| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|21591633|gb|AAM64164.1| |
score: 202.6 |
e-value: 4.2e-51 |
Identity: 68.79% |
Span: 495bp (69.8%) |
Frame: 3 |
| gi|21591633|gb|AAM64164.1| cleavage stimulation factor 64 [Arabidopsis thaliana] |
| Match: gi|22330574|ref|NP_177325.2| |
score: 202.6 |
e-value: 4.2e-51 |
Identity: 69.36% |
Span: 495bp (69.8%) |
Frame: 3 |
| cleavage stimulation factor, putative [Arabidopsis thaliana] >gi7239507|gb|AAF43233.1|AC012654_17 Contains similarity... |
| Match: gi|4557493|ref|NP_001316.1| |
score: 130.2 |
e-value: 2.6e-29 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 3 |
| gi|4557493|ref|NP_001316.1| cleavage stimulation factor subunit 2 [Homo sapiens] gi|461847|sp|P33240|CST2_HUMAN Cleav... |
| Match: gi|21619877|gb|AAH33135.1| |
score: 130.2 |
e-value: 2.6e-29 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 3 |
| gi|21619877|gb|AAH33135.1| Similar to cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kD [Homo sapiens] |
| Match: gi|27807239|ref|NP_777110.1| |
score: 130.2 |
e-value: 2.6e-29 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 3 |
| gi|27807239|ref|NP_777110.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Bos taurus] gi|24416593|gb|AA... |
| Match: gi|22478042|gb|AAH36719.1| |
score: 130.2 |
e-value: 2.6e-29 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 3 |
| gi|22478042|gb|AAH36719.1| Unknown (protein for MGC:36412) [Mus musculus] |
| Match: gi|27735464|gb|AAH41291.1| |
score: 130.2 |
e-value: 2.6e-29 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 3 |
| gi|27735464|gb|AAH41291.1| Cstf-64-prov protein [Xenopus laevis] |
| Match: gi|26328597|dbj|BAC28037.1| |
score: 130.2 |
e-value: 2.6e-29 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 3 |
| gi|26328597|dbj|BAC28037.1| unnamed protein product [Mus musculus] |
| Match: gi|34810648|pdb|1P1T|A |
score: 130.2 |
e-value: 2.6e-29 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 3 |
| gi|34810648|pdb|1P1T|A Chain A, Nmr Structure Of The N-Terminal Rrm Domain Of Cleavage Stimulation Factor 64 Kda Subunit |
| Match: gi|18875338|ref|NP_573459.1| |
score: 130.2 |
e-value: 2.6e-29 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 3 |
| gi|18875338|ref|NP_573459.1| cleavage stimulation factor, 3' pre-RNA subunit 2; cleavage stimulation factor, 3' pre-R... |
| Match: gi|632500|gb|AAB50269.1| |
score: 130.2 |
e-value: 2.6e-29 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 3 |
| gi|632500|gb|AAB50269.1| polyadenylation factor 64 kDa subunit |
| Match: gi|26351239|dbj|BAC39256.1| |
score: 124 |
e-value: 1.9e-27 |
Identity: 63.27% |
Span: 294bp (41.5%) |
Frame: 3 |
| gi|26351239|dbj|BAC39256.1| unnamed protein product [Mus musculus] |
| Match: gi|26330250|dbj|BAC28855.1| |
score: 124 |
e-value: 1.9e-27 |
Identity: 63.27% |
Span: 294bp (41.5%) |
Frame: 3 |
| gi|26330250|dbj|BAC28855.1| unnamed protein product [Mus musculus] gi|26350087|dbj|BAC38683.1| unnamed protein produc... |
| Match: gi|26341156|dbj|BAC34240.1| |
score: 124 |
e-value: 1.9e-27 |
Identity: 63.27% |
Span: 294bp (41.5%) |
Frame: 3 |
| gi|26341156|dbj|BAC34240.1| unnamed protein product [Mus musculus] |
| Match: gi|34862808|ref|XP_219809.2| |
score: 124 |
e-value: 1.9e-27 |
Identity: 63.27% |
Span: 294bp (41.5%) |
Frame: 3 |
| gi|34862808|ref|XP_219809.2| similar to Cstf2t-pending protein [Rattus norvegicus] |
| Match: gi|13752575|ref|NP_112539.1| |
score: 124 |
e-value: 1.9e-27 |
Identity: 63.27% |
Span: 294bp (41.5%) |
Frame: 3 |
| gi|13752575|ref|NP_112539.1| cleavage stimulation factor, 3' pre-RNA subunit 2, tau; cleavage stimulation factor, 3' ... |
| Match: gi|20380061|gb|AAH28239.1| |
score: 124 |
e-value: 1.9e-27 |
Identity: 63.27% |
Span: 294bp (41.5%) |
Frame: 3 |
| gi|20380061|gb|AAH28239.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant [Homo sapiens] |
| Match: gi|14149675|ref|NP_056050.1| |
score: 124 |
e-value: 1.9e-27 |
Identity: 63.27% |
Span: 294bp (41.5%) |
Frame: 3 |
| gi|14149675|ref|NP_056050.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant [Homo sapiens] gi... |
| Match: gi|20072518|gb|AAH26995.1| |
score: 124 |
e-value: 1.9e-27 |
Identity: 63.27% |
Span: 294bp (41.5%) |
Frame: 3 |
| gi|20072518|gb|AAH26995.1| Cstf2t-pending protein [Mus musculus] |
| Match: gi|17137710|ref|NP_477453.1| |
score: 122.1 |
e-value: 7.2e-27 |
Identity: 68.6% |
Span: 258bp (36.4%) |
Frame: 3 |
| gi|17137710|ref|NP_477453.1| Cleavage stimulation factor 64 kilodalton subunit CG7697-PA [Drosophila melanogaster] gi... |
| Match: gi|28557621|gb|AAO45216.1| |
score: 122.1 |
e-value: 7.2e-27 |
Identity: 68.6% |
Span: 258bp (36.4%) |
Frame: 3 |
| gi|28557621|gb|AAO45216.1| RE27227p [Drosophila melanogaster] |
| Match: gi|31201653|ref|XP_309774.1| |
score: 119.8 |
e-value: 3.6e-26 |
Identity: 68.6% |
Span: 258bp (36.4%) |
Frame: 3 |
| gi|31201653|ref|XP_309774.1| ENSANGP00000012477 [Anopheles gambiae] gi|21293399|gb|EAA05544.1| ENSANGP00000012477 [An... |
| Match: gi|31209465|ref|XP_313699.1| |
score: 115.5 |
e-value: 6.7e-25 |
Identity: 68.6% |
Span: 258bp (36.4%) |
Frame: 3 |
| gi|31209465|ref|XP_313699.1| ENSANGP00000003770 [Anopheles gambiae] gi|21296984|gb|EAA09129.1| ENSANGP00000003770 [An... |
| Match: gi|31209491|ref|XP_313712.1| |
score: 110.9 |
e-value: 1.7e-23 |
Identity: 67.47% |
Span: 249bp (35.1%) |
Frame: 3 |
| gi|31209491|ref|XP_313712.1| ENSANGP00000017004 [Anopheles gambiae] gi|21297159|gb|EAA09304.1| ENSANGP00000017004 [An... |
| Match: gi|38099305|gb|EAA46664.1| |
score: 102.1 |
e-value: 7.7e-21 |
Identity: 45.76% |
Span: 354bp (49.9%) |
Frame: 3 |
| gi|38099305|gb|EAA46664.1| hypothetical protein MG09885.4 [Magnaporthe grisea 70-15] |
| Match: gi|19114796|ref|NP_593884.1| |
score: 100.1 |
e-value: 2.9e-20 |
Identity: 59.49% |
Span: 237bp (33.4%) |
Frame: 3 |
| gi|19114796|ref|NP_593884.1| putative cleavage or polyadenylation factor [Schizosaccharomyces pombe] gi|7708595|emb|C... |
| Match: gi|19113461|ref|NP_596669.1| |
score: 93.59 |
e-value: 2.7e-18 |
Identity: 50% |
Span: 258bp (36.4%) |
Frame: 3 |
| gi|19113461|ref|NP_596669.1| putative polyadenylation factor [Schizosaccharomyces pombe] gi|15213955|sp|O43040|CTF1_S... |
| Match: gi|24416589|gb|AAN05428.1| |
score: 92.43 |
e-value: 6.1e-18 |
Identity: 62.5% |
Span: 216bp (30.5%) |
Frame: 3 |
| gi|24416589|gb|AAN05428.1| tCstF-64 [Bos taurus] |
| Match: gi|17553656|ref|NP_499734.1| |
score: 90.12 |
e-value: 3e-17 |
Identity: 44.55% |
Span: 330bp (46.5%) |
Frame: 3 |
| gi|17553656|ref|NP_499734.1| cleavage and Polyadenylation Factor (cpf-2) [Caenorhabditis elegans] gi|7504374|pir||T22... |
| Match: gi|28279277|gb|AAH46091.1| |
score: 86.27 |
e-value: 4.4e-16 |
Identity: 75.93% |
Span: 162bp (22.8%) |
Frame: 3 |
| gi|28279277|gb|AAH46091.1| Unknown (protein for MGC:56346) [Danio rerio] |
| Match: gi|6321394|ref|NP_011471.1| |
score: 85.89 |
e-value: 5.7e-16 |
Identity: 40.45% |
Span: 267bp (37.7%) |
Frame: 3 |
| gi|6321394|ref|NP_011471.1| Protein with a role in mRNA stability and/or poly(A) tail length; Rna15p [Saccharomyces c... |
| Match: gi|1813684|gb|AAC47624.1| |
score: 84.34 |
e-value: 1.7e-15 |
Identity: 50.65% |
Span: 231bp (32.6%) |
Frame: 3 |
| gi|1813684|gb|AAC47624.1| putative RNA binding protein [Brugia malayi] |
| Match: gi|23490246|gb|EAA22070.1| |
score: 75.87 |
e-value: 5.9e-13 |
Identity: 35.45% |
Span: 330bp (46.5%) |
Frame: 3 |
| gi|23490246|gb|EAA22070.1| synthetic antigen of P.falciparum, putative [Plasmodium yoelii yoelii] |
| Match: gi|19173364|ref|NP_597167.1| |
score: 75.1 |
e-value: 1e-12 |
Identity: 44.87% |
Span: 234bp (33.0%) |
Frame: 3 |
| gi|19173364|ref|NP_597167.1| CLEAVAGE STIMULATION FACTOR [Encephalitozoon cuniculi] gi|19170953|emb|CAD26343.1| CLEAV... |
| Match: gi|17508567|ref|NP_493029.1| |
score: 73.56 |
e-value: 2.9e-12 |
Identity: 43.9% |
Span: 246bp (34.7%) |
Frame: 3 |
| gi|17508567|ref|NP_493029.1| cleavage stimulation factor 3' pre-RNA 64kDa like (1M523) [Caenorhabditis elegans] gi|75... |
| Match: gi|23613842|ref|NP_704863.1| |
score: 73.17 |
e-value: 3.8e-12 |
Identity: 40.7% |
Span: 258bp (36.4%) |
Frame: 3 |
| gi|23613842|ref|NP_704863.1| mRNA processing protein, putative [Plasmodium falciparum 3D7] gi|23505226|emb|CAD52006.1... |
| Match: gi|34897348|ref|NP_910020.1| |
score: 72.4 |
e-value: 6.5e-12 |
Identity: 42.53% |
Span: 261bp (36.8%) |
Frame: 3 |
| gi|34897348|ref|NP_910020.1| putative small nuclear ribonucleoprotein [Oryza sativa] gi|15042832|gb|AAK82455.1| putat... |
| Match: gi|17508585|ref|NP_493022.1| |
score: 70.86 |
e-value: 1.9e-11 |
Identity: 41.56% |
Span: 231bp (32.6%) |
Frame: 3 |
| gi|17508585|ref|NP_493022.1| small nucleic-acid-binding protein, enriched in embryos and the germline; closely relate... |
| Match: gi|31200451|ref|XP_309173.1| |
score: 69.71 |
e-value: 4.2e-11 |
Identity: 34.82% |
Span: 306bp (43.2%) |
Frame: 3 |
| gi|31200451|ref|XP_309173.1| ENSANGP00000018775 [Anopheles gambiae] gi|30178557|gb|EAA04971.2| ENSANGP00000018775 [An... |
| Match: gi|29654486|ref|NP_820178.1| |
score: 69.32 |
e-value: 5.5e-11 |
Identity: 31.25% |
Span: 288bp (40.6%) |
Frame: 3 |
| gi|29654486|ref|NP_820178.1| nucleic acid binding domain protein [Coxiella burnetii RSA 493] gi|29541753|gb|AAO90692.... |
| Match: gi|32422445|ref|XP_331666.1| |
score: 69.32 |
e-value: 5.5e-11 |
Identity: 40.91% |
Span: 264bp (37.2%) |
Frame: 3 |
| gi|32422445|ref|XP_331666.1| hypothetical protein [Neurospora crassa] gi|28926863|gb|EAA35825.1| hypothetical protein... |
| Match: gi|23136705|ref|ZP_00118421.1| |
score: 67.78 |
e-value: 1.6e-10 |
Identity: 38.71% |
Span: 279bp (39.4%) |
Frame: 3 |
| gi|23136705|ref|ZP_00118421.1| COG0724: RNA-binding proteins (RRM domain) [Cytophaga hutchinsonii] |
| Match: gi|23040686|ref|ZP_00072187.1| |
score: 67.78 |
e-value: 1.6e-10 |
Identity: 36.56% |
Span: 273bp (38.5%) |
Frame: 3 |
| gi|23040686|ref|ZP_00072187.1| COG0724: RNA-binding proteins (RRM domain) [Trichodesmium erythraeum IMS101] |
| Match: gi|15822703|gb|AAL07518.1| |
score: 67.4 |
e-value: 2.1e-10 |
Identity: 26.92% |
Span: 390bp (55.0%) |
Frame: 3 |
| RNA-binding protein precursor [Nicotiana tabacum] |
| Match: gi|32476441|ref|NP_869435.1| |
score: 67.01 |
e-value: 2.7e-10 |
Identity: 38.71% |
Span: 279bp (39.4%) |
Frame: 3 |
| gi|32476441|ref|NP_869435.1| RNA-binding protein [Pirellula sp.] gi|32446986|emb|CAD78892.1| RNA-binding protein [Pir... |
| Match: gi|133246|sp|P19682|ROC3_NICSY |
score: 66.63 |
e-value: 3.6e-10 |
Identity: 41.03% |
Span: 234bp (33.0%) |
Frame: 3 |
| gi|133246|sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) gi|100388|pir||S12109 ribonucl... |
| Match: gi|38099110|gb|EAA46497.1| |
score: 66.24 |
e-value: 4.7e-10 |
Identity: 40% |
Span: 240bp (33.9%) |
Frame: 3 |
| gi|38099110|gb|EAA46497.1| hypothetical protein MG08840.4 [Magnaporthe grisea 70-15] |
| Match: gi|5531845|gb|AAD44497.1| |
score: 66.24 |
e-value: 4.7e-10 |
Identity: 31.03% |
Span: 306bp (43.2%) |
Frame: 3 |
| gi|5531845|gb|AAD44497.1| RNA-binding protein [Homo sapiens] |
| Match: gi|4938275|emb|CAB43745.1| |
score: 66.24 |
e-value: 4.7e-10 |
Identity: 31.03% |
Span: 306bp (43.2%) |
Frame: 3 |
| gi|4938275|emb|CAB43745.1| hypothetical protein [Homo sapiens] |
| Match: gi|7706316|ref|NP_057108.1| |
score: 66.24 |
e-value: 4.7e-10 |
Identity: 31.03% |
Span: 306bp (43.2%) |
Frame: 3 |
| gi|7706316|ref|NP_057108.1| CGI-79 protein [Homo sapiens] gi|13124027|sp|Q9Y388|CG79_HUMAN Hypothetical protein CGI-7... |
| Match: gi|133248|sp|P19683|ROC4_NICSY |
score: 65.85 |
e-value: 6.1e-10 |
Identity: 40.45% |
Span: 267bp (37.7%) |
Frame: 3 |
| gi|133248|sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor gi|100295|pir||S22548 ribonucleoprotei... |
| Match: gi|27734072|ref|NP_775552.1| |
score: 65.85 |
e-value: 6.1e-10 |
Identity: 33% |
Span: 270bp (38.1%) |
Frame: 3 |
| gi|27734072|ref|NP_775552.1| RIKEN cDNA 2810411A03 [Mus musculus] gi|20071694|gb|AAH26976.1| RIKEN cDNA 2810411A03 [M... |
| Match: gi|7439994|pir||T06796 |
score: 65.47 |
e-value: 8e-10 |
Identity: 31.52% |
Span: 276bp (38.9%) |
Frame: 3 |
| gi|7439994|pir||T06796 glycine-rich RNA-binding protein - garden pea gi|1778374|gb|AAB71417.1| glycine-rich RNA-bindi... |
| Match: gi|33239465|ref|NP_874407.1| |
score: 65.08 |
e-value: 1e-09 |
Identity: 35.48% |
Span: 279bp (39.4%) |
Frame: 3 |
| gi|33239465|ref|NP_874407.1| RNA-binding protein, RRM domain [Prochlorococcus marinus subsp. marinus str. CCMP1375] g... |
| Match: gi|15645446|ref|NP_207620.1| |
score: 65.08 |
e-value: 1e-09 |
Identity: 40.24% |
Span: 246bp (34.7%) |
Frame: 3 |
| gi|15645446|ref|NP_207620.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori 26695] gi|7465380|pir||C646... |
| Match: gi|15229525|ref|NP_189025.1| |
score: 65.08 |
e-value: 1e-09 |
Identity: 32.98% |
Span: 282bp (39.8%) |
Frame: 3 |
| GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding / single-stranded DNA binding [A... |
| Match: gi|17508587|ref|NP_493023.1| |
score: 65.08 |
e-value: 1e-09 |
Identity: 39.47% |
Span: 228bp (32.2%) |
Frame: 3 |
| gi|17508587|ref|NP_493023.1| small nucleic-acid-binding protein; closely related to 3' pre-RNA cleavage stimulation f... |
| Match: gi|21553972|gb|AAM63053.1| |
score: 65.08 |
e-value: 1e-09 |
Identity: 32.98% |
Span: 282bp (39.8%) |
Frame: 3 |
| glycine-rich RNA binding protein, putative [Arabidopsis thaliana] |
| Match: gi|15239505|ref|NP_200911.1| |
score: 65.08 |
e-value: 1e-09 |
Identity: 32.73% |
Span: 330bp (46.5%) |
Frame: 3 |
| GR-RBP3 (glycine-rich RNA-binding protein 3); ATP binding / RNA binding [Arabidopsis thaliana] >gi9759450|dbj|BAB1036... |
| Match: gi|37520960|ref|NP_924337.1| |
score: 64.7 |
e-value: 1.4e-09 |
Identity: 36.26% |
Span: 273bp (38.5%) |
Frame: 3 |
| gi|37520960|ref|NP_924337.1| RNA-binding protein [Gloeobacter violaceus] gi|35211955|dbj|BAC89332.1| RNA-binding prot... |
| Match: gi|12230584|sp|Q08935|ROC1_NICSY |
score: 64.7 |
e-value: 1.4e-09 |
Identity: 29.2% |
Span: 339bp (47.8%) |
Frame: 3 |
| gi|12230584|sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) gi|100293|pir||S20069 ribo... |
| Match: gi|15822705|gb|AAL07519.1| |
score: 64.7 |
e-value: 1.4e-09 |
Identity: 30.56% |
Span: 324bp (45.7%) |
Frame: 3 |
| RNA-binding protein precursor [Solanum tuberosum] |
| Match: gi|34881616|ref|XP_346356.1| |
score: 64.7 |
e-value: 1.4e-09 |
Identity: 35% |
Span: 270bp (38.1%) |
Frame: 3 |
| gi|34881616|ref|XP_346356.1| similar to RIKEN cDNA 2810411A03 [Rattus norvegicus] |
| Match: gi|33860573|ref|NP_892134.1| |
score: 64.7 |
e-value: 1.4e-09 |
Identity: 35.48% |
Span: 279bp (39.4%) |
Frame: 3 |
| gi|33860573|ref|NP_892134.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus marinus subsp. pastori... |
| Match: gi|18411454|ref|NP_567192.1| |
score: 64.31 |
e-value: 1.8e-09 |
Identity: 36.84% |
Span: 228bp (32.2%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi79324963|ref|NP_001031566.1| RNA recognition... |
| Match: gi|15232729|ref|NP_190296.1| |
score: 64.31 |
e-value: 1.8e-09 |
Identity: 35.63% |
Span: 261bp (36.8%) |
Frame: 3 |
| gi|15232729|ref|NP_190296.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|11346382|pir||T... |
| Match: gi|13278367|gb|AAH04000.1| |
score: 63.54 |
e-value: 3e-09 |
Identity: 39.73% |
Span: 219bp (30.9%) |
Frame: 3 |
| gi|13278367|gb|AAH04000.1| Rnpc2 protein [Mus musculus] |
| Match: gi|133247|sp|P28644|ROC1_SPIOL |
score: 63.54 |
e-value: 3e-09 |
Identity: 41.03% |
Span: 234bp (33.0%) |
Frame: 3 |
| gi|133247|sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast (28RNP) |
| Match: gi|29367529|gb|AAO72620.1| |
score: 63.54 |
e-value: 3e-09 |
Identity: 33.9% |
Span: 333bp (47.0%) |
Frame: 3 |
| gi|29367529|gb|AAO72620.1| putative U2 snRNP auxiliary factor [Oryza sativa (japonica cultivar-group)] |
| Match: gi|35493811|ref|NP_909122.1| |
score: 63.54 |
e-value: 3e-09 |
Identity: 39.73% |
Span: 219bp (30.9%) |
Frame: 3 |
| gi|35493811|ref|NP_909122.1| RNA-binding region containing protein 2 isoform a; splicing factor CC1.3; coactivator of... |
| Match: gi|18875412|ref|NP_573505.1| |
score: 63.54 |
e-value: 3e-09 |
Identity: 39.73% |
Span: 219bp (30.9%) |
Frame: 3 |
| gi|18875412|ref|NP_573505.1| RNA-binding region containing protein 2; coactivator of activating protein-1 and estroge... |
| Match: gi|33864553|ref|NP_896112.1| |
score: 63.54 |
e-value: 3e-09 |
Identity: 34.41% |
Span: 279bp (39.4%) |
Frame: 3 |
| gi|33864553|ref|NP_896112.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus sp. WH 8102] gi|33632076... |
| Match: gi|35493822|ref|NP_909129.1| |
score: 63.54 |
e-value: 3e-09 |
Identity: 39.73% |
Span: 219bp (30.9%) |
Frame: 3 |
| gi|35493822|ref|NP_909129.1| RNA-binding region containing protein 2 isoform d; splicing factor CC1.3; coactivator of... |
| Match: gi|99565|pir||S15348 |
score: 63.54 |
e-value: 3e-09 |
Identity: 41.03% |
Span: 234bp (33.0%) |
Frame: 3 |
| gi|99565|pir||S15348 RNA-binding protein, 28K - spinach |
| Match: gi|34365067|emb|CAE45890.1| |
score: 63.54 |
e-value: 3e-09 |
Identity: 39.73% |
Span: 219bp (30.9%) |
Frame: 3 |
| gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens] |
| Match: gi|31873732|emb|CAD97833.1| |
score: 63.54 |
e-value: 3e-09 |
Identity: 39.73% |
Span: 219bp (30.9%) |
Frame: 3 |
| gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens] |
| Match: gi|35493817|ref|NP_909125.1| |
score: 63.54 |
e-value: 3e-09 |
Identity: 39.73% |
Span: 219bp (30.9%) |
Frame: 3 |
| gi|35493817|ref|NP_909125.1| RNA-binding region containing protein 2 isoform c; splicing factor CC1.3; coactivator of... |
| Match: gi|38109806|gb|EAA55617.1| |
score: 63.54 |
e-value: 3e-09 |
Identity: 34.95% |
Span: 309bp (43.6%) |
Frame: 3 |
| gi|38109806|gb|EAA55617.1| hypothetical protein MG01268.4 [Magnaporthe grisea 70-15] |
| Match: gi|4757926|ref|NP_004893.1| |
score: 63.54 |
e-value: 3e-09 |
Identity: 39.73% |
Span: 219bp (30.9%) |
Frame: 3 |
| gi|4757926|ref|NP_004893.1| RNA-binding region containing protein 2 isoform b; splicing factor CC1.3; coactivator of ... |
| Match: gi|34860256|ref|XP_342558.1| |
score: 63.54 |
e-value: 3e-09 |
Identity: 39.73% |
Span: 219bp (30.9%) |
Frame: 3 |
| gi|34860256|ref|XP_342558.1| similar to RNA-binding region (RNP1, RRM) containing 2; splicing factor (CC1.3); coactiv... |
| Match: gi|21309|emb|CAA41023.1| |
score: 63.54 |
e-value: 3e-09 |
Identity: 41.03% |
Span: 234bp (33.0%) |
Frame: 3 |
| 28kD RNA binding protein [Spinacia oleracea] |
| Match: gi|17432522|gb|AAL39067.1| |
score: 63.16 |
e-value: 4e-09 |
Identity: 29.91% |
Span: 339bp (47.8%) |
Frame: 3 |
| gi|17432522|gb|AAL39067.1| single-stranded DNA binding protein precursor [Solanum tuberosum] |
| Match: gi|32420169|ref|XP_330528.1| |
score: 63.16 |
e-value: 4e-09 |
Identity: 34.29% |
Span: 315bp (44.4%) |
Frame: 3 |
| gi|32420169|ref|XP_330528.1| hypothetical protein [Neurospora crassa] gi|28925605|gb|EAA34626.1| hypothetical protein... |
| Match: gi|33146923|dbj|BAC79944.1| |
score: 63.16 |
e-value: 4e-09 |
Identity: 30.85% |
Span: 282bp (39.8%) |
Frame: 3 |
| gi|33146923|dbj|BAC79944.1| glycine-rich RNA-binding protein-like [Oryza sativa (japonica cultivar-group)] |
| Match: gi|33862287|ref|NP_893847.1| |
score: 63.16 |
e-value: 4e-09 |
Identity: 36.56% |
Span: 279bp (39.4%) |
Frame: 3 |
| gi|33862287|ref|NP_893847.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus marinus str. MIT 9313]... |
| Match: gi|37522099|ref|NP_925476.1| |
score: 63.16 |
e-value: 4e-09 |
Identity: 37.63% |
Span: 279bp (39.4%) |
Frame: 3 |
| gi|37522099|ref|NP_925476.1| RNA-binding protein [Gloeobacter violaceus] gi|35213098|dbj|BAC90471.1| RNA-binding prot... |
| Match: gi|15221187|ref|NP_177563.1| |
score: 63.16 |
e-value: 4e-09 |
Identity: 33.64% |
Span: 330bp (46.5%) |
Frame: 3 |
| GR-RBP5 (glycine-rich RNA-binding protein 5); ATP binding / RNA binding [Arabidopsis thaliana] >gi12324900|gb|AAG5240... |
| Match: gi|15611833|ref|NP_223484.1| |
score: 62.77 |
e-value: 5.2e-09 |
Identity: 39.02% |
Span: 246bp (34.7%) |
Frame: 3 |
| gi|15611833|ref|NP_223484.1| putative [Helicobacter pylori J99] gi|7464827|pir||F71890 hypothetical protein jhp0766 -... |
| Match: gi|133248|sp|P19683|ROC4_NICSY |
score: 58.54 |
e-value: 9.8e-08 |
Identity: 29.17% |
Span: 360bp (50.8%) |
Frame: 3 |
| gi|133248|sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor gi|100295|pir||S22548 ribonucleoprotei... |
| Match: gi|12230584|sp|Q08935|ROC1_NICSY |
score: 58.15 |
e-value: 1.3e-07 |
Identity: 35.06% |
Span: 231bp (32.6%) |
Frame: 3 |
| gi|12230584|sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) gi|100293|pir||S20069 ribo... |
| Match: gi|21309|emb|CAA41023.1| |
score: 57.38 |
e-value: 2.2e-07 |
Identity: 34.48% |
Span: 261bp (36.8%) |
Frame: 3 |
| 28kD RNA binding protein [Spinacia oleracea] |
| Match: gi|99565|pir||S15348 |
score: 57.38 |
e-value: 2.2e-07 |
Identity: 34.48% |
Span: 261bp (36.8%) |
Frame: 3 |
| gi|99565|pir||S15348 RNA-binding protein, 28K - spinach |
| Match: gi|133247|sp|P28644|ROC1_SPIOL |
score: 57.38 |
e-value: 2.2e-07 |
Identity: 34.48% |
Span: 261bp (36.8%) |
Frame: 3 |
| gi|133247|sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast (28RNP) |
| Match: gi|133246|sp|P19682|ROC3_NICSY |
score: 56.61 |
e-value: 3.7e-07 |
Identity: 35% |
Span: 240bp (33.9%) |
Frame: 3 |
| gi|133246|sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) gi|100388|pir||S12109 ribonucl... |
| Match: gi|17432522|gb|AAL39067.1| |
score: 56.61 |
e-value: 3.7e-07 |
Identity: 33.77% |
Span: 231bp (32.6%) |
Frame: 3 |
| gi|17432522|gb|AAL39067.1| single-stranded DNA binding protein precursor [Solanum tuberosum] |
| Match: gi|38109806|gb|EAA55617.1| |
score: 55.07 |
e-value: 1.1e-06 |
Identity: 31.82% |
Span: 264bp (37.2%) |
Frame: 3 |
| gi|38109806|gb|EAA55617.1| hypothetical protein MG01268.4 [Magnaporthe grisea 70-15] |
| Match: gi|18411454|ref|NP_567192.1| |
score: 50.83 |
e-value: 2e-05 |
Identity: 32.1% |
Span: 243bp (34.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi79324963|ref|NP_001031566.1| RNA recognition... |
| Match: gi|32420169|ref|XP_330528.1| |
score: 48.14 |
e-value: 0.00013 |
Identity: 30.77% |
Span: 234bp (33.0%) |
Frame: 3 |
| gi|32420169|ref|XP_330528.1| hypothetical protein [Neurospora crassa] gi|28925605|gb|EAA34626.1| hypothetical protein... |
| Match: gi|18411454|ref|NP_567192.1| |
score: 45.05 |
e-value: 0.001 |
Identity: 27% |
Span: 288bp (40.6%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi79324963|ref|NP_001031566.1| RNA recognition... |
| Match: gi|38099110|gb|EAA46497.1| |
score: 39.66 |
e-value: 0.047 |
Identity: 34.92% |
Span: 189bp (26.7%) |
Frame: 3 |
| gi|38099110|gb|EAA46497.1| hypothetical protein MG08840.4 [Magnaporthe grisea 70-15] |
|
| 212 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 100 hits recorded |
| Match: At1g71800.1 |
score: 202.6 |
e-value: 1.5e-52 |
Identity: 69.36% |
Span: 495bp (69.8%) |
Frame: 3 |
| At1g71800.1 68408.m07614 cleavage stimulation factor, putative similar to cleavage stimulation factor 64 kilodalton s... |
| Match: At3g23830.2 |
score: 65.08 |
e-value: 3.7e-11 |
Identity: 32.98% |
Span: 282bp (39.8%) |
Frame: 3 |
| At3g23830.2 68410.m06795 RNA-binding protein, putative similar to glycine-rich RNA binding protein 2 (AtGRP2) GB:CAA0... |
| Match: At3g23830.1 |
score: 65.08 |
e-value: 3.7e-11 |
Identity: 32.98% |
Span: 282bp (39.8%) |
Frame: 3 |
| At3g23830.1 68410.m06794 RNA-binding protein, putative similar to glycine-rich RNA binding protein 2 (AtGRP2) GB:CAA0... |
| Match: At5g61030.1 |
score: 65.08 |
e-value: 3.7e-11 |
Identity: 32.73% |
Span: 330bp (46.5%) |
Frame: 3 |
| At5g61030.1 68412.m06929 RNA-binding protein, putative similar to RNA-binding protein from [Solanum tuberosum] GI:158... |
| Match: At4g00830.1 |
score: 64.31 |
e-value: 6.3e-11 |
Identity: 36.84% |
Span: 228bp (32.2%) |
Frame: 3 |
| At4g00830.1 68411.m00105 RNA recognition motif (RRM) - containing protein similar to nucleolin protein; contains Inte... |
| Match: At3g47120.1 |
score: 64.31 |
e-value: 6.3e-11 |
Identity: 35.63% |
Span: 261bp (36.8%) |
Frame: 3 |
| At3g47120.1 68410.m04743 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At1g74230.1 |
score: 63.16 |
e-value: 1.4e-10 |
Identity: 33.64% |
Span: 330bp (46.5%) |
Frame: 3 |
| At1g74230.1 68408.m07893 glycine-rich RNA-binding protein similar to RNA-binding protein GB:S46286 from [Nicotiana sy... |
| Match: At4g24770.1 |
score: 62.39 |
e-value: 2.4e-10 |
Identity: 39.74% |
Span: 234bp (33.0%) |
Frame: 3 |
| At4g24770.1 68411.m03231 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At3g52150.1 |
score: 62 |
e-value: 3.1e-10 |
Identity: 28.57% |
Span: 378bp (53.3%) |
Frame: 3 |
| At3g52150.1 68410.m05303 RNA recognition motif (RRM) - containing protein similar to chloroplast RNA-binding protein ... |
| Match: At2g37220.1 |
score: 62 |
e-value: 3.1e-10 |
Identity: 29.55% |
Span: 360bp (50.8%) |
Frame: 3 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At1g60000.1 |
score: 61.62 |
e-value: 4.1e-10 |
Identity: 37.5% |
Span: 240bp (33.9%) |
Frame: 3 |
| At1g60000.1 68408.m06195 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to 29 kDa... |
| Match: At3g52380.1 |
score: 61.23 |
e-value: 5.3e-10 |
Identity: 33.71% |
Span: 267bp (37.7%) |
Frame: 3 |
| At3g52380.1 68410.m05334 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to chloro... |
| Match: At1g60900.1 |
score: 61.23 |
e-value: 5.3e-10 |
Identity: 41.1% |
Span: 219bp (30.9%) |
Frame: 3 |
| At1g60900.1 68408.m06287 splicing factor U2AF 65 kDa subunit, putative similar to U2 snRNP auxiliary factor, large su... |
| Match: At1g55310.1 |
score: 60.85 |
e-value: 6.9e-10 |
Identity: 35.48% |
Span: 270bp (38.1%) |
Frame: 3 |
| At1g55310.1 68408.m05793 arginine/serine-rich protein |
| Match: At5g50250.1 |
score: 59.69 |
e-value: 1.5e-09 |
Identity: 35.9% |
Span: 234bp (33.0%) |
Frame: 3 |
| At5g50250.1 68412.m05614 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At4g13850.1 |
score: 59.69 |
e-value: 1.5e-09 |
Identity: 30.85% |
Span: 282bp (39.8%) |
Frame: 3 |
| At4g13850.1 68411.m05250 glycine-rich RNA-binding protein (AtGRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabido... |
| Match: At2g37220.1 |
score: 59.31 |
e-value: 2e-09 |
Identity: 35.06% |
Span: 231bp (32.6%) |
Frame: 3 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At4g13850.2 |
score: 58.92 |
e-value: 2.6e-09 |
Identity: 30.77% |
Span: 273bp (38.5%) |
Frame: 3 |
| At4g13850.2 68411.m05251 glycine-rich RNA-binding protein (AtGRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabido... |
| Match: At3g13570.1 |
score: 58.54 |
e-value: 3.4e-09 |
Identity: 34.07% |
Span: 264bp (37.2%) |
Frame: 3 |
| At3g13570.1 68410.m01531 arginine/serine-rich splicing factor SCL30a almost identical to SC35-like splicing factor SC... |
| Match: At2g21660.1 |
score: 57.77 |
e-value: 5.9e-09 |
Identity: 29.13% |
Span: 309bp (43.6%) |
Frame: 3 |
| At2g21660.1 68409.m05724 glycine-rich RNA-binding protein (AtGRP7) SP|Q03250 Glycine-rich RNA-binding protein 7 {Arab... |
| Match: At4g36690.2 |
score: 57.38 |
e-value: 7.7e-09 |
Identity: 50% |
Span: 150bp (21.2%) |
Frame: 3 |
| At4g36690.2 68411.m04734 splicing factor U2AF 65 kDa subunit, putative U2 auxiliary factor 65 kDa subunit, U2 snRNP a... |
| Match: At4g19610.1 |
score: 57.38 |
e-value: 7.7e-09 |
Identity: 36.9% |
Span: 252bp (35.5%) |
Frame: 3 |
| At4g19610.1 68411.m02630 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At2g46780.1 |
score: 57.38 |
e-value: 7.7e-09 |
Identity: 31.33% |
Span: 249bp (35.1%) |
Frame: 3 |
| At2g46780.1 68409.m05273 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At4g36690.1 |
score: 57.38 |
e-value: 7.7e-09 |
Identity: 50% |
Span: 150bp (21.2%) |
Frame: 3 |
| At4g36690.1 68411.m04733 splicing factor U2AF 65 kDa subunit, putative U2 auxiliary factor 65 kDa subunit, U2 snRNP a... |
| Match: At3g50670.1 |
score: 57 |
e-value: 1e-08 |
Identity: 31.09% |
Span: 357bp (50.4%) |
Frame: 3 |
| At3g50670.1 68410.m05135 U1 small nuclear ribonucleoprotein 70 (U1-70k) |
| Match: At4g39260.2 |
score: 57 |
e-value: 1e-08 |
Identity: 28.72% |
Span: 282bp (39.8%) |
Frame: 3 |
| At4g39260.2 68411.m05437 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At4g39260.1 |
score: 57 |
e-value: 1e-08 |
Identity: 28.72% |
Span: 282bp (39.8%) |
Frame: 3 |
| At4g39260.1 68411.m05436 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At2g18510.1 |
score: 56.61 |
e-value: 1.3e-08 |
Identity: 34.88% |
Span: 258bp (36.4%) |
Frame: 3 |
| At2g18510.1 68409.m01948 pre-mRNA splicing factor SF3b, putative |
| Match: At4g24770.1 |
score: 56.61 |
e-value: 1.3e-08 |
Identity: 32.5% |
Span: 240bp (33.9%) |
Frame: 3 |
| At4g24770.1 68411.m03231 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At3g08000.1 |
score: 56.61 |
e-value: 1.3e-08 |
Identity: 30.61% |
Span: 294bp (41.5%) |
Frame: 3 |
| At3g08000.1 68410.m00882 RNA-binding protein, putative similar to RNA-binding protein from [Nicotiana tabacum] GI:158... |
| Match: At1g22330.1 |
score: 56.22 |
e-value: 1.7e-08 |
Identity: 29.27% |
Span: 360bp (50.8%) |
Frame: 3 |
| At1g22330.1 68408.m02526 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At4g14300.1 |
score: 56.22 |
e-value: 1.7e-08 |
Identity: 31% |
Span: 294bp (41.5%) |
Frame: 3 |
| At4g14300.1 68411.m01996 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At1g02840.2 |
score: 55.84 |
e-value: 2.2e-08 |
Identity: 35.35% |
Span: 294bp (41.5%) |
Frame: 3 |
| At1g02840.2 68408.m08867 pre-mRNA splicing factor SF2 (SR1 protein) |
| Match: At5g50250.1 |
score: 55.84 |
e-value: 2.2e-08 |
Identity: 31.65% |
Span: 237bp (33.4%) |
Frame: 3 |
| At5g50250.1 68412.m05614 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At1g02840.1 |
score: 55.84 |
e-value: 2.2e-08 |
Identity: 35.35% |
Span: 294bp (41.5%) |
Frame: 3 |
| At1g02840.1 68408.m08866 pre-mRNA splicing factor SF2 (SR1 protein) |
| Match: At1g02840.3 |
score: 55.84 |
e-value: 2.2e-08 |
Identity: 35.35% |
Span: 294bp (41.5%) |
Frame: 3 |
| At1g02840.3 68408.m08868 pre-mRNA splicing factor SF2 (SR1 protein) |
| Match: At5g09880.1 |
score: 55.84 |
e-value: 2.2e-08 |
Identity: 40% |
Span: 222bp (31.3%) |
Frame: 3 |
| At5g09880.1 68412.m01056 RRM-containing protein |
| Match: At2g23350.1 |
score: 55.45 |
e-value: 2.9e-08 |
Identity: 30.95% |
Span: 252bp (35.5%) |
Frame: 3 |
| At2g23350.1 68409.m02523 polyadenylate-binding protein (PABP), putative |
| Match: At3g13224.2 |
score: 55.45 |
e-value: 2.9e-08 |
Identity: 27.56% |
Span: 378bp (53.3%) |
Frame: 3 |
| At3g13224.2 68410.m01486 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At1g60650.2 |
score: 55.45 |
e-value: 2.9e-08 |
Identity: 29.87% |
Span: 231bp (32.6%) |
Frame: 3 |
| At1g60650.2 68408.m08724 glycine-rich RNA-binding protein, putative similar to RNA binding protein(RZ-1) GI:1435061 f... |
| Match: At1g60650.1 |
score: 55.45 |
e-value: 2.9e-08 |
Identity: 29.87% |
Span: 231bp (32.6%) |
Frame: 3 |
| At1g60650.1 68408.m08723 glycine-rich RNA-binding protein, putative similar to RNA binding protein(RZ-1) GI:1435061 f... |
| Match: At2g21660.2 |
score: 55.07 |
e-value: 3.8e-08 |
Identity: 28.16% |
Span: 309bp (43.6%) |
Frame: 3 |
| At2g21660.2 68409.m05725 glycine-rich RNA-binding protein (AtGRP7) SP|Q03250 Glycine-rich RNA-binding protein 7 {Arab... |
| Match: At4g39260.3 |
score: 55.07 |
e-value: 3.8e-08 |
Identity: 28.72% |
Span: 282bp (39.8%) |
Frame: 3 |
| At4g39260.3 68411.m05438 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At5g40490.1 |
score: 55.07 |
e-value: 3.8e-08 |
Identity: 25% |
Span: 369bp (52.0%) |
Frame: 3 |
| At5g40490.1 68412.m04421 RNA recognition motif (RRM) - containing protein ribonucleoprotein, Xenopus laevis, PIR:S407... |
| Match: At2g16260.1 |
score: 54.68 |
e-value: 5e-08 |
Identity: 30.53% |
Span: 282bp (39.8%) |
Frame: 3 |
| At2g16260.1 68409.m01674 glycine-rich RNA-binding protein, putative similar to Glycine-rich RNA-binding protein from ... |
| Match: At5g18810.1 |
score: 54.68 |
e-value: 5e-08 |
Identity: 29.03% |
Span: 279bp (39.4%) |
Frame: 3 |
| At5g18810.1 68412.m02049 SC35-like splicing factor SCL28 nearly identical to SC35-like splicing factor SCL28, 28 kD [... |
| Match: At4g02430.1 |
score: 54.68 |
e-value: 5e-08 |
Identity: 31% |
Span: 300bp (42.3%) |
Frame: 3 |
| At4g02430.1 68411.m00300 arginine/serine-rich splicing factor (atSRp34), putative cDNA NCBI_gi:15810292 supports a tr... |
| Match: At4g02430.2 |
score: 54.68 |
e-value: 5e-08 |
Identity: 31% |
Span: 300bp (42.3%) |
Frame: 3 |
| At4g02430.2 68411.m00301 arginine/serine-rich splicing factor (atSRp34), putative cDNA NCBI_gi:15810292 supports a tr... |
| Match: At3g53460.1 |
score: 54.3 |
e-value: 6.5e-08 |
Identity: 32.47% |
Span: 231bp (32.6%) |
Frame: 3 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At2g22100.1 |
score: 54.3 |
e-value: 6.5e-08 |
Identity: 32.53% |
Span: 249bp (35.1%) |
Frame: 3 |
| At2g22100.1 68409.m02379 RRM-containing RNA-binding protein |
| Match: At3g53460.2 |
score: 54.3 |
e-value: 6.5e-08 |
Identity: 32.47% |
Span: 231bp (32.6%) |
Frame: 3 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At2g43370.1 |
score: 53.91 |
e-value: 8.5e-08 |
Identity: 35.14% |
Span: 222bp (31.3%) |
Frame: 3 |
| At2g43370.1 68409.m04872 U1 small nuclear ribonucleoprotein 70 kDa, putative |
| Match: At3g53460.1 |
score: 53.53 |
e-value: 1.1e-07 |
Identity: 30.21% |
Span: 282bp (39.8%) |
Frame: 3 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At3g53460.2 |
score: 53.53 |
e-value: 1.1e-07 |
Identity: 30.21% |
Span: 282bp (39.8%) |
Frame: 3 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At3g52660.1 |
score: 53.14 |
e-value: 1.4e-07 |
Identity: 32.39% |
Span: 213bp (30.0%) |
Frame: 3 |
| At3g52660.1 68410.m05372 RNA recognition motif (RRM) - containing protein heterogeneous nuclear ribonucleoprotein R, ... |
| Match: At2g22090.2 |
score: 52.76 |
e-value: 1.9e-07 |
Identity: 34.67% |
Span: 225bp (31.7%) |
Frame: 3 |
| At2g22090.2 68409.m02378 UBP1 interacting protein, putative similar to UBP1 interacting protein 1a [Arabidopsis thali... |
| Match: At2g22090.1 |
score: 52.76 |
e-value: 1.9e-07 |
Identity: 34.67% |
Span: 225bp (31.7%) |
Frame: 3 |
| At2g22090.1 68409.m02377 UBP1 interacting protein, putative similar to UBP1 interacting protein 1a [Arabidopsis thali... |
| Match: At2g19380.1 |
score: 52.76 |
e-value: 1.9e-07 |
Identity: 29.41% |
Span: 357bp (50.4%) |
Frame: 3 |
| At2g19380.1 68409.m02052 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At3g26420.1 |
score: 52.76 |
e-value: 1.9e-07 |
Identity: 25.49% |
Span: 285bp (40.2%) |
Frame: 3 |
| At3g26420.1 68410.m03017 glycine-rich RNA-binding protein similar to RNA-binding protein (RZ-1) GB:BAA12064 [Nicotian... |
| Match: At1g49760.1 |
score: 52.76 |
e-value: 1.9e-07 |
Identity: 29.81% |
Span: 303bp (42.7%) |
Frame: 3 |
| At1g49760.1 68408.m05111 polyadenylate-binding protein (PABP), putative similar to poly(A)-binding protein GB:AAF6682... |
| Match: At1g73530.1 |
score: 52.76 |
e-value: 1.9e-07 |
Identity: 26.09% |
Span: 276bp (38.9%) |
Frame: 3 |
| At1g73530.1 68408.m07810 RNA recognition motif (RRM) - containing protein low similarity to SP|Q03251 Glycine-rich RN... |
| Match: At1g78260.1 |
score: 52.37 |
e-value: 2.5e-07 |
Identity: 28.23% |
Span: 372bp (52.5%) |
Frame: 3 |
| At1g78260.1 68408.m08366 RNA recognition motif (RRM) - containing protein similar to RNA recognition motif-containing... |
| Match: At5g06210.1 |
score: 52.37 |
e-value: 2.5e-07 |
Identity: 29.21% |
Span: 255bp (36.0%) |
Frame: 3 |
| At5g06210.1 68412.m00645 RNA-binding protein, putative contains similarity to RNA-binding protein from [Nicotiana tab... |
| Match: At3g20930.1 |
score: 51.6 |
e-value: 4.2e-07 |
Identity: 32.58% |
Span: 267bp (37.7%) |
Frame: 3 |
| At3g20930.1 68410.m02397 RNA recognition motif (RRM) - containing protein contains Pfam profile: PF00076 RNA recognit... |
| Match: At3g52660.1 |
score: 51.6 |
e-value: 4.2e-07 |
Identity: 28.87% |
Span: 285bp (40.2%) |
Frame: 3 |
| At3g52660.1 68410.m05372 RNA recognition motif (RRM) - containing protein heterogeneous nuclear ribonucleoprotein R, ... |
| Match: At3g56860.3 |
score: 50.83 |
e-value: 7.2e-07 |
Identity: 32.18% |
Span: 261bp (36.8%) |
Frame: 3 |
| At3g56860.3 68410.m06942 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At4g00830.1 |
score: 50.83 |
e-value: 7.2e-07 |
Identity: 32.1% |
Span: 243bp (34.3%) |
Frame: 3 |
| At4g00830.1 68411.m00105 RNA recognition motif (RRM) - containing protein similar to nucleolin protein; contains Inte... |
| Match: At3g56860.1 |
score: 50.83 |
e-value: 7.2e-07 |
Identity: 32.18% |
Span: 261bp (36.8%) |
Frame: 3 |
| At3g56860.1 68410.m06940 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At3g56860.2 |
score: 50.83 |
e-value: 7.2e-07 |
Identity: 32.18% |
Span: 261bp (36.8%) |
Frame: 3 |
| At3g56860.2 68410.m06941 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At1g76460.1 |
score: 50.45 |
e-value: 9.4e-07 |
Identity: 37.1% |
Span: 186bp (26.2%) |
Frame: 3 |
| At1g76460.1 68408.m08164 RNA recognition motif (RRM) - containing protein low similarity to RRM-containing protein SE... |
| Match: At3g55460.1 |
score: 50.45 |
e-value: 9.4e-07 |
Identity: 32.14% |
Span: 252bp (35.5%) |
Frame: 3 |
| At3g55460.1 68410.m05688 arginine/serine-rich protein SCL30 Serine/arginine-rich protein/putative splicing factor, Ar... |
| Match: At3g15010.1 |
score: 50.45 |
e-value: 9.4e-07 |
Identity: 31.76% |
Span: 255bp (36.0%) |
Frame: 3 |
| At3g15010.1 68410.m01704 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At3g07810.1 |
score: 50.06 |
e-value: 1.2e-06 |
Identity: 25% |
Span: 333bp (47.0%) |
Frame: 3 |
| At3g07810.1 68410.m00862 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At3g07810.2 |
score: 50.06 |
e-value: 1.2e-06 |
Identity: 25% |
Span: 333bp (47.0%) |
Frame: 3 |
| At3g07810.2 68410.m00863 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At5g53680.1 |
score: 50.06 |
e-value: 1.2e-06 |
Identity: 27.1% |
Span: 321bp (45.3%) |
Frame: 3 |
| At5g53680.1 68412.m06033 RNA recognition motif (RRM) - containing protein low similarity to RRM-containing protein SE... |
| Match: At3g49430.1 |
score: 49.68 |
e-value: 1.6e-06 |
Identity: 32.65% |
Span: 285bp (40.2%) |
Frame: 3 |
| At3g49430.1 68410.m05002 arginine/serine-rich splicing factor (atSRp34), putative NULL |
| Match: At3g46020.1 |
score: 49.68 |
e-value: 1.6e-06 |
Identity: 31.17% |
Span: 231bp (32.6%) |
Frame: 3 |
| At3g46020.1 68410.m04612 RNA-binding protein, putative similar to Cold-inducible RNA-binding protein (Glycine-rich RN... |
| Match: At5g65260.1 |
score: 49.68 |
e-value: 1.6e-06 |
Identity: 37.84% |
Span: 222bp (31.3%) |
Frame: 3 |
| At5g65260.1 68412.m07424 RNA recognition motif (RRM) - containing protein low similarity to poly(A)-binding protein I... |
| Match: At2g33410.1 |
score: 49.68 |
e-value: 1.6e-06 |
Identity: 28.1% |
Span: 318bp (44.9%) |
Frame: 3 |
| At2g33410.1 68409.m03704 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At1g17640.1 |
score: 49.29 |
e-value: 2.1e-06 |
Identity: 23.53% |
Span: 330bp (46.5%) |
Frame: 3 |
| At1g17640.1 68408.m01971 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g52380.1 |
score: 48.91 |
e-value: 2.7e-06 |
Identity: 27.17% |
Span: 267bp (37.7%) |
Frame: 3 |
| At3g52380.1 68410.m05334 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to chloro... |
| Match: At1g60000.1 |
score: 46.59 |
e-value: 1.4e-05 |
Identity: 25.44% |
Span: 342bp (48.2%) |
Frame: 3 |
| At1g60000.1 68408.m06195 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to 29 kDa... |
| Match: At3g07810.2 |
score: 45.82 |
e-value: 2.3e-05 |
Identity: 31.08% |
Span: 222bp (31.3%) |
Frame: 3 |
| At3g07810.2 68410.m00863 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At3g07810.1 |
score: 45.82 |
e-value: 2.3e-05 |
Identity: 31.08% |
Span: 222bp (31.3%) |
Frame: 3 |
| At3g07810.1 68410.m00862 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At4g14300.1 |
score: 45.05 |
e-value: 3.9e-05 |
Identity: 27.19% |
Span: 342bp (48.2%) |
Frame: 3 |
| At4g14300.1 68411.m01996 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At4g00830.1 |
score: 45.05 |
e-value: 3.9e-05 |
Identity: 27% |
Span: 288bp (40.6%) |
Frame: 3 |
| At4g00830.1 68411.m00105 RNA recognition motif (RRM) - containing protein similar to nucleolin protein; contains Inte... |
| Match: At5g09880.1 |
score: 43.9 |
e-value: 8.8e-05 |
Identity: 26.32% |
Span: 342bp (48.2%) |
Frame: 3 |
| At5g09880.1 68412.m01056 RRM-containing protein |
| Match: At3g15010.1 |
score: 43.9 |
e-value: 8.8e-05 |
Identity: 29.7% |
Span: 303bp (42.7%) |
Frame: 3 |
| At3g15010.1 68410.m01704 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At2g33410.1 |
score: 43.9 |
e-value: 8.8e-05 |
Identity: 27.18% |
Span: 309bp (43.6%) |
Frame: 3 |
| At2g33410.1 68409.m03704 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At3g52150.1 |
score: 43.51 |
e-value: 0.00011 |
Identity: 32.89% |
Span: 228bp (32.2%) |
Frame: 3 |
| At3g52150.1 68410.m05303 RNA recognition motif (RRM) - containing protein similar to chloroplast RNA-binding protein ... |
| Match: At2g18510.1 |
score: 43.13 |
e-value: 0.00015 |
Identity: 27.91% |
Span: 252bp (35.5%) |
Frame: 3 |
| At2g18510.1 68409.m01948 pre-mRNA splicing factor SF3b, putative |
| Match: At4g19610.1 |
score: 42.74 |
e-value: 0.0002 |
Identity: 30.21% |
Span: 261bp (36.8%) |
Frame: 3 |
| At4g19610.1 68411.m02630 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At1g49760.1 |
score: 41.59 |
e-value: 0.00043 |
Identity: 29.17% |
Span: 216bp (30.5%) |
Frame: 3 |
| At1g49760.1 68408.m05111 polyadenylate-binding protein (PABP), putative similar to poly(A)-binding protein GB:AAF6682... |
| Match: At1g17640.1 |
score: 41.2 |
e-value: 0.00057 |
Identity: 30.65% |
Span: 186bp (26.2%) |
Frame: 3 |
| At1g17640.1 68408.m01971 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g56860.3 |
score: 40.82 |
e-value: 0.00074 |
Identity: 27.69% |
Span: 195bp (27.5%) |
Frame: 3 |
| At3g56860.3 68410.m06942 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At3g56860.2 |
score: 40.82 |
e-value: 0.00074 |
Identity: 27.69% |
Span: 195bp (27.5%) |
Frame: 3 |
| At3g56860.2 68410.m06941 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At3g56860.1 |
score: 40.82 |
e-value: 0.00074 |
Identity: 27.69% |
Span: 195bp (27.5%) |
Frame: 3 |
| At3g56860.1 68410.m06940 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At5g40490.1 |
score: 38.51 |
e-value: 0.004 |
Identity: 28% |
Span: 150bp (21.2%) |
Frame: 3 |
| At5g40490.1 68412.m04421 RNA recognition motif (RRM) - containing protein ribonucleoprotein, Xenopus laevis, PIR:S407... |
| Match: At3g13224.2 |
score: 36.58 |
e-value: 0.014 |
Identity: 23.29% |
Span: 219bp (30.9%) |
Frame: 3 |
| At3g13224.2 68410.m01486 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g52660.1 |
score: 35.04 |
e-value: 0.041 |
Identity: 22.83% |
Span: 261bp (36.8%) |
Frame: 3 |
| At3g52660.1 68410.m05372 RNA recognition motif (RRM) - containing protein heterogeneous nuclear ribonucleoprotein R, ... |
|
| 125 lower scoring hits censored -- only 100 best hits are stored. |
