| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|226504910|ref|NP_001152573.1| |
score: 168 |
e-value: 4e-40 |
Identity: 95.4% |
Span: 261bp (38.2%) |
Frame: -1 |
| SAD1 [Zea mays] >gi226528898|ref|NP_001149693.1| SAD1 [Zea mays] >gi|242090409|ref|XP_002441037.1| hypothetical prote... |
| Match: gi|115463665|ref|NP_001055432.1| |
score: 168 |
e-value: 4e-40 |
Identity: 95.4% |
Span: 261bp (38.2%) |
Frame: -1 |
| Os05g0389300 [Oryza sativa (japonica cultivar-group)] >gi54287604|gb|AAV31348.1| putative snRNA associated protein [O... |
| Match: gi|255628297|gb|ACU14493.1| |
score: 167 |
e-value: 1e-39 |
Identity: 95.35% |
Span: 258bp (37.8%) |
Frame: -1 |
| unknown [Glycine max] |
| Match: gi|224059779|ref|XP_002299989.1| |
score: 166 |
e-value: 1e-39 |
Identity: 93.18% |
Span: 264bp (38.7%) |
Frame: -1 |
| predicted protein [Populus trichocarpa] >gi224103927|ref|XP_002313247.1| predicted protein [Populus trichocarpa] >gi|... |
| Match: gi|225433436|ref|XP_002285668.1| |
score: 166 |
e-value: 1e-39 |
Identity: 96.51% |
Span: 258bp (37.8%) |
Frame: -1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270248226|emb|CBI33362.1| unnamed protein product [Vitis vinifera] |
| Match: gi|255633598|gb|ACU17158.1| |
score: 165 |
e-value: 3e-39 |
Identity: 94.19% |
Span: 258bp (37.8%) |
Frame: -1 |
| unknown [Glycine max] |
| Match: gi|15239727|ref|NP_199698.1| |
score: 163 |
e-value: 1e-38 |
Identity: 92.94% |
Span: 255bp (37.3%) |
Frame: -1 |
| SAD1 (SUPERSENSITIVE TO ABA AND DROUGHT 1); RNA binding [Arabidopsis thaliana] >gi9758886|dbj|BAB09440.1| U6 snRNA-as... |
| Match: gi|168009596|ref|XP_001757491.1| |
score: 162 |
e-value: 3e-38 |
Identity: 92.94% |
Span: 255bp (37.3%) |
Frame: -1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162691185|gb|EDQ77548.1| predicted protein [Physcomitrella... |
| Match: gi|116779179|gb|ABK21171.1| |
score: 162 |
e-value: 3e-38 |
Identity: 96.39% |
Span: 249bp (36.5%) |
Frame: -1 |
| unknown [Picea sitchensis] >gi116779217|gb|ABK21184.1| unknown [Picea sitchensis] >gi|224285498|gb|ACN40469.1| unknow... |
| Match: gi|110739170|dbj|BAF01501.1| |
score: 161 |
e-value: 5e-38 |
Identity: 93.98% |
Span: 249bp (36.5%) |
Frame: -1 |
| Sm-like protein [Arabidopsis thaliana] |
| Match: gi|226462961|gb|EEH60239.1| |
score: 152 |
e-value: 2e-35 |
Identity: 81.4% |
Span: 258bp (37.8%) |
Frame: -1 |
| predicted protein [Micromonas pusilla CCMP1545] |
| Match: gi|255080076|ref|XP_002503618.1| |
score: 150 |
e-value: 1e-34 |
Identity: 82.35% |
Span: 255bp (37.3%) |
Frame: -1 |
| predicted protein [Micromonas sp. RCC299] >gi226518885|gb|ACO64876.1| predicted protein [Micromonas sp. RCC299] |
| Match: gi|159474956|ref|XP_001695589.1| |
score: 144 |
e-value: 6e-33 |
Identity: 83.13% |
Span: 249bp (36.5%) |
Frame: -1 |
| Sm-E protein [Chlamydomonas reinhardtii] >gi158275600|gb|EDP01376.1| Sm-E protein [Chlamydomonas reinhardtii] |
| Match: gi|154426284|ref|NP_001093908.1| |
score: 138 |
e-value: 4e-31 |
Identity: 71.11% |
Span: 270bp (39.5%) |
Frame: -1 |
| LSM5 homolog, U6 small nuclear RNA associated [Danio rerio] >gi152012711|gb|AAI50415.1| Zgc:171959 protein [Danio rerio] |
| Match: gi|145348592|ref|XP_001418730.1| |
score: 137 |
e-value: 7e-31 |
Identity: 71.74% |
Span: 270bp (39.5%) |
Frame: -1 |
| predicted protein [Ostreococcus lucimarinus CCE9901] >gi144578960|gb|ABO97023.1| predicted protein [Ostreococcus luci... |
| Match: gi|6912488|ref|NP_036454.1| |
score: 137 |
e-value: 7e-31 |
Identity: 72.22% |
Span: 270bp (39.5%) |
Frame: -1 |
| U6 snRNA-associated Sm-like protein LSm5 isoform a [Homo sapiens] >gi13384942|ref|NP_079796.1| U6 snRNA-associated Sm... |
| Match: gi|224092156|ref|XP_002190477.1| |
score: 137 |
e-value: 1e-30 |
Identity: 72.22% |
Span: 270bp (39.5%) |
Frame: -1 |
| PREDICTED: putative u6 snRNA-associated Sm-like protein [Taeniopygia guttata] >gi197129593|gb|ACH46091.1| putative u6... |
| Match: gi|261245080|ref|NP_001140132.1| |
score: 137 |
e-value: 1e-30 |
Identity: 71.11% |
Span: 270bp (39.5%) |
Frame: -1 |
| U6 snRNA-associated Sm-like protein LSm5 [Salmo salar] >gi221220780|gb|ACM09051.1| U6 snRNA-associated Sm-like protei... |
| Match: gi|47225103|emb|CAF98730.1| |
score: 136 |
e-value: 2e-30 |
Identity: 72.41% |
Span: 261bp (38.2%) |
Frame: -1 |
| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|229366148|gb|ACQ58054.1| |
score: 136 |
e-value: 2e-30 |
Identity: 71.11% |
Span: 270bp (39.5%) |
Frame: -1 |
| U6 snRNA-associated Sm-like protein LSm5 [Anoplopoma fimbria] |
| Match: gi|213982795|ref|NP_001135569.1| |
score: 136 |
e-value: 2e-30 |
Identity: 72.22% |
Span: 270bp (39.5%) |
Frame: -1 |
| U6 snRNA-associated Sm-like protein LSm5 [Xenopus (Silurana) tropicalis] >gi195539827|gb|AAI68072.1| Unknown (protein... |
| Match: gi|73967234|ref|XP_854453.1| |
score: 136 |
e-value: 2e-30 |
Identity: 72.22% |
Span: 270bp (39.5%) |
Frame: -1 |
| PREDICTED: similar to LSM5 homolog, U6 small nuclear RNA associated [Canis familiaris] |
| Match: gi|197129592|gb|ACH46090.1| |
score: 135 |
e-value: 3e-30 |
Identity: 71.11% |
Span: 270bp (39.5%) |
Frame: -1 |
| putative u6 snRNA-associated Sm-like protein [Taeniopygia guttata] |
| Match: gi|198425042|ref|XP_002126895.1| |
score: 135 |
e-value: 5e-30 |
Identity: 78.31% |
Span: 249bp (36.5%) |
Frame: -1 |
| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm5 [Ciona intestinalis] |
| Match: gi|242023983|ref|XP_002432410.1| |
score: 134 |
e-value: 6e-30 |
Identity: 72.22% |
Span: 270bp (39.5%) |
Frame: -1 |
| conserved hypothetical protein [Pediculus humanus corporis] >gi212517833|gb|EEB19672.1| conserved hypothetical protei... |
|
| 101 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 1 hits recorded |
| Match: At5G48870.1 |
score: 163 |
e-value: 8e-41 |
Identity: 92.94% |
Span: 255bp (37.3%) |
Frame: -1 |
| Symbols: SAD1 | SAD1 (SUPERSENSITIVE TO ABA AND DROUGHT 1) | chr5:19830633-19831588 FORWARD |
|
| swissprot [blastx] | Showing best 7 hits recorded |
| Match: Q5R628 |
score: 137 |
e-value: 5e-32 |
Identity: 72.22% |
Span: 270bp (39.5%) |
Frame: -1 |
| U6 snRNA-associated Sm-like protein LSm5 OS=Pongo abelii GN=LSM5 PE=3 SV=3 |
| Match: P62322 |
score: 137 |
e-value: 5e-32 |
Identity: 72.22% |
Span: 270bp (39.5%) |
Frame: -1 |
| U6 snRNA-associated Sm-like protein LSm5 OS=Mus musculus GN=Lsm5 PE=3 SV=2 |
| Match: Q9Y4Y9 |
score: 137 |
e-value: 5e-32 |
Identity: 72.22% |
Span: 270bp (39.5%) |
Frame: -1 |
| U6 snRNA-associated Sm-like protein LSm5 OS=Homo sapiens GN=LSM5 PE=1 SV=3 |
| Match: Q2HJH0 |
score: 137 |
e-value: 5e-32 |
Identity: 72.22% |
Span: 270bp (39.5%) |
Frame: -1 |
| U6 snRNA-associated Sm-like protein LSm5 OS=Bos taurus GN=LSM5 PE=3 SV=3 |
| Match: Q55EX5 |
score: 117 |
e-value: 9e-26 |
Identity: 67.5% |
Span: 240bp (35.1%) |
Frame: -1 |
| Probable U6 snRNA-associated Sm-like protein LSm5 OS=Dictyostelium discoideum GN=lsm5 PE=3 SV=1 |
| Match: O42978 |
score: 91.3 |
e-value: 5e-18 |
Identity: 55.84% |
Span: 231bp (33.8%) |
Frame: -1 |
| U6 snRNA-associated Sm-like protein LSm5 OS=Schizosaccharomyces pombe GN=lsm5 PE=2 SV=2 |
| Match: P40089 |
score: 71.2 |
e-value: 6e-12 |
Identity: 46.91% |
Span: 228bp (33.4%) |
Frame: -1 |
| U6 snRNA-associated Sm-like protein LSm5 OS=Saccharomyces cerevisiae GN=LSM5 PE=1 SV=1 |
|
