| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|225461411|ref|XP_002282248.1| |
score: 213 |
e-value: 1e-53 |
Identity: 54.98% |
Span: 600bp (87.8%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|224128161|ref|XP_002329096.1| |
score: 189 |
e-value: 2e-46 |
Identity: 50.94% |
Span: 594bp (87.0%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222869765|gb|EEF06896.1| predicted protein [Populus trichocarpa] |
| Match: gi|255573345|ref|XP_002527599.1| |
score: 182 |
e-value: 3e-44 |
Identity: 47.87% |
Span: 573bp (83.9%) |
Frame: 3 |
| rnf5, putative [Ricinus communis] >gi223533016|gb|EEF34780.1| rnf5, putative [Ricinus communis] |
| Match: gi|270230993|emb|CBI20320.1| |
score: 180 |
e-value: 1e-43 |
Identity: 48.53% |
Span: 600bp (87.8%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|224114956|ref|XP_002316902.1| |
score: 172 |
e-value: 3e-41 |
Identity: 46.7% |
Span: 594bp (87.0%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222859967|gb|EEE97514.1| predicted protein [Populus trichocarpa] |
| Match: gi|225468785|ref|XP_002262822.1| |
score: 166 |
e-value: 1e-39 |
Identity: 45.12% |
Span: 600bp (87.8%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147810574|emb|CAN63097.1| hypothetical protein [Vitis vinifera] |
| Match: gi|255556043|ref|XP_002519056.1| |
score: 165 |
e-value: 3e-39 |
Identity: 44.19% |
Span: 600bp (87.8%) |
Frame: 3 |
| rnf5, putative [Ricinus communis] >gi223541719|gb|EEF43267.1| rnf5, putative [Ricinus communis] |
| Match: gi|255640217|gb|ACU20399.1| |
score: 164 |
e-value: 6e-39 |
Identity: 48.53% |
Span: 573bp (83.9%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|224121892|ref|XP_002330679.1| |
score: 162 |
e-value: 3e-38 |
Identity: 41.12% |
Span: 594bp (87.0%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222872283|gb|EEF09414.1| predicted protein [Populus trichocarpa] |
| Match: gi|224125502|ref|XP_002329821.1| |
score: 162 |
e-value: 4e-38 |
Identity: 45.07% |
Span: 600bp (87.8%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi118484396|gb|ABK94075.1| unknown [Populus trichocarpa] >gi|222870883|gb|EE... |
| Match: gi|22795037|gb|AAN05420.1| |
score: 162 |
e-value: 4e-38 |
Identity: 44.13% |
Span: 600bp (87.8%) |
Frame: 3 |
| putative RING protein [Populus tremula x Populus alba] |
| Match: gi|224127182|ref|XP_002329420.1| |
score: 161 |
e-value: 5e-38 |
Identity: 42.33% |
Span: 594bp (87.0%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222870470|gb|EEF07601.1| predicted protein [Populus trichocarpa] |
| Match: gi|255639433|gb|ACU20011.1| |
score: 160 |
e-value: 1e-37 |
Identity: 45.85% |
Span: 597bp (87.4%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|255637671|gb|ACU19159.1| |
score: 159 |
e-value: 2e-37 |
Identity: 45.89% |
Span: 600bp (87.8%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|225446337|ref|XP_002272136.1| |
score: 158 |
e-value: 5e-37 |
Identity: 43.66% |
Span: 594bp (87.0%) |
Frame: 3 |
| PREDICTED: similar to ring domain containing protein isoform 2 [Vitis vinifera] >gi225446339|ref|XP_002272107.1| PRED... |
| Match: gi|255635730|gb|ACU18214.1| |
score: 152 |
e-value: 4e-35 |
Identity: 41.86% |
Span: 597bp (87.4%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|224077116|ref|XP_002305139.1| |
score: 150 |
e-value: 1e-34 |
Identity: 42.72% |
Span: 600bp (87.8%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222848103|gb|EEE85650.1| predicted protein [Populus trichocarpa] |
| Match: gi|255638201|gb|ACU19414.1| |
score: 149 |
e-value: 2e-34 |
Identity: 42.18% |
Span: 597bp (87.4%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|255553769|ref|XP_002517925.1| |
score: 147 |
e-value: 7e-34 |
Identity: 40.86% |
Span: 522bp (76.4%) |
Frame: 3 |
| rnf5, putative [Ricinus communis] >gi223542907|gb|EEF44443.1| rnf5, putative [Ricinus communis] |
| Match: gi|30687607|ref|NP_194477.2| |
score: 144 |
e-value: 1e-32 |
Identity: 42.31% |
Span: 588bp (86.1%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] >gi27311647|gb|AAO00789.1| putative RING z... |
| Match: gi|41059804|gb|AAR99376.1| |
score: 142 |
e-value: 3e-32 |
Identity: 39.9% |
Span: 588bp (86.1%) |
Frame: 3 |
| ring domain containing protein [Capsicum annuum] |
| Match: gi|4972072|emb|CAB43879.1| |
score: 142 |
e-value: 4e-32 |
Identity: 42.23% |
Span: 582bp (85.2%) |
Frame: 3 |
| putative RING zinc finger protein [Arabidopsis thaliana] >gi7269601|emb|CAB81397.1| putative RING zinc finger protein... |
| Match: gi|15236326|ref|NP_192260.1| |
score: 127 |
e-value: 1e-27 |
Identity: 40.98% |
Span: 594bp (87.0%) |
Frame: 3 |
| RMA1; protein binding / ubiquitin-protein ligase/ zinc ion binding [Arabidopsis thaliana] >gi42572819|ref|NP_974506.1... |
| Match: gi|270238638|emb|CBI25895.1| |
score: 125 |
e-value: 3e-27 |
Identity: 48% |
Span: 369bp (54.0%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|217071982|gb|ACJ84351.1| |
score: 121 |
e-value: 7e-26 |
Identity: 38.35% |
Span: 588bp (86.1%) |
Frame: 3 |
| unknown [Medicago truncatula] |
|
| 215 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 12 hits recorded |
| Match: At4G27470.1 |
score: 144 |
e-value: 6e-35 |
Identity: 42.31% |
Span: 588bp (86.1%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr4:13735582-13736313 FORWARD |
| Match: At4G03510.2 |
score: 127 |
e-value: 8e-30 |
Identity: 40.98% |
Span: 594bp (87.0%) |
Frame: 3 |
| Symbols: RMA1 | RMA1 (Ring finger protein with Membrane Anchor 1); protein binding / ubiquitin-protein ligase/ zinc ... |
| Match: At4G03510.1 |
score: 127 |
e-value: 8e-30 |
Identity: 40.98% |
Span: 594bp (87.0%) |
Frame: 3 |
| Symbols: RMA1 | RMA1 (Ring finger protein with Membrane Anchor 1); protein binding / ubiquitin-protein ligase/ zinc ... |
| Match: At1G19310.1 |
score: 102 |
e-value: 2e-22 |
Identity: 34.48% |
Span: 591bp (86.5%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr1:6676415-6677095 REVERSE |
| Match: At4G28270.1 |
score: 102 |
e-value: 3e-22 |
Identity: 33.67% |
Span: 576bp (84.3%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr4:14007620-14008201 REVERSE |
| Match: At1G74990.1 |
score: 99.4 |
e-value: 2e-21 |
Identity: 39.85% |
Span: 399bp (58.4%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr1:28163498-28163911 REVERSE |
| Match: At3G58030.3 |
score: 98.2 |
e-value: 4e-21 |
Identity: 42.57% |
Span: 303bp (44.4%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr3:21496504-21497814 FORWARD |
| Match: At3G58030.2 |
score: 98.2 |
e-value: 4e-21 |
Identity: 42.57% |
Span: 303bp (44.4%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr3:21496504-21497814 FORWARD |
| Match: At3G58030.1 |
score: 98.2 |
e-value: 4e-21 |
Identity: 42.57% |
Span: 303bp (44.4%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr3:21496504-21497814 FORWARD |
| Match: At2G42030.1 |
score: 96.7 |
e-value: 1e-20 |
Identity: 46.3% |
Span: 324bp (47.4%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr2:17546147-17547424 REVERSE |
| Match: At2G23780.1 |
score: 93.2 |
e-value: 1e-19 |
Identity: 52.56% |
Span: 222bp (32.5%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr2:10130631-10131314 REVERSE |
| Match: At2G44410.1 |
score: 83.6 |
e-value: 1e-16 |
Identity: 29.33% |
Span: 429bp (62.8%) |
Frame: 3 |
| protein binding / zinc ion binding | chr2:18335949-18337190 FORWARD |
|
| swissprot [blastx] | Showing best 10 hits recorded |
| Match: Q99942 |
score: 88.2 |
e-value: 4e-17 |
Identity: 53.85% |
Span: 195bp (28.6%) |
Frame: 3 |
| E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens GN=RNF5 PE=1 SV=1 |
| Match: Q5M807 |
score: 87.4 |
e-value: 8e-17 |
Identity: 55.38% |
Span: 195bp (28.6%) |
Frame: 3 |
| E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus GN=Rnf5 PE=2 SV=1 |
| Match: O35445 |
score: 87.4 |
e-value: 8e-17 |
Identity: 55.38% |
Span: 195bp (28.6%) |
Frame: 3 |
| E3 ubiquitin-protein ligase RNF5 OS=Mus musculus GN=Rnf5 PE=1 SV=1 |
| Match: Q568Y3 |
score: 87 |
e-value: 1e-16 |
Identity: 48.15% |
Span: 222bp (32.5%) |
Frame: 3 |
| RING finger protein 185 OS=Rattus norvegicus GN=Rnf185 PE=2 SV=1 |
| Match: Q91YT2 |
score: 87 |
e-value: 1e-16 |
Identity: 48.15% |
Span: 222bp (32.5%) |
Frame: 3 |
| RING finger protein 185 OS=Mus musculus GN=Rnf185 PE=2 SV=1 |
| Match: Q5ZIR9 |
score: 87 |
e-value: 1e-16 |
Identity: 48.15% |
Span: 222bp (32.5%) |
Frame: 3 |
| RING finger protein 185 OS=Gallus gallus GN=RNF185 PE=2 SV=1 |
| Match: Q5RFK9 |
score: 86.7 |
e-value: 1e-16 |
Identity: 52.31% |
Span: 195bp (28.6%) |
Frame: 3 |
| RING finger protein 185 OS=Pongo abelii GN=RNF185 PE=2 SV=1 |
| Match: Q96GF1 |
score: 86.7 |
e-value: 1e-16 |
Identity: 52.31% |
Span: 195bp (28.6%) |
Frame: 3 |
| RING finger protein 185 OS=Homo sapiens GN=RNF185 PE=2 SV=1 |
| Match: Q6PC78 |
score: 85.5 |
e-value: 3e-16 |
Identity: 50.77% |
Span: 195bp (28.6%) |
Frame: 3 |
| RING finger protein 185 OS=Danio rerio GN=rnf185 PE=2 SV=1 |
| Match: Q09463 |
score: 84.7 |
e-value: 5e-16 |
Identity: 48.65% |
Span: 222bp (32.5%) |
Frame: 3 |
| RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5 PE=1 SV=1 |
|
