| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|270242124|emb|CBI29337.1| |
score: 221 |
e-value: 4e-56 |
Identity: 74.71% |
Span: 486bp (68.5%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225463129|ref|XP_002264617.1| |
score: 221 |
e-value: 4e-56 |
Identity: 74.71% |
Span: 486bp (68.5%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|255572355|ref|XP_002527116.1| |
score: 211 |
e-value: 6e-53 |
Identity: 72.35% |
Span: 486bp (68.5%) |
Frame: 1 |
| mRNA splicing factor, putative [Ricinus communis] >gi223533539|gb|EEF35279.1| mRNA splicing factor, putative [Ricinus... |
| Match: gi|226528788|ref|NP_001140273.1| |
score: 202 |
e-value: 3e-50 |
Identity: 79.03% |
Span: 372bp (52.5%) |
Frame: 1 |
| hypothetical protein LOC100272317 [Zea mays] >gi194698788|gb|ACF83478.1| unknown [Zea mays] |
| Match: gi|218185350|gb|EEC67777.1| |
score: 200 |
e-value: 1e-49 |
Identity: 76.56% |
Span: 384bp (54.2%) |
Frame: 1 |
| hypothetical protein OsI_35315 [Oryza sativa Indica Group] |
| Match: gi|115484443|ref|NP_001065883.1| |
score: 200 |
e-value: 1e-49 |
Identity: 76.56% |
Span: 384bp (54.2%) |
Frame: 1 |
| Os11g0176100 [Oryza sativa (japonica cultivar-group)] >gi62733690|gb|AAX95801.1| RNA recognition motif. (a.k.a. RRM, ... |
| Match: gi|21591633|gb|AAM64164.1|AF515695_1 |
score: 199 |
e-value: 2e-49 |
Identity: 68.79% |
Span: 495bp (69.8%) |
Frame: 1 |
| cleavage stimulation factor 64 [Arabidopsis thaliana] |
| Match: gi|22330574|ref|NP_177325.2| |
score: 199 |
e-value: 2e-49 |
Identity: 69.36% |
Span: 495bp (69.8%) |
Frame: 1 |
| cleavage stimulation factor, putative [Arabidopsis thaliana] >gi7239507|gb|AAF43233.1|AC012654_17 Contains similarity... |
| Match: gi|259489992|ref|NP_001159130.1| |
score: 199 |
e-value: 2e-49 |
Identity: 75.78% |
Span: 384bp (54.2%) |
Frame: 1 |
| hypothetical protein LOC100304208 [Zea mays] >gi223942157|gb|ACN25162.1| unknown [Zea mays] |
| Match: gi|242067641|ref|XP_002449097.1| |
score: 169 |
e-value: 2e-40 |
Identity: 85.42% |
Span: 288bp (40.6%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_05g004860 [Sorghum bicolor] >gi241934940|gb|EES08085.1| hypothetical protein SORBIDRA... |
| Match: gi|195649947|gb|ACG44441.1| |
score: 168 |
e-value: 5e-40 |
Identity: 88.04% |
Span: 276bp (38.9%) |
Frame: 1 |
| hypothetical protein [Zea mays] |
| Match: gi|224066585|ref|XP_002302149.1| |
score: 147 |
e-value: 1e-33 |
Identity: 67.16% |
Span: 378bp (53.3%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222843875|gb|EEE81422.1| predicted protein [Populus trichocarpa] |
| Match: gi|168013166|ref|XP_001759272.1| |
score: 139 |
e-value: 2e-31 |
Identity: 89.04% |
Span: 219bp (30.9%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162689585|gb|EDQ75956.1| predicted protein [Physcomitrella... |
| Match: gi|291228918|ref|XP_002734426.1| |
score: 138 |
e-value: 6e-31 |
Identity: 67.33% |
Span: 303bp (42.7%) |
Frame: 1 |
| PREDICTED: cleavage stimulation factor subunit 2-like [Saccoglossus kowalevskii] |
| Match: gi|260790683|ref|XP_002590371.1| |
score: 137 |
e-value: 1e-30 |
Identity: 58.82% |
Span: 357bp (50.4%) |
Frame: 1 |
| hypothetical protein BRAFLDRAFT_216236 [Branchiostoma floridae] >gi229275563|gb|EEN46382.1| hypothetical protein BRAF... |
| Match: gi|241997552|ref|XP_002433425.1| |
score: 136 |
e-value: 2e-30 |
Identity: 62.86% |
Span: 309bp (43.6%) |
Frame: 1 |
| RNA recognition motif-containing protein [Ixodes scapularis] >gi215490848|gb|EEC00489.1| RNA recognition motif-contai... |
| Match: gi|224097289|ref|XP_002191180.1| |
score: 130 |
e-value: 2e-28 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 1 |
| PREDICTED: cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Taeniopygia guttata] |
| Match: gi|196115100|ref|NP_001124486.1| |
score: 130 |
e-value: 2e-28 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 1 |
| cleavage stimulation factor, 3' pre-RNA subunit 2 [Rattus norvegicus] >gi195539770|gb|AAI68251.1| Cstf2 protein [Ratt... |
| Match: gi|194373969|dbj|BAG62297.1| |
score: 130 |
e-value: 2e-28 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 1 |
| unnamed protein product [Homo sapiens] |
| Match: gi|192764316|gb|ACF05702.1| |
score: 130 |
e-value: 2e-28 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 1 |
| betaCstF-64 variant 1 [Mus musculus] |
| Match: gi|192764312|gb|ACF05700.1| |
score: 130 |
e-value: 2e-28 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 1 |
| betaCstF-64 variant 3 [Mus musculus] |
| Match: gi|192764310|gb|ACF05699.1| |
score: 130 |
e-value: 2e-28 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 1 |
| betaCstF-64 variant 2 [Homo sapiens] |
| Match: gi|194332803|ref|NP_001123707.1| |
score: 130 |
e-value: 2e-28 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 1 |
| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Xenopus (Silurana) tropicalis] >gi189442601|gb|AAI67314.1|... |
| Match: gi|149055454|gb|EDM07038.1| |
score: 130 |
e-value: 2e-28 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 1 |
| rCG38164 [Rattus norvegicus] |
| Match: gi|148688462|gb|EDL20409.1| |
score: 130 |
e-value: 2e-28 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 1 |
| cleavage stimulation factor, 3' pre-RNA subunit 2 [Mus musculus] |
|
| 208 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 7 hits recorded |
| Match: At1G71800.1 |
score: 199 |
e-value: 1e-51 |
Identity: 69.36% |
Span: 495bp (69.8%) |
Frame: 1 |
| cleavage stimulation factor, putative | chr1:27003268-27005512 FORWARD |
| Match: At5G61030.1 |
score: 65.1 |
e-value: 4e-11 |
Identity: 32.73% |
Span: 330bp (46.5%) |
Frame: 1 |
| Symbols: GR-RBP3 | GR-RBP3 (glycine-rich RNA-binding protein 3); RNA binding | chr5:24578096-24579378 FORWARD |
| Match: At3G23830.2 |
score: 65.1 |
e-value: 4e-11 |
Identity: 32.98% |
Span: 282bp (39.8%) |
Frame: 1 |
| Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding | chr3:8606769-8607684 REVERSE |
| Match: At3G23830.1 |
score: 65.1 |
e-value: 4e-11 |
Identity: 32.98% |
Span: 282bp (39.8%) |
Frame: 1 |
| Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA bindin... |
| Match: At4G00830.2 |
score: 64.3 |
e-value: 7e-11 |
Identity: 36.84% |
Span: 228bp (32.2%) |
Frame: 1 |
| RNA binding | chr4:352782-354965 FORWARD |
| Match: At4G00830.1 |
score: 64.3 |
e-value: 7e-11 |
Identity: 36.84% |
Span: 228bp (32.2%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr4:352782-354965 FORWARD |
| Match: At3G47120.1 |
score: 64.3 |
e-value: 7e-11 |
Identity: 35.63% |
Span: 261bp (36.8%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr3:17362319-17363754 REVERSE |
|
| swissprot [blastx] | Showing best 10 hits recorded |
| Match: Q5RDA3 |
score: 130 |
e-value: 1e-29 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 1 |
| Cleavage stimulation factor subunit 2 OS=Pongo abelii GN=CSTF2 PE=2 SV=1 |
| Match: Q8BIQ5 |
score: 130 |
e-value: 1e-29 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 1 |
| Cleavage stimulation factor subunit 2 OS=Mus musculus GN=Cstf2 PE=1 SV=2 |
| Match: P33240 |
score: 130 |
e-value: 1e-29 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 1 |
| Cleavage stimulation factor subunit 2 OS=Homo sapiens GN=CSTF2 PE=1 SV=1 |
| Match: Q8HXM1 |
score: 130 |
e-value: 1e-29 |
Identity: 65.31% |
Span: 294bp (41.5%) |
Frame: 1 |
| Cleavage stimulation factor subunit 2 OS=Bos taurus GN=CSTF2 PE=2 SV=1 |
| Match: Q8C7E9 |
score: 124 |
e-value: 8e-28 |
Identity: 63.27% |
Span: 294bp (41.5%) |
Frame: 1 |
| Cleavage stimulation factor subunit 2 tau variant OS=Mus musculus GN=Cstf2t PE=1 SV=2 |
| Match: Q9H0L4 |
score: 124 |
e-value: 8e-28 |
Identity: 63.27% |
Span: 294bp (41.5%) |
Frame: 1 |
| Cleavage stimulation factor subunit 2 tau variant OS=Homo sapiens GN=CSTF2T PE=1 SV=1 |
| Match: Q9P6P7 |
score: 100 |
e-value: 1e-20 |
Identity: 59.49% |
Span: 237bp (33.4%) |
Frame: 1 |
| Uncharacterized RNA-binding protein C644.16 OS=Schizosaccharomyces pombe GN=SPAC644.16 PE=2 SV=1 |
| Match: O43040 |
score: 93.6 |
e-value: 1e-18 |
Identity: 50% |
Span: 258bp (36.4%) |
Frame: 1 |
| Cleavage and termination factor 1 OS=Schizosaccharomyces pombe GN=ctf1 PE=1 SV=1 |
| Match: P25299 |
score: 85.9 |
e-value: 2e-16 |
Identity: 40.45% |
Span: 267bp (37.7%) |
Frame: 1 |
| mRNA 3'-end-processing protein RNA15 OS=Saccharomyces cerevisiae GN=RNA15 PE=1 SV=1 |
| Match: Q10B98 |
score: 72.4 |
e-value: 3e-12 |
Identity: 42.53% |
Span: 261bp (36.8%) |
Frame: 1 |
| Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica GN=Os03g0826400 PE=2 SV=1 |
|
