| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|37535452|ref|NP_922028.1| |
score: 158.3 |
e-value: 5.5e-48 |
Identity: 73.12% |
Span: 279bp (40.6%) |
Frame: 3 |
| gi|37535452|ref|NP_922028.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|22094359|gb|AAM91886.1|... |
| Match: gi|38343998|emb|CAD40363.2| |
score: 157.1 |
e-value: 9.4e-48 |
Identity: 65.42% |
Span: 321bp (46.7%) |
Frame: 3 |
| gi|38343998|emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37533254|ref|NP_920929.1| |
score: 155.2 |
e-value: 3.9e-49 |
Identity: 64.49% |
Span: 321bp (46.7%) |
Frame: 3 |
| gi|37533254|ref|NP_920929.1| putative retroelement [Oryza sativa (japonica cultivar-group)] gi|19920130|gb|AAM08562.1... |
| Match: gi|38344889|emb|CAD41912.2| |
score: 150.2 |
e-value: 6e-47 |
Identity: 64.49% |
Span: 321bp (46.7%) |
Frame: 3 |
| OSJNBa0033G05.13 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37530366|ref|NP_919485.1| |
score: 144.4 |
e-value: 8.3e-43 |
Identity: 64.65% |
Span: 297bp (43.2%) |
Frame: 3 |
| gi|37530366|ref|NP_919485.1| putative pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|18542925|gb|AAL7575... |
| Match: gi|14029020|gb|AAK52561.1| |
score: 142.9 |
e-value: 1.1e-42 |
Identity: 64.65% |
Span: 297bp (43.2%) |
Frame: 3 |
| gi|14029020|gb|AAK52561.1| Putative retroelement pol polyprotein [Oryza sativa] |
| Match: gi|38346859|emb|CAE02229.2| |
score: 135.6 |
e-value: 4.7e-40 |
Identity: 61.62% |
Span: 297bp (43.2%) |
Frame: 3 |
| gi|38346859|emb|CAE02229.2| OSJNBb0015C06.7 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|99729|pir||S23314 |
score: 109.8 |
e-value: 5.9e-34 |
Identity: 52.69% |
Span: 279bp (40.6%) |
Frame: 3 |
| gi|99729|pir||S23314 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2 (strain Kashmir) (fragment) ... |
| Match: gi|8777297|dbj|BAA96887.1| |
score: 108.2 |
e-value: 1.1e-32 |
Identity: 50.53% |
Span: 285bp (41.4%) |
Frame: 3 |
| gi|8777297|dbj|BAA96887.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|15234421|ref|NP_193867.1| |
score: 107.5 |
e-value: 6.2e-33 |
Identity: 47.87% |
Span: 282bp (41.0%) |
Frame: 3 |
| gi|15234421|ref|NP_193867.1| transposable element -related [Arabidopsis thaliana] gi|7444415|pir||T05178 hypothetical... |
| Match: gi|99721|pir||S05465 |
score: 106.3 |
e-value: 1.1e-32 |
Identity: 50.54% |
Span: 279bp (40.6%) |
Frame: 3 |
| gi|99721|pir||S05465 retrovirus-related polyprotein - Arabidopsis thaliana retrotransposon Ta1-3 gi|16534|emb|CAA3165... |
| Match: gi|99719|pir||S23319 |
score: 105.9 |
e-value: 8.1e-33 |
Identity: 50.54% |
Span: 279bp (40.6%) |
Frame: 3 |
| gi|99719|pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2 (strain Landsberg) (fragment... |
| Match: gi|15225746|ref|NP_178761.1| |
score: 105.1 |
e-value: 1.8e-32 |
Identity: 45.45% |
Span: 297bp (43.2%) |
Frame: 3 |
| gi|15225746|ref|NP_178761.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301696|pir||F84486 pro... |
| Match: gi|22328529|ref|NP_680670.1| |
score: 104.8 |
e-value: 1.6e-30 |
Identity: 49.49% |
Span: 297bp (43.2%) |
Frame: 3 |
| gi|22328529|ref|NP_680670.1| retroelement pol polyprotein -related [Arabidopsis thaliana] |
| Match: gi|15225537|ref|NP_179010.1| |
score: 104 |
e-value: 3.5e-30 |
Identity: 50.51% |
Span: 297bp (43.2%) |
Frame: 3 |
| gi|15225537|ref|NP_179010.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301697|pir||B84512 pro... |
| Match: gi|13699782|gb|AAK38381.1| |
score: 104 |
e-value: 1.5e-31 |
Identity: 49.46% |
Span: 279bp (40.6%) |
Frame: 3 |
| gi|13699782|gb|AAK38381.1| polyprotein, putative [Arabidopsis thaliana] |
| Match: gi|15239208|ref|NP_198431.1| |
score: 103.6 |
e-value: 1.1e-31 |
Identity: 48.48% |
Span: 297bp (43.2%) |
Frame: 3 |
| gi|15239208|ref|NP_198431.1| copia-related retrotransposable element [Arabidopsis thaliana] gi|10176701|dbj|BAB09923.... |
| Match: gi|15221311|ref|NP_174900.1| |
score: 103.2 |
e-value: 4.2e-31 |
Identity: 47.47% |
Span: 297bp (43.2%) |
Frame: 3 |
| gi|15221311|ref|NP_174900.1| polyprotein -related [Arabidopsis thaliana] gi|25301707|pir||E86490 hypothetical protein... |
| Match: gi|15226597|ref|NP_179172.1| |
score: 102.4 |
e-value: 1.4e-28 |
Identity: 47.47% |
Span: 297bp (43.2%) |
Frame: 3 |
| gi|15226597|ref|NP_179172.1| copia-related retroelement pol polyprotein [Arabidopsis thaliana] gi|25301680|pir||C8453... |
| Match: gi|130582|sp|P10978|POLX_TOBAC |
score: 101.3 |
e-value: 5.3e-28 |
Identity: 49.48% |
Span: 282bp (41.0%) |
Frame: 3 |
| gi|130582|sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Contains: Protease ; Reve... |
| Match: gi|15226548|ref|NP_179741.1| |
score: 100.9 |
e-value: 5.5e-31 |
Identity: 44.44% |
Span: 297bp (43.2%) |
Frame: 3 |
| gi|15226548|ref|NP_179741.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301702|pir||E84601 pro... |
| Match: gi|15224855|ref|NP_179574.1| |
score: 100.9 |
e-value: 2.2e-29 |
Identity: 46.46% |
Span: 297bp (43.2%) |
Frame: 3 |
| gi|15224855|ref|NP_179574.1| copia-related retroelement pol polyprotein [Arabidopsis thaliana] gi|25411934|pir||G8458... |
| Match: gi|15220180|ref|NP_175169.1| |
score: 99.37 |
e-value: 8.3e-29 |
Identity: 49.46% |
Span: 279bp (40.6%) |
Frame: 3 |
| gi|15220180|ref|NP_175169.1| polyprotein -related [Arabidopsis thaliana] |
| Match: gi|13540823|gb|AAK29467.1| |
score: 97.06 |
e-value: 9.6e-27 |
Identity: 47.42% |
Span: 282bp (41.0%) |
Frame: 3 |
| polyprotein-like [Solanum chilense] |
| Match: gi|15235118|ref|NP_192784.1| |
score: 92.05 |
e-value: 2e-27 |
Identity: 44% |
Span: 300bp (43.6%) |
Frame: 3 |
| gi|15235118|ref|NP_192784.1| retrotransposon -related [Arabidopsis thaliana] gi|7444416|pir||T04181 hypothetical prot... |
| Match: gi|18071369|gb|AAL58228.1| |
score: 91.66 |
e-value: 2.8e-22 |
Identity: 42.57% |
Span: 294bp (42.7%) |
Frame: 3 |
| gi|18071369|gb|AAL58228.1| putative gag-pol polyprotein [Oryza sativa] |
| Match: gi|15230716|ref|NP_190138.1| |
score: 90.89 |
e-value: 1.2e-27 |
Identity: 42.42% |
Span: 297bp (43.2%) |
Frame: 3 |
| gi|15230716|ref|NP_190138.1| copia-related polyprotein [Arabidopsis thaliana] gi|11278366|pir||T47492 copia-like poly... |
| Match: gi|15221940|ref|NP_175303.1| |
score: 90.12 |
e-value: 1.2e-23 |
Identity: 44.79% |
Span: 279bp (40.6%) |
Frame: 3 |
| gi|15221940|ref|NP_175303.1| copia-type polyprotein -related [Arabidopsis thaliana] gi|12597806|gb|AAG60117.1| copia-... |
| Match: gi|31249765|gb|AAP46257.1| |
score: 90.12 |
e-value: 7.9e-22 |
Identity: 41.58% |
Span: 294bp (42.7%) |
Frame: 3 |
| putative polyprotein [Oryza sativa Japonica Group] >gi108711922|gb|ABF99717.1| retrotransposon protein, putative, unc... |
| Match: gi|37530416|ref|NP_919510.1| |
score: 89.74 |
e-value: 1e-21 |
Identity: 42.57% |
Span: 294bp (42.7%) |
Frame: 3 |
| gi|37530416|ref|NP_919510.1| putative copia-type polyprotein [Oryza sativa (japonica cultivar-group)] gi|18542917|gb|... |
| Match: gi|15220332|ref|NP_172593.1| |
score: 89.35 |
e-value: 2e-23 |
Identity: 44.79% |
Span: 279bp (40.6%) |
Frame: 3 |
| gi|15220332|ref|NP_172593.1| copia-type polyprotein [Arabidopsis thaliana] gi|25301681|pir||F86246 hypothetical prote... |
| Match: gi|22326764|ref|NP_680163.1| |
score: 89.35 |
e-value: 2e-23 |
Identity: 44.79% |
Span: 279bp (40.6%) |
Frame: 3 |
| gi|22326764|ref|NP_680163.1| copia-type polyprotein -related [Arabidopsis thaliana] |
| Match: gi|15233083|ref|NP_191692.1| |
score: 89.35 |
e-value: 2e-23 |
Identity: 44.79% |
Span: 279bp (40.6%) |
Frame: 3 |
| gi|15233083|ref|NP_191692.1| copia-type polyprotein [Arabidopsis thaliana] gi|11278364|pir||T47925 copia-type polypro... |
| Match: gi|15217880|ref|NP_176110.1| |
score: 89.35 |
e-value: 2e-23 |
Identity: 44.79% |
Span: 279bp (40.6%) |
Frame: 3 |
| gi|15217880|ref|NP_176110.1| copia-type polyprotein -related [Arabidopsis thaliana] gi|25301687|pir||F96614 probable ... |
| Match: gi|15219148|ref|NP_173613.1| |
score: 89.35 |
e-value: 2e-23 |
Identity: 44.79% |
Span: 279bp (40.6%) |
Frame: 3 |
| gi|15219148|ref|NP_173613.1| polyprotein -related [Arabidopsis thaliana] |
| Match: gi|6552735|gb|AAF16534.1| |
score: 89.35 |
e-value: 2e-23 |
Identity: 44.79% |
Span: 279bp (40.6%) |
Frame: 3 |
| gi|6552735|gb|AAF16534.1| T26F17.17 [Arabidopsis thaliana] |
| Match: gi|15231741|ref|NP_191531.1| |
score: 89.35 |
e-value: 2e-23 |
Identity: 44.79% |
Span: 279bp (40.6%) |
Frame: 3 |
| gi|15231741|ref|NP_191531.1| copia-type reverse transcriptase-related protein [Arabidopsis thaliana] gi|11278363|pir|... |
| Match: gi|1769898|emb|CAA69272.1| |
score: 89.35 |
e-value: 2e-23 |
Identity: 44.79% |
Span: 279bp (40.6%) |
Frame: 3 |
| gi|1769898|emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana] |
| Match: gi|7444414|pir||T02206 |
score: 87.81 |
e-value: 2.6e-23 |
Identity: 40.21% |
Span: 282bp (41.0%) |
Frame: 3 |
| gi|7444414|pir||T02206 hypothetical protein - common tobacco retrotransposon Tto1 gi|1167523|dbj|BAA11674.1| ORF(AA 1... |
| Match: gi|38345684|emb|CAE04330.2| |
score: 85.11 |
e-value: 2.3e-21 |
Identity: 41.84% |
Span: 282bp (41.0%) |
Frame: 3 |
| gi|38345684|emb|CAE04330.2| OSJNBb0016D16.21 [Oryza sativa (japonica cultivar-group)] gi|38346705|emb|CAE04855.2| OSJ... |
| Match: gi|38344019|emb|CAE03125.2| |
score: 85.11 |
e-value: 2.3e-21 |
Identity: 41.84% |
Span: 282bp (41.0%) |
Frame: 3 |
| gi|38344019|emb|CAE03125.2| OJ000114_01.6 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37536916|ref|NP_922760.1| |
score: 85.11 |
e-value: 2.3e-21 |
Identity: 41.84% |
Span: 282bp (41.0%) |
Frame: 3 |
| gi|37536916|ref|NP_922760.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|12597892|gb|AAG... |
| Match: gi|22758275|gb|AAN05503.1| |
score: 85.11 |
e-value: 2.3e-21 |
Identity: 41.84% |
Span: 282bp (41.0%) |
Frame: 3 |
| gi|22758275|gb|AAN05503.1| Putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|391657|dbj|BAA01703.1| |
score: 82.8 |
e-value: 7.4e-23 |
Identity: 42.72% |
Span: 297bp (43.2%) |
Frame: 3 |
| gi|391657|dbj|BAA01703.1| ORF [Drosophila simulans] |
| Match: gi|224534|prf||1107279B |
score: 82.8 |
e-value: 7.4e-23 |
Identity: 42.72% |
Span: 297bp (43.2%) |
Frame: 3 |
| gi|224534|prf||1107279B ORF g |
| Match: gi|19309877|emb|CAD27357.1| |
score: 82.8 |
e-value: 7.4e-23 |
Identity: 42.72% |
Span: 297bp (43.2%) |
Frame: 3 |
| gi|19309877|emb|CAD27357.1| hypothetical protein [Drosophila melanogaster] |
| Match: gi|4377464|emb|CAA26447.1| |
score: 82.8 |
e-value: 7.4e-23 |
Identity: 42.72% |
Span: 297bp (43.2%) |
Frame: 3 |
| gi|4377464|emb|CAA26447.1| unnamed protein product [Drosophila melanogaster] |
| Match: gi|13124684|sp|P04146|COPI_DROME |
score: 82.8 |
e-value: 7.4e-23 |
Identity: 42.72% |
Span: 297bp (43.2%) |
Frame: 3 |
| gi|13124684|sp|P04146|COPI_DROME Copia protein [Contains: Copia VLP protein; Copia protease ] gi|74599|pir||OFFFCP co... |
| Match: gi|15233445|ref|NP_192337.1| |
score: 80.49 |
e-value: 1.3e-22 |
Identity: 41.18% |
Span: 255bp (37.1%) |
Frame: 3 |
| gi|15233445|ref|NP_192337.1| transposon protein -related [Arabidopsis thaliana] gi|7487467|pir||T01811 hypothetical p... |
| Match: gi|15233484|ref|NP_192347.1| |
score: 76.64 |
e-value: 4.7e-22 |
Identity: 41.11% |
Span: 270bp (39.2%) |
Frame: 3 |
| gi|15233484|ref|NP_192347.1| polyprotein -related [Arabidopsis thaliana] gi|25407267|pir||D85055 probable polyprotein... |
| Match: gi|37533254|ref|NP_920929.1| |
score: 62.39 |
e-value: 3.9e-49 |
Identity: 77.14% |
Span: 105bp (15.3%) |
Frame: 2 |
| gi|37533254|ref|NP_920929.1| putative retroelement [Oryza sativa (japonica cultivar-group)] gi|19920130|gb|AAM08562.1... |
| Match: gi|38344889|emb|CAD41912.2| |
score: 60.08 |
e-value: 6e-47 |
Identity: 74.29% |
Span: 105bp (15.3%) |
Frame: 2 |
| OSJNBa0033G05.13 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|99719|pir||S23319 |
score: 57 |
e-value: 8.1e-33 |
Identity: 73.53% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|99719|pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2 (strain Landsberg) (fragment... |
| Match: gi|99729|pir||S23314 |
score: 57 |
e-value: 5.9e-34 |
Identity: 73.53% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|99729|pir||S23314 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2 (strain Kashmir) (fragment) ... |
| Match: gi|15225746|ref|NP_178761.1| |
score: 56.61 |
e-value: 1.8e-32 |
Identity: 74.29% |
Span: 105bp (15.3%) |
Frame: 2 |
| gi|15225746|ref|NP_178761.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301696|pir||F84486 pro... |
| Match: gi|99721|pir||S05465 |
score: 56.22 |
e-value: 1.1e-32 |
Identity: 73.53% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|99721|pir||S05465 retrovirus-related polyprotein - Arabidopsis thaliana retrotransposon Ta1-3 gi|16534|emb|CAA3165... |
| Match: gi|15226548|ref|NP_179741.1| |
score: 55.84 |
e-value: 5.5e-31 |
Identity: 71.43% |
Span: 105bp (15.3%) |
Frame: 2 |
| gi|15226548|ref|NP_179741.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301702|pir||E84601 pro... |
| Match: gi|15234421|ref|NP_193867.1| |
score: 55.84 |
e-value: 6.2e-33 |
Identity: 70.59% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|15234421|ref|NP_193867.1| transposable element -related [Arabidopsis thaliana] gi|7444415|pir||T05178 hypothetical... |
| Match: gi|38343998|emb|CAD40363.2| |
score: 55.84 |
e-value: 9.4e-48 |
Identity: 78.79% |
Span: 96bp (14.0%) |
Frame: 2 |
| gi|38343998|emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37535452|ref|NP_922028.1| |
score: 55.45 |
e-value: 5.5e-48 |
Identity: 68.57% |
Span: 105bp (15.3%) |
Frame: 2 |
| gi|37535452|ref|NP_922028.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|22094359|gb|AAM91886.1|... |
| Match: gi|15239208|ref|NP_198431.1| |
score: 55.45 |
e-value: 1.1e-31 |
Identity: 73.53% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|15239208|ref|NP_198431.1| copia-related retrotransposable element [Arabidopsis thaliana] gi|10176701|dbj|BAB09923.... |
| Match: gi|15230716|ref|NP_190138.1| |
score: 54.68 |
e-value: 1.2e-27 |
Identity: 71.43% |
Span: 105bp (15.3%) |
Frame: 2 |
| gi|15230716|ref|NP_190138.1| copia-related polyprotein [Arabidopsis thaliana] gi|11278366|pir||T47492 copia-like poly... |
| Match: gi|13699782|gb|AAK38381.1| |
score: 54.68 |
e-value: 1.5e-31 |
Identity: 67.65% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|13699782|gb|AAK38381.1| polyprotein, putative [Arabidopsis thaliana] |
| Match: gi|8777297|dbj|BAA96887.1| |
score: 54.3 |
e-value: 1.1e-32 |
Identity: 67.65% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|8777297|dbj|BAA96887.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|15221311|ref|NP_174900.1| |
score: 53.91 |
e-value: 4.2e-31 |
Identity: 67.65% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|15221311|ref|NP_174900.1| polyprotein -related [Arabidopsis thaliana] gi|25301707|pir||E86490 hypothetical protein... |
| Match: gi|14029020|gb|AAK52561.1| |
score: 53.14 |
e-value: 1.1e-42 |
Identity: 75% |
Span: 96bp (14.0%) |
Frame: 2 |
| gi|14029020|gb|AAK52561.1| Putative retroelement pol polyprotein [Oryza sativa] |
| Match: gi|15235118|ref|NP_192784.1| |
score: 52.76 |
e-value: 2e-27 |
Identity: 71.43% |
Span: 105bp (15.3%) |
Frame: 2 |
| gi|15235118|ref|NP_192784.1| retrotransposon -related [Arabidopsis thaliana] gi|7444416|pir||T04181 hypothetical prot... |
| Match: gi|37530366|ref|NP_919485.1| |
score: 51.99 |
e-value: 8.3e-43 |
Identity: 71.88% |
Span: 96bp (14.0%) |
Frame: 2 |
| gi|37530366|ref|NP_919485.1| putative pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|18542925|gb|AAL7575... |
| Match: gi|38346859|emb|CAE02229.2| |
score: 51.6 |
e-value: 4.7e-40 |
Identity: 75% |
Span: 96bp (14.0%) |
Frame: 2 |
| gi|38346859|emb|CAE02229.2| OSJNBb0015C06.7 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15224855|ref|NP_179574.1| |
score: 50.45 |
e-value: 2.2e-29 |
Identity: 67.65% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|15224855|ref|NP_179574.1| copia-related retroelement pol polyprotein [Arabidopsis thaliana] gi|25411934|pir||G8458... |
| Match: gi|22328529|ref|NP_680670.1| |
score: 50.45 |
e-value: 1.6e-30 |
Identity: 67.65% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|22328529|ref|NP_680670.1| retroelement pol polyprotein -related [Arabidopsis thaliana] |
| Match: gi|15225537|ref|NP_179010.1| |
score: 50.06 |
e-value: 3.5e-30 |
Identity: 61.76% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|15225537|ref|NP_179010.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301697|pir||B84512 pro... |
| Match: gi|15220180|ref|NP_175169.1| |
score: 50.06 |
e-value: 8.3e-29 |
Identity: 61.76% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|15220180|ref|NP_175169.1| polyprotein -related [Arabidopsis thaliana] |
| Match: gi|15233484|ref|NP_192347.1| |
score: 50.06 |
e-value: 4.7e-22 |
Identity: 65.71% |
Span: 105bp (15.3%) |
Frame: 2 |
| gi|15233484|ref|NP_192347.1| polyprotein -related [Arabidopsis thaliana] gi|25407267|pir||D85055 probable polyprotein... |
| Match: gi|15233445|ref|NP_192337.1| |
score: 48.14 |
e-value: 1.3e-22 |
Identity: 84.62% |
Span: 78bp (11.3%) |
Frame: 2 |
| gi|15233445|ref|NP_192337.1| transposon protein -related [Arabidopsis thaliana] gi|7487467|pir||T01811 hypothetical p... |
| Match: gi|224534|prf||1107279B |
score: 46.59 |
e-value: 7.4e-23 |
Identity: 64.71% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|224534|prf||1107279B ORF g |
| Match: gi|13124684|sp|P04146|COPI_DROME |
score: 46.59 |
e-value: 7.4e-23 |
Identity: 64.71% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|13124684|sp|P04146|COPI_DROME Copia protein [Contains: Copia VLP protein; Copia protease ] gi|74599|pir||OFFFCP co... |
| Match: gi|19309877|emb|CAD27357.1| |
score: 46.59 |
e-value: 7.4e-23 |
Identity: 64.71% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|19309877|emb|CAD27357.1| hypothetical protein [Drosophila melanogaster] |
| Match: gi|4377464|emb|CAA26447.1| |
score: 46.59 |
e-value: 7.4e-23 |
Identity: 64.71% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|4377464|emb|CAA26447.1| unnamed protein product [Drosophila melanogaster] |
| Match: gi|391657|dbj|BAA01703.1| |
score: 46.59 |
e-value: 7.4e-23 |
Identity: 64.71% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|391657|dbj|BAA01703.1| ORF [Drosophila simulans] |
| Match: gi|15226597|ref|NP_179172.1| |
score: 46.21 |
e-value: 1.4e-28 |
Identity: 58.82% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|15226597|ref|NP_179172.1| copia-related retroelement pol polyprotein [Arabidopsis thaliana] gi|25301680|pir||C8453... |
| Match: gi|130582|sp|P10978|POLX_TOBAC |
score: 45.44 |
e-value: 5.3e-28 |
Identity: 66.67% |
Span: 99bp (14.4%) |
Frame: 2 |
| gi|130582|sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Contains: Protease ; Reve... |
| Match: gi|13540823|gb|AAK29467.1| |
score: 45.44 |
e-value: 9.6e-27 |
Identity: 66.67% |
Span: 99bp (14.4%) |
Frame: 2 |
| polyprotein-like [Solanum chilense] |
| Match: gi|7444414|pir||T02206 |
score: 43.13 |
e-value: 2.6e-23 |
Identity: 58.62% |
Span: 87bp (12.6%) |
Frame: 2 |
| gi|7444414|pir||T02206 hypothetical protein - common tobacco retrotransposon Tto1 gi|1167523|dbj|BAA11674.1| ORF(AA 1... |
| Match: gi|1769898|emb|CAA69272.1| |
score: 41.97 |
e-value: 2e-23 |
Identity: 55.88% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|1769898|emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana] |
| Match: gi|15231741|ref|NP_191531.1| |
score: 41.97 |
e-value: 2e-23 |
Identity: 55.88% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|15231741|ref|NP_191531.1| copia-type reverse transcriptase-related protein [Arabidopsis thaliana] gi|11278363|pir|... |
| Match: gi|6552735|gb|AAF16534.1| |
score: 41.97 |
e-value: 2e-23 |
Identity: 55.88% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|6552735|gb|AAF16534.1| T26F17.17 [Arabidopsis thaliana] |
| Match: gi|15219148|ref|NP_173613.1| |
score: 41.97 |
e-value: 2e-23 |
Identity: 55.88% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|15219148|ref|NP_173613.1| polyprotein -related [Arabidopsis thaliana] |
| Match: gi|15217880|ref|NP_176110.1| |
score: 41.97 |
e-value: 2e-23 |
Identity: 55.88% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|15217880|ref|NP_176110.1| copia-type polyprotein -related [Arabidopsis thaliana] gi|25301687|pir||F96614 probable ... |
| Match: gi|22326764|ref|NP_680163.1| |
score: 41.97 |
e-value: 2e-23 |
Identity: 55.88% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|22326764|ref|NP_680163.1| copia-type polyprotein -related [Arabidopsis thaliana] |
| Match: gi|15220332|ref|NP_172593.1| |
score: 41.97 |
e-value: 2e-23 |
Identity: 55.88% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|15220332|ref|NP_172593.1| copia-type polyprotein [Arabidopsis thaliana] gi|25301681|pir||F86246 hypothetical prote... |
| Match: gi|15233083|ref|NP_191692.1| |
score: 41.97 |
e-value: 2e-23 |
Identity: 55.88% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|15233083|ref|NP_191692.1| copia-type polyprotein [Arabidopsis thaliana] gi|11278364|pir||T47925 copia-type polypro... |
| Match: gi|15221940|ref|NP_175303.1| |
score: 41.97 |
e-value: 1.2e-23 |
Identity: 55.88% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|15221940|ref|NP_175303.1| copia-type polyprotein -related [Arabidopsis thaliana] gi|12597806|gb|AAG60117.1| copia-... |
| Match: gi|22758275|gb|AAN05503.1| |
score: 39.28 |
e-value: 2.3e-21 |
Identity: 40.48% |
Span: 123bp (17.9%) |
Frame: 2 |
| gi|22758275|gb|AAN05503.1| Putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38345684|emb|CAE04330.2| |
score: 39.28 |
e-value: 2.3e-21 |
Identity: 40.48% |
Span: 123bp (17.9%) |
Frame: 2 |
| gi|38345684|emb|CAE04330.2| OSJNBb0016D16.21 [Oryza sativa (japonica cultivar-group)] gi|38346705|emb|CAE04855.2| OSJ... |
| Match: gi|38344019|emb|CAE03125.2| |
score: 39.28 |
e-value: 2.3e-21 |
Identity: 40.48% |
Span: 123bp (17.9%) |
Frame: 2 |
| gi|38344019|emb|CAE03125.2| OJ000114_01.6 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37536916|ref|NP_922760.1| |
score: 39.28 |
e-value: 2.3e-21 |
Identity: 40.48% |
Span: 123bp (17.9%) |
Frame: 2 |
| gi|37536916|ref|NP_922760.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|12597892|gb|AAG... |
| Match: gi|31249765|gb|AAP46257.1| |
score: 35.81 |
e-value: 7.9e-22 |
Identity: 47.06% |
Span: 102bp (14.8%) |
Frame: 2 |
| putative polyprotein [Oryza sativa Japonica Group] >gi108711922|gb|ABF99717.1| retrotransposon protein, putative, unc... |
| Match: gi|37530416|ref|NP_919510.1| |
score: 35.81 |
e-value: 1e-21 |
Identity: 47.06% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|37530416|ref|NP_919510.1| putative copia-type polyprotein [Oryza sativa (japonica cultivar-group)] gi|18542917|gb|... |
| Match: gi|18071369|gb|AAL58228.1| |
score: 35.81 |
e-value: 2.8e-22 |
Identity: 47.06% |
Span: 102bp (14.8%) |
Frame: 2 |
| gi|18071369|gb|AAL58228.1| putative gag-pol polyprotein [Oryza sativa] |
|
| 362 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 100 hits recorded |
| Match: At4g21360.1 |
score: 107.5 |
e-value: 2.2e-34 |
Identity: 47.87% |
Span: 282bp (41.0%) |
Frame: 3 |
| At4g21360.1 68411.m02820 transposable element -related reverse transcriptase (copia-like retrotransposon), Nicotiana ... |
| Match: At2g07550.1 |
score: 105.1 |
e-value: 6.4e-34 |
Identity: 45.45% |
Span: 297bp (43.2%) |
Frame: 3 |
| At2g07550.1 68409.m00781 retroelement pol polyprotein -related |
| Match: At4g09425.1 |
score: 104.8 |
e-value: 5.7e-32 |
Identity: 49.49% |
Span: 297bp (43.2%) |
Frame: 3 |
| At4g09425.1 68411.m01400 retroelement pol polyprotein -related temporary automated functional assignment |
| Match: At2g13930.1 |
score: 104 |
e-value: 1.3e-31 |
Identity: 50.51% |
Span: 297bp (43.2%) |
Frame: 3 |
| At2g13930.1 68409.m01402 retroelement pol polyprotein -related contains a Zn-finger CCHC type domain (prosite:QDOC501... |
| Match: At5g35820.1 |
score: 103.6 |
e-value: 4.1e-33 |
Identity: 48.48% |
Span: 297bp (43.2%) |
Frame: 3 |
| At5g35820.1 68412.m03867 copia-related retrotransposable element |
| Match: At1g37110.1 |
score: 103.2 |
e-value: 1.5e-32 |
Identity: 47.47% |
Span: 297bp (43.2%) |
Frame: 3 |
| At1g37110.1 68408.m04221 polyprotein -related similar to polyprotein GI:16534 from [Arabidopsis thaliana] |
| Match: At2g15700.1 |
score: 102.4 |
e-value: 5.1e-30 |
Identity: 47.47% |
Span: 297bp (43.2%) |
Frame: 3 |
| At2g15700.1 68409.m01612 copia-related retroelement pol polyprotein |
| Match: At2g21460.1 |
score: 100.9 |
e-value: 2e-32 |
Identity: 44.44% |
Span: 297bp (43.2%) |
Frame: 3 |
| At2g21460.1 68409.m02312 retroelement pol polyprotein -related |
| Match: At2g19840.1 |
score: 100.9 |
e-value: 8e-31 |
Identity: 46.46% |
Span: 297bp (43.2%) |
Frame: 3 |
| At2g19840.1 68409.m02106 copia-related retroelement pol polyprotein |
| Match: At1g47360.1 |
score: 99.37 |
e-value: 3e-30 |
Identity: 49.46% |
Span: 279bp (40.6%) |
Frame: 3 |
| At1g47360.1 68408.m04804 polyprotein -related similar to polyprotein GB:CAA31653 GI:16534 from [Arabidopsis thaliana] |
| Match: At4g10460.1 |
score: 92.05 |
e-value: 7.1e-29 |
Identity: 44% |
Span: 300bp (43.6%) |
Frame: 3 |
| At4g10460.1 68411.m01552 retrotransposon -related Oryza australiensis retrotransposon RIRE1, PID:d1023151 |
| Match: At3g45520.1 |
score: 90.89 |
e-value: 4.2e-29 |
Identity: 42.42% |
Span: 297bp (43.2%) |
Frame: 3 |
| At3g45520.1 68410.m04552 copia-related polyprotein COPIA PROTEIN - Drosophila melanogaster, SWISSPROT:COPI_DROME |
| Match: At1g48710.1 |
score: 90.12 |
e-value: 4.2e-25 |
Identity: 44.79% |
Span: 279bp (40.6%) |
Frame: 3 |
| At1g48710.1 68408.m04991 copia-type polyprotein -related similar to copia-type polyprotein GI:6850900 from [Arabidops... |
| Match: At3g61330.1 |
score: 89.35 |
e-value: 7.1e-25 |
Identity: 44.79% |
Span: 279bp (40.6%) |
Frame: 3 |
| At3g61330.1 68410.m06339 copia-type polyprotein copia polyprotein - Drosophila melanogaster, PIR:OFFFCP |
| Match: At3g59720.1 |
score: 89.35 |
e-value: 7.1e-25 |
Identity: 44.79% |
Span: 279bp (40.6%) |
Frame: 3 |
| At3g59720.1 68410.m06158 copia-type reverse transcriptase-related protein several reverse transcriptases |
| Match: At1g58140.1 |
score: 89.35 |
e-value: 7.1e-25 |
Identity: 44.79% |
Span: 279bp (40.6%) |
Frame: 3 |
| At1g58140.1 68408.m06045 copia-type polyprotein -related similar to copia-type polyprotein GI:6850900 from (Arabidops... |
| Match: At5g13205.1 |
score: 89.35 |
e-value: 7.1e-25 |
Identity: 44.79% |
Span: 279bp (40.6%) |
Frame: 3 |
| At5g13205.1 68412.m01398 copia-type polyprotein -related temporary automated functional assignment |
| Match: At1g11265.1 |
score: 89.35 |
e-value: 7.1e-25 |
Identity: 44.79% |
Span: 279bp (40.6%) |
Frame: 3 |
| At1g11265.1 68408.m01163 copia-type polyprotein identical to copia-type polyprotein GB:CAB71063 GI:6850900 from [Arab... |
| Match: At1g21945.1 |
score: 89.35 |
e-value: 7.1e-25 |
Identity: 44.79% |
Span: 279bp (40.6%) |
Frame: 3 |
| At1g21945.1 68408.m02483 polyprotein -related similar to gag-pol polyprotein GB:AAC64917 GI:3777527 from [Glycine max] |
| Match: At4g09595.1 |
score: 88.97 |
e-value: 2.3e-18 |
Identity: 45.36% |
Span: 282bp (41.0%) |
Frame: 3 |
| At4g09595.1 68411.m01422 copia-related retrotransposable element temporary automated functional assignment |
| Match: At2g15870.1 |
score: 87.04 |
e-value: 8.7e-18 |
Identity: 44% |
Span: 291bp (42.3%) |
Frame: 3 |
| At2g15870.1 68409.m01633 retroelement pol polyprotein -related contains signature integrase DDE motif |
| Match: At1g36620.1 |
score: 85.89 |
e-value: 9.8e-20 |
Identity: 41.84% |
Span: 285bp (41.4%) |
Frame: 3 |
| At1g36620.1 68408.m04146 Ty1/copia-element polyprotein |
| Match: At2g16000.1 |
score: 82.8 |
e-value: 1.6e-16 |
Identity: 43% |
Span: 291bp (42.3%) |
Frame: 3 |
| At2g16000.1 68409.m01646 retroelement pol polyprotein -related |
| Match: At4g04280.1 |
score: 80.49 |
e-value: 4.5e-24 |
Identity: 41.18% |
Span: 255bp (37.1%) |
Frame: 3 |
| At4g04280.1 68411.m00539 transposon protein -related |
| Match: At1g70010.1 |
score: 80.49 |
e-value: 8.4e-18 |
Identity: 40.82% |
Span: 285bp (41.4%) |
Frame: 3 |
| At1g70010.1 68408.m07390 hypothetical protein similar to putative retroelement pol polyprotein GI:4678197 from [Arabi... |
| Match: At1g32590.1 |
score: 80.49 |
e-value: 8.1e-16 |
Identity: 41.82% |
Span: 321bp (46.7%) |
Frame: 3 |
| At1g32590.1 68408.m03642 copia-type polyprotein -related similar to GI:6850900 from [Arabidopsis thaliana] |
| Match: At1g57640.1 |
score: 80.11 |
e-value: 2.4e-17 |
Identity: 38.61% |
Span: 294bp (42.7%) |
Frame: 3 |
| At1g57640.1 68408.m05995 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At4g22040.1 |
score: 80.11 |
e-value: 2.4e-17 |
Identity: 38.61% |
Span: 294bp (42.7%) |
Frame: 3 |
| At4g22040.1 68411.m02915 LTR retrotransposon like protein retrovirus-related polyprotein, fruit fly, transposon copia |
| Match: At3g60170.1 |
score: 79.72 |
e-value: 3e-22 |
Identity: 37.11% |
Span: 282bp (41.0%) |
Frame: 3 |
| At3g60170.1 68410.m06211 hypothetical protein several retrotransposon polyproteins |
| Match: At4g17450.1 |
score: 78.57 |
e-value: 1.8e-17 |
Identity: 39.8% |
Span: 285bp (41.4%) |
Frame: 3 |
| At4g17450.1 68411.m02377 retrotransposon like protein |
| Match: At2g23330.1 |
score: 77.03 |
e-value: 8.4e-18 |
Identity: 40.82% |
Span: 285bp (41.4%) |
Frame: 3 |
| At2g23330.1 68409.m02521 retroelement pol polyprotein -related |
| Match: At3g29775.1 |
score: 76.64 |
e-value: 3.6e-19 |
Identity: 38.78% |
Span: 282bp (41.0%) |
Frame: 3 |
| At3g29775.1 68410.m03476 Ty1/Copia-type retroelement polyprotein similar to gag-pol polyprotein GB:AAC64917 GI:377752... |
| Match: At4g04380.1 |
score: 76.64 |
e-value: 1.7e-23 |
Identity: 41.11% |
Span: 270bp (39.2%) |
Frame: 3 |
| At4g04380.1 68411.m00551 polyprotein -related |
| Match: At2g06950.1 |
score: 76.26 |
e-value: 1.7e-18 |
Identity: 40% |
Span: 303bp (44.0%) |
Frame: 3 |
| At2g06950.1 68409.m00709 retroelement pol polyprotein -related |
| Match: At2g13940.1 |
score: 75.87 |
e-value: 3.8e-18 |
Identity: 36.73% |
Span: 285bp (41.4%) |
Frame: 3 |
| At2g13940.1 68409.m01403 retroelement pol polyprotein -related contains a Zn-finger CCHC type domain (prosite:QDOC501... |
| Match: At2g20460.1 |
score: 75.1 |
e-value: 9.4e-16 |
Identity: 40.82% |
Span: 285bp (41.4%) |
Frame: 3 |
| At2g20460.1 68409.m02171 retroelement pol polyprotein -related |
| Match: At1g31210.1 |
score: 73.56 |
e-value: 7.2e-16 |
Identity: 36.08% |
Span: 282bp (41.0%) |
Frame: 3 |
| At1g31210.1 68408.m03460 reverse transcriptase -related strong similarity to a multitude of putative reverse transcri... |
| Match: At2g14930.1 |
score: 72.02 |
e-value: 5.6e-16 |
Identity: 38.38% |
Span: 282bp (41.0%) |
Frame: 3 |
| At2g14930.1 68409.m01521 retroelement pol polyprotein -related |
| Match: At4g14460.1 |
score: 72.02 |
e-value: 6.8e-17 |
Identity: 36.73% |
Span: 285bp (41.4%) |
Frame: 3 |
| At4g14460.1 68411.m02019 retrovirus-related like polyprotein |
| Match: At4g28900.1 |
score: 71.63 |
e-value: 1.2e-16 |
Identity: 37.11% |
Span: 279bp (40.6%) |
Frame: 3 |
| At4g28900.1 68411.m03763 expressed protein retrofit - Oryza longistaminata, PID:g2586082 |
| Match: At2g07420.1 |
score: 71.25 |
e-value: 1.8e-17 |
Identity: 35.42% |
Span: 279bp (40.6%) |
Frame: 3 |
| At2g07420.1 68409.m00757 retroelement pol polyprotein -related contains weak zinc-finger domains |
| Match: At2g07010.1 |
score: 71.25 |
e-value: 2.5e-16 |
Identity: 37.76% |
Span: 285bp (41.4%) |
Frame: 3 |
| At2g07010.1 68409.m00716 retroelement pol polyprotein -related |
| Match: At4g07840.1 |
score: 71.25 |
e-value: 3e-18 |
Identity: 37.89% |
Span: 282bp (41.0%) |
Frame: 3 |
| At4g07840.1 68411.m01115 transposon protein -related |
| Match: At4g03810.1 |
score: 70.86 |
e-value: 1.4e-18 |
Identity: 37.23% |
Span: 279bp (40.6%) |
Frame: 3 |
| At4g03810.1 68411.m00477 retrotransposon protein -related |
| Match: At1g53810.1 |
score: 70.09 |
e-value: 1.6e-15 |
Identity: 35.64% |
Span: 288bp (41.9%) |
Frame: 3 |
| At1g53810.1 68408.m05618 hypothetical protein similar to putative retroelement pol polyprotein GI:3779021 from [Arabi... |
| Match: At2g24660.1 |
score: 70.09 |
e-value: 4.3e-16 |
Identity: 34.69% |
Span: 285bp (41.4%) |
Frame: 3 |
| At2g24660.1 68409.m02666 retroelement pol polyprotein -related |
| Match: At4g10690.1 |
score: 69.71 |
e-value: 4.5e-15 |
Identity: 37.11% |
Span: 279bp (40.6%) |
Frame: 3 |
| At4g10690.1 68411.m01580 retrotransposon like protein copia-like retrotransposon Hopscotch polyprotein - Zea mays,PID... |
| Match: At2g15650.1 |
score: 69.32 |
e-value: 1.9e-17 |
Identity: 38.38% |
Span: 285bp (41.4%) |
Frame: 3 |
| At2g15650.1 68409.m01606 retroelement pol polyprotein -related |
| Match: At3g25450.1 |
score: 68.55 |
e-value: 8e-19 |
Identity: 37.5% |
Span: 279bp (40.6%) |
Frame: 3 |
| At3g25450.1 68410.m02895 hypothetical protein contains similarity to retrovirus-related pol polyprotein from transpos... |
| Match: At1g56675.1 |
score: 67.4 |
e-value: 3.5e-15 |
Identity: 36.73% |
Span: 285bp (41.4%) |
Frame: 3 |
| At1g56675.1 68408.m05976 hypothetical protein similar to putative retroelement pol polyprotein GI:6850344 from [Arabi... |
| Match: At2g05960.1 |
score: 65.08 |
e-value: 1.9e-17 |
Identity: 38.54% |
Span: 279bp (40.6%) |
Frame: 3 |
| At2g05960.1 68409.m00578 retroelement pol polyprotein -related |
| Match: At2g07550.1 |
score: 56.61 |
e-value: 6.4e-34 |
Identity: 74.29% |
Span: 105bp (15.3%) |
Frame: 2 |
| At2g07550.1 68409.m00781 retroelement pol polyprotein -related |
| Match: At4g21360.1 |
score: 55.84 |
e-value: 2.2e-34 |
Identity: 70.59% |
Span: 102bp (14.8%) |
Frame: 2 |
| At4g21360.1 68411.m02820 transposable element -related reverse transcriptase (copia-like retrotransposon), Nicotiana ... |
| Match: At2g21460.1 |
score: 55.84 |
e-value: 2e-32 |
Identity: 71.43% |
Span: 105bp (15.3%) |
Frame: 2 |
| At2g21460.1 68409.m02312 retroelement pol polyprotein -related |
| Match: At5g35820.1 |
score: 55.45 |
e-value: 4.1e-33 |
Identity: 73.53% |
Span: 102bp (14.8%) |
Frame: 2 |
| At5g35820.1 68412.m03867 copia-related retrotransposable element |
| Match: At3g45520.1 |
score: 54.68 |
e-value: 4.2e-29 |
Identity: 71.43% |
Span: 105bp (15.3%) |
Frame: 2 |
| At3g45520.1 68410.m04552 copia-related polyprotein COPIA PROTEIN - Drosophila melanogaster, SWISSPROT:COPI_DROME |
| Match: At1g37110.1 |
score: 53.91 |
e-value: 1.5e-32 |
Identity: 67.65% |
Span: 102bp (14.8%) |
Frame: 2 |
| At1g37110.1 68408.m04221 polyprotein -related similar to polyprotein GI:16534 from [Arabidopsis thaliana] |
| Match: At4g10460.1 |
score: 52.76 |
e-value: 7.1e-29 |
Identity: 71.43% |
Span: 105bp (15.3%) |
Frame: 2 |
| At4g10460.1 68411.m01552 retrotransposon -related Oryza australiensis retrotransposon RIRE1, PID:d1023151 |
| Match: At4g09425.1 |
score: 50.45 |
e-value: 5.7e-32 |
Identity: 67.65% |
Span: 102bp (14.8%) |
Frame: 2 |
| At4g09425.1 68411.m01400 retroelement pol polyprotein -related temporary automated functional assignment |
| Match: At2g19840.1 |
score: 50.45 |
e-value: 8e-31 |
Identity: 67.65% |
Span: 102bp (14.8%) |
Frame: 2 |
| At2g19840.1 68409.m02106 copia-related retroelement pol polyprotein |
| Match: At4g04380.1 |
score: 50.06 |
e-value: 1.7e-23 |
Identity: 65.71% |
Span: 105bp (15.3%) |
Frame: 2 |
| At4g04380.1 68411.m00551 polyprotein -related |
| Match: At2g13930.1 |
score: 50.06 |
e-value: 1.3e-31 |
Identity: 61.76% |
Span: 102bp (14.8%) |
Frame: 2 |
| At2g13930.1 68409.m01402 retroelement pol polyprotein -related contains a Zn-finger CCHC type domain (prosite:QDOC501... |
| Match: At1g47360.1 |
score: 50.06 |
e-value: 3e-30 |
Identity: 61.76% |
Span: 102bp (14.8%) |
Frame: 2 |
| At1g47360.1 68408.m04804 polyprotein -related similar to polyprotein GB:CAA31653 GI:16534 from [Arabidopsis thaliana] |
| Match: At4g04280.1 |
score: 48.14 |
e-value: 4.5e-24 |
Identity: 84.62% |
Span: 78bp (11.3%) |
Frame: 2 |
| At4g04280.1 68411.m00539 transposon protein -related |
| Match: At4g09595.1 |
score: 48.14 |
e-value: 4.5e-06 |
Identity: 61.76% |
Span: 102bp (14.8%) |
Frame: 2 |
| At4g09595.1 68411.m01422 copia-related retrotransposable element temporary automated functional assignment |
| Match: At2g15700.1 |
score: 46.21 |
e-value: 5.1e-30 |
Identity: 58.82% |
Span: 102bp (14.8%) |
Frame: 2 |
| At2g15700.1 68409.m01612 copia-related retroelement pol polyprotein |
| Match: At1g32590.1 |
score: 43.13 |
e-value: 0.00014 |
Identity: 52.94% |
Span: 102bp (14.8%) |
Frame: 2 |
| At1g32590.1 68408.m03642 copia-type polyprotein -related similar to GI:6850900 from [Arabidopsis thaliana] |
| Match: At3g60170.1 |
score: 42.74 |
e-value: 3e-22 |
Identity: 61.76% |
Span: 102bp (14.8%) |
Frame: 2 |
| At3g60170.1 68410.m06211 hypothetical protein several retrotransposon polyproteins |
| Match: At3g25450.1 |
score: 42.36 |
e-value: 8e-19 |
Identity: 47.37% |
Span: 114bp (16.6%) |
Frame: 2 |
| At3g25450.1 68410.m02895 hypothetical protein contains similarity to retrovirus-related pol polyprotein from transpos... |
| Match: At1g48710.1 |
score: 41.97 |
e-value: 4.2e-25 |
Identity: 55.88% |
Span: 102bp (14.8%) |
Frame: 2 |
| At1g48710.1 68408.m04991 copia-type polyprotein -related similar to copia-type polyprotein GI:6850900 from [Arabidops... |
| Match: At5g13205.1 |
score: 41.97 |
e-value: 7.1e-25 |
Identity: 55.88% |
Span: 102bp (14.8%) |
Frame: 2 |
| At5g13205.1 68412.m01398 copia-type polyprotein -related temporary automated functional assignment |
| Match: At3g61330.1 |
score: 41.97 |
e-value: 7.1e-25 |
Identity: 55.88% |
Span: 102bp (14.8%) |
Frame: 2 |
| At3g61330.1 68410.m06339 copia-type polyprotein copia polyprotein - Drosophila melanogaster, PIR:OFFFCP |
| Match: At1g11265.1 |
score: 41.97 |
e-value: 7.1e-25 |
Identity: 55.88% |
Span: 102bp (14.8%) |
Frame: 2 |
| At1g11265.1 68408.m01163 copia-type polyprotein identical to copia-type polyprotein GB:CAB71063 GI:6850900 from [Arab... |
| Match: At1g58140.1 |
score: 41.97 |
e-value: 7.1e-25 |
Identity: 55.88% |
Span: 102bp (14.8%) |
Frame: 2 |
| At1g58140.1 68408.m06045 copia-type polyprotein -related similar to copia-type polyprotein GI:6850900 from (Arabidops... |
| Match: At1g21945.1 |
score: 41.97 |
e-value: 7.1e-25 |
Identity: 55.88% |
Span: 102bp (14.8%) |
Frame: 2 |
| At1g21945.1 68408.m02483 polyprotein -related similar to gag-pol polyprotein GB:AAC64917 GI:3777527 from [Glycine max] |
| Match: At3g59720.1 |
score: 41.97 |
e-value: 7.1e-25 |
Identity: 55.88% |
Span: 102bp (14.8%) |
Frame: 2 |
| At3g59720.1 68410.m06158 copia-type reverse transcriptase-related protein several reverse transcriptases |
| Match: At2g05960.1 |
score: 41.2 |
e-value: 1.9e-17 |
Identity: 44.74% |
Span: 114bp (16.6%) |
Frame: 2 |
| At2g05960.1 68409.m00578 retroelement pol polyprotein -related |
| Match: At4g03810.1 |
score: 39.28 |
e-value: 1.4e-18 |
Identity: 52.94% |
Span: 102bp (14.8%) |
Frame: 2 |
| At4g03810.1 68411.m00477 retrotransposon protein -related |
| Match: At4g07840.1 |
score: 37.74 |
e-value: 3e-18 |
Identity: 50% |
Span: 102bp (14.8%) |
Frame: 2 |
| At4g07840.1 68411.m01115 transposon protein -related |
| Match: At2g15650.1 |
score: 36.96 |
e-value: 1.9e-17 |
Identity: 43.24% |
Span: 111bp (16.1%) |
Frame: 2 |
| At2g15650.1 68409.m01606 retroelement pol polyprotein -related |
| Match: At3g29775.1 |
score: 35.42 |
e-value: 3.6e-19 |
Identity: 45.45% |
Span: 99bp (14.4%) |
Frame: 2 |
| At3g29775.1 68410.m03476 Ty1/Copia-type retroelement polyprotein similar to gag-pol polyprotein GB:AAC64917 GI:377752... |
| Match: At2g07420.1 |
score: 35.04 |
e-value: 1.8e-17 |
Identity: 50% |
Span: 90bp (13.1%) |
Frame: 2 |
| At2g07420.1 68409.m00757 retroelement pol polyprotein -related contains weak zinc-finger domains |
| Match: At2g06950.1 |
score: 33.5 |
e-value: 1.7e-18 |
Identity: 38.89% |
Span: 108bp (15.7%) |
Frame: 2 |
| At2g06950.1 68409.m00709 retroelement pol polyprotein -related |
| Match: At2g13940.1 |
score: 32.73 |
e-value: 3.8e-18 |
Identity: 47.22% |
Span: 105bp (15.3%) |
Frame: 2 |
| At2g13940.1 68409.m01403 retroelement pol polyprotein -related contains a Zn-finger CCHC type domain (prosite:QDOC501... |
| Match: At4g14460.1 |
score: 32.34 |
e-value: 6.8e-17 |
Identity: 30.95% |
Span: 126bp (18.3%) |
Frame: 2 |
| At4g14460.1 68411.m02019 retrovirus-related like polyprotein |
| Match: At4g28900.1 |
score: 31.96 |
e-value: 1.2e-16 |
Identity: 38.46% |
Span: 117bp (17.0%) |
Frame: 2 |
| At4g28900.1 68411.m03763 expressed protein retrofit - Oryza longistaminata, PID:g2586082 |
| Match: At2g24660.1 |
score: 31.57 |
e-value: 4.3e-16 |
Identity: 46.67% |
Span: 90bp (13.1%) |
Frame: 2 |
| At2g24660.1 68409.m02666 retroelement pol polyprotein -related |
| Match: At1g56675.1 |
score: 31.19 |
e-value: 3.5e-15 |
Identity: 38.89% |
Span: 108bp (15.7%) |
Frame: 2 |
| At1g56675.1 68408.m05976 hypothetical protein similar to putative retroelement pol polyprotein GI:6850344 from [Arabi... |
| Match: At2g07010.1 |
score: 31.19 |
e-value: 2.5e-16 |
Identity: 46.67% |
Span: 90bp (13.1%) |
Frame: 2 |
| At2g07010.1 68409.m00716 retroelement pol polyprotein -related |
| Match: At2g23330.1 |
score: 30.42 |
e-value: 8.4e-18 |
Identity: 47.22% |
Span: 105bp (15.3%) |
Frame: 2 |
| At2g23330.1 68409.m02521 retroelement pol polyprotein -related |
| Match: At1g53810.1 |
score: 29.65 |
e-value: 1.6e-15 |
Identity: 36.11% |
Span: 108bp (15.7%) |
Frame: 2 |
| At1g53810.1 68408.m05618 hypothetical protein similar to putative retroelement pol polyprotein GI:3779021 from [Arabi... |
| Match: At2g14930.1 |
score: 29.26 |
e-value: 5.6e-16 |
Identity: 31.43% |
Span: 105bp (15.3%) |
Frame: 2 |
| At2g14930.1 68409.m01521 retroelement pol polyprotein -related |
| Match: At4g10690.1 |
score: 28.49 |
e-value: 4.5e-15 |
Identity: 36.67% |
Span: 90bp (13.1%) |
Frame: 2 |
| At4g10690.1 68411.m01580 retrotransposon like protein copia-like retrotransposon Hopscotch polyprotein - Zea mays,PID... |
| Match: At1g36620.1 |
score: 28.11 |
e-value: 9.8e-20 |
Identity: 41.94% |
Span: 93bp (13.5%) |
Frame: 2 |
| At1g36620.1 68408.m04146 Ty1/copia-element polyprotein |
| Match: At4g17450.1 |
score: 27.72 |
e-value: 1.8e-17 |
Identity: 30.56% |
Span: 108bp (15.7%) |
Frame: 2 |
| At4g17450.1 68411.m02377 retrotransposon like protein |
| Match: At1g31210.1 |
score: 27.34 |
e-value: 7.2e-16 |
Identity: 40% |
Span: 90bp (13.1%) |
Frame: 2 |
| At1g31210.1 68408.m03460 reverse transcriptase -related strong similarity to a multitude of putative reverse transcri... |
| Match: At1g70010.1 |
score: 26.95 |
e-value: 8.4e-18 |
Identity: 30.56% |
Span: 108bp (15.7%) |
Frame: 2 |
| At1g70010.1 68408.m07390 hypothetical protein similar to putative retroelement pol polyprotein GI:4678197 from [Arabi... |
| Match: At1g57640.1 |
score: 25.79 |
e-value: 2.4e-17 |
Identity: 33.33% |
Span: 108bp (15.7%) |
Frame: 2 |
| At1g57640.1 68408.m05995 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At4g22040.1 |
score: 25.79 |
e-value: 2.4e-17 |
Identity: 33.33% |
Span: 108bp (15.7%) |
Frame: 2 |
| At4g22040.1 68411.m02915 LTR retrotransposon like protein retrovirus-related polyprotein, fruit fly, transposon copia |
| Match: At2g20460.1 |
score: 25.41 |
e-value: 9.4e-16 |
Identity: 38.71% |
Span: 87bp (12.6%) |
Frame: 2 |
| At2g20460.1 68409.m02171 retroelement pol polyprotein -related |
|
| 45 lower scoring hits censored -- only 100 best hits are stored. |
