| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|255562011|ref|XP_002522014.1| |
score: 232 |
e-value: 3e-59 |
Identity: 91.27% |
Span: 378bp (55.4%) |
Frame: 3 |
| DNA-directed RNA polymerase II, putative [Ricinus communis] >gi223538818|gb|EEF40418.1| DNA-directed RNA polymerase I... |
| Match: gi|224083811|ref|XP_002307132.1| |
score: 231 |
e-value: 4e-59 |
Identity: 91.27% |
Span: 378bp (55.4%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi224096326|ref|XP_002310604.1| predicted protein [Populus trichocarpa] >gi|... |
| Match: gi|225446712|ref|XP_002282413.1| |
score: 231 |
e-value: 4e-59 |
Identity: 91.27% |
Span: 378bp (55.4%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147856183|emb|CAN80281.1| hypothetical protein [Vitis vinifera] >... |
| Match: gi|255625623|gb|ACU13156.1| |
score: 230 |
e-value: 8e-59 |
Identity: 91.27% |
Span: 378bp (55.4%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|255632071|gb|ACU16388.1| |
score: 228 |
e-value: 3e-58 |
Identity: 89.68% |
Span: 378bp (55.4%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|255632992|gb|ACU16850.1| |
score: 225 |
e-value: 3e-57 |
Identity: 91.06% |
Span: 369bp (54.1%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|146403790|gb|ABQ32301.1| |
score: 222 |
e-value: 2e-56 |
Identity: 86.51% |
Span: 378bp (55.4%) |
Frame: 3 |
| putative 15.9 kDa subunit of RNA polymerase II [Artemisia annua] |
| Match: gi|15242547|ref|NP_196554.1| |
score: 221 |
e-value: 7e-56 |
Identity: 84.13% |
Span: 378bp (55.4%) |
Frame: 3 |
| NRPB4; DNA-directed RNA polymerase [Arabidopsis thaliana] >gi2760362|gb|AAB95261.1| 15.9 kDa subunit of RNA polymeras... |
| Match: gi|192910802|gb|ACF06509.1| |
score: 220 |
e-value: 1e-55 |
Identity: 86.51% |
Span: 378bp (55.4%) |
Frame: 3 |
| RNA polymerase II 15.9 kDa subunit [Elaeis guineensis] |
| Match: gi|115443807|ref|NP_001045683.1| |
score: 195 |
e-value: 4e-48 |
Identity: 75.38% |
Span: 378bp (55.4%) |
Frame: 3 |
| Os02g0116900 [Oryza sativa (japonica cultivar-group)] >gi41052832|dbj|BAD07723.1| putative 15.9 kDa subunit of RNA po... |
| Match: gi|242063790|ref|XP_002453184.1| |
score: 192 |
e-value: 2e-47 |
Identity: 75.57% |
Span: 378bp (55.4%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_04g001250 [Sorghum bicolor] >gi241933015|gb|EES06160.1| hypothetical protein SORBIDRA... |
| Match: gi|226497040|ref|NP_001148722.1| |
score: 191 |
e-value: 6e-47 |
Identity: 74.24% |
Span: 378bp (55.4%) |
Frame: 3 |
| DNA-directed RNA polymerase II 16 kDa polypeptide [Zea mays] >gi226958433|ref|NP_001152952.1| LOC100285981 [Zea mays]... |
| Match: gi|168028875|ref|XP_001766952.1| |
score: 189 |
e-value: 2e-46 |
Identity: 72.22% |
Span: 378bp (55.4%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162681694|gb|EDQ68118.1| predicted protein [Physcomitrella... |
| Match: gi|217426791|gb|ACK44499.1| |
score: 185 |
e-value: 3e-45 |
Identity: 86.41% |
Span: 309bp (45.3%) |
Frame: 3 |
| AT5G09920-like protein [Arabidopsis arenosa] |
| Match: gi|72255603|gb|AAZ66921.1| |
score: 142 |
e-value: 4e-32 |
Identity: 66.67% |
Span: 306bp (44.9%) |
Frame: 3 |
| 117M18_2 [Brassica rapa] |
| Match: gi|194222103|ref|XP_001499044.2| |
score: 96.7 |
e-value: 2e-18 |
Identity: 38.71% |
Span: 372bp (54.5%) |
Frame: 3 |
| PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB4 (RNA polymerase II subunit B4) (DNA-directed RNA po... |
| Match: gi|225468957|ref|XP_002274855.1| |
score: 96.3 |
e-value: 2e-18 |
Identity: 42.61% |
Span: 345bp (50.6%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270237444|emb|CBI25730.1| unnamed protein product [Vitis vinifera] |
| Match: gi|156383638|ref|XP_001632940.1| |
score: 95.9 |
e-value: 3e-18 |
Identity: 38.52% |
Span: 366bp (53.7%) |
Frame: 3 |
| predicted protein [Nematostella vectensis] >gi156220003|gb|EDO40877.1| predicted protein [Nematostella vectensis] |
| Match: gi|126325917|ref|XP_001366384.1| |
score: 95.5 |
e-value: 4e-18 |
Identity: 38.52% |
Span: 366bp (53.7%) |
Frame: 3 |
| PREDICTED: similar to RNA polymerase II subunit hsRPB4 [Monodelphis domestica] |
| Match: gi|118094833|ref|XP_422576.2| |
score: 95.5 |
e-value: 4e-18 |
Identity: 38.52% |
Span: 366bp (53.7%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Gallus gallus] >gi224059707|ref|XP_002191414.1| PREDICTED: putative DNA directed RNA... |
| Match: gi|109104556|ref|XP_001090528.1| |
score: 95.5 |
e-value: 4e-18 |
Identity: 38.52% |
Span: 366bp (53.7%) |
Frame: 3 |
| PREDICTED: polymerase (RNA) II (DNA directed) polypeptide D isoform 2 [Macaca mulatta] |
| Match: gi|115497864|ref|NP_001069926.1| |
score: 95.5 |
e-value: 4e-18 |
Identity: 38.52% |
Span: 366bp (53.7%) |
Frame: 3 |
| RNA polymerase II polypeptide D [Bos taurus] >gi94574089|gb|AAI16156.1| Polymerase (RNA) II (DNA directed) polypeptid... |
| Match: gi|83754528|pdb|2C35|A |
score: 95.5 |
e-value: 4e-18 |
Identity: 38.52% |
Span: 366bp (53.7%) |
Frame: 3 |
| Chain A, Subunits Rpb4 And Rpb7 Of Human Rna Polymerase Ii >gi83754530|pdb|2C35|C Chain C, Subunits Rpb4 And Rpb7 Of ... |
| Match: gi|4758574|ref|NP_004796.1| |
score: 95.5 |
e-value: 4e-18 |
Identity: 38.52% |
Span: 366bp (53.7%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit RPB4 [Homo sapiens] >gi21312246|ref|NP_081278.1| DNA-directed RNA polymerase I... |
| Match: gi|198434387|ref|XP_002127588.1| |
score: 94.7 |
e-value: 7e-18 |
Identity: 39.34% |
Span: 366bp (53.7%) |
Frame: 3 |
| PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide D [Ciona intestinalis] |
|
| 69 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 1 hits recorded |
| Match: At5G09920.1 |
score: 221 |
e-value: 4e-58 |
Identity: 84.13% |
Span: 378bp (55.4%) |
Frame: 3 |
| Symbols: RPB15.9.9, RPB15.9 | RPB15.9 (RNA polymerase II 15.9) | chr5:3096277-3097371 FORWARD |
|
| swissprot [blastx] | Showing best 4 hits recorded |
| Match: Q9D7M8 |
score: 95.5 |
e-value: 3e-19 |
Identity: 38.52% |
Span: 366bp (53.7%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit RPB4 OS=Mus musculus GN=Polr2d PE=2 SV=2 |
| Match: O15514 |
score: 95.5 |
e-value: 3e-19 |
Identity: 38.52% |
Span: 366bp (53.7%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit RPB4 OS=Homo sapiens GN=POLR2D PE=1 SV=1 |
| Match: Q54S04 |
score: 85.1 |
e-value: 4e-16 |
Identity: 36.15% |
Span: 351bp (51.5%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit rpb4 OS=Dictyostelium discoideum GN=polr2d PE=3 SV=1 |
| Match: Q9VEA5 |
score: 80.9 |
e-value: 7e-15 |
Identity: 36.52% |
Span: 345bp (50.6%) |
Frame: 3 |
| DNA-directed RNA polymerase II 16 kDa polypeptide OS=Drosophila melanogaster GN=Rpb4 PE=1 SV=5 |
|
