1 |
| U1 |
| Match: gi|49343293|gb|AAT64948.1| |
score: 182 |
e-value: 2e-44 |
Identity: 70.35% |
Span: 510bp (75.7%) |
Frame: 1 |
| gi|49343293|gb|AAT64948.1| U1 snRNP [Zea mays] >gi|49343280|gb|AAT64947.1| U1 snRNP [Zea mays] |
| Match: gi|109461922|ref|XP_001079238.1| |
score: 115 |
e-value: 7e-35 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|57634539|ref|NP_001009820.1| |
score: 115 |
e-value: 3e-24 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|57634539|ref|NP_001009820.1| U1 small nuclear ribonucleoprotein 70 kDa isoform b [Homo sapiens] >gi|76641951|ref|X... |
| Match: gi|825725|emb|CAA29964.1| |
score: 115 |
e-value: 3e-24 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|825725|emb|CAA29964.1| hU1-70K-like protein (216 AA) [Homo sapiens] |
| Match: gi|29568103|ref|NP_003080.2| |
score: 115 |
e-value: 7e-35 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|29568103|ref|NP_003080.2| U1 small nuclear ribonucleoprotein 70 kDa; small nuclear ribonucleoprotein 70kD polypept... |
| Match: gi|67846113|ref|NP_033250.3| |
score: 115 |
e-value: 7e-35 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|67846113|ref|NP_033250.3| U1 small nuclear ribonucleoprotein 70 kDa [Mus musculus] >gi|74221620|dbj|BAE21515.1| un... |
| Match: gi|76641957|ref|XP_615111.2| |
score: 115 |
e-value: 7e-35 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|76641957|ref|XP_615111.2| PREDICTED: similar to U1 small nuclear ribonucleoprotein 70 kDa isoform 1 [Bos taurus] |
| Match: gi|74153179|dbj|BAB27701.3| |
score: 115 |
e-value: 7e-35 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|74153179|dbj|BAB27701.3| unnamed protein product [Mus musculus] >gi|74140671|dbj|BAB29263.3| unnamed protein produ... |
| Match: gi|76641953|ref|XP_886913.1| |
score: 115 |
e-value: 7e-35 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|76641953|ref|XP_886913.1| PREDICTED: similar to U1 small nuclear ribonucleoprotein 70 kDa isoform 5 [Bos taurus] |
| Match: gi|92098366|gb|AAI14763.1| |
score: 115 |
e-value: 7e-35 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| Similar |
| Match: gi|36100|emb|CAA28352.1| |
score: 115 |
e-value: 7e-35 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|36100|emb|CAA28352.1| unnamed protein product [Homo sapiens] |
| Match: gi|337445|gb|AAA36573.1| |
score: 115 |
e-value: 7e-35 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|337445|gb|AAA36573.1| ribonucleoprotein antigen |
| Match: gi|73948009|ref|XP_541503.2| |
score: 115 |
e-value: 7e-35 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|73948009|ref|XP_541503.2| PREDICTED: similar to U1 small nuclear ribonucleoprotein 70 kDa [Canis familiaris] |
| Match: gi|76641949|ref|XP_873699.1| |
score: 115 |
e-value: 7e-35 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|76641949|ref|XP_873699.1| PREDICTED: similar to U1 small nuclear ribonucleoprotein 70 kDa isoform 2 [Bos taurus] |
| Match: gi|76641955|ref|XP_886926.1| |
score: 115 |
e-value: 7e-35 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|76641955|ref|XP_886926.1| PREDICTED: similar to U1 small nuclear ribonucleoprotein 70 kDa isoform 6 [Bos taurus] |
| Match: gi|109125535|ref|XP_001112732.1| |
score: 115 |
e-value: 7e-35 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| PREDICTED: similar to U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta] |
| Match: gi|30802167|gb|AAH51414.1| |
score: 115 |
e-value: 3e-24 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|30802167|gb|AAH51414.1| Similar to small nuclear ribonucleoprotein 70K [Mus musculus] |
| Match: gi|108742141|gb|AAI17603.1| |
score: 113 |
e-value: 2e-23 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| Snrp70 |
| Match: gi|51468002|ref|NP_001003875.1| |
score: 113 |
e-value: 2e-23 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| U1 |
| Match: gi|91078908|ref|XP_967303.1| |
score: 112 |
e-value: 2e-32 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|51703810|gb|AAH81331.1| |
score: 112 |
e-value: 6e-34 |
Identity: 50.43% |
Span: 351bp (52.1%) |
Frame: 1 |
| Snrp70 |
| Match: gi|91078906|ref|XP_976081.1| |
score: 112 |
e-value: 3e-23 |
Identity: 51.28% |
Span: 351bp (52.1%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|322618|pir||S28147 |
score: 111 |
e-value: 6e-27 |
Identity: 75% |
Span: 192bp (28.5%) |
Frame: 1 |
| gi|322618|pir||S28147 U1 snRNP 70K protein - Arabidopsis thaliana (fragment) |
| Match: gi|602021|emb|CAA29961.1| |
score: 110 |
e-value: 2e-33 |
Identity: 54.9% |
Span: 306bp (45.4%) |
Frame: 1 |
| gi|602021|emb|CAA29961.1| unnamed protein product [Homo sapiens] |
| Match: gi|66910786|gb|AAH97714.1| |
score: 107 |
e-value: 3e-32 |
Identity: 49.17% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|66910786|gb|AAH97714.1| Unknown (protein for IMAGE:6871460) [Xenopus laevis] |
| Match: gi|80479195|gb|AAI08448.1| |
score: 107 |
e-value: 3e-32 |
Identity: 49.17% |
Span: 351bp (52.1%) |
Frame: 1 |
| Unknown |
| Match: gi|65179|emb|CAA30972.1| |
score: 107 |
e-value: 3e-32 |
Identity: 49.17% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|65179|emb|CAA30972.1| U1 70K [Xenopus laevis] >gi|134091|sp|P09406|RU17_XENLA U1 small nuclear ribonucleoprotein 7... |
| Match: gi|51703882|gb|AAH81025.1| |
score: 107 |
e-value: 3e-32 |
Identity: 49.17% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|51703882|gb|AAH81025.1| Unknown (protein for IMAGE:6864404) [Xenopus laevis] |
| Match: gi|158315|gb|AAA28859.1| |
score: 105 |
e-value: 7e-31 |
Identity: 47.46% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|158315|gb|AAA28859.1| U1 70K small nuclear ribonucleoprotein, (first expressed exon) |
| Match: gi|19528491|gb|AAL90360.1| |
score: 105 |
e-value: 7e-31 |
Identity: 47.46% |
Span: 351bp (52.1%) |
Frame: 1 |
| RE35772p |
| Match: gi|54644102|gb|EAL32844.1| |
score: 105 |
e-value: 9e-31 |
Identity: 47.46% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|54644102|gb|EAL32844.1| GA21298-PA [Drosophila pseudoobscura] |
| Match: gi|110760725|ref|XP_623789.2| |
score: 104 |
e-value: 5e-30 |
Identity: 47.86% |
Span: 351bp (52.1%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|55246077|gb|EAA04709.2| |
score: 102 |
e-value: 1e-29 |
Identity: 48.72% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|55246077|gb|EAA04709.2| ENSANGP00000020311 [Anopheles gambiae str. PEST] >gi|58378755|ref|XP_308988.2| ENSANGP0000... |
| Match: gi|55246076|gb|EAL41962.1| |
score: 102 |
e-value: 1e-29 |
Identity: 48.72% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|55246076|gb|EAL41962.1| ENSANGP00000028567 [Anopheles gambiae str. PEST] >gi|57973120|ref|XP_565448.1| ENSANGP0000... |
| Match: gi|763157|emb|CAA33777.1| |
score: 99.8 |
e-value: 5e-30 |
Identity: 68.25% |
Span: 189bp (28.0%) |
Frame: 1 |
| gi|763157|emb|CAA33777.1| U1RNA-associated 70-kDa protein [Mus musculus] >gi|13633918|sp|Q62376|RU17_MOUSE U1 small n... |
| Match: gi|25152876|ref|NP_498565.2| |
score: 97.1 |
e-value: 4e-24 |
Identity: 44.44% |
Span: 348bp (51.6%) |
Frame: 1 |
| gi|25152876|ref|NP_498565.2| small nuclear ribonucleoprotein (rnp-7) [Caenorhabditis elegans] gi|20198850|gb|AAA62536... |
| Match: gi|39594035|emb|CAE70145.1| |
score: 95.1 |
e-value: 2e-23 |
Identity: 45.69% |
Span: 348bp (51.6%) |
Frame: 1 |
| gi|39594035|emb|CAE70145.1| Hypothetical protein CBG16607 [Caenorhabditis briggsae] |
| Match: gi|56757815|gb|AAW27048.1| |
score: 93.6 |
e-value: 4e-26 |
Identity: 41.03% |
Span: 351bp (52.1%) |
Frame: 1 |
| gi|56757815|gb|AAW27048.1| SJCHGC02307 protein [Schistosoma japonicum] |
| Match: gi|90298523|gb|EAS28154.1| |
score: 92 |
e-value: 6e-25 |
Identity: 45.9% |
Span: 348bp (51.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|82752588|ref|XP_727361.1| |
score: 91.7 |
e-value: 1e-24 |
Identity: 40.41% |
Span: 438bp (65.0%) |
Frame: 1 |
| U1 |
| Match: gi|23615799|emb|CAD52791.1| |
score: 90.9 |
e-value: 2e-26 |
Identity: 41.88% |
Span: 351bp (52.1%) |
Frame: 1 |
| u1 |
| Match: gi|70953786|ref|XP_745972.1| |
score: 90.5 |
e-value: 2e-24 |
Identity: 40.69% |
Span: 435bp (64.5%) |
Frame: 1 |
| gi|70953786|ref|XP_745972.1| u1 small nuclear ribonucleoprotein, putative [Plasmodium chabaudi] >gi|56526457|emb|CAH8... |
| Match: gi|71030936|ref|XP_765110.1| |
score: 88.6 |
e-value: 2e-23 |
Identity: 41.13% |
Span: 345bp (51.2%) |
Frame: 1 |
| U1 |
| Match: gi|66828257|ref|XP_647483.1| |
score: 87.8 |
e-value: 1e-25 |
Identity: 39.17% |
Span: 357bp (53.0%) |
Frame: 1 |
| gi|66828257|ref|XP_647483.1| hypothetical protein DDB0189711 [Dictyostelium discoideum] >gi|60475520|gb|EAL73455.1| h... |
| Match: gi|78707654|gb|ABB46629.1| |
score: 77.8 |
e-value: 9e-13 |
Identity: 54.67% |
Span: 225bp (33.4%) |
Frame: 2 |
| transposon |
| Match: gi|37530562|ref|NP_919583.1| |
score: 77.8 |
e-value: 9e-13 |
Identity: 54.67% |
Span: 225bp (33.4%) |
Frame: 2 |
| gi|37530562|ref|NP_919583.1| putative U1 small nuclear ribonucleoprotein [Oryza sativa (japonica cultivar-group)] gi|... |
| Match: gi|87130529|gb|ABD23908.1| |
score: 77.8 |
e-value: 9e-13 |
Identity: 54.67% |
Span: 225bp (33.4%) |
Frame: 2 |
| U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica Group] |
| Match: gi|68036648|gb|AAY84878.1| |
score: 75.9 |
e-value: 5e-74 |
Identity: 68.42% |
Span: 171bp (25.4%) |
Frame: 2 |
| U1 snRNP-interacting 70 kDa protein [Triticum aestivum] |
| Match: gi|84468434|dbj|BAE71300.1| |
score: 70.9 |
e-value: 7e-76 |
Identity: 66.67% |
Span: 171bp (25.4%) |
Frame: 2 |
| putative U1 snRNP 70K protein [Trifolium pratense] |
| Match: gi|15229825|ref|NP_190636.1| |
score: 70.1 |
e-value: 1e-77 |
Identity: 76% |
Span: 150bp (22.3%) |
Frame: 2 |
| U1-70K (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K); RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis... |
| Match: gi|49343276|gb|AAT64946.1| |
score: 68.6 |
e-value: 5e-10 |
Identity: 54.17% |
Span: 216bp (32.0%) |
Frame: 2 |
| gi|49343276|gb|AAT64946.1| U1 snRNP [Zea mays] >gi|49343272|gb|AAT64945.1| U1 snRNP [Zea mays] |
| Match: gi|51468002|ref|NP_001003875.1| |
score: 57.4 |
e-value: 1e-06 |
Identity: 49.12% |
Span: 171bp (25.4%) |
Frame: 2 |
| U1 |
| Match: gi|80479195|gb|AAI08448.1| |
score: 56.6 |
e-value: 3e-32 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| Unknown |
| Match: gi|67846113|ref|NP_033250.3| |
score: 56.6 |
e-value: 7e-35 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|67846113|ref|NP_033250.3| U1 small nuclear ribonucleoprotein 70 kDa [Mus musculus] >gi|74221620|dbj|BAE21515.1| un... |
| Match: gi|76641957|ref|XP_615111.2| |
score: 56.6 |
e-value: 7e-35 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|76641957|ref|XP_615111.2| PREDICTED: similar to U1 small nuclear ribonucleoprotein 70 kDa isoform 1 [Bos taurus] |
| Match: gi|51703882|gb|AAH81025.1| |
score: 56.6 |
e-value: 3e-32 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|51703882|gb|AAH81025.1| Unknown (protein for IMAGE:6864404) [Xenopus laevis] |
| Match: gi|74153179|dbj|BAB27701.3| |
score: 56.6 |
e-value: 7e-35 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|74153179|dbj|BAB27701.3| unnamed protein product [Mus musculus] >gi|74140671|dbj|BAB29263.3| unnamed protein produ... |
| Match: gi|76641953|ref|XP_886913.1| |
score: 56.6 |
e-value: 7e-35 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|76641953|ref|XP_886913.1| PREDICTED: similar to U1 small nuclear ribonucleoprotein 70 kDa isoform 5 [Bos taurus] |
| Match: gi|602021|emb|CAA29961.1| |
score: 56.6 |
e-value: 2e-33 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|602021|emb|CAA29961.1| unnamed protein product [Homo sapiens] |
| Match: gi|65179|emb|CAA30972.1| |
score: 56.6 |
e-value: 3e-32 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|65179|emb|CAA30972.1| U1 70K [Xenopus laevis] >gi|134091|sp|P09406|RU17_XENLA U1 small nuclear ribonucleoprotein 7... |
| Match: gi|92098366|gb|AAI14763.1| |
score: 56.6 |
e-value: 7e-35 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| Similar |
| Match: gi|109461922|ref|XP_001079238.1| |
score: 56.6 |
e-value: 7e-35 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|36100|emb|CAA28352.1| |
score: 56.6 |
e-value: 7e-35 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|36100|emb|CAA28352.1| unnamed protein product [Homo sapiens] |
| Match: gi|76641949|ref|XP_873699.1| |
score: 56.6 |
e-value: 7e-35 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|76641949|ref|XP_873699.1| PREDICTED: similar to U1 small nuclear ribonucleoprotein 70 kDa isoform 2 [Bos taurus] |
| Match: gi|73948009|ref|XP_541503.2| |
score: 56.6 |
e-value: 7e-35 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|73948009|ref|XP_541503.2| PREDICTED: similar to U1 small nuclear ribonucleoprotein 70 kDa [Canis familiaris] |
| Match: gi|76641955|ref|XP_886926.1| |
score: 56.6 |
e-value: 7e-35 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|76641955|ref|XP_886926.1| PREDICTED: similar to U1 small nuclear ribonucleoprotein 70 kDa isoform 6 [Bos taurus] |
| Match: gi|51703810|gb|AAH81331.1| |
score: 56.6 |
e-value: 6e-34 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| Snrp70 |
| Match: gi|763157|emb|CAA33777.1| |
score: 56.6 |
e-value: 5e-30 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|763157|emb|CAA33777.1| U1RNA-associated 70-kDa protein [Mus musculus] >gi|13633918|sp|Q62376|RU17_MOUSE U1 small n... |
| Match: gi|109125535|ref|XP_001112732.1| |
score: 56.6 |
e-value: 7e-35 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| PREDICTED: similar to U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta] |
| Match: gi|337445|gb|AAA36573.1| |
score: 56.6 |
e-value: 7e-35 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|337445|gb|AAA36573.1| ribonucleoprotein antigen |
| Match: gi|29568103|ref|NP_003080.2| |
score: 56.6 |
e-value: 7e-35 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|29568103|ref|NP_003080.2| U1 small nuclear ribonucleoprotein 70 kDa; small nuclear ribonucleoprotein 70kD polypept... |
| Match: gi|66910786|gb|AAH97714.1| |
score: 56.6 |
e-value: 3e-32 |
Identity: 66.67% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|66910786|gb|AAH97714.1| Unknown (protein for IMAGE:6871460) [Xenopus laevis] |
| Match: gi|108742141|gb|AAI17603.1| |
score: 56.2 |
e-value: 3e-06 |
Identity: 49.09% |
Span: 165bp (24.5%) |
Frame: 2 |
| Snrp70 |
| Match: gi|66828257|ref|XP_647483.1| |
score: 53.9 |
e-value: 1e-25 |
Identity: 62.86% |
Span: 105bp (15.6%) |
Frame: 2 |
| gi|66828257|ref|XP_647483.1| hypothetical protein DDB0189711 [Dictyostelium discoideum] >gi|60475520|gb|EAL73455.1| h... |
| Match: gi|23615799|emb|CAD52791.1| |
score: 53.5 |
e-value: 2e-26 |
Identity: 58.97% |
Span: 117bp (17.4%) |
Frame: 2 |
| u1 |
| Match: gi|158315|gb|AAA28859.1| |
score: 53.1 |
e-value: 7e-31 |
Identity: 64.1% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|158315|gb|AAA28859.1| U1 70K small nuclear ribonucleoprotein, (first expressed exon) |
| Match: gi|19528491|gb|AAL90360.1| |
score: 53.1 |
e-value: 7e-31 |
Identity: 64.1% |
Span: 117bp (17.4%) |
Frame: 2 |
| RE35772p |
| Match: gi|54644102|gb|EAL32844.1| |
score: 53.1 |
e-value: 9e-31 |
Identity: 64.1% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|54644102|gb|EAL32844.1| GA21298-PA [Drosophila pseudoobscura] |
| Match: gi|55246076|gb|EAL41962.1| |
score: 52.8 |
e-value: 1e-29 |
Identity: 64.1% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|55246076|gb|EAL41962.1| ENSANGP00000028567 [Anopheles gambiae str. PEST] >gi|57973120|ref|XP_565448.1| ENSANGP0000... |
| Match: gi|55246077|gb|EAA04709.2| |
score: 52.8 |
e-value: 1e-29 |
Identity: 64.1% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|55246077|gb|EAA04709.2| ENSANGP00000020311 [Anopheles gambiae str. PEST] >gi|58378755|ref|XP_308988.2| ENSANGP0000... |
| Match: gi|91078908|ref|XP_967303.1| |
score: 51.6 |
e-value: 2e-32 |
Identity: 61.54% |
Span: 117bp (17.4%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|110760725|ref|XP_623789.2| |
score: 51.6 |
e-value: 5e-30 |
Identity: 61.54% |
Span: 117bp (17.4%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|56757815|gb|AAW27048.1| |
score: 49.7 |
e-value: 4e-26 |
Identity: 56.41% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|56757815|gb|AAW27048.1| SJCHGC02307 protein [Schistosoma japonicum] |
| Match: gi|90298523|gb|EAS28154.1| |
score: 47 |
e-value: 6e-25 |
Identity: 58.33% |
Span: 108bp (16.0%) |
Frame: 2 |
| hypothetical |
| Match: gi|70953786|ref|XP_745972.1| |
score: 46.6 |
e-value: 2e-24 |
Identity: 51.28% |
Span: 117bp (17.4%) |
Frame: 2 |
| gi|70953786|ref|XP_745972.1| u1 small nuclear ribonucleoprotein, putative [Plasmodium chabaudi] >gi|56526457|emb|CAH8... |
| Match: gi|82752588|ref|XP_727361.1| |
score: 46.2 |
e-value: 1e-24 |
Identity: 51.28% |
Span: 117bp (17.4%) |
Frame: 2 |
| U1 |
| Match: gi|71030936|ref|XP_765110.1| |
score: 45.4 |
e-value: 2e-23 |
Identity: 56.76% |
Span: 111bp (16.5%) |
Frame: 2 |
| U1 |
| Match: gi|39594035|emb|CAE70145.1| |
score: 39.3 |
e-value: 2e-23 |
Identity: 47.22% |
Span: 108bp (16.0%) |
Frame: 2 |
| gi|39594035|emb|CAE70145.1| Hypothetical protein CBG16607 [Caenorhabditis briggsae] |
| Match: gi|25152876|ref|NP_498565.2| |
score: 39.3 |
e-value: 4e-24 |
Identity: 47.22% |
Span: 108bp (16.0%) |
Frame: 2 |
| gi|25152876|ref|NP_498565.2| small nuclear ribonucleoprotein (rnp-7) [Caenorhabditis elegans] gi|20198850|gb|AAA62536... |
| Match: gi|322618|pir||S28147 |
score: 34.3 |
e-value: 6e-27 |
Identity: 82.35% |
Span: 51bp (7.6%) |
Frame: 2 |
| gi|322618|pir||S28147 U1 snRNP 70K protein - Arabidopsis thaliana (fragment) |
|
| 243 lower scoring hits censored -- only 100 best hits are stored. |
