| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|15223967|ref|NP_177871.1| |
score: 320.9 |
e-value: 9.7e-87 |
Identity: 75.81% |
Span: 639bp (94.0%) |
Frame: 1 |
| replication factor C 36 kDA, putative [Arabidopsis thaliana] >gi12323400|gb|AAG51681.1|AC010704_25 putative replicati... |
| Match: gi|10798790|dbj|BAB16439.1| |
score: 310.1 |
e-value: 1.7e-83 |
Identity: 73.49% |
Span: 636bp (93.5%) |
Frame: 1 |
| replication factor C 36kDa subunit [Oryza sativa Japonica Group] |
| Match: gi|13431787|sp|O14003|RFC3_SCHPO |
score: 229.9 |
e-value: 2.3e-59 |
Identity: 57.29% |
Span: 576bp (84.7%) |
Frame: 1 |
| gi|13431787|sp|O14003|RFC3_SCHPO Activator 1 subunit 3 (Replication factor C subunit 3) (Replication factor C3) gi|11... |
| Match: gi|27882432|gb|AAH44712.1| |
score: 229.2 |
e-value: 3.9e-59 |
Identity: 61.03% |
Span: 582bp (85.6%) |
Frame: 1 |
| gi|27882432|gb|AAH44712.1| Rfc5-prov protein [Xenopus laevis] |
| Match: gi|20841441|ref|XP_132348.1| |
score: 226.9 |
e-value: 1.9e-58 |
Identity: 64.25% |
Span: 534bp (78.5%) |
Frame: 1 |
| gi|20841441|ref|XP_132348.1| replication factor C 5 [Mus musculus] gi|30913281|sp|Q9D0F6|RFC5_MOUSE Activator 1 36 kD... |
| Match: gi|6677723|ref|NP_031396.1| |
score: 226.5 |
e-value: 2.5e-58 |
Identity: 62.78% |
Span: 537bp (79.0%) |
Frame: 1 |
| replication factor C subunit 5 isoform 1 [Homo sapiens] >gi728777|sp|P40937.1|RFC5_HUMAN RecName: Full=Replication fa... |
| Match: gi|34872605|ref|XP_222214.2| |
score: 226.5 |
e-value: 2.5e-58 |
Identity: 64.25% |
Span: 534bp (78.5%) |
Frame: 1 |
| gi|34872605|ref|XP_222214.2| similar to replication factor C 5 isoform 1; RFC, 36.5 kD subunit; activator 1 36 kDa su... |
| Match: gi|31210123|ref|XP_314028.1| |
score: 224.2 |
e-value: 1.2e-57 |
Identity: 62.36% |
Span: 531bp (78.1%) |
Frame: 1 |
| gi|31210123|ref|XP_314028.1| ENSANGP00000009970 [Anopheles gambiae] gi|21297309|gb|EAA09454.1| ENSANGP00000009970 [An... |
| Match: gi|32417990|ref|XP_329473.1| |
score: 218 |
e-value: 8.9e-56 |
Identity: 57.35% |
Span: 588bp (86.5%) |
Frame: 1 |
| gi|32417990|ref|XP_329473.1| hypothetical protein [Neurospora crassa] gi|28881264|emb|CAD70523.1| related to replicat... |
| Match: gi|19921076|ref|NP_609399.1| |
score: 218 |
e-value: 8.9e-56 |
Identity: 59.89% |
Span: 558bp (82.1%) |
Frame: 1 |
| gi|19921076|ref|NP_609399.1| CG5313-PA [Drosophila melanogaster] gi|7533196|gb|AAF63387.1| replication factor C subun... |
| Match: gi|30913228|sp|O74111|RFC3_ARXAD |
score: 213.4 |
e-value: 2.2e-54 |
Identity: 55.44% |
Span: 579bp (85.1%) |
Frame: 1 |
| gi|30913228|sp|O74111|RFC3_ARXAD Activator 1 subunit 3 (Replication factor C subunit 3) (Replication factor C3) gi|33... |
| Match: gi|6324039|ref|NP_014109.1| |
score: 211.5 |
e-value: 8.3e-54 |
Identity: 55.38% |
Span: 558bp (82.1%) |
Frame: 1 |
| gi|6324039|ref|NP_014109.1| RFC is a DNA binding protein and ATPase that acts as a processivity factor for DNA polyme... |
| Match: gi|23271821|gb|AAH23674.1| |
score: 209.9 |
e-value: 2.4e-53 |
Identity: 64.5% |
Span: 504bp (74.1%) |
Frame: 1 |
| Rfc5 protein [Mus musculus] |
| Match: gi|17553436|ref|NP_498750.1| |
score: 198.7 |
e-value: 5.6e-50 |
Identity: 50.73% |
Span: 534bp (78.5%) |
Frame: 1 |
| gi|17553436|ref|NP_498750.1| replication factor C 5, possibly N-myristoylated (3J118) [Caenorhabditis elegans] gi|309... |
| Match: gi|23509823|ref|NP_702490.1| |
score: 198.4 |
e-value: 7.3e-50 |
Identity: 52.84% |
Span: 525bp (77.2%) |
Frame: 1 |
| gi|23509823|ref|NP_702490.1| replication factor C3 [Plasmodium falciparum 3D7] gi|11559500|gb|AAG37985.1| replication... |
| Match: gi|23479189|gb|EAA16086.1| |
score: 196.1 |
e-value: 3.6e-49 |
Identity: 51.4% |
Span: 534bp (78.5%) |
Frame: 1 |
| gi|23479189|gb|EAA16086.1| replication factor C3 [Plasmodium yoelii yoelii] |
| Match: gi|630627|pir||S44809 |
score: 193.7 |
e-value: 1.8e-48 |
Identity: 50% |
Span: 534bp (78.5%) |
Frame: 1 |
| gi|630627|pir||S44809 F44B9.8 protein - Caenorhabditis elegans |
| Match: gi|32422885|ref|XP_331886.1| |
score: 189.5 |
e-value: 3.4e-47 |
Identity: 50% |
Span: 546bp (80.3%) |
Frame: 1 |
| gi|32422885|ref|XP_331886.1| hypothetical protein [Neurospora crassa] gi|28927269|gb|EAA36224.1| hypothetical protein... |
| Match: gi|31207631|ref|XP_312782.1| |
score: 188.3 |
e-value: 7.5e-47 |
Identity: 51.04% |
Span: 555bp (81.6%) |
Frame: 1 |
| gi|31207631|ref|XP_312782.1| ENSANGP00000020452 [Anopheles gambiae] gi|21296332|gb|EAA08477.1| ENSANGP00000020452 [An... |
| Match: gi|29841325|gb|AAP06357.1| |
score: 180.6 |
e-value: 1.6e-44 |
Identity: 46.6% |
Span: 585bp (86.0%) |
Frame: 1 |
| gi|29841325|gb|AAP06357.1| similar to GenBank Accession Number BC003335 activator 1; 37 kDa subunit; replication fact... |
| Match: gi|6322528|ref|NP_012602.1| |
score: 179.1 |
e-value: 4.6e-44 |
Identity: 45.41% |
Span: 594bp (87.4%) |
Frame: 1 |
| gi|6322528|ref|NP_012602.1| RFC is a DNA binding protein and ATPase that acts as a processivity factor for DNA polyme... |
| Match: gi|19115452|ref|NP_594540.1| |
score: 179.1 |
e-value: 4.6e-44 |
Identity: 48.88% |
Span: 522bp (76.8%) |
Frame: 1 |
| gi|19115452|ref|NP_594540.1| replication factor C activator 1 41 kd subunit [Schizosaccharomyces pombe] gi|1350581|sp... |
| Match: gi|10798806|dbj|BAB16441.1| |
score: 178.3 |
e-value: 7.8e-44 |
Identity: 48.65% |
Span: 537bp (79.0%) |
Frame: 1 |
| replication factor C 37 kDa subunit [Oryza sativa Japonica Group] >gi77553810|gb|ABA96606.1| Activator 1 37 kDa subun... |
| Match: gi|18395021|ref|NP_564148.1| |
score: 174.5 |
e-value: 1.1e-42 |
Identity: 48.09% |
Span: 531bp (78.1%) |
Frame: 1 |
| emb1968 (embryo defective 1968); ATP binding / ATPase/ DNA binding / DNA clamp loader/ nucleoside-triphosphatase/ nuc... |
| Match: gi|25301746|pir||B86350 |
score: 174.5 |
e-value: 1.1e-42 |
Identity: 48.09% |
Span: 531bp (78.1%) |
Frame: 1 |
| gi|25301746|pir||B86350 hypothetical protein F8K7.11 - Arabidopsis thaliana gi|5263320|gb|AAD41422.1| Similar to gb|M... |
| Match: gi|17554730|ref|NP_498521.1| |
score: 173.7 |
e-value: 1.9e-42 |
Identity: 48.92% |
Span: 546bp (80.3%) |
Frame: 1 |
| gi|17554730|ref|NP_498521.1| DNA Replication Factor C (rfc-4) [Caenorhabditis elegans] gi|1703051|sp|P53016|RFC4_CAEE... |
| Match: gi|15988297|pdb|1IQP|A |
score: 172.6 |
e-value: 4.3e-42 |
Identity: 47.43% |
Span: 525bp (77.2%) |
Frame: 1 |
| gi|15988297|pdb|1IQP|A Chain A, Crystal Structure Of The Clamp Loader Small Subunit From Pyrococcus Furiosus gi|15988... |
| Match: gi|4506491|ref|NP_002907.1| |
score: 172.6 |
e-value: 4.3e-42 |
Identity: 46.92% |
Span: 594bp (87.4%) |
Frame: 1 |
| gi|4506491|ref|NP_002907.1| replication factor C 4; A1 37 kDa subunit; activator 1 37 kDa subunit; RFC 37 kDa subunit... |
| Match: gi|283966|pir||A45253 |
score: 172.6 |
e-value: 4.3e-42 |
Identity: 46.92% |
Span: 594bp (87.4%) |
Frame: 1 |
| gi|283966|pir||A45253 activator 1 37K chain - human |
| Match: gi|30584245|gb|AAP36371.1| |
score: 172.6 |
e-value: 4.3e-42 |
Identity: 46.92% |
Span: 594bp (87.4%) |
Frame: 1 |
| gi|30584245|gb|AAP36371.1| Homo sapiens replication factor C (activator 1) 4, 37kDa [synthetic construct] |
| Match: gi|34869304|ref|XP_213598.2| |
score: 172.6 |
e-value: 4.3e-42 |
Identity: 46.45% |
Span: 594bp (87.4%) |
Frame: 1 |
| gi|34869304|ref|XP_213598.2| similar to expressed sequence AU040575 [Rattus norvegicus] |
| Match: gi|15920690|ref|NP_376359.1| |
score: 172.2 |
e-value: 5.6e-42 |
Identity: 49.16% |
Span: 537bp (79.0%) |
Frame: 1 |
| gi|15920690|ref|NP_376359.1| 327aa long hypothetical replication factor C small subunit [Sulfolobus tokodaii] gi|1562... |
| Match: gi|18859927|ref|NP_573245.1| |
score: 171.8 |
e-value: 7.3e-42 |
Identity: 47.49% |
Span: 525bp (77.2%) |
Frame: 1 |
| gi|18859927|ref|NP_573245.1| CG8142-PA [Drosophila melanogaster] gi|17862532|gb|AAL39743.1| LD35209p [Drosophila mela... |
| Match: gi|21703948|ref|NP_663455.1| |
score: 170.6 |
e-value: 1.6e-41 |
Identity: 48.44% |
Span: 555bp (81.6%) |
Frame: 1 |
| gi|21703948|ref|NP_663455.1| replication factor C (activator 1) 4 [Mus musculus] gi|13097123|gb|AAH03335.1| Replicati... |
| Match: gi|20892131|ref|XP_148470.1| |
score: 170.6 |
e-value: 1.6e-41 |
Identity: 48.44% |
Span: 555bp (81.6%) |
Frame: 1 |
| gi|20892131|ref|XP_148470.1| similar to CG8142 gene product [Mus musculus] |
| Match: gi|15791090|ref|NP_280914.1| |
score: 169.5 |
e-value: 3.6e-41 |
Identity: 50% |
Span: 522bp (76.8%) |
Frame: 1 |
| gi|15791090|ref|NP_280914.1| replication factor C small subunit; RfcA [Halobacterium sp. NRC-1] gi|25301745|pir||F843... |
| Match: gi|34097966|dbj|BAC82198.1| |
score: 169.5 |
e-value: 3.6e-41 |
Identity: 45.45% |
Span: 594bp (87.4%) |
Frame: 1 |
| gi|34097966|dbj|BAC82198.1| replication factor C p37 subunit [Xenopus laevis] |
| Match: gi|17541988|ref|NP_500069.1| |
score: 169.1 |
e-value: 4.7e-41 |
Identity: 45.95% |
Span: 555bp (81.6%) |
Frame: 1 |
| gi|17541988|ref|NP_500069.1| DNA Replication Factor C (37.6 kD) (rfc-2) [Caenorhabditis elegans] gi|25301742|pir||D88... |
| Match: gi|13242652|ref|NP_077667.1| |
score: 168.3 |
e-value: 8.1e-41 |
Identity: 50.85% |
Span: 525bp (77.2%) |
Frame: 1 |
| gi|13242652|ref|NP_077667.1| EsV-1-182 [Ectocarpus siliculosus virus] gi|13177452|gb|AAK14596.1| EsV-1-182 [Ectocarpu... |
| Match: gi|38107020|gb|EAA53249.1| |
score: 167.5 |
e-value: 1.4e-40 |
Identity: 43.84% |
Span: 606bp (89.1%) |
Frame: 1 |
| gi|38107020|gb|EAA53249.1| hypothetical protein MG07526.4 [Magnaporthe grisea 70-15] |
| Match: gi|32412616|ref|XP_326788.1| |
score: 167.5 |
e-value: 1.4e-40 |
Identity: 45.69% |
Span: 591bp (86.9%) |
Frame: 1 |
| gi|32412616|ref|XP_326788.1| hypothetical protein [Neurospora crassa] gi|28922926|gb|EAA32145.1| hypothetical protein... |
| Match: gi|28950096|emb|CAD70859.1| |
score: 167.5 |
e-value: 1.4e-40 |
Identity: 45.69% |
Span: 591bp (86.9%) |
Frame: 1 |
| gi|28950096|emb|CAD70859.1| probable REPLICATION FACTOR C (40 KDA SUBUNIT) [Neurospora crassa] |
| Match: gi|14601459|ref|NP_147997.1| |
score: 167.2 |
e-value: 1.8e-40 |
Identity: 48.28% |
Span: 522bp (76.8%) |
Frame: 1 |
| gi|14601459|ref|NP_147997.1| replication factor C subunit [Aeropyrum pernix] gi|7444555|pir||C72633 probable replicat... |
| Match: gi|15897670|ref|NP_342275.1| |
score: 166 |
e-value: 4e-40 |
Identity: 46.93% |
Span: 537bp (79.0%) |
Frame: 1 |
| gi|15897670|ref|NP_342275.1| Activator 1, replication factor C, small subunit (rfc) [Sulfolobus solfataricus] gi|2530... |
| Match: gi|30687479|ref|NP_849695.1| |
score: 165.6 |
e-value: 5.2e-40 |
Identity: 47.54% |
Span: 531bp (78.1%) |
Frame: 1 |
| emb1968 (embryo defective 1968); ATP binding / ATPase/ DNA binding / DNA clamp loader/ nucleoside-triphosphatase/ nuc... |
| Match: gi|18312140|ref|NP_558807.1| |
score: 165.2 |
e-value: 6.8e-40 |
Identity: 46.55% |
Span: 522bp (76.8%) |
Frame: 1 |
| gi|18312140|ref|NP_558807.1| replication factor C small subunit [Pyrobaculum aerophilum] gi|18159573|gb|AAL62989.1| r... |
| Match: gi|15221697|ref|NP_176504.1| |
score: 164.5 |
e-value: 1.2e-39 |
Identity: 47.85% |
Span: 558bp (82.1%) |
Frame: 1 |
| replication factor C 40 kDa, putative [Arabidopsis thaliana] >gi12323266|gb|AAG51618.1|AC010795_22 replication factor... |
| Match: gi|11499642|ref|NP_070884.1| |
score: 164.1 |
e-value: 1.5e-39 |
Identity: 45.4% |
Span: 522bp (76.8%) |
Frame: 1 |
| gi|11499642|ref|NP_070884.1| activator 1, replication factor C, 35 KD subunit [Archaeoglobus fulgidus DSM 4304] gi|74... |
| Match: gi|18312778|ref|NP_559445.1| |
score: 164.1 |
e-value: 1.5e-39 |
Identity: 47.13% |
Span: 522bp (76.8%) |
Frame: 1 |
| gi|18312778|ref|NP_559445.1| replication factor C small subunit [Pyrobaculum aerophilum] gi|18160261|gb|AAL63627.1| r... |
| Match: gi|34871892|ref|XP_341063.1| |
score: 163.7 |
e-value: 2e-39 |
Identity: 47.46% |
Span: 531bp (78.1%) |
Frame: 1 |
| gi|34871892|ref|XP_341063.1| replication factor C 2 (40kD) [Rattus norvegicus] gi|34873324|ref|XP_347154.1| similar t... |
| Match: gi|11177922|ref|NP_064406.1| |
score: 163.3 |
e-value: 2.6e-39 |
Identity: 47.46% |
Span: 531bp (78.1%) |
Frame: 1 |
| replication factor C subunit 2 [Mus musculus] >gi23813636|sp|Q9WUK4.1|RFC2_MOUSE RecName: Full=Replication factor C s... |
| Match: gi|38344372|emb|CAE02250.2| |
score: 162.9 |
e-value: 3.4e-39 |
Identity: 47.09% |
Span: 558bp (82.1%) |
Frame: 1 |
| gi|38344372|emb|CAE02250.2| OSJNBb0032E06.6 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15991286|dbj|BAB69675.1| |
score: 162.5 |
e-value: 4.4e-39 |
Identity: 47.09% |
Span: 558bp (82.1%) |
Frame: 1 |
| replication factor C 40kDa subunit [Oryza sativa Japonica Group] >gi116310007|emb|CAH67033.1| OSIGBa0139P06.6 [Oryza ... |
| Match: gi|38349727|ref|NP_941563.1| |
score: 162.2 |
e-value: 5.8e-39 |
Identity: 45.4% |
Span: 522bp (76.8%) |
Frame: 1 |
| gi|38349727|ref|NP_941563.1| ATPase involved in DNA replication [Nanoarchaeum equitans Kin4-M] |
| Match: gi|6324478|ref|NP_014547.1| |
score: 162.2 |
e-value: 5.8e-39 |
Identity: 47.16% |
Span: 528bp (77.6%) |
Frame: 1 |
| gi|6324478|ref|NP_014547.1| RFC is a DNA binding protein and ATPase that acts as a processivity factor for DNA polyme... |
| Match: gi|19115324|ref|NP_594412.1| |
score: 162.2 |
e-value: 5.8e-39 |
Identity: 56.83% |
Span: 417bp (61.3%) |
Frame: 1 |
| gi|19115324|ref|NP_594412.1| Replication factor C 36 KD subunit; activator 1 36 kd subunit [Schizosaccharomyces pombe... |
| Match: gi|31563534|ref|NP_852136.1| |
score: 161.8 |
e-value: 7.5e-39 |
Identity: 46.33% |
Span: 531bp (78.1%) |
Frame: 1 |
| replication factor C subunit 2 isoform 1 [Homo sapiens] >gi2507300|sp|P35250.3|RFC2_HUMAN RecName: Full=Replication f... |
| Match: gi|1703053|sp|P53033|RFC2_CHICK |
score: 159.8 |
e-value: 2.9e-38 |
Identity: 46.59% |
Span: 528bp (77.6%) |
Frame: 1 |
| gi|1703053|sp|P53033|RFC2_CHICK Activator 1 40 kDa subunit (Replication factor C 40 kDa subunit) (A1 40 kDa subunit) ... |
| Match: gi|12847419|dbj|BAB27561.1| |
score: 159.1 |
e-value: 4.9e-38 |
Identity: 46.33% |
Span: 531bp (78.1%) |
Frame: 1 |
| unnamed protein product [Mus musculus] |
| Match: gi|19073950|ref|NP_584556.1| |
score: 158.7 |
e-value: 6.4e-38 |
Identity: 51.28% |
Span: 468bp (68.8%) |
Frame: 1 |
| gi|19073950|ref|NP_584556.1| DNA REPLICATION FACTOR C (ACTIVATOR 1) SUBUNIT [Encephalitozoon cuniculi] gi|19068592|em... |
| Match: gi|539678|pir||A42700 |
score: 157.1 |
e-value: 1.9e-37 |
Identity: 45.76% |
Span: 531bp (78.1%) |
Frame: 1 |
| gi|539678|pir||A42700 replication factor C - human |
| Match: gi|29251406|gb|EAA42888.1| |
score: 156.8 |
e-value: 2.4e-37 |
Identity: 43.58% |
Span: 528bp (77.6%) |
Frame: 1 |
| gi|29251406|gb|EAA42888.1| GLP_574_161256_160291 [Giardia lamblia ATCC 50803] |
| Match: gi|19114033|ref|NP_593121.1| |
score: 156.8 |
e-value: 2.4e-37 |
Identity: 43.68% |
Span: 570bp (83.8%) |
Frame: 1 |
| gi|19114033|ref|NP_593121.1| replication factor C, activator 1 subunit [Schizosaccharomyces pombe] gi|30913230|sp|O94... |
| Match: gi|16805067|ref|NP_473096.1| |
score: 156.8 |
e-value: 2.4e-37 |
Identity: 44.62% |
Span: 534bp (78.5%) |
Frame: 1 |
| gi|16805067|ref|NP_473096.1| replication factor C, subunit 2 [Plasmodium falciparum 3D7] gi|7444556|pir||H71604 repli... |
| Match: gi|11559504|gb|AAG37987.1| |
score: 156.8 |
e-value: 2.4e-37 |
Identity: 44.62% |
Span: 534bp (78.5%) |
Frame: 1 |
| gi|11559504|gb|AAG37987.1| replication factor C subunit 2; RFC2 [Plasmodium falciparum] |
| Match: gi|23509093|ref|NP_701761.1| |
score: 154.5 |
e-value: 1.2e-36 |
Identity: 45.4% |
Span: 522bp (76.8%) |
Frame: 1 |
| gi|23509093|ref|NP_701761.1| replication factor c subunit 4 [Plasmodium falciparum 3D7] gi|11559514|gb|AAG37992.1| re... |
| Match: gi|23478491|gb|EAA15565.1| |
score: 153.7 |
e-value: 2.1e-36 |
Identity: 43.78% |
Span: 531bp (78.1%) |
Frame: 1 |
| gi|23478491|gb|EAA15565.1| replication factor C, 40 kDa subunit [Plasmodium yoelii yoelii] |
| Match: gi|15678269|ref|NP_275384.1| |
score: 152.9 |
e-value: 3.5e-36 |
Identity: 43.43% |
Span: 525bp (77.2%) |
Frame: 1 |
| gi|15678269|ref|NP_275384.1| replication factor C, small subunit [Methanothermobacter thermautotrophicus] gi|7444553|... |
| Match: gi|20089555|ref|NP_615630.1| |
score: 152.5 |
e-value: 4.6e-36 |
Identity: 43.86% |
Span: 510bp (75.0%) |
Frame: 1 |
| gi|20089555|ref|NP_615630.1| replication factor C, small subunit [Methanosarcina acetivorans str. C2A] gi|19914469|gb... |
| Match: gi|21227923|ref|NP_633845.1| |
score: 152.5 |
e-value: 4.6e-36 |
Identity: 43.86% |
Span: 510bp (75.0%) |
Frame: 1 |
| gi|21227923|ref|NP_633845.1| replication factor C subunit [Methanosarcina mazei Goe1] gi|20906344|gb|AAM31517.1| repl... |
| Match: gi|23052253|ref|ZP_00078916.1| |
score: 151.4 |
e-value: 1e-35 |
Identity: 44.44% |
Span: 510bp (75.0%) |
Frame: 1 |
| gi|23052253|ref|ZP_00078916.1| COG0470: ATPase involved in DNA replication [Methanosarcina barkeri] |
| Match: gi|38104000|gb|EAA50630.1| |
score: 150.6 |
e-value: 1.7e-35 |
Identity: 52.32% |
Span: 429bp (63.1%) |
Frame: 1 |
| gi|38104000|gb|EAA50630.1| hypothetical protein MG04389.4 [Magnaporthe grisea 70-15] |
| Match: gi|17647857|ref|NP_523915.1| |
score: 149.8 |
e-value: 3e-35 |
Identity: 44.63% |
Span: 531bp (78.1%) |
Frame: 1 |
| gi|17647857|ref|NP_523915.1| Replication-factor-C 40kD subunit CG14999-PA [Drosophila melanogaster] gi|1703054|sp|P53... |
| Match: gi|22406465|ref|ZP_00001313.1| |
score: 149.8 |
e-value: 3e-35 |
Identity: 42.53% |
Span: 522bp (76.8%) |
Frame: 1 |
| gi|22406465|ref|ZP_00001313.1| COG0470: ATPase involved in DNA replication [Ferroplasma acidarmanus] |
| Match: gi|34869552|ref|XP_223877.2| |
score: 147.9 |
e-value: 1.1e-34 |
Identity: 60.15% |
Span: 396bp (58.2%) |
Frame: 1 |
| gi|34869552|ref|XP_223877.2| similar to replication factor C 5 isoform 1; RFC, 36.5 kD subunit; activator 1 36 kDa su... |
| Match: gi|32451662|gb|AAH54598.1| |
score: 145.6 |
e-value: 5.6e-34 |
Identity: 47.06% |
Span: 489bp (71.9%) |
Frame: 1 |
| gi|32451662|gb|AAH54598.1| Unknown (protein for MGC:64030) [Danio rerio] |
| Match: gi|23486553|gb|EAA20830.1| |
score: 144.1 |
e-value: 1.6e-33 |
Identity: 43.09% |
Span: 522bp (76.8%) |
Frame: 1 |
| gi|23486553|gb|EAA20830.1| replication factor C subunit 4 [Plasmodium yoelii yoelii] |
| Match: gi|31795540|ref|NP_853556.1| |
score: 142.5 |
e-value: 4.7e-33 |
Identity: 66.07% |
Span: 336bp (49.4%) |
Frame: 1 |
| gi|31795540|ref|NP_853556.1| replication factor C 5 isoform 2; RFC, 36.5 kD subunit; activator 1 36 kDa subunit; A1 3... |
| Match: gi|13242694|ref|NP_077709.1| |
score: 141.7 |
e-value: 8.1e-33 |
Identity: 40.11% |
Span: 528bp (77.6%) |
Frame: 1 |
| gi|13242694|ref|NP_077709.1| EsV-1-224 [Ectocarpus siliculosus virus] gi|13177494|gb|AAK14638.1| EsV-1-224 [Ectocarpu... |
| Match: gi|16082630|ref|NP_394950.1| |
score: 138.3 |
e-value: 8.9e-32 |
Identity: 40.23% |
Span: 522bp (76.8%) |
Frame: 1 |
| gi|16082630|ref|NP_394950.1| ATPase involved in DNA replication [Thermoplasma acidophilum] |
| Match: gi|10640840|emb|CAC12618.1| |
score: 138.3 |
e-value: 8.9e-32 |
Identity: 40.23% |
Span: 522bp (76.8%) |
Frame: 1 |
| gi|10640840|emb|CAC12618.1| probable replication factor C, 40 KD subunit [Thermoplasma acidophilum] |
| Match: gi|14325757|dbj|BAB60660.1| |
score: 137.9 |
e-value: 1.2e-31 |
Identity: 39.66% |
Span: 522bp (76.8%) |
Frame: 1 |
| gi|14325757|dbj|BAB60660.1| replication factor C subunit [Thermoplasma volcanium] |
| Match: gi|13542322|ref|NP_112010.1| |
score: 137.9 |
e-value: 1.2e-31 |
Identity: 39.66% |
Span: 522bp (76.8%) |
Frame: 1 |
| gi|13542322|ref|NP_112010.1| ATPase involved in DNA replication [Thermoplasma volcanium] |
| Match: gi|29247298|gb|EAA38865.1| |
score: 133.3 |
e-value: 2.9e-30 |
Identity: 40% |
Span: 531bp (78.1%) |
Frame: 1 |
| gi|29247298|gb|EAA38865.1| GLP_61_35037_36092 [Giardia lamblia ATCC 50803] |
| Match: gi|19173253|ref|NP_597056.1| |
score: 132.1 |
e-value: 6.4e-30 |
Identity: 40.46% |
Span: 519bp (76.3%) |
Frame: 1 |
| gi|19173253|ref|NP_597056.1| REPLICATION FACTOR C (ACTIVATOR 1) 37kDa SUBUNIT [Encephalitozoon cuniculi] gi|19171379|... |
| Match: gi|29247790|gb|EAA39342.1| |
score: 130.2 |
e-value: 2.4e-29 |
Identity: 37.99% |
Span: 534bp (78.5%) |
Frame: 1 |
| gi|29247790|gb|EAA39342.1| GLP_177_25642_24674 [Giardia lamblia ATCC 50803] |
| Match: gi|13242558|ref|NP_077572.1| |
score: 129.8 |
e-value: 3.2e-29 |
Identity: 38.51% |
Span: 519bp (76.3%) |
Frame: 1 |
| gi|13242558|ref|NP_077572.1| EsV-1-87 [Ectocarpus siliculosus virus] gi|10697317|gb|AAG21804.1| EsV-1-87 [Ectocarpus ... |
| Match: gi|18976465|ref|NP_577822.1| |
score: 122.5 |
e-value: 5.1e-27 |
Identity: 45.93% |
Span: 405bp (59.6%) |
Frame: 1 |
| gi|18976465|ref|NP_577822.1| replication factor C, small subunit [Pyrococcus furiosus DSM 3638] gi|18892004|gb|AAL802... |
| Match: gi|9453897|dbj|BAB03292.1| |
score: 122.1 |
e-value: 6.6e-27 |
Identity: 47.29% |
Span: 387bp (56.9%) |
Frame: 1 |
| gi|9453897|dbj|BAB03292.1| replication factor C small subunit precursor [Pyrococcus furiosus] |
| Match: gi|14590058|ref|NP_142122.1| |
score: 121.3 |
e-value: 1.1e-26 |
Identity: 45.19% |
Span: 405bp (59.6%) |
Frame: 1 |
| gi|14590058|ref|NP_142122.1| replication factor C subunit [Pyrococcus horikoshii] gi|7521348|pir||F71231 probable rep... |
| Match: gi|27503431|gb|AAH42327.1| |
score: 119 |
e-value: 5.6e-26 |
Identity: 37.97% |
Span: 483bp (71.0%) |
Frame: 1 |
| gi|27503431|gb|AAH42327.1| Similar to replication factor C (activator 1) 3, 38kDa [Danio rerio] |
| Match: gi|19921136|ref|NP_609494.1| |
score: 117.1 |
e-value: 2.1e-25 |
Identity: 33.5% |
Span: 522bp (76.8%) |
Frame: 1 |
| gi|19921136|ref|NP_609494.1| CG6258-PA [Drosophila melanogaster] gi|22946236|gb|AAF53076.2| CG6258-PA [Drosophila mel... |
| Match: gi|28882049|ref|NP_002905.2| |
score: 117.1 |
e-value: 2.1e-25 |
Identity: 36.16% |
Span: 531bp (78.1%) |
Frame: 1 |
| gi|28882049|ref|NP_002905.2| replication factor C 2 (40kD) isoform 2; replication factor C 40 kDa subunit [Homo sapie... |
| Match: gi|30584413|gb|AAP36459.1| |
score: 117.1 |
e-value: 2.1e-25 |
Identity: 36.16% |
Span: 531bp (78.1%) |
Frame: 1 |
| Homo sapiens replication factor C (activator 1) 2, 40kDa [synthetic construct] >gi60652727|gb|AAX29058.1| replication... |
| Match: gi|28317156|gb|AAD46852.2| |
score: 117.1 |
e-value: 2.1e-25 |
Identity: 33.5% |
Span: 522bp (76.8%) |
Frame: 1 |
| gi|28317156|gb|AAD46852.2| LD06837p [Drosophila melanogaster] |
| Match: gi|34870084|ref|XP_213692.2| |
score: 116.3 |
e-value: 3.6e-25 |
Identity: 36.11% |
Span: 462bp (67.9%) |
Frame: 1 |
| gi|34870084|ref|XP_213692.2| similar to Rfc3 protein [Rattus norvegicus] |
| Match: gi|38081654|ref|XP_132528.2| |
score: 115.9 |
e-value: 4.8e-25 |
Identity: 36.11% |
Span: 462bp (67.9%) |
Frame: 1 |
| gi|38081654|ref|XP_132528.2| replication factor C (activator 1) 3 [Mus musculus] gi|30913256|sp|Q8R323|RFC3_MOUSE Act... |
| Match: gi|26335097|dbj|BAC31249.1| |
score: 115.9 |
e-value: 4.8e-25 |
Identity: 36.11% |
Span: 462bp (67.9%) |
Frame: 1 |
| gi|26335097|dbj|BAC31249.1| unnamed protein product [Mus musculus] |
| Match: gi|18976465|ref|NP_577822.1| |
score: 55.84 |
e-value: 5.8e-07 |
Identity: 46.94% |
Span: 147bp (21.6%) |
Frame: 1 |
| gi|18976465|ref|NP_577822.1| replication factor C, small subunit [Pyrococcus furiosus DSM 3638] gi|18892004|gb|AAL802... |
| Match: gi|14590058|ref|NP_142122.1| |
score: 54.3 |
e-value: 1.7e-06 |
Identity: 44.9% |
Span: 147bp (21.6%) |
Frame: 1 |
| gi|14590058|ref|NP_142122.1| replication factor C subunit [Pyrococcus horikoshii] gi|7521348|pir||F71231 probable rep... |
|
| 157 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 43 hits recorded |
| Match: At1g77470.1 |
score: 320.9 |
e-value: 3.5e-88 |
Identity: 75.81% |
Span: 639bp (94.0%) |
Frame: 1 |
| At1g77470.1 68408.m08280 replication factor C -related similar to replication factor C GB:P40937 [Homo sapiens] |
| Match: At1g21690.1 |
score: 174.5 |
e-value: 4.1e-44 |
Identity: 48.09% |
Span: 531bp (78.1%) |
Frame: 1 |
| At1g21690.1 68408.m08840 replication factor -related Similar to gb|M87339 replication factor C, 37-kDa subunit from H... |
| Match: At1g21690.2 |
score: 165.6 |
e-value: 1.9e-41 |
Identity: 47.54% |
Span: 531bp (78.1%) |
Frame: 1 |
| At1g21690.2 68408.m08841 replication factor -related Similar to gb|M87339 replication factor C, 37-kDa subunit from H... |
| Match: At1g63160.1 |
score: 164.5 |
e-value: 4.2e-41 |
Identity: 47.85% |
Span: 558bp (82.1%) |
Frame: 1 |
| At1g63160.1 68408.m06546 replication factor -related similar to GI:4972952 from [Mus musculus] (Mamm. Genome (2000) I... |
| Match: At5g27740.1 |
score: 114 |
e-value: 6.5e-26 |
Identity: 33.33% |
Span: 462bp (67.9%) |
Frame: 1 |
| At5g27740.1 68412.m03032 replication factor C - like replication factor C 38K chain, Homo sapiens, PIR:T09573 |
| Match: At1g24290.1 |
score: 60.46 |
e-value: 8.5e-10 |
Identity: 28% |
Span: 591bp (86.9%) |
Frame: 1 |
| At1g24290.1 68408.m02769 expressed protein contains ATP/GTP-binding site motif A (P-loop) |
| Match: At5g45720.1 |
score: 58.15 |
e-value: 4.2e-09 |
Identity: 23.22% |
Span: 576bp (84.7%) |
Frame: 1 |
| At5g45720.1 68412.m05065 hypothetical protein contains similarity to DNA polymerase III, gamma subunit |
| Match: At2g02480.1 |
score: 53.53 |
e-value: 1e-07 |
Identity: 22.92% |
Span: 516bp (75.9%) |
Frame: 1 |
| At2g02480.1 68409.m00163 prokaryotic DNA polymerase III gamma subunit -related |
| Match: At5g22010.1 |
score: 52.76 |
e-value: 1.8e-07 |
Identity: 21.21% |
Span: 582bp (85.6%) |
Frame: 1 |
| At5g22010.1 68412.m02348 replication factor C large subunit-related temporary automated functional assignment |
| Match: At4g18820.1 |
score: 52.37 |
e-value: 2.3e-07 |
Identity: 21.33% |
Span: 588bp (86.5%) |
Frame: 1 |
| At4g18820.1 68411.m02537 expressed protein DNA polymerase III holoenzyme tau subunit, Thermus thermophilus, gb:AF025391 |
| Match: At1g14460.1 |
score: 52.37 |
e-value: 2.3e-07 |
Identity: 22.28% |
Span: 516bp (75.9%) |
Frame: 1 |
| At1g14460.1 68408.m01549 expressed protein contains similarity to DNA polymerase III gamma and tau subunits |
| Match: At1g04730.1 |
score: 47.75 |
e-value: 5.7e-06 |
Identity: 32.41% |
Span: 324bp (47.6%) |
Frame: 1 |
| At1g04730.1 68408.m00424 hypothetical protein |
| Match: At4g24790.1 |
score: 46.59 |
e-value: 1.3e-05 |
Identity: 20.83% |
Span: 600bp (88.2%) |
Frame: 1 |
| At4g24790.1 68411.m03235 DNA polymerase III like protein DNA polymerase III gamma subunit - Aquifex aeolicus, PIR2:A7... |
| Match: At2g18330.1 |
score: 41.59 |
e-value: 0.00041 |
Identity: 33.33% |
Span: 303bp (44.6%) |
Frame: 1 |
| At2g18330.1 68409.m01928 AAA-type ATPase -related similar to 26S proteosome regulatory subunit 8 |
| Match: At5g08470.1 |
score: 39.28 |
e-value: 0.002 |
Identity: 23.57% |
Span: 414bp (60.9%) |
Frame: 1 |
| At5g08470.1 68412.m00929 expressed protein contains similarity to ATPase; peroxisome biosynthesis protein |
| Match: At4g36580.1 |
score: 39.28 |
e-value: 0.002 |
Identity: 32.43% |
Span: 303bp (44.6%) |
Frame: 1 |
| At4g36580.1 68411.m04721 ATPase-related protein |
| Match: At4g24710.1 |
score: 37.74 |
e-value: 0.006 |
Identity: 64.52% |
Span: 93bp (13.7%) |
Frame: 1 |
| At4g24710.1 68411.m03223 protein -related binding protein HPV16 E1 protein binding protein, Homo sapiens, PATX:G2232019 |
| Match: At3g03060.1 |
score: 37.74 |
e-value: 0.006 |
Identity: 32.43% |
Span: 297bp (43.7%) |
Frame: 1 |
| At3g03060.1 68410.m00275 26S proteosome regulatory subunit -related |
| Match: At5g66130.1 |
score: 37.74 |
e-value: 0.006 |
Identity: 35.09% |
Span: 147bp (21.6%) |
Frame: 1 |
| At5g66130.1 68412.m07537 AtRAD17 (dbj|BAA90479.1) |
| Match: At3g28570.1 |
score: 37.74 |
e-value: 0.006 |
Identity: 47.62% |
Span: 126bp (18.5%) |
Frame: 1 |
| At3g28570.1 68410.m03273 AAA-type ATPase family contains Pfam profile: ATPase family PF00004 |
| Match: At1g05460.1 |
score: 36.96 |
e-value: 0.01 |
Identity: 33.96% |
Span: 159bp (23.4%) |
Frame: 1 |
| At1g05460.1 68408.m00504 RNA helicase SDE3 identical to RNA helicase SDE3 [Arabidopsis thaliana] GI:13811296 |
| Match: At5g17760.2 |
score: 35.81 |
e-value: 0.023 |
Identity: 38.78% |
Span: 120bp (17.6%) |
Frame: 1 |
| At5g17760.2 68412.m01918 BCS1 - like protein h-bcs1, Homo sapiens, EMBL:AF026849 |
| Match: At5g17760.1 |
score: 35.81 |
e-value: 0.023 |
Identity: 38.78% |
Span: 120bp (17.6%) |
Frame: 1 |
| At5g17760.1 68412.m01917 BCS1 - like protein h-bcs1, Homo sapiens, EMBL:AF026849 |
| Match: At1g16800.1 |
score: 35.81 |
e-value: 0.023 |
Identity: 31.3% |
Span: 342bp (50.3%) |
Frame: 1 |
| At1g16800.1 68408.m01821 hypothetical protein |
| Match: At1g77620.1 |
score: 35.42 |
e-value: 0.029 |
Identity: 22.07% |
Span: 312bp (45.9%) |
Frame: 1 |
| At1g77620.1 68408.m08295 hypothetical protein |
| Match: At3g28610.1 |
score: 35.42 |
e-value: 0.029 |
Identity: 37.74% |
Span: 159bp (23.4%) |
Frame: 1 |
| At3g28610.1 68410.m03277 AAA-type ATPase family contains Pfam profile: ATPase family PF00004 |
| Match: At5g17730.1 |
score: 35.04 |
e-value: 0.038 |
Identity: 71.43% |
Span: 63bp (9.3%) |
Frame: 1 |
| At5g17730.1 68412.m01914 AAA-type ATPase family contains Pfam profile: ATPase family PF00004 |
| Match: At2g18193.1 |
score: 35.04 |
e-value: 0.038 |
Identity: 50% |
Span: 120bp (17.6%) |
Frame: 1 |
| At2g18193.1 68409.m01911 AAA-type ATPase family contains Pfam profile: ATPase family PF00004 |
| Match: At4g28000.1 |
score: 34.65 |
e-value: 0.05 |
Identity: 25.93% |
Span: 231bp (34.0%) |
Frame: 1 |
| At4g28000.1 68411.m03659 hypothetical protein MSP1, Saccharomyces cerevisiae, PIR2:A49506 |
| Match: At3g50940.1 |
score: 34.65 |
e-value: 0.05 |
Identity: 37.7% |
Span: 156bp (22.9%) |
Frame: 1 |
| At3g50940.1 68410.m05168 AAA-type ATPase family contains Pfam profile: ATPase family PF00004 |
| Match: At1g73170.1 |
score: 34.27 |
e-value: 0.066 |
Identity: 44.19% |
Span: 129bp (19.0%) |
Frame: 1 |
| At1g73170.1 68408.m07769 ATPase -related contains Pfam profile: PF00004 ATPases associated with various cellular acti... |
| Match: At2g03670.1 |
score: 34.27 |
e-value: 0.066 |
Identity: 66.67% |
Span: 63bp (9.3%) |
Frame: 1 |
| At2g03670.1 68409.m00291 AAA-type ATPase -related similar to CDC48 |
| Match: At3g50930.1 |
score: 34.27 |
e-value: 0.066 |
Identity: 71.43% |
Span: 63bp (9.3%) |
Frame: 1 |
| At3g50930.1 68410.m05167 AAA-type ATPase family contains Pfam profile: ATPase family PF00004 |
| Match: At3g05530.1 |
score: 34.27 |
e-value: 0.066 |
Identity: 32.91% |
Span: 231bp (34.0%) |
Frame: 1 |
| At3g05530.1 68410.m00557 26S proteasome AAA-ATPase subunit RPT5a identical to GB:AAF22525 GI:6652886 from [Arabidopsi... |
| Match: At1g64110.2 |
score: 34.27 |
e-value: 0.066 |
Identity: 24.69% |
Span: 231bp (34.0%) |
Frame: 1 |
| At1g64110.2 68408.m06656 expressed protein similar to hypothetical protein GB:AAF24564 GI:6692099 from [Arabidopsis t... |
| Match: At2g37010.1 |
score: 34.27 |
e-value: 0.066 |
Identity: 26.42% |
Span: 306bp (45.0%) |
Frame: 1 |
| At2g37010.1 68409.m04108 ABC transporter family protein contains ABC transporter domain, Pfam:PF00005 |
| Match: At1g64110.1 |
score: 34.27 |
e-value: 0.066 |
Identity: 24.69% |
Span: 231bp (34.0%) |
Frame: 1 |
| At1g64110.1 68408.m06655 expressed protein similar to hypothetical protein GB:AAF24564 GI:6692099 from [Arabidopsis t... |
| Match: At4g04180.1 |
score: 34.27 |
e-value: 0.066 |
Identity: 30.65% |
Span: 360bp (52.9%) |
Frame: 1 |
| At4g04180.1 68411.m00526 vesicle transfer ATPase -related |
| Match: At4g25835.1 |
score: 33.88 |
e-value: 0.086 |
Identity: 71.43% |
Span: 63bp (9.3%) |
Frame: 1 |
| At4g25835.1 68411.m03383 mitochondrial protein -related Homo sapiens h-bcs1 (BCS1) mRNA, nuclear gene encoding mitoch... |
| Match: At5g57480.1 |
score: 33.88 |
e-value: 0.086 |
Identity: 71.43% |
Span: 63bp (9.3%) |
Frame: 1 |
| At5g57480.1 68412.m06501 hypothetical protein contains similarity to AAA-type ATPase |
| Match: At5g53540.1 |
score: 33.88 |
e-value: 0.086 |
Identity: 50% |
Span: 102bp (15.0%) |
Frame: 1 |
| At5g53540.1 68412.m06019 26S proteasome regulatory particle chain RPT6-related protein |
| Match: At4g30250.1 |
score: 33.88 |
e-value: 0.086 |
Identity: 71.43% |
Span: 63bp (9.3%) |
Frame: 1 |
| At4g30250.1 68411.m03926 AAA-type ATPase family contains Pfam profile: ATPase family PF00004 |
| Match: At2g18190.1 |
score: 33.88 |
e-value: 0.086 |
Identity: 71.43% |
Span: 63bp (9.3%) |
Frame: 1 |
| At2g18190.1 68409.m01910 AAA-type ATPase family contains Pfam profile: ATPase family PF00004 |
|
