| arabidopsis/peptide [blastx] | Showing best 5 hits recorded |
| Match: At2G29540.1 |
score: 80.1 |
e-value: 3e-22 |
Identity: 69.81% |
Span: 159bp (22.6%) |
Frame: 1 |
| Symbols: ATRPAC14, ATRPC14 | ATRPC14 (Arabidopsis thaliana RNA polymerase I(A) and III(C) 14 kDa subunit); DNA bindi... |
| Match: At2G29540.2 |
score: 80.1 |
e-value: 3e-22 |
Identity: 69.81% |
Span: 159bp (22.6%) |
Frame: 1 |
| Symbols: ATRPAC14, ATRPC14 | ATRPC14 (Arabidopsis thaliana RNA polymerase I(A) and III(C) 14 kDa subunit); DNA bindi... |
| Match: At3G52090.1 |
score: 45.4 |
e-value: 3e-05 |
Identity: 50% |
Span: 108bp (15.4%) |
Frame: 1 |
| Symbols: ATRPB13.6 | ATRPB13.6 (Arabidopsis thaliana RNA polymerase II 13.6 kDa subunit); DNA binding / DNA-directed... |
| Match: At2G29540.1 |
score: 42.4 |
e-value: 3e-22 |
Identity: 48.57% |
Span: 105bp (14.9%) |
Frame: 3 |
| Symbols: ATRPAC14, ATRPC14 | ATRPC14 (Arabidopsis thaliana RNA polymerase I(A) and III(C) 14 kDa subunit); DNA bindi... |
| Match: At2G29540.2 |
score: 42.4 |
e-value: 3e-22 |
Identity: 48.57% |
Span: 105bp (14.9%) |
Frame: 3 |
| Symbols: ATRPAC14, ATRPC14 | ATRPC14 (Arabidopsis thaliana RNA polymerase I(A) and III(C) 14 kDa subunit); DNA bindi... |
|
| genbank/nr [blastx] | Showing best 63 hits recorded |
| Match: gi|77553282|gb|ABA96078.1| |
score: 88.6 |
e-value: 9e-24 |
Identity: 71.7% |
Span: 159bp (22.6%) |
Frame: 1 |
| gi|77553282|gb|ABA96078.1| RNA polymerase Rpb3/Rpb11 dimerisation domain, putative [Oryza sativa (japonica cultivar-g... |
| Match: gi|15227556|ref|NP_180514.1| |
score: 80.1 |
e-value: 2e-20 |
Identity: 69.81% |
Span: 159bp (22.6%) |
Frame: 1 |
| ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT); DNA binding / DNA-directed RNA polymerase/ protein dimerization [Arabidopsis... |
| Match: gi|49652557|emb|CAG84870.1| |
score: 68.2 |
e-value: 3e-10 |
Identity: 56% |
Span: 150bp (21.3%) |
Frame: 1 |
| gi|49652557|emb|CAG84870.1| unnamed protein product [Debaryomyces hansenii CBS767] >gi|50409649|ref|XP_456893.1| unna... |
| Match: gi|68490974|ref|XP_710709.1| |
score: 68.2 |
e-value: 3e-10 |
Identity: 56% |
Span: 150bp (21.3%) |
Frame: 1 |
| gi|68490974|ref|XP_710709.1| RNA polymerase I and III shared subunit Rpc19 [Candida albicans SC5314] >gi|68491001|ref... |
| Match: gi|50312213|ref|XP_456138.1| |
score: 64.7 |
e-value: 3e-09 |
Identity: 50% |
Span: 156bp (22.2%) |
Frame: 1 |
| gi|50312213|ref|XP_456138.1| unnamed protein product [Kluyveromyces lactis] >gi|49645274|emb|CAG98846.1| unnamed prot... |
| Match: gi|6324215|ref|NP_014286.1| |
score: 63.9 |
e-value: 6e-09 |
Identity: 46.43% |
Span: 168bp (23.9%) |
Frame: 1 |
| gi|6324215|ref|NP_014286.1| subunit common to RNA polymerases I (A) and III (C); Rpc19p [Saccharomyces cerevisiae] gi... |
| Match: gi|50554135|ref|XP_504476.1| |
score: 63.9 |
e-value: 6e-09 |
Identity: 48% |
Span: 150bp (21.3%) |
Frame: 1 |
| gi|50554135|ref|XP_504476.1| hypothetical protein [Yarrowia lipolytica] >gi|49650345|emb|CAG80079.1| unnamed protein ... |
| Match: gi|44984188|gb|AAS53154.1| |
score: 63.9 |
e-value: 2e-09 |
Identity: 48.21% |
Span: 168bp (23.9%) |
Frame: 1 |
| gi|44984188|gb|AAS53154.1| AFL220Cp [Ashbya gossypii ATCC 10895] >gi|45198301|ref|NP_985330.1| AFL220Cp [Eremothecium... |
| Match: gi|49528255|emb|CAG61912.1| |
score: 62.8 |
e-value: 1e-08 |
Identity: 46.43% |
Span: 168bp (23.9%) |
Frame: 1 |
| unnamed |
| Match: gi|3721850|dbj|BAA33719.1| |
score: 62.8 |
e-value: 1e-08 |
Identity: 50% |
Span: 150bp (21.3%) |
Frame: 1 |
| RPA17 |
| Match: gi|66802584|ref|XP_635164.1| |
score: 62.4 |
e-value: 2e-08 |
Identity: 64.29% |
Span: 126bp (17.9%) |
Frame: 1 |
| gi|66802584|ref|XP_635164.1| putative RNA polymerase I subunit [Dictyostelium discoideum] >gi|60463480|gb|EAL61665.1|... |
| Match: gi|111062442|gb|EAT83562.1| |
score: 62 |
e-value: 1e-08 |
Identity: 53.33% |
Span: 135bp (19.2%) |
Frame: 1 |
| predicted |
| Match: gi|4106655|emb|CAA22595.1| |
score: 62 |
e-value: 2e-08 |
Identity: 52.17% |
Span: 138bp (19.6%) |
Frame: 1 |
| gi|4106655|emb|CAA22595.1| rpc19 [Schizosaccharomyces pombe] |
| Match: gi|71005330|ref|XP_757331.1| |
score: 61.2 |
e-value: 4e-08 |
Identity: 54.35% |
Span: 138bp (19.6%) |
Frame: 1 |
| gi|71005330|ref|XP_757331.1| hypothetical protein UM01184.1 [Ustilago maydis 521] >gi|46096735|gb|EAK81968.1| hypothe... |
| Match: gi|58262798|ref|XP_568809.1| |
score: 60.5 |
e-value: 6e-08 |
Identity: 50% |
Span: 150bp (21.3%) |
Frame: 1 |
| DNA-directed |
| Match: gi|72043986|ref|XP_794921.1| |
score: 59.3 |
e-value: 1e-07 |
Identity: 56.1% |
Span: 123bp (17.5%) |
Frame: 1 |
| gi|72043986|ref|XP_794921.1| PREDICTED: similar to DNA-directed RNA polymerase I 16 kDa polypeptide (RPA16) [Strongyl... |
| Match: gi|82180681|sp|Q5XK67|RPO1D_XENLA |
score: 58.2 |
e-value: 6e-09 |
Identity: 50% |
Span: 138bp (19.6%) |
Frame: 1 |
| DNA-directed |
| Match: gi|70984198|ref|XP_747617.1| |
score: 57.4 |
e-value: 5e-07 |
Identity: 48.89% |
Span: 135bp (19.2%) |
Frame: 1 |
| DNA-directed |
| Match: gi|46125119|ref|XP_387113.1| |
score: 57.4 |
e-value: 5e-07 |
Identity: 54.76% |
Span: 126bp (17.9%) |
Frame: 1 |
| gi|46125119|ref|XP_387113.1| hypothetical protein FG06937.1 [Gibberella zeae PH-1] >gi|42554141|gb|EAA76984.1| hypoth... |
| Match: gi|85084361|ref|XP_957305.1| |
score: 57 |
e-value: 7e-07 |
Identity: 52.38% |
Span: 126bp (17.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|89290022|gb|EAR88010.1| |
score: 57 |
e-value: 1e-07 |
Identity: 51.06% |
Span: 141bp (20.1%) |
Frame: 1 |
| RNA |
| Match: gi|67540776|ref|XP_664162.1| |
score: 56.6 |
e-value: 9e-07 |
Identity: 52.38% |
Span: 126bp (17.9%) |
Frame: 1 |
| gi|67540776|ref|XP_664162.1| hypothetical protein AN6558.2 [Aspergillus nidulans FGSC A4] >gi|40738708|gb|EAA57898.1|... |
| Match: gi|90307723|gb|EAS37354.1| |
score: 56.2 |
e-value: 1e-06 |
Identity: 46.67% |
Span: 135bp (19.2%) |
Frame: 1 |
| hypothetical |
| Match: gi|50746102|ref|XP_426271.1| |
score: 56.2 |
e-value: 1e-08 |
Identity: 50% |
Span: 138bp (19.6%) |
Frame: 1 |
| gi|50746102|ref|XP_426271.1| PREDICTED: similar to DNA-directed RNA polymerase I 16 kDa polypeptide (RPA16) [Gallus g... |
| Match: gi|71080043|ref|XP_779102.1| |
score: 55.5 |
e-value: 2e-06 |
Identity: 50% |
Span: 126bp (17.9%) |
Frame: 1 |
| gi|71080043|ref|XP_779102.1| RNA polymerase small subunit [Giardia lamblia ATCC 50803] >gi|29250803|gb|EAA42291.1| GL... |
| Match: gi|49619017|gb|AAT68093.1| |
score: 55.5 |
e-value: 8e-09 |
Identity: 47.83% |
Span: 138bp (19.6%) |
Frame: 1 |
| gi|49619017|gb|AAT68093.1| RNA polymerase I polypeptide D [Danio rerio] >gi|51468043|ref|NP_001003888.1| RNA polymera... |
| Match: gi|6677791|ref|NP_033113.1| |
score: 55.1 |
e-value: 3e-06 |
Identity: 45.65% |
Span: 138bp (19.6%) |
Frame: 1 |
| gi|6677791|ref|NP_033113.1| RNA polymerase 1-3; RIKEN cDNA 1110003G10 [Mus musculus] gi|11387094|sp|P97304|RPA9_MOUSE... |
| Match: gi|76631531|ref|XP_584559.2| |
score: 55.1 |
e-value: 2e-08 |
Identity: 45.65% |
Span: 138bp (19.6%) |
Frame: 1 |
| gi|76631531|ref|XP_584559.2| PREDICTED: similar to DNA-directed RNA polymerase I 16 kDa polypeptide (RPA16) [Bos taur... |
| Match: gi|7705740|ref|NP_057056.1| |
score: 55.1 |
e-value: 3e-06 |
Identity: 45.65% |
Span: 138bp (19.6%) |
Frame: 1 |
| gi|7705740|ref|NP_057056.1| RNA polymerase I 16 kDa subunit [Homo sapiens] gi|11387119|sp|Q9Y2S0|RPA9_HUMAN DNA-direc... |
| Match: gi|109121411|ref|XP_001110871.1| |
score: 55.1 |
e-value: 3e-06 |
Identity: 45.65% |
Span: 138bp (19.6%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|92096988|gb|AAI14906.1| |
score: 55.1 |
e-value: 2e-08 |
Identity: 45.65% |
Span: 138bp (19.6%) |
Frame: 1 |
| POLR1D |
| Match: gi|47187235|emb|CAG14790.1| |
score: 53.1 |
e-value: 1e-05 |
Identity: 45.65% |
Span: 138bp (19.6%) |
Frame: 1 |
| gi|47187235|emb|CAG14790.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|88687070|emb|CAJ43896.1| |
score: 52.8 |
e-value: 1e-05 |
Identity: 41.82% |
Span: 162bp (23.0%) |
Frame: 1 |
| RNA |
| Match: gi|71756079|ref|XP_828954.1| |
score: 52.8 |
e-value: 1e-05 |
Identity: 41.82% |
Span: 162bp (23.0%) |
Frame: 1 |
| DNA-dependent |
| Match: gi|88183890|gb|EAQ91358.1| |
score: 52 |
e-value: 2e-05 |
Identity: 47.62% |
Span: 126bp (17.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|77549279|gb|ABA92076.1| |
score: 50.8 |
e-value: 5e-05 |
Identity: 60% |
Span: 105bp (14.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|74846694|sp|Q61IX2|RPO1D_CAEBR |
score: 49.7 |
e-value: 0.0001 |
Identity: 37.5% |
Span: 165bp (23.5%) |
Frame: 1 |
| Probable |
| Match: gi|39976817|ref|XP_369796.1| |
score: 49.3 |
e-value: 0.0001 |
Identity: 40% |
Span: 135bp (19.2%) |
Frame: 1 |
| hypothetical |
| Match: gi|24585154|ref|NP_609950.1| |
score: 49.3 |
e-value: 5e-07 |
Identity: 42.22% |
Span: 135bp (19.2%) |
Frame: 1 |
| gi|24585154|ref|NP_609950.1| CG10685-PA [Drosophila melanogaster] gi|7298551|gb|AAF53770.1| CG10685-PA [Drosophila me... |
| Match: gi|70949116|ref|XP_743999.1| |
score: 48.9 |
e-value: 9e-06 |
Identity: 40.68% |
Span: 177bp (25.2%) |
Frame: 1 |
| gi|70949116|ref|XP_743999.1| RNA polymerase small subunit, putative [Plasmodium chabaudi] >gi|56523760|emb|CAH77311.1... |
| Match: gi|71421443|ref|XP_811802.1| |
score: 47.4 |
e-value: 7e-05 |
Identity: 43.48% |
Span: 138bp (19.6%) |
Frame: 1 |
| DNA-directed |
| Match: gi|71416664|ref|XP_810336.1| |
score: 47.4 |
e-value: 9e-05 |
Identity: 43.48% |
Span: 138bp (19.6%) |
Frame: 1 |
| DNA-dependent |
| Match: gi|30174498|gb|EAA14103.2| |
score: 47.4 |
e-value: 7e-06 |
Identity: 40% |
Span: 135bp (19.2%) |
Frame: 1 |
| gi|30174498|gb|EAA14103.2| ENSANGP00000022241 [Anopheles gambiae str. PEST] >gi|31232297|ref|XP_318678.1| ENSANGP0000... |
| Match: gi|54640542|gb|EAL29383.1| |
score: 47 |
e-value: 4e-06 |
Identity: 40% |
Span: 135bp (19.2%) |
Frame: 1 |
| GA10493-PA |
| Match: gi|108871328|gb|EAT35553.1| |
score: 45.4 |
e-value: 7e-05 |
Identity: 41.46% |
Span: 123bp (17.5%) |
Frame: 1 |
| DNA-directed |
| Match: gi|77553282|gb|ABA96078.1| |
score: 45.4 |
e-value: 9e-24 |
Identity: 46.51% |
Span: 129bp (18.3%) |
Frame: 3 |
| gi|77553282|gb|ABA96078.1| RNA polymerase Rpb3/Rpb11 dimerisation domain, putative [Oryza sativa (japonica cultivar-g... |
| Match: gi|15227556|ref|NP_180514.1| |
score: 42.4 |
e-value: 2e-20 |
Identity: 48.57% |
Span: 105bp (14.9%) |
Frame: 3 |
| ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT); DNA binding / DNA-directed RNA polymerase/ protein dimerization [Arabidopsis... |
| Match: gi|24585154|ref|NP_609950.1| |
score: 28.1 |
e-value: 5e-07 |
Identity: 37.14% |
Span: 105bp (14.9%) |
Frame: 3 |
| gi|24585154|ref|NP_609950.1| CG10685-PA [Drosophila melanogaster] gi|7298551|gb|AAF53770.1| CG10685-PA [Drosophila me... |
| Match: gi|49619017|gb|AAT68093.1| |
score: 28.1 |
e-value: 8e-09 |
Identity: 33.33% |
Span: 117bp (16.6%) |
Frame: 3 |
| gi|49619017|gb|AAT68093.1| RNA polymerase I polypeptide D [Danio rerio] >gi|51468043|ref|NP_001003888.1| RNA polymera... |
| Match: gi|76631531|ref|XP_584559.2| |
score: 27.3 |
e-value: 2e-08 |
Identity: 35.29% |
Span: 102bp (14.5%) |
Frame: 3 |
| gi|76631531|ref|XP_584559.2| PREDICTED: similar to DNA-directed RNA polymerase I 16 kDa polypeptide (RPA16) [Bos taur... |
| Match: gi|54640542|gb|EAL29383.1| |
score: 27.3 |
e-value: 4e-06 |
Identity: 37.14% |
Span: 105bp (14.9%) |
Frame: 3 |
| GA10493-PA |
| Match: gi|92096988|gb|AAI14906.1| |
score: 27.3 |
e-value: 2e-08 |
Identity: 35.29% |
Span: 102bp (14.5%) |
Frame: 3 |
| POLR1D |
| Match: gi|50746102|ref|XP_426271.1| |
score: 26.6 |
e-value: 1e-08 |
Identity: 41.38% |
Span: 87bp (12.4%) |
Frame: 3 |
| gi|50746102|ref|XP_426271.1| PREDICTED: similar to DNA-directed RNA polymerase I 16 kDa polypeptide (RPA16) [Gallus g... |
| Match: gi|30174498|gb|EAA14103.2| |
score: 26.2 |
e-value: 7e-06 |
Identity: 33.33% |
Span: 90bp (12.8%) |
Frame: 3 |
| gi|30174498|gb|EAA14103.2| ENSANGP00000022241 [Anopheles gambiae str. PEST] >gi|31232297|ref|XP_318678.1| ENSANGP0000... |
| Match: gi|82180681|sp|Q5XK67|RPO1D_XENLA |
score: 25.8 |
e-value: 6e-09 |
Identity: 32.35% |
Span: 102bp (14.5%) |
Frame: 3 |
| DNA-directed |
| Match: gi|108871328|gb|EAT35553.1| |
score: 24.6 |
e-value: 7e-05 |
Identity: 37.04% |
Span: 81bp (11.5%) |
Frame: 3 |
| DNA-directed |
| Match: gi|70949116|ref|XP_743999.1| |
score: 24.3 |
e-value: 9e-06 |
Identity: 37.93% |
Span: 87bp (12.4%) |
Frame: 3 |
| gi|70949116|ref|XP_743999.1| RNA polymerase small subunit, putative [Plasmodium chabaudi] >gi|56523760|emb|CAH77311.1... |
| Match: gi|71421443|ref|XP_811802.1| |
score: 22.7 |
e-value: 7e-05 |
Identity: 27.78% |
Span: 108bp (15.4%) |
Frame: 3 |
| DNA-directed |
| Match: gi|89290022|gb|EAR88010.1| |
score: 22.3 |
e-value: 1e-07 |
Identity: 24.24% |
Span: 99bp (14.1%) |
Frame: 3 |
| RNA |
| Match: gi|71416664|ref|XP_810336.1| |
score: 22.3 |
e-value: 9e-05 |
Identity: 27.78% |
Span: 108bp (15.4%) |
Frame: 3 |
| DNA-dependent |
| Match: gi|44984188|gb|AAS53154.1| |
score: 21.6 |
e-value: 2e-09 |
Identity: 37.04% |
Span: 81bp (11.5%) |
Frame: 3 |
| gi|44984188|gb|AAS53154.1| AFL220Cp [Ashbya gossypii ATCC 10895] >gi|45198301|ref|NP_985330.1| AFL220Cp [Eremothecium... |
| Match: gi|111062442|gb|EAT83562.1| |
score: 21.2 |
e-value: 1e-08 |
Identity: 38.1% |
Span: 63bp (9.0%) |
Frame: 3 |
| predicted |
| Match: gi|50312213|ref|XP_456138.1| |
score: 20.4 |
e-value: 3e-09 |
Identity: 37.04% |
Span: 81bp (11.5%) |
Frame: 3 |
| gi|50312213|ref|XP_456138.1| unnamed protein product [Kluyveromyces lactis] >gi|49645274|emb|CAG98846.1| unnamed prot... |
|
| 70 lower scoring hits censored -- only 63 best hits are stored. |
