| genbank/nr [blastx] | Showing best 48 hits recorded |
| Match: gi|34904418|ref|NP_913556.1| |
score: 95.13 |
e-value: 8.8e-19 |
Identity: 37.74% |
Span: 432bp (63.2%) |
Frame: 2 |
| gi|34904418|ref|NP_913556.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|7339705|dbj|BAA92910... |
| Match: gi|22328051|ref|NP_201244.2| |
score: 57.38 |
e-value: 2e-07 |
Identity: 31.15% |
Span: 366bp (53.5%) |
Frame: 2 |
| HEN4 (HUA ENHANCER 4); RNA binding / nucleic acid binding [Arabidopsis thaliana] |
| Match: gi|28261403|gb|AAO37828.1| |
score: 57.38 |
e-value: 2e-07 |
Identity: 31.15% |
Span: 366bp (53.5%) |
Frame: 2 |
| HEN4 [Arabidopsis thaliana] |
| Match: gi|28261405|gb|AAO37829.1| |
score: 57.38 |
e-value: 2e-07 |
Identity: 31.15% |
Span: 366bp (53.5%) |
Frame: 2 |
| HEN4 isoform 2 [Arabidopsis thaliana] |
| Match: gi|15217969|ref|NP_175569.1| |
score: 56.22 |
e-value: 4.5e-07 |
Identity: 31.85% |
Span: 375bp (54.8%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi12321677|gb|AAG50879.1|AC025294_17 hypothetical protein [Arabi... |
| Match: gi|30696273|ref|NP_200118.3| |
score: 54.3 |
e-value: 1.7e-06 |
Identity: 43.64% |
Span: 165bp (24.1%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi17065220|gb|AAL32764.1| RNA-binding protein-like [Arabidopsis ... |
| Match: gi|8809595|dbj|BAA97146.1| |
score: 54.3 |
e-value: 1.7e-06 |
Identity: 43.64% |
Span: 165bp (24.1%) |
Frame: 2 |
| RNA-binding protein-like [Arabidopsis thaliana] |
| Match: gi|37535668|ref|NP_922136.1| |
score: 53.14 |
e-value: 3.8e-06 |
Identity: 39.06% |
Span: 192bp (28.1%) |
Frame: 2 |
| gi|37535668|ref|NP_922136.1| putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] gi|22128716|gb|AAM... |
| Match: gi|18921324|gb|AAL82529.1| |
score: 51.99 |
e-value: 8.5e-06 |
Identity: 36.84% |
Span: 222bp (32.5%) |
Frame: 2 |
| gi|18921324|gb|AAL82529.1| putative nucleic acid binding protein [Oryza sativa] |
| Match: gi|11357886|pir||T49962 |
score: 49.68 |
e-value: 4.2e-05 |
Identity: 33.71% |
Span: 255bp (37.3%) |
Frame: 2 |
| gi|11357886|pir||T49962 hypothetical protein F8M21.160 - Arabidopsis thaliana gi|7671496|emb|CAB89337.1| putative pro... |
| Match: gi|30685269|ref|NP_851040.1| |
score: 49.68 |
e-value: 4.2e-05 |
Identity: 33.71% |
Span: 255bp (37.3%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi30685276|ref|NP_197031.3| KH domain-containing protein [Arabid... |
| Match: gi|13605589|gb|AAK32788.1| |
score: 48.52 |
e-value: 9.4e-05 |
Identity: 42.03% |
Span: 207bp (30.3%) |
Frame: 2 |
| gi|13605589|gb|AAK32788.1| AT5g46190/MCL19_25 [Arabidopsis thaliana] |
| Match: gi|15237393|ref|NP_199431.1| |
score: 48.52 |
e-value: 9.4e-05 |
Identity: 42.03% |
Span: 207bp (30.3%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis t... |
| Match: gi|21553916|gb|AAM62999.1| |
score: 48.52 |
e-value: 9.4e-05 |
Identity: 42.03% |
Span: 207bp (30.3%) |
Frame: 2 |
| unknown [Arabidopsis thaliana] |
| Match: gi|15217969|ref|NP_175569.1| |
score: 46.98 |
e-value: 0.00027 |
Identity: 42.55% |
Span: 141bp (20.6%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi12321677|gb|AAG50879.1|AC025294_17 hypothetical protein [Arabi... |
| Match: gi|25518414|pir||C86275 |
score: 46.21 |
e-value: 0.00047 |
Identity: 26.56% |
Span: 336bp (49.1%) |
Frame: 2 |
| gi|25518414|pir||C86275 hypothetical protein [imported] - Arabidopsis thaliana gi|5080792|gb|AAD39302.1| Unknown prot... |
| Match: gi|15236863|ref|NP_193572.1| |
score: 45.82 |
e-value: 0.00061 |
Identity: 40% |
Span: 165bp (24.1%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-conta... |
| Match: gi|25412123|pir||E84614 |
score: 45.82 |
e-value: 0.00061 |
Identity: 25.95% |
Span: 384bp (56.1%) |
Frame: 2 |
| gi|25412123|pir||E84614 probable RNA-binding protein [imported] - Arabidopsis thaliana gi|4314357|gb|AAD15568.1| puta... |
| Match: gi|30684386|ref|NP_849406.1| |
score: 45.82 |
e-value: 0.00061 |
Identity: 40% |
Span: 165bp (24.1%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi24762211|gb|AAN64172.1| putative KH domain protein [Arabidopsi... |
| Match: gi|30681758|ref|NP_850026.1| |
score: 45.82 |
e-value: 0.00061 |
Identity: 25.95% |
Span: 384bp (56.1%) |
Frame: 2 |
| gi|30681758|ref|NP_850026.1| KH domain protein [Arabidopsis thaliana] |
| Match: gi|30683629|ref|NP_172869.2| |
score: 45.82 |
e-value: 0.00061 |
Identity: 27.17% |
Span: 240bp (35.1%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi30102666|gb|AAP21251.1| At1g14170 [Arabidopsis thaliana] >gi|1... |
| Match: gi|7486302|pir||T04533 |
score: 45.82 |
e-value: 0.00061 |
Identity: 40% |
Span: 165bp (24.1%) |
Frame: 2 |
| hypothetical protein F28J12.30 - Arabidopsis thaliana >gi2832642|emb|CAA16717.1| putative protein [Arabidopsis thalia... |
| Match: gi|37536904|ref|NP_922754.1| |
score: 45.05 |
e-value: 0.001 |
Identity: 42.59% |
Span: 162bp (23.7%) |
Frame: 2 |
| gi|37536904|ref|NP_922754.1| putative nucleic acid binding protein [Oryza sativa (japonica cultivar-group)] gi|125978... |
| Match: gi|34904418|ref|NP_913556.1| |
score: 42.36 |
e-value: 0.007 |
Identity: 33.96% |
Span: 159bp (23.2%) |
Frame: 2 |
| gi|34904418|ref|NP_913556.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|7339705|dbj|BAA92910... |
| Match: gi|32564299|ref|NP_497351.2| |
score: 41.97 |
e-value: 0.009 |
Identity: 30% |
Span: 198bp (28.9%) |
Frame: 2 |
| gi|32564299|ref|NP_497351.2| patterned Expression Site PES-4, poly(rC)-binding protein-like, similar to heterogenous ... |
| Match: gi|15229321|ref|NP_187112.1| |
score: 41.97 |
e-value: 0.009 |
Identity: 38.89% |
Span: 162bp (23.7%) |
Frame: 2 |
| FLK (flowering locus KH domain); RNA binding / nucleic acid binding [Arabidopsis thaliana] >gi6175183|gb|AAF04909.1|A... |
| Match: gi|23479512|gb|EAA16319.1| |
score: 41.2 |
e-value: 0.015 |
Identity: 28.72% |
Span: 279bp (40.8%) |
Frame: 2 |
| gi|23479512|gb|EAA16319.1| RNA-binding protein Nova-2 [Plasmodium yoelii yoelii] |
| Match: gi|23509372|ref|NP_702039.1| |
score: 40.43 |
e-value: 0.026 |
Identity: 34% |
Span: 150bp (21.9%) |
Frame: 2 |
| gi|23509372|ref|NP_702039.1| hypothetical protein [Plasmodium falciparum 3D7] gi|23497216|gb|AAN36763.1| hypothetical... |
| Match: gi|28493388|ref|NP_787549.1| |
score: 40.43 |
e-value: 0.026 |
Identity: 48.72% |
Span: 117bp (17.1%) |
Frame: 2 |
| gi|28493388|ref|NP_787549.1| polyribonucleotide nucleotidyltransferase [Tropheryma whipplei str. Twist] gi|28476429|g... |
| Match: gi|17507467|ref|NP_493503.1| |
score: 40.43 |
e-value: 0.026 |
Identity: 33.78% |
Span: 222bp (32.5%) |
Frame: 2 |
| gi|17507467|ref|NP_493503.1| aminopeptidase (1O931) [Caenorhabditis elegans] gi|7503797|pir||T22406 hypothetical prot... |
| Match: gi|28572501|ref|NP_789281.1| |
score: 40.43 |
e-value: 0.026 |
Identity: 48.72% |
Span: 117bp (17.1%) |
Frame: 2 |
| gi|28572501|ref|NP_789281.1| mRNA processing exonuclease [Tropheryma whipplei TW08/27] gi|28410633|emb|CAD67019.1| mR... |
| Match: gi|33604078|gb|AAH56323.1| |
score: 40.05 |
e-value: 0.033 |
Identity: 38.71% |
Span: 183bp (26.8%) |
Frame: 2 |
| gi|33604078|gb|AAH56323.1| Unknown (protein for MGC:65870) [Danio rerio] |
| Match: gi|21753335|dbj|BAC04327.1| |
score: 39.66 |
e-value: 0.044 |
Identity: 38.71% |
Span: 183bp (26.8%) |
Frame: 2 |
| gi|21753335|dbj|BAC04327.1| unnamed protein product [Homo sapiens] |
| Match: gi|10092617|ref|NP_065389.1| |
score: 39.66 |
e-value: 0.044 |
Identity: 38.71% |
Span: 183bp (26.8%) |
Frame: 2 |
| gi|10092617|ref|NP_065389.1| poly(rC) binding protein 3; poly(rC)-binding protein 3; poly (rC)-binding protein 3 [Hom... |
| Match: gi|26330216|dbj|BAC28838.1| |
score: 39.66 |
e-value: 0.044 |
Identity: 38.71% |
Span: 183bp (26.8%) |
Frame: 2 |
| gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus] |
| Match: gi|27503479|gb|AAH42440.1| |
score: 39.66 |
e-value: 0.044 |
Identity: 38.71% |
Span: 183bp (26.8%) |
Frame: 2 |
| gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus] |
| Match: gi|26348076|dbj|BAC37686.1| |
score: 39.66 |
e-value: 0.044 |
Identity: 38.71% |
Span: 183bp (26.8%) |
Frame: 2 |
| gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus] |
| Match: gi|15082311|gb|AAH12061.1| |
score: 39.66 |
e-value: 0.044 |
Identity: 38.71% |
Span: 183bp (26.8%) |
Frame: 2 |
| gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens] |
| Match: gi|27882469|gb|AAH44711.1| |
score: 39.28 |
e-value: 0.057 |
Identity: 32% |
Span: 150bp (21.9%) |
Frame: 2 |
| gi|27882469|gb|AAH44711.1| Hnrpk-prov protein [Xenopus laevis] |
| Match: gi|28279638|gb|AAH45508.1| |
score: 39.28 |
e-value: 0.057 |
Identity: 41.82% |
Span: 162bp (23.7%) |
Frame: 2 |
| gi|28279638|gb|AAH45508.1| Similar to poly(rC) binding protein 2 [Danio rerio] gi|37681899|gb|AAQ97827.1| poly(rC) bi... |
| Match: gi|10947014|ref|NP_067543.1| |
score: 39.28 |
e-value: 0.057 |
Identity: 40% |
Span: 162bp (23.7%) |
Frame: 2 |
| gi|10947014|ref|NP_067543.1| poly(rC) binding protein 3; poly(rC)-binding protein 3 [Mus musculus] gi|12230428|sp|P57... |
| Match: gi|6319709|ref|NP_009792.1| |
score: 39.28 |
e-value: 0.057 |
Identity: 31.37% |
Span: 153bp (22.4%) |
Frame: 2 |
| gi|6319709|ref|NP_009792.1| Overexpression confers resistance to the antimalarial drug mefloquine; Pbp2p [Saccharomyc... |
| Match: gi|31981202|ref|NP_067542.2| |
score: 38.89 |
e-value: 0.075 |
Identity: 34.21% |
Span: 225bp (32.9%) |
Frame: 2 |
| gi|31981202|ref|NP_067542.2| poly(rC) binding protein 4; poly(rC)-binding protein 4 [Mus musculus] gi|26346528|dbj|BA... |
| Match: gi|23612133|ref|NP_703713.1| |
score: 38.89 |
e-value: 0.075 |
Identity: 26.79% |
Span: 291bp (42.5%) |
Frame: 2 |
| gi|23612133|ref|NP_703713.1| RNA binding protein, putative [Plasmodium falciparum 3D7] gi|23498374|emb|CAD50325.1| RN... |
| Match: gi|6681135|ref|NP_031855.1| |
score: 38.89 |
e-value: 0.075 |
Identity: 27.85% |
Span: 237bp (34.6%) |
Frame: 2 |
| gi|6681135|ref|NP_031855.1| Fas death domain-associated protein [Mus musculus] gi|24636788|sp|O35613|DAXX_MOUSE Death... |
| Match: gi|2706495|emb|CAA65843.1| |
score: 38.51 |
e-value: 0.097 |
Identity: 43.18% |
Span: 132bp (19.3%) |
Frame: -1 |
| gi|2706495|emb|CAA65843.1| CBEL protein, formerly GP34 [Phytophthora parasitica] |
| Match: gi|17737727|ref|NP_524208.1| |
score: 38.51 |
e-value: 0.097 |
Identity: 25.37% |
Span: 189bp (27.6%) |
Frame: 2 |
| gi|17737727|ref|NP_524208.1| mushroom-body expressed CG7437-PA [Drosophila melanogaster] gi|24668436|ref|NP_730700.1|... |
| Match: gi|16648354|gb|AAL25442.1| |
score: 38.51 |
e-value: 0.097 |
Identity: 25.37% |
Span: 189bp (27.6%) |
Frame: 2 |
| gi|16648354|gb|AAL25442.1| LD32520p [Drosophila melanogaster] |
|
| arabidopsis/peptide [blastx] | Showing best 21 hits recorded |
| Match: At5g64390.1 |
score: 57.38 |
e-value: 7.3e-09 |
Identity: 31.15% |
Span: 366bp (53.5%) |
Frame: 2 |
| At5g64390.1 68412.m07317 KH domain protein contains similarity to RNA-binding protein |
| Match: At1g51580.1 |
score: 56.22 |
e-value: 1.6e-08 |
Identity: 31.85% |
Span: 375bp (54.8%) |
Frame: 2 |
| At1g51580.1 68408.m05330 KH domain protein |
| Match: At5g53060.1 |
score: 54.3 |
e-value: 6.2e-08 |
Identity: 43.64% |
Span: 165bp (24.1%) |
Frame: 2 |
| At5g53060.1 68412.m05959 KH domain protein |
| Match: At5g15270.1 |
score: 49.68 |
e-value: 1.5e-06 |
Identity: 33.71% |
Span: 255bp (37.3%) |
Frame: 2 |
| At5g15270.1 68412.m07802 KH domain protein various predicted proteins, Arabidopsis thaliana and Oryza sativa |
| Match: At5g15270.2 |
score: 49.68 |
e-value: 1.5e-06 |
Identity: 33.71% |
Span: 255bp (37.3%) |
Frame: 2 |
| At5g15270.2 68412.m07803 KH domain protein various predicted proteins, Arabidopsis thaliana and Oryza sativa |
| Match: At5g46190.1 |
score: 48.52 |
e-value: 3.4e-06 |
Identity: 42.03% |
Span: 207bp (30.3%) |
Frame: 2 |
| At5g46190.1 68412.m05122 KH domain protein strong similarity to unknown protein (pir||T04533) |
| Match: At1g51580.1 |
score: 46.98 |
e-value: 9.9e-06 |
Identity: 42.55% |
Span: 141bp (20.6%) |
Frame: 2 |
| At1g51580.1 68408.m05330 KH domain protein |
| Match: At4g18375.1 |
score: 45.82 |
e-value: 2.2e-05 |
Identity: 40% |
Span: 165bp (24.1%) |
Frame: 2 |
| At4g18375.1 68411.m02487 KH domain protein contains similarity to RNA-binding KH-domains PF:00013 |
| Match: At1g14170.1 |
score: 45.82 |
e-value: 2.2e-05 |
Identity: 27.17% |
Span: 240bp (35.1%) |
Frame: 2 |
| At1g14170.1 68408.m01516 KH domain protein location of EST 219C14T7 , gb|N38506 |
| Match: At4g18375.2 |
score: 45.82 |
e-value: 2.2e-05 |
Identity: 40% |
Span: 165bp (24.1%) |
Frame: 2 |
| At4g18375.2 68411.m02488 KH domain protein contains similarity to RNA-binding KH-domains PF:00013 |
| Match: At2g22600.1 |
score: 45.82 |
e-value: 2.2e-05 |
Identity: 25.95% |
Span: 384bp (56.1%) |
Frame: 2 |
| At2g22600.1 68409.m02429 KH domain protein |
| Match: At3g04610.1 |
score: 41.97 |
e-value: 0.00032 |
Identity: 38.89% |
Span: 162bp (23.7%) |
Frame: 2 |
| At3g04610.1 68410.m00455 KH domain protein similar putative nucleic acid binding protein GB:CAB39665 [Arabidopsis tha... |
| Match: At4g26000.1 |
score: 38.12 |
e-value: 0.005 |
Identity: 35.19% |
Span: 162bp (23.7%) |
Frame: 2 |
| At4g26000.1 68411.m03409 KH domain protein single-stranded nucleic acid-binding protein CBP - mouse, PIR2:S78515 |
| Match: At5g53060.1 |
score: 38.12 |
e-value: 0.005 |
Identity: 37.04% |
Span: 162bp (23.7%) |
Frame: 2 |
| At5g53060.1 68412.m05959 KH domain protein |
| Match: At1g14170.1 |
score: 37.74 |
e-value: 0.006 |
Identity: 38.89% |
Span: 162bp (23.7%) |
Frame: 2 |
| At1g14170.1 68408.m01516 KH domain protein location of EST 219C14T7 , gb|N38506 |
| Match: At5g64390.1 |
score: 37.74 |
e-value: 0.006 |
Identity: 28.75% |
Span: 234bp (34.2%) |
Frame: 2 |
| At5g64390.1 68412.m07317 KH domain protein contains similarity to RNA-binding protein |
| Match: At2g22795.1 |
score: 37.74 |
e-value: 0.006 |
Identity: 44.23% |
Span: 156bp (22.8%) |
Frame: 2 |
| At2g22795.1 68409.m02450 expressed protein |
| Match: At2g03110.1 |
score: 36.19 |
e-value: 0.017 |
Identity: 36% |
Span: 147bp (21.5%) |
Frame: 2 |
| At2g03110.1 68409.m00230 KH domain protein |
| Match: At5g27650.1 |
score: 35.81 |
e-value: 0.023 |
Identity: 26.36% |
Span: 330bp (48.2%) |
Frame: 2 |
| At5g27650.1 68412.m03019 PWWP domain protein hypothetical protein F22F7.12 - Arabidopsis thaliana, EMBL:AC009606 |
| Match: At5g64390.1 |
score: 35.42 |
e-value: 0.03 |
Identity: 30% |
Span: 150bp (21.9%) |
Frame: 2 |
| At5g64390.1 68412.m07317 KH domain protein contains similarity to RNA-binding protein |
| Match: At5g46190.1 |
score: 34.65 |
e-value: 0.051 |
Identity: 26.83% |
Span: 243bp (35.5%) |
Frame: 2 |
| At5g46190.1 68412.m05122 KH domain protein strong similarity to unknown protein (pir||T04533) |
|
