| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|224128161|ref|XP_002329096.1| |
score: 191 |
e-value: 5e-47 |
Identity: 52.81% |
Span: 531bp (78.0%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222869765|gb|EEF06896.1| predicted protein [Populus trichocarpa] |
| Match: gi|255573345|ref|XP_002527599.1| |
score: 185 |
e-value: 4e-45 |
Identity: 48.15% |
Span: 555bp (81.5%) |
Frame: 1 |
| rnf5, putative [Ricinus communis] >gi223533016|gb|EEF34780.1| rnf5, putative [Ricinus communis] |
| Match: gi|225461411|ref|XP_002282248.1| |
score: 180 |
e-value: 1e-43 |
Identity: 49.21% |
Span: 555bp (81.5%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|224114956|ref|XP_002316902.1| |
score: 179 |
e-value: 3e-43 |
Identity: 50% |
Span: 531bp (78.0%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222859967|gb|EEE97514.1| predicted protein [Populus trichocarpa] |
| Match: gi|255640217|gb|ACU20399.1| |
score: 156 |
e-value: 1e-36 |
Identity: 44.21% |
Span: 555bp (81.5%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|270230993|emb|CBI20320.1| |
score: 154 |
e-value: 6e-36 |
Identity: 60.16% |
Span: 366bp (53.7%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|22795037|gb|AAN05420.1| |
score: 153 |
e-value: 2e-35 |
Identity: 46.89% |
Span: 522bp (76.7%) |
Frame: 1 |
| putative RING protein [Populus tremula x Populus alba] |
| Match: gi|4972072|emb|CAB43879.1| |
score: 152 |
e-value: 2e-35 |
Identity: 44.86% |
Span: 543bp (79.7%) |
Frame: 1 |
| putative RING zinc finger protein [Arabidopsis thaliana] >gi7269601|emb|CAB81397.1| putative RING zinc finger protein... |
| Match: gi|30687607|ref|NP_194477.2| |
score: 152 |
e-value: 2e-35 |
Identity: 44.86% |
Span: 543bp (79.7%) |
Frame: 1 |
| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] >gi27311647|gb|AAO00789.1| putative RING z... |
| Match: gi|224125502|ref|XP_002329821.1| |
score: 152 |
e-value: 4e-35 |
Identity: 46.89% |
Span: 522bp (76.7%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi118484396|gb|ABK94075.1| unknown [Populus trichocarpa] >gi|222870883|gb|EE... |
| Match: gi|224077116|ref|XP_002305139.1| |
score: 149 |
e-value: 3e-34 |
Identity: 45.45% |
Span: 519bp (76.2%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222848103|gb|EEE85650.1| predicted protein [Populus trichocarpa] |
| Match: gi|255556043|ref|XP_002519056.1| |
score: 142 |
e-value: 4e-32 |
Identity: 42.46% |
Span: 522bp (76.7%) |
Frame: 1 |
| rnf5, putative [Ricinus communis] >gi223541719|gb|EEF43267.1| rnf5, putative [Ricinus communis] |
| Match: gi|255637671|gb|ACU19159.1| |
score: 137 |
e-value: 1e-30 |
Identity: 60.19% |
Span: 309bp (45.4%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|225468785|ref|XP_002262822.1| |
score: 137 |
e-value: 1e-30 |
Identity: 44.69% |
Span: 522bp (76.7%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147810574|emb|CAN63097.1| hypothetical protein [Vitis vinifera] |
| Match: gi|225446337|ref|XP_002272136.1| |
score: 130 |
e-value: 9e-29 |
Identity: 39.43% |
Span: 501bp (73.6%) |
Frame: 1 |
| PREDICTED: similar to ring domain containing protein isoform 2 [Vitis vinifera] >gi225446339|ref|XP_002272107.1| PRED... |
| Match: gi|224127182|ref|XP_002329420.1| |
score: 130 |
e-value: 1e-28 |
Identity: 40% |
Span: 516bp (75.8%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222870470|gb|EEF07601.1| predicted protein [Populus trichocarpa] |
| Match: gi|255638201|gb|ACU19414.1| |
score: 129 |
e-value: 3e-28 |
Identity: 45.14% |
Span: 426bp (62.6%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|255639433|gb|ACU20011.1| |
score: 127 |
e-value: 7e-28 |
Identity: 41.42% |
Span: 501bp (73.6%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|255635730|gb|ACU18214.1| |
score: 127 |
e-value: 7e-28 |
Identity: 53.15% |
Span: 327bp (48.0%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|270238638|emb|CBI25895.1| |
score: 127 |
e-value: 1e-27 |
Identity: 54.31% |
Span: 342bp (50.2%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|255553769|ref|XP_002517925.1| |
score: 124 |
e-value: 1e-26 |
Identity: 38.37% |
Span: 501bp (73.6%) |
Frame: 1 |
| rnf5, putative [Ricinus communis] >gi223542907|gb|EEF44443.1| rnf5, putative [Ricinus communis] |
| Match: gi|255538544|ref|XP_002510337.1| |
score: 122 |
e-value: 3e-26 |
Identity: 37.43% |
Span: 513bp (75.3%) |
Frame: 1 |
| rnf5, putative [Ricinus communis] >gi223551038|gb|EEF52524.1| rnf5, putative [Ricinus communis] |
| Match: gi|217071982|gb|ACJ84351.1| |
score: 122 |
e-value: 3e-26 |
Identity: 51.28% |
Span: 336bp (49.3%) |
Frame: 1 |
| unknown [Medicago truncatula] |
| Match: gi|224121892|ref|XP_002330679.1| |
score: 122 |
e-value: 4e-26 |
Identity: 40.99% |
Span: 474bp (69.6%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222872283|gb|EEF09414.1| predicted protein [Populus trichocarpa] |
| Match: gi|18394721|ref|NP_564078.1| |
score: 120 |
e-value: 1e-25 |
Identity: 39.02% |
Span: 489bp (71.8%) |
Frame: 1 |
| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] >gi8778447|gb|AAF79455.1|AC025808_37 F18O1... |
|
| 224 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 12 hits recorded |
| Match: At4G27470.1 |
score: 152 |
e-value: 1e-37 |
Identity: 44.86% |
Span: 543bp (79.7%) |
Frame: 1 |
| zinc finger (C3HC4-type RING finger) family protein | chr4:13735582-13736313 FORWARD |
| Match: At1G19310.1 |
score: 120 |
e-value: 7e-28 |
Identity: 39.02% |
Span: 489bp (71.8%) |
Frame: 1 |
| zinc finger (C3HC4-type RING finger) family protein | chr1:6676415-6677095 REVERSE |
| Match: At1G74990.1 |
score: 112 |
e-value: 2e-25 |
Identity: 42.28% |
Span: 444bp (65.2%) |
Frame: 1 |
| zinc finger (C3HC4-type RING finger) family protein | chr1:28163498-28163911 REVERSE |
| Match: At4G03510.2 |
score: 110 |
e-value: 8e-25 |
Identity: 36.93% |
Span: 522bp (76.7%) |
Frame: 1 |
| Symbols: RMA1 | RMA1 (Ring finger protein with Membrane Anchor 1); protein binding / ubiquitin-protein ligase/ zinc ... |
| Match: At4G03510.1 |
score: 110 |
e-value: 8e-25 |
Identity: 36.93% |
Span: 522bp (76.7%) |
Frame: 1 |
| Symbols: RMA1 | RMA1 (Ring finger protein with Membrane Anchor 1); protein binding / ubiquitin-protein ligase/ zinc ... |
| Match: At2G42030.1 |
score: 108 |
e-value: 4e-24 |
Identity: 41.86% |
Span: 387bp (56.8%) |
Frame: 1 |
| zinc finger (C3HC4-type RING finger) family protein | chr2:17546147-17547424 REVERSE |
| Match: At3G58030.3 |
score: 107 |
e-value: 5e-24 |
Identity: 40.31% |
Span: 387bp (56.8%) |
Frame: 1 |
| zinc finger (C3HC4-type RING finger) family protein | chr3:21496504-21497814 FORWARD |
| Match: At3G58030.2 |
score: 107 |
e-value: 5e-24 |
Identity: 40.31% |
Span: 387bp (56.8%) |
Frame: 1 |
| zinc finger (C3HC4-type RING finger) family protein | chr3:21496504-21497814 FORWARD |
| Match: At3G58030.1 |
score: 107 |
e-value: 5e-24 |
Identity: 40.31% |
Span: 387bp (56.8%) |
Frame: 1 |
| zinc finger (C3HC4-type RING finger) family protein | chr3:21496504-21497814 FORWARD |
| Match: At2G23780.1 |
score: 100 |
e-value: 6e-22 |
Identity: 34.1% |
Span: 504bp (74.0%) |
Frame: 1 |
| zinc finger (C3HC4-type RING finger) family protein | chr2:10130631-10131314 REVERSE |
| Match: At4G28270.1 |
score: 100 |
e-value: 8e-22 |
Identity: 49.46% |
Span: 258bp (37.9%) |
Frame: 1 |
| zinc finger (C3HC4-type RING finger) family protein | chr4:14007620-14008201 REVERSE |
| Match: At2G44410.1 |
score: 87.8 |
e-value: 5e-18 |
Identity: 32.5% |
Span: 360bp (52.9%) |
Frame: 1 |
| protein binding / zinc ion binding | chr2:18335949-18337190 FORWARD |
|
| swissprot [blastx] | Showing best 10 hits recorded |
| Match: Q09463 |
score: 97.1 |
e-value: 9e-20 |
Identity: 45.63% |
Span: 306bp (44.9%) |
Frame: 1 |
| RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5 PE=1 SV=1 |
| Match: Q568Y3 |
score: 94.7 |
e-value: 5e-19 |
Identity: 44% |
Span: 300bp (44.1%) |
Frame: 1 |
| RING finger protein 185 OS=Rattus norvegicus GN=Rnf185 PE=2 SV=1 |
| Match: Q91YT2 |
score: 94.7 |
e-value: 5e-19 |
Identity: 44% |
Span: 300bp (44.1%) |
Frame: 1 |
| RING finger protein 185 OS=Mus musculus GN=Rnf185 PE=2 SV=1 |
| Match: Q5ZIR9 |
score: 93.6 |
e-value: 1e-18 |
Identity: 44.21% |
Span: 285bp (41.9%) |
Frame: 1 |
| RING finger protein 185 OS=Gallus gallus GN=RNF185 PE=2 SV=1 |
| Match: Q5RFK9 |
score: 93.2 |
e-value: 1e-18 |
Identity: 44.33% |
Span: 291bp (42.7%) |
Frame: 1 |
| RING finger protein 185 OS=Pongo abelii GN=RNF185 PE=2 SV=1 |
| Match: Q96GF1 |
score: 93.2 |
e-value: 1e-18 |
Identity: 44.33% |
Span: 291bp (42.7%) |
Frame: 1 |
| RING finger protein 185 OS=Homo sapiens GN=RNF185 PE=2 SV=1 |
| Match: Q99942 |
score: 91.3 |
e-value: 5e-18 |
Identity: 46.67% |
Span: 270bp (39.6%) |
Frame: 1 |
| E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens GN=RNF5 PE=1 SV=1 |
| Match: Q6PC78 |
score: 91.3 |
e-value: 5e-18 |
Identity: 43.62% |
Span: 282bp (41.4%) |
Frame: 1 |
| RING finger protein 185 OS=Danio rerio GN=rnf185 PE=2 SV=1 |
| Match: Q5M807 |
score: 90.9 |
e-value: 7e-18 |
Identity: 41.58% |
Span: 303bp (44.5%) |
Frame: 1 |
| E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus GN=Rnf5 PE=2 SV=1 |
| Match: O35445 |
score: 90.9 |
e-value: 7e-18 |
Identity: 41.58% |
Span: 303bp (44.5%) |
Frame: 1 |
| E3 ubiquitin-protein ligase RNF5 OS=Mus musculus GN=Rnf5 PE=1 SV=1 |
|
