| genbank/nr [blastx] | Showing best 30 hits recorded |
| Match: gi|37535668|ref|NP_922136.1| |
score: 83.57 |
e-value: 8.8e-22 |
Identity: 43.86% |
Span: 495bp (69.1%) |
Frame: 1 |
| gi|37535668|ref|NP_922136.1| putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] gi|22128716|gb|AAM... |
| Match: gi|18921324|gb|AAL82529.1| |
score: 60.85 |
e-value: 2.3e-14 |
Identity: 38.1% |
Span: 378bp (52.8%) |
Frame: 1 |
| gi|18921324|gb|AAL82529.1| putative nucleic acid binding protein [Oryza sativa] |
| Match: gi|30685269|ref|NP_851040.1| |
score: 60.46 |
e-value: 3.8e-14 |
Identity: 33.73% |
Span: 492bp (68.7%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi30685276|ref|NP_197031.3| KH domain-containing protein [Arabid... |
| Match: gi|11357886|pir||T49962 |
score: 60.46 |
e-value: 3.8e-14 |
Identity: 33.73% |
Span: 492bp (68.7%) |
Frame: 1 |
| gi|11357886|pir||T49962 hypothetical protein F8M21.160 - Arabidopsis thaliana gi|7671496|emb|CAB89337.1| putative pro... |
| Match: gi|7486302|pir||T04533 |
score: 57.38 |
e-value: 2.2e-07 |
Identity: 36.52% |
Span: 513bp (71.6%) |
Frame: 1 |
| hypothetical protein F28J12.30 - Arabidopsis thaliana >gi2832642|emb|CAA16717.1| putative protein [Arabidopsis thalia... |
| Match: gi|30684386|ref|NP_849406.1| |
score: 50.83 |
e-value: 2.1e-05 |
Identity: 41.94% |
Span: 357bp (49.9%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi24762211|gb|AAN64172.1| putative KH domain protein [Arabidopsi... |
| Match: gi|15236863|ref|NP_193572.1| |
score: 50.83 |
e-value: 2.1e-05 |
Identity: 41.94% |
Span: 357bp (49.9%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-conta... |
| Match: gi|25518414|pir||C86275 |
score: 50.45 |
e-value: 7.8e-10 |
Identity: 33.53% |
Span: 492bp (68.7%) |
Frame: 1 |
| gi|25518414|pir||C86275 hypothetical protein [imported] - Arabidopsis thaliana gi|5080792|gb|AAD39302.1| Unknown prot... |
| Match: gi|15237393|ref|NP_199431.1| |
score: 49.68 |
e-value: 4.7e-05 |
Identity: 40.94% |
Span: 363bp (50.7%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis t... |
| Match: gi|13605589|gb|AAK32788.1| |
score: 49.68 |
e-value: 4.7e-05 |
Identity: 40.94% |
Span: 363bp (50.7%) |
Frame: 1 |
| gi|13605589|gb|AAK32788.1| AT5g46190/MCL19_25 [Arabidopsis thaliana] |
| Match: gi|21553916|gb|AAM62999.1| |
score: 49.68 |
e-value: 4.7e-05 |
Identity: 40.94% |
Span: 363bp (50.7%) |
Frame: 1 |
| unknown [Arabidopsis thaliana] |
| Match: gi|15217969|ref|NP_175569.1| |
score: 45.05 |
e-value: 0.001 |
Identity: 34.78% |
Span: 363bp (50.7%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi12321677|gb|AAG50879.1|AC025294_17 hypothetical protein [Arabi... |
| Match: gi|30683629|ref|NP_172869.2| |
score: 44.67 |
e-value: 3.9e-08 |
Identity: 33.08% |
Span: 378bp (52.8%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi30102666|gb|AAP21251.1| At1g14170 [Arabidopsis thaliana] >gi|1... |
| Match: gi|15217969|ref|NP_175569.1| |
score: 43.51 |
e-value: 0.003 |
Identity: 31.69% |
Span: 426bp (59.5%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi12321677|gb|AAG50879.1|AC025294_17 hypothetical protein [Arabi... |
| Match: gi|8809595|dbj|BAA97146.1| |
score: 43.51 |
e-value: 2.4e-07 |
Identity: 40% |
Span: 300bp (41.9%) |
Frame: 1 |
| RNA-binding protein-like [Arabidopsis thaliana] |
| Match: gi|30696273|ref|NP_200118.3| |
score: 43.51 |
e-value: 2.4e-07 |
Identity: 40% |
Span: 300bp (41.9%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi17065220|gb|AAL32764.1| RNA-binding protein-like [Arabidopsis ... |
| Match: gi|37535668|ref|NP_922136.1| |
score: 42.36 |
e-value: 8.8e-22 |
Identity: 62.07% |
Span: 87bp (12.2%) |
Frame: 2 |
| gi|37535668|ref|NP_922136.1| putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] gi|22128716|gb|AAM... |
| Match: gi|15229321|ref|NP_187112.1| |
score: 40.82 |
e-value: 0.00071 |
Identity: 34.04% |
Span: 282bp (39.4%) |
Frame: 1 |
| FLK (flowering locus KH domain); RNA binding / nucleic acid binding [Arabidopsis thaliana] >gi6175183|gb|AAF04909.1|A... |
| Match: gi|18921324|gb|AAL82529.1| |
score: 40.05 |
e-value: 2.3e-14 |
Identity: 58.62% |
Span: 87bp (12.2%) |
Frame: 2 |
| gi|18921324|gb|AAL82529.1| putative nucleic acid binding protein [Oryza sativa] |
| Match: gi|30685269|ref|NP_851040.1| |
score: 39.66 |
e-value: 3.8e-14 |
Identity: 60% |
Span: 75bp (10.5%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi30685276|ref|NP_197031.3| KH domain-containing protein [Arabid... |
| Match: gi|11357886|pir||T49962 |
score: 39.66 |
e-value: 3.8e-14 |
Identity: 60% |
Span: 75bp (10.5%) |
Frame: 2 |
| gi|11357886|pir||T49962 hypothetical protein F8M21.160 - Arabidopsis thaliana gi|7671496|emb|CAB89337.1| putative pro... |
| Match: gi|45752620|gb|AAS76208.1| |
score: 38.51 |
e-value: 7.6e-05 |
Identity: 29.17% |
Span: 270bp (37.7%) |
Frame: 1 |
| gi|45752620|gb|AAS76208.1| At2g03110 [Arabidopsis thaliana] >gi|46359791|gb|AAS88759.1| At2g03110 [Arabidopsis thalia... |
| Match: gi|15227534|ref|NP_178410.1| |
score: 38.51 |
e-value: 7.6e-05 |
Identity: 29.17% |
Span: 270bp (37.7%) |
Frame: 1 |
| gi|15227534|ref|NP_178410.1| KH domain protein [Arabidopsis thaliana] gi|7487149|pir||T02715 probable RNA-binding pro... |
| Match: gi|30683629|ref|NP_172869.2| |
score: 35.04 |
e-value: 3.9e-08 |
Identity: 56% |
Span: 75bp (10.5%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi30102666|gb|AAP21251.1| At1g14170 [Arabidopsis thaliana] >gi|1... |
| Match: gi|25518414|pir||C86275 |
score: 35.04 |
e-value: 7.8e-10 |
Identity: 56% |
Span: 75bp (10.5%) |
Frame: 2 |
| gi|25518414|pir||C86275 hypothetical protein [imported] - Arabidopsis thaliana gi|5080792|gb|AAD39302.1| Unknown prot... |
| Match: gi|30696273|ref|NP_200118.3| |
score: 33.5 |
e-value: 2.4e-07 |
Identity: 50% |
Span: 84bp (11.7%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi17065220|gb|AAL32764.1| RNA-binding protein-like [Arabidopsis ... |
| Match: gi|8809595|dbj|BAA97146.1| |
score: 33.5 |
e-value: 2.4e-07 |
Identity: 50% |
Span: 84bp (11.7%) |
Frame: 2 |
| RNA-binding protein-like [Arabidopsis thaliana] |
| Match: gi|45752620|gb|AAS76208.1| |
score: 30.03 |
e-value: 7.6e-05 |
Identity: 54.17% |
Span: 72bp (10.1%) |
Frame: 2 |
| gi|45752620|gb|AAS76208.1| At2g03110 [Arabidopsis thaliana] >gi|46359791|gb|AAS88759.1| At2g03110 [Arabidopsis thalia... |
| Match: gi|15227534|ref|NP_178410.1| |
score: 30.03 |
e-value: 7.6e-05 |
Identity: 54.17% |
Span: 72bp (10.1%) |
Frame: 2 |
| gi|15227534|ref|NP_178410.1| KH domain protein [Arabidopsis thaliana] gi|7487149|pir||T02715 probable RNA-binding pro... |
| Match: gi|15229321|ref|NP_187112.1| |
score: 24.25 |
e-value: 0.00071 |
Identity: 28.57% |
Span: 84bp (11.7%) |
Frame: 2 |
| FLK (flowering locus KH domain); RNA binding / nucleic acid binding [Arabidopsis thaliana] >gi6175183|gb|AAF04909.1|A... |
|
| arabidopsis/peptide [blastx] | Showing best 23 hits recorded |
| Match: At5g15270.1 |
score: 60.46 |
e-value: 1.1e-15 |
Identity: 33.73% |
Span: 492bp (68.7%) |
Frame: 1 |
| At5g15270.1 68412.m07802 KH domain protein various predicted proteins, Arabidopsis thaliana and Oryza sativa |
| Match: At5g15270.2 |
score: 60.46 |
e-value: 1.1e-15 |
Identity: 33.73% |
Span: 492bp (68.7%) |
Frame: 1 |
| At5g15270.2 68412.m07803 KH domain protein various predicted proteins, Arabidopsis thaliana and Oryza sativa |
| Match: At4g18375.1 |
score: 50.83 |
e-value: 6.3e-07 |
Identity: 41.94% |
Span: 357bp (49.9%) |
Frame: 1 |
| At4g18375.1 68411.m02487 KH domain protein contains similarity to RNA-binding KH-domains PF:00013 |
| Match: At4g18375.2 |
score: 50.83 |
e-value: 6.3e-07 |
Identity: 41.94% |
Span: 357bp (49.9%) |
Frame: 1 |
| At4g18375.2 68411.m02488 KH domain protein contains similarity to RNA-binding KH-domains PF:00013 |
| Match: At5g46190.1 |
score: 49.68 |
e-value: 1.4e-06 |
Identity: 40.94% |
Span: 363bp (50.7%) |
Frame: 1 |
| At5g46190.1 68412.m05122 KH domain protein strong similarity to unknown protein (pir||T04533) |
| Match: At1g51580.1 |
score: 45.05 |
e-value: 3.4e-05 |
Identity: 34.78% |
Span: 363bp (50.7%) |
Frame: 1 |
| At1g51580.1 68408.m05330 KH domain protein |
| Match: At1g14170.1 |
score: 44.67 |
e-value: 1.1e-09 |
Identity: 33.08% |
Span: 378bp (52.8%) |
Frame: 1 |
| At1g14170.1 68408.m01516 KH domain protein location of EST 219C14T7 , gb|N38506 |
| Match: At1g51580.1 |
score: 43.51 |
e-value: 0.0001 |
Identity: 31.69% |
Span: 426bp (59.5%) |
Frame: 1 |
| At1g51580.1 68408.m05330 KH domain protein |
| Match: At5g53060.1 |
score: 43.51 |
e-value: 6.9e-09 |
Identity: 40% |
Span: 300bp (41.9%) |
Frame: 1 |
| At5g53060.1 68412.m05959 KH domain protein |
| Match: At3g04610.1 |
score: 40.82 |
e-value: 2.1e-05 |
Identity: 34.04% |
Span: 282bp (39.4%) |
Frame: 1 |
| At3g04610.1 68410.m00455 KH domain protein similar putative nucleic acid binding protein GB:CAB39665 [Arabidopsis tha... |
| Match: At5g15270.1 |
score: 39.66 |
e-value: 1.1e-15 |
Identity: 60% |
Span: 75bp (10.5%) |
Frame: 2 |
| At5g15270.1 68412.m07802 KH domain protein various predicted proteins, Arabidopsis thaliana and Oryza sativa |
| Match: At5g15270.2 |
score: 39.66 |
e-value: 1.1e-15 |
Identity: 60% |
Span: 75bp (10.5%) |
Frame: 2 |
| At5g15270.2 68412.m07803 KH domain protein various predicted proteins, Arabidopsis thaliana and Oryza sativa |
| Match: At2g03110.1 |
score: 38.51 |
e-value: 2.2e-06 |
Identity: 29.17% |
Span: 270bp (37.7%) |
Frame: 1 |
| At2g03110.1 68409.m00230 KH domain protein |
| Match: At5g64390.1 |
score: 38.12 |
e-value: 0.004 |
Identity: 32.43% |
Span: 222bp (31.0%) |
Frame: 1 |
| At5g64390.1 68412.m07317 KH domain protein contains similarity to RNA-binding protein |
| Match: At5g64390.2 |
score: 38.12 |
e-value: 0.004 |
Identity: 32.43% |
Span: 222bp (31.0%) |
Frame: 1 |
| At5g64390.2 68418.m08088 KH domain-containing RNA-binding protein (HEN4) contains similarity to RNA-binding protein; ... |
| Match: At1g14170.1 |
score: 35.04 |
e-value: 1.1e-09 |
Identity: 56% |
Span: 75bp (10.5%) |
Frame: 2 |
| At1g14170.1 68408.m01516 KH domain protein location of EST 219C14T7 , gb|N38506 |
| Match: At1g14170.1 |
score: 34.27 |
e-value: 0.00035 |
Identity: 53.57% |
Span: 84bp (11.7%) |
Frame: 2 |
| At1g14170.1 68408.m01516 KH domain protein location of EST 219C14T7 , gb|N38506 |
| Match: At5g53060.1 |
score: 33.5 |
e-value: 6.9e-09 |
Identity: 50% |
Span: 84bp (11.7%) |
Frame: 2 |
| At5g53060.1 68412.m05959 KH domain protein |
| Match: At2g03110.1 |
score: 30.03 |
e-value: 2.2e-06 |
Identity: 54.17% |
Span: 72bp (10.1%) |
Frame: 2 |
| At2g03110.1 68409.m00230 KH domain protein |
| Match: At4g26000.1 |
score: 29.26 |
e-value: 0.004 |
Identity: 42.31% |
Span: 78bp (10.9%) |
Frame: 2 |
| At4g26000.1 68411.m03409 KH domain protein single-stranded nucleic acid-binding protein CBP - mouse, PIR2:S78515 |
| Match: At4g26000.1 |
score: 27.72 |
e-value: 0.004 |
Identity: 33.33% |
Span: 207bp (28.9%) |
Frame: 1 |
| At4g26000.1 68411.m03409 KH domain protein single-stranded nucleic acid-binding protein CBP - mouse, PIR2:S78515 |
| Match: At1g14170.1 |
score: 26.56 |
e-value: 0.00035 |
Identity: 31.15% |
Span: 366bp (51.1%) |
Frame: 1 |
| At1g14170.1 68408.m01516 KH domain protein location of EST 219C14T7 , gb|N38506 |
| Match: At3g04610.1 |
score: 24.25 |
e-value: 2.1e-05 |
Identity: 28.57% |
Span: 84bp (11.7%) |
Frame: 2 |
| At3g04610.1 68410.m00455 KH domain protein similar putative nucleic acid binding protein GB:CAB39665 [Arabidopsis tha... |
|
