| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|15217969|ref|NP_175569.1| |
score: 78.18 |
e-value: 1.2e-13 |
Identity: 38.46% |
Span: 378bp (52.1%) |
Frame: -2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi12321677|gb|AAG50879.1|AC025294_17 hypothetical protein [Arabi... |
| Match: gi|22328051|ref|NP_201244.2| |
score: 77.8 |
e-value: 1.6e-13 |
Identity: 47.3% |
Span: 222bp (30.6%) |
Frame: -2 |
| HEN4 (HUA ENHANCER 4); RNA binding / nucleic acid binding [Arabidopsis thaliana] |
| Match: gi|28261403|gb|AAO37828.1| |
score: 77.8 |
e-value: 1.6e-13 |
Identity: 47.3% |
Span: 222bp (30.6%) |
Frame: -2 |
| HEN4 [Arabidopsis thaliana] |
| Match: gi|8809595|dbj|BAA97146.1| |
score: 67.4 |
e-value: 2.2e-10 |
Identity: 45.21% |
Span: 219bp (30.2%) |
Frame: -2 |
| RNA-binding protein-like [Arabidopsis thaliana] |
| Match: gi|30696273|ref|NP_200118.3| |
score: 67.4 |
e-value: 2.2e-10 |
Identity: 45.21% |
Span: 219bp (30.2%) |
Frame: -2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi17065220|gb|AAL32764.1| RNA-binding protein-like [Arabidopsis ... |
| Match: gi|31212275|ref|XP_315122.1| |
score: 62 |
e-value: 9.2e-09 |
Identity: 37.86% |
Span: 309bp (42.6%) |
Frame: -2 |
| gi|31212275|ref|XP_315122.1| ENSANGP00000024214 [Anopheles gambiae] gi|30176296|gb|EAA44344.1| ENSANGP00000024214 [An... |
| Match: gi|25012664|gb|AAN71427.1| |
score: 60.85 |
e-value: 2e-08 |
Identity: 37.84% |
Span: 222bp (30.6%) |
Frame: -2 |
| gi|25012664|gb|AAN71427.1| RE50346p [Drosophila melanogaster] |
| Match: gi|6006748|gb|AAF00596.1| |
score: 60.85 |
e-value: 2e-08 |
Identity: 37.84% |
Span: 222bp (30.6%) |
Frame: -2 |
| gi|6006748|gb|AAF00596.1| hnRNP K protein homolog [Drosophila melanogaster] |
| Match: gi|37535668|ref|NP_922136.1| |
score: 60.46 |
e-value: 2.7e-08 |
Identity: 40.3% |
Span: 201bp (27.7%) |
Frame: -2 |
| gi|37535668|ref|NP_922136.1| putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] gi|22128716|gb|AAM... |
| Match: gi|8699624|gb|AAF78762.1| |
score: 60.08 |
e-value: 3.5e-08 |
Identity: 40.28% |
Span: 216bp (29.8%) |
Frame: -2 |
| gi|8699624|gb|AAF78762.1| bancal protein [Drosophila melanogaster] |
| Match: gi|21553916|gb|AAM62999.1| |
score: 60.08 |
e-value: 3.5e-08 |
Identity: 33.9% |
Span: 348bp (48.0%) |
Frame: -2 |
| unknown [Arabidopsis thaliana] |
| Match: gi|6687391|emb|CAB64936.1| |
score: 59.69 |
e-value: 4.6e-08 |
Identity: 40.58% |
Span: 207bp (28.6%) |
Frame: -2 |
| gi|6687391|emb|CAB64936.1| heterogeneous nuclear ribonucleoprotein (hnRNP) [Drosophila melanogaster] |
| Match: gi|17862704|gb|AAL39829.1| |
score: 59.69 |
e-value: 4.6e-08 |
Identity: 40.58% |
Span: 207bp (28.6%) |
Frame: -2 |
| gi|17862704|gb|AAL39829.1| LD45549p [Drosophila melanogaster] |
| Match: gi|24656342|ref|NP_665890.2| |
score: 59.69 |
e-value: 4.6e-08 |
Identity: 40.58% |
Span: 207bp (28.6%) |
Frame: -2 |
| gi|24656342|ref|NP_665890.2| bancal CG13425-PB [Drosophila melanogaster] gi|23240206|gb|AAM68390.2| CG13425-PB [Droso... |
| Match: gi|15237393|ref|NP_199431.1| |
score: 58.92 |
e-value: 7.8e-08 |
Identity: 44.29% |
Span: 210bp (29.0%) |
Frame: -2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis t... |
| Match: gi|15236863|ref|NP_193572.1| |
score: 55.07 |
e-value: 1.1e-06 |
Identity: 36.62% |
Span: 213bp (29.4%) |
Frame: -2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-conta... |
| Match: gi|27882469|gb|AAH44711.1| |
score: 50.45 |
e-value: 2.8e-05 |
Identity: 30.16% |
Span: 333bp (45.9%) |
Frame: -2 |
| gi|27882469|gb|AAH44711.1| Hnrpk-prov protein [Xenopus laevis] |
| Match: gi|13384620|ref|NP_079555.1| |
score: 49.29 |
e-value: 6.2e-05 |
Identity: 35.94% |
Span: 192bp (26.5%) |
Frame: -2 |
| gi|13384620|ref|NP_079555.1| heterogeneous nuclear ribonucleoprotein K [Mus musculus] gi|14165435|ref|NP_112552.1| he... |
| Match: gi|30681758|ref|NP_850026.1| |
score: 49.29 |
e-value: 6.2e-05 |
Identity: 33.8% |
Span: 213bp (29.4%) |
Frame: -2 |
| gi|30681758|ref|NP_850026.1| KH domain protein [Arabidopsis thaliana] |
| Match: gi|6980674|pdb|1KHM|A |
score: 49.29 |
e-value: 6.2e-05 |
Identity: 35.94% |
Span: 192bp (26.5%) |
Frame: -2 |
| gi|6980674|pdb|1KHM|A Chain A, C-Terminal Kh Domain Of Hnrnp K (Kh3) |
| Match: gi|22218811|pdb|1J5K|A |
score: 49.29 |
e-value: 6.2e-05 |
Identity: 35.94% |
Span: 192bp (26.5%) |
Frame: -2 |
| gi|22218811|pdb|1J5K|A Chain A, Complex Of The Kh3 Domain Of Hnrnp K With A Single_stranded 10mer Dna Oligonucleotide |
| Match: gi|542643|pir||S41224 |
score: 49.29 |
e-value: 6.2e-05 |
Identity: 28.93% |
Span: 360bp (49.7%) |
Frame: -2 |
| gi|542643|pir||S41224 hnRNP protein - African clawed frog gi|299029|gb|AAB26047.1| pre-mRNA binding K protein, hnRNP ... |
| Match: gi|26341878|dbj|BAC34601.1| |
score: 49.29 |
e-value: 6.2e-05 |
Identity: 35.94% |
Span: 192bp (26.5%) |
Frame: -2 |
| gi|26341878|dbj|BAC34601.1| unnamed protein product [Mus musculus] gi|26353476|dbj|BAC40368.1| unnamed protein produc... |
| Match: gi|460789|emb|CAA51267.1| |
score: 49.29 |
e-value: 6.2e-05 |
Identity: 35.94% |
Span: 192bp (26.5%) |
Frame: -2 |
| gi|460789|emb|CAA51267.1| transformation upregulated nuclear protein [Homo sapiens] |
| Match: gi|12230546|sp|O19049|ROK_RABIT |
score: 49.29 |
e-value: 6.2e-05 |
Identity: 35.94% |
Span: 192bp (26.5%) |
Frame: -2 |
| gi|12230546|sp|O19049|ROK_RABIT Heterogeneous nuclear ribonucleoprotein K (hnRNP K) gi|2644968|emb|CAA05815.1| hnRNP-... |
| Match: gi|473912|gb|AAA21731.1| |
score: 49.29 |
e-value: 6.2e-05 |
Identity: 35.94% |
Span: 192bp (26.5%) |
Frame: -2 |
| gi|473912|gb|AAA21731.1| phosphoprotein |
| Match: gi|1083569|pir||A54143 |
score: 49.29 |
e-value: 6.2e-05 |
Identity: 35.94% |
Span: 192bp (26.5%) |
Frame: -2 |
| gi|1083569|pir||A54143 kappa-B motif-binding phosphoprotein - mouse |
| Match: gi|14165437|ref|NP_112553.1| |
score: 49.29 |
e-value: 6.2e-05 |
Identity: 35.94% |
Span: 192bp (26.5%) |
Frame: -2 |
| gi|14165437|ref|NP_112553.1| heterogeneous nuclear ribonucleoprotein K isoform a; dC-stretch binding protein; transfo... |
| Match: gi|25412123|pir||E84614 |
score: 49.29 |
e-value: 6.2e-05 |
Identity: 33.8% |
Span: 213bp (29.4%) |
Frame: -2 |
| gi|25412123|pir||E84614 probable RNA-binding protein [imported] - Arabidopsis thaliana gi|4314357|gb|AAD15568.1| puta... |
| Match: gi|34865169|ref|XP_234098.2| |
score: 45.82 |
e-value: 0.00068 |
Identity: 36.11% |
Span: 207bp (28.6%) |
Frame: -2 |
| gi|34865169|ref|XP_234098.2| similar to RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1) (Onconeural ... |
| Match: gi|4505425|ref|NP_002506.1| |
score: 45.82 |
e-value: 0.00068 |
Identity: 36.11% |
Span: 207bp (28.6%) |
Frame: -2 |
| gi|4505425|ref|NP_002506.1| neuro-oncological ventral antigen 1 isoform 1; Neurooncological ventral antigen 1; parane... |
| Match: gi|6031187|ref|NP_006480.1| |
score: 45.82 |
e-value: 0.00068 |
Identity: 36.11% |
Span: 207bp (28.6%) |
Frame: -2 |
| gi|6031187|ref|NP_006480.1| neuro-oncological ventral antigen 1 isoform 2; Neurooncological ventral antigen 1; parane... |
| Match: gi|5902724|ref|NP_002507.1| |
score: 45.82 |
e-value: 0.00068 |
Identity: 32.11% |
Span: 318bp (43.9%) |
Frame: -2 |
| gi|5902724|ref|NP_002507.1| neuro-oncological ventral antigen 2; neuro-oncological ventral antigen 3 [Homo sapiens] g... |
| Match: gi|38050515|ref|XP_356586.1| |
score: 45.82 |
e-value: 0.00068 |
Identity: 36.11% |
Span: 207bp (28.6%) |
Frame: -2 |
| gi|38050515|ref|XP_356586.1| similar to RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1) (Ventral neu... |
| Match: gi|2673961|gb|AAB88661.1| |
score: 45.82 |
e-value: 0.00068 |
Identity: 32.11% |
Span: 318bp (43.9%) |
Frame: -2 |
| gi|2673961|gb|AAB88661.1| astrocytic NOVA-like RNA-binding protein [Homo sapiens] |
| Match: gi|4235140|gb|AAD13116.1| |
score: 45.82 |
e-value: 0.00068 |
Identity: 32.11% |
Span: 318bp (43.9%) |
Frame: -2 |
| gi|4235140|gb|AAD13116.1| RNA-binding protein Nova-2 [AA 29-492]; astrocytic NOVA-like RNA-binding protein [Homo sapi... |
| Match: gi|26338834|dbj|BAC33088.1| |
score: 45.82 |
e-value: 0.00068 |
Identity: 36.11% |
Span: 207bp (28.6%) |
Frame: -2 |
| gi|26338834|dbj|BAC33088.1| unnamed protein product [Mus musculus] |
| Match: gi|33516919|sp|Q80WA4|NOA1_RAT |
score: 45.82 |
e-value: 0.00068 |
Identity: 36.11% |
Span: 207bp (28.6%) |
Frame: -2 |
| gi|33516919|sp|Q80WA4|NOA1_RAT RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1) gi|30230625|gb|AAP208... |
| Match: gi|38050512|ref|XP_356585.1| |
score: 45.82 |
e-value: 0.00068 |
Identity: 36.11% |
Span: 207bp (28.6%) |
Frame: -2 |
| gi|38050512|ref|XP_356585.1| neuro-oncological ventral antigen 1 [Mus musculus] |
| Match: gi|32422371|ref|XP_331629.1| |
score: 45.82 |
e-value: 0.00068 |
Identity: 30% |
Span: 210bp (29.0%) |
Frame: -2 |
| gi|32422371|ref|XP_331629.1| hypothetical protein [Neurospora crassa] gi|28925551|gb|EAA34578.1| hypothetical protein... |
| Match: gi|33516943|sp|Q9JKN6|NOA1_MOUSE |
score: 45.82 |
e-value: 0.00068 |
Identity: 36.11% |
Span: 207bp (28.6%) |
Frame: -2 |
| gi|33516943|sp|Q9JKN6|NOA1_MOUSE RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1) (Ventral neuron-spe... |
| Match: gi|34904418|ref|NP_913556.1| |
score: 45.44 |
e-value: 0.00089 |
Identity: 36.23% |
Span: 204bp (28.1%) |
Frame: -2 |
| gi|34904418|ref|NP_913556.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|7339705|dbj|BAA92910... |
| Match: gi|34855285|ref|XP_214825.2| |
score: 45.05 |
e-value: 0.001 |
Identity: 30.33% |
Span: 342bp (47.2%) |
Frame: -2 |
| gi|34855285|ref|XP_214825.2| similar to astrocytic NOVA-like RNA-binding protein [Rattus norvegicus] |
| Match: gi|38086001|ref|XP_357715.1| |
score: 45.05 |
e-value: 0.001 |
Identity: 30.33% |
Span: 342bp (47.2%) |
Frame: -2 |
| gi|38086001|ref|XP_357715.1| similar to astrocytic NOVA-like RNA-binding protein [Mus musculus] |
| Match: gi|21595812|gb|AAH32690.1| |
score: 45.05 |
e-value: 0.001 |
Identity: 34.44% |
Span: 264bp (36.4%) |
Frame: -2 |
| gi|21595812|gb|AAH32690.1| TDRKH protein [Homo sapiens] |
| Match: gi|5803195|ref|NP_006853.1| |
score: 45.05 |
e-value: 0.001 |
Identity: 34.44% |
Span: 264bp (36.4%) |
Frame: -2 |
| gi|5803195|ref|NP_006853.1| tudor and KH domain containing; putative RNA binding protein; tudor and KH domain-contain... |
| Match: gi|7109258|gb|AAF36701.1| |
score: 45.05 |
e-value: 0.001 |
Identity: 34.44% |
Span: 264bp (36.4%) |
Frame: -2 |
| gi|7109258|gb|AAF36701.1| tudor and KH domain-containing protein [Homo sapiens] |
| Match: gi|7245684|pdb|1EC6|A |
score: 44.67 |
e-value: 0.002 |
Identity: 36.11% |
Span: 207bp (28.6%) |
Frame: -2 |
| gi|7245684|pdb|1EC6|A Chain A, Crystal Structure Of Nova-2 Kh3 K-Homology Rna-Binding Domain Bound To 20-Mer Rna Hair... |
| Match: gi|37535712|ref|NP_922158.1| |
score: 44.67 |
e-value: 0.002 |
Identity: 41.3% |
Span: 138bp (19.0%) |
Frame: -2 |
| gi|37535712|ref|NP_922158.1| putative membrane-associated protein [Oryza sativa (japonica cultivar-group)] gi|1807142... |
| Match: gi|38101960|gb|EAA48856.1| |
score: 44.67 |
e-value: 0.002 |
Identity: 32.14% |
Span: 168bp (23.2%) |
Frame: -2 |
| gi|38101960|gb|EAA48856.1| hypothetical protein MG00514.4 [Magnaporthe grisea 70-15] |
| Match: gi|32451938|gb|AAH54653.1| |
score: 43.9 |
e-value: 0.003 |
Identity: 33.9% |
Span: 177bp (24.4%) |
Frame: -2 |
| gi|32451938|gb|AAH54653.1| Unknown (protein for MGC:66162) [Danio rerio] |
| Match: gi|7245740|pdb|1DTJ|A |
score: 43.9 |
e-value: 0.003 |
Identity: 36.11% |
Span: 207bp (28.6%) |
Frame: -2 |
| gi|7245740|pdb|1DTJ|A Chain A, Crystal Structure Of Nova-2 Kh3 K-Homology Rna-Binding Domain gi|7245741|pdb|1DTJ|B Ch... |
| Match: gi|7245806|pdb|1DT4|A |
score: 43.9 |
e-value: 0.003 |
Identity: 36.92% |
Span: 186bp (25.7%) |
Frame: -2 |
| gi|7245806|pdb|1DT4|A Chain A, Crystal Structure Of Nova-1 Kh3 K-Homology Rna-Binding Domain |
| Match: gi|37589626|gb|AAH59161.1| |
score: 43.9 |
e-value: 0.003 |
Identity: 35.29% |
Span: 249bp (34.3%) |
Frame: -2 |
| gi|37589626|gb|AAH59161.1| Unknown (protein for MGC:72982) [Rattus norvegicus] |
| Match: gi|38077873|ref|XP_131021.3| |
score: 43.9 |
e-value: 0.003 |
Identity: 35.29% |
Span: 249bp (34.3%) |
Frame: -2 |
| gi|38077873|ref|XP_131021.3| RIKEN cDNA 2700091C21 [Mus musculus] gi|29387121|gb|AAH49363.1| Similar to tudor and KH ... |
| Match: gi|34784958|gb|AAH57030.1| |
score: 43.9 |
e-value: 0.003 |
Identity: 35.29% |
Span: 249bp (34.3%) |
Frame: -2 |
| gi|34784958|gb|AAH57030.1| Unknown (protein for MGC:67203) [Mus musculus] |
| Match: gi|37550496|ref|XP_209517.2| |
score: 43.51 |
e-value: 0.003 |
Identity: 34.38% |
Span: 192bp (26.5%) |
Frame: -2 |
| gi|37550496|ref|XP_209517.2| similar to heterogeneous nuclear ribonucleoprotein K isoform a; dC-stretch binding prote... |
| Match: gi|28302384|gb|AAH46731.1| |
score: 43.13 |
e-value: 0.004 |
Identity: 35.62% |
Span: 210bp (29.0%) |
Frame: -2 |
| gi|28302384|gb|AAH46731.1| MGC53786 protein [Xenopus laevis] |
| Match: gi|38175703|dbj|BAC84296.2| |
score: 42.74 |
e-value: 0.006 |
Identity: 36.71% |
Span: 237bp (32.7%) |
Frame: -2 |
| gi|38175703|dbj|BAC84296.2| unknown protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|21555233|gb|AAM63810.1| |
score: 42.74 |
e-value: 0.006 |
Identity: 30.14% |
Span: 219bp (30.2%) |
Frame: -2 |
| unknown [Arabidopsis thaliana] |
| Match: gi|15240145|ref|NP_196295.1| |
score: 42.74 |
e-value: 0.006 |
Identity: 30.14% |
Span: 219bp (30.2%) |
Frame: -2 |
| KH domain-containing protein / zinc finger (CCCH type) family protein [Arabidopsis thaliana] >gi75262408|sp|Q9FG30.1|... |
| Match: gi|31236039|ref|XP_319344.1| |
score: 42.74 |
e-value: 0.006 |
Identity: 37.5% |
Span: 216bp (29.8%) |
Frame: -2 |
| gi|31236039|ref|XP_319344.1| ENSANGP00000012473 [Anopheles gambiae] gi|21301714|gb|EAA13859.1| ENSANGP00000012473 [An... |
| Match: gi|16041180|dbj|BAB69757.1| |
score: 42.36 |
e-value: 0.008 |
Identity: 33.33% |
Span: 264bp (36.4%) |
Frame: -2 |
| gi|16041180|dbj|BAB69757.1| hypothetical protein [Macaca fascicularis] |
| Match: gi|38050515|ref|XP_356586.1| |
score: 41.97 |
e-value: 0.01 |
Identity: 37.5% |
Span: 186bp (25.7%) |
Frame: -2 |
| gi|38050515|ref|XP_356586.1| similar to RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1) (Ventral neu... |
| Match: gi|33516943|sp|Q9JKN6|NOA1_MOUSE |
score: 41.97 |
e-value: 0.01 |
Identity: 37.5% |
Span: 186bp (25.7%) |
Frame: -2 |
| gi|33516943|sp|Q9JKN6|NOA1_MOUSE RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1) (Ventral neuron-spe... |
| Match: gi|38050512|ref|XP_356585.1| |
score: 41.97 |
e-value: 0.01 |
Identity: 37.5% |
Span: 186bp (25.7%) |
Frame: -2 |
| gi|38050512|ref|XP_356585.1| neuro-oncological ventral antigen 1 [Mus musculus] |
| Match: gi|33516919|sp|Q80WA4|NOA1_RAT |
score: 41.97 |
e-value: 0.01 |
Identity: 37.5% |
Span: 186bp (25.7%) |
Frame: -2 |
| gi|33516919|sp|Q80WA4|NOA1_RAT RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1) gi|30230625|gb|AAP208... |
| Match: gi|34865169|ref|XP_234098.2| |
score: 41.97 |
e-value: 0.01 |
Identity: 37.5% |
Span: 186bp (25.7%) |
Frame: -2 |
| gi|34865169|ref|XP_234098.2| similar to RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1) (Onconeural ... |
| Match: gi|10947014|ref|NP_067543.1| |
score: 41.59 |
e-value: 0.013 |
Identity: 38.18% |
Span: 162bp (22.3%) |
Frame: -2 |
| gi|10947014|ref|NP_067543.1| poly(rC) binding protein 3; poly(rC)-binding protein 3 [Mus musculus] gi|12230428|sp|P57... |
| Match: gi|21753335|dbj|BAC04327.1| |
score: 41.59 |
e-value: 0.013 |
Identity: 38.18% |
Span: 162bp (22.3%) |
Frame: -2 |
| gi|21753335|dbj|BAC04327.1| unnamed protein product [Homo sapiens] |
| Match: gi|18399496|ref|NP_566412.1| |
score: 41.59 |
e-value: 0.013 |
Identity: 28.69% |
Span: 357bp (49.2%) |
Frame: -2 |
| KH domain-containing protein / zinc finger (CCCH type) family protein [Arabidopsis thaliana] >gi75268236|sp|Q9C7C3.1|... |
| Match: gi|15082311|gb|AAH12061.1| |
score: 41.59 |
e-value: 0.013 |
Identity: 38.18% |
Span: 162bp (22.3%) |
Frame: -2 |
| gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens] |
| Match: gi|10092617|ref|NP_065389.1| |
score: 41.59 |
e-value: 0.013 |
Identity: 38.18% |
Span: 162bp (22.3%) |
Frame: -2 |
| gi|10092617|ref|NP_065389.1| poly(rC) binding protein 3; poly(rC)-binding protein 3; poly (rC)-binding protein 3 [Hom... |
| Match: gi|26330216|dbj|BAC28838.1| |
score: 41.59 |
e-value: 0.013 |
Identity: 38.18% |
Span: 162bp (22.3%) |
Frame: -2 |
| gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus] |
| Match: gi|4505425|ref|NP_002506.1| |
score: 41.59 |
e-value: 0.013 |
Identity: 35.94% |
Span: 186bp (25.7%) |
Frame: -2 |
| gi|4505425|ref|NP_002506.1| neuro-oncological ventral antigen 1 isoform 1; Neurooncological ventral antigen 1; parane... |
| Match: gi|6031187|ref|NP_006480.1| |
score: 41.59 |
e-value: 0.013 |
Identity: 35.94% |
Span: 186bp (25.7%) |
Frame: -2 |
| gi|6031187|ref|NP_006480.1| neuro-oncological ventral antigen 1 isoform 2; Neurooncological ventral antigen 1; parane... |
| Match: gi|26348076|dbj|BAC37686.1| |
score: 41.59 |
e-value: 0.013 |
Identity: 38.18% |
Span: 162bp (22.3%) |
Frame: -2 |
| gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus] |
| Match: gi|27503479|gb|AAH42440.1| |
score: 41.59 |
e-value: 0.013 |
Identity: 38.18% |
Span: 162bp (22.3%) |
Frame: -2 |
| gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus] |
| Match: gi|9294110|dbj|BAB01961.1| |
score: 41.59 |
e-value: 0.013 |
Identity: 28.69% |
Span: 357bp (49.2%) |
Frame: -2 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|23509372|ref|NP_702039.1| |
score: 41.2 |
e-value: 0.017 |
Identity: 35.19% |
Span: 162bp (22.3%) |
Frame: -2 |
| gi|23509372|ref|NP_702039.1| hypothetical protein [Plasmodium falciparum 3D7] gi|23497216|gb|AAN36763.1| hypothetical... |
| Match: gi|34853260|ref|XP_231085.2| |
score: 41.2 |
e-value: 0.017 |
Identity: 28.12% |
Span: 192bp (26.5%) |
Frame: -2 |
| gi|34853260|ref|XP_231085.2| similar to heterogeneous nuclear ribonucleoprotein K isoform a; dC-stretch binding prote... |
| Match: gi|16924113|gb|AAL31692.1| |
score: 40.82 |
e-value: 0.022 |
Identity: 27.18% |
Span: 306bp (42.2%) |
Frame: -2 |
| gi|16924113|gb|AAL31692.1| putative RNA binding protein [Oryza sativa] |
| Match: gi|34855285|ref|XP_214825.2| |
score: 40.82 |
e-value: 0.022 |
Identity: 33.85% |
Span: 186bp (25.7%) |
Frame: -2 |
| gi|34855285|ref|XP_214825.2| similar to astrocytic NOVA-like RNA-binding protein [Rattus norvegicus] |
| Match: gi|25992561|gb|AAN77160.1| |
score: 40.43 |
e-value: 0.029 |
Identity: 28.95% |
Span: 228bp (31.4%) |
Frame: -2 |
| gi|25992561|gb|AAN77160.1| RNA-binding protein VgRBP71 [Xenopus laevis] |
| Match: gi|19424312|ref|NP_598286.1| |
score: 40.05 |
e-value: 0.037 |
Identity: 30.67% |
Span: 225bp (31.0%) |
Frame: -2 |
| gi|19424312|ref|NP_598286.1| MAP2 RNA trans-acting protein MARTA1 [Rattus norvegicus] gi|37078084|sp|Q99PF5|FUB2_RAT ... |
| Match: gi|4504865|ref|NP_003676.1| |
score: 40.05 |
e-value: 0.037 |
Identity: 30.67% |
Span: 225bp (31.0%) |
Frame: -2 |
| gi|4504865|ref|NP_003676.1| KH-type splicing regulatory protein (FUSE binding protein 2); KH-type splicing regulatory... |
| Match: gi|15229321|ref|NP_187112.1| |
score: 40.05 |
e-value: 0.037 |
Identity: 31.08% |
Span: 222bp (30.6%) |
Frame: -2 |
| FLK (flowering locus KH domain); RNA binding / nucleic acid binding [Arabidopsis thaliana] >gi6175183|gb|AAF04909.1|A... |
| Match: gi|37078468|sp|Q92945|FUB2_HUMAN |
score: 40.05 |
e-value: 0.037 |
Identity: 30.67% |
Span: 225bp (31.0%) |
Frame: -2 |
| gi|37078468|sp|Q92945|FUB2_HUMAN Far upstream element binding protein 2 (FUSE binding protein 2) (KH type splicing re... |
| Match: gi|1575607|gb|AAC50892.1| |
score: 40.05 |
e-value: 0.037 |
Identity: 30.67% |
Span: 225bp (31.0%) |
Frame: -2 |
| gi|1575607|gb|AAC50892.1| FUSE binding protein 2 [Homo sapiens] |
| Match: gi|32564299|ref|NP_497351.2| |
score: 39.66 |
e-value: 0.049 |
Identity: 31.75% |
Span: 186bp (25.7%) |
Frame: -2 |
| gi|32564299|ref|NP_497351.2| patterned Expression Site PES-4, poly(rC)-binding protein-like, similar to heterogenous ... |
| Match: gi|34855285|ref|XP_214825.2| |
score: 39.66 |
e-value: 0.049 |
Identity: 30% |
Span: 234bp (32.3%) |
Frame: -2 |
| gi|34855285|ref|XP_214825.2| similar to astrocytic NOVA-like RNA-binding protein [Rattus norvegicus] |
| Match: gi|28279638|gb|AAH45508.1| |
score: 39.66 |
e-value: 0.049 |
Identity: 38.89% |
Span: 159bp (21.9%) |
Frame: -2 |
| gi|28279638|gb|AAH45508.1| Similar to poly(rC) binding protein 2 [Danio rerio] gi|37681899|gb|AAQ97827.1| poly(rC) bi... |
| Match: gi|2673961|gb|AAB88661.1| |
score: 39.66 |
e-value: 0.049 |
Identity: 30% |
Span: 234bp (32.3%) |
Frame: -2 |
| gi|2673961|gb|AAB88661.1| astrocytic NOVA-like RNA-binding protein [Homo sapiens] |
| Match: gi|5902724|ref|NP_002507.1| |
score: 39.66 |
e-value: 0.049 |
Identity: 30% |
Span: 234bp (32.3%) |
Frame: -2 |
| gi|5902724|ref|NP_002507.1| neuro-oncological ventral antigen 2; neuro-oncological ventral antigen 3 [Homo sapiens] g... |
| Match: gi|38086001|ref|XP_357715.1| |
score: 39.66 |
e-value: 0.049 |
Identity: 30% |
Span: 234bp (32.3%) |
Frame: -2 |
| gi|38086001|ref|XP_357715.1| similar to astrocytic NOVA-like RNA-binding protein [Mus musculus] |
| Match: gi|4235140|gb|AAD13116.1| |
score: 39.66 |
e-value: 0.049 |
Identity: 30% |
Span: 234bp (32.3%) |
Frame: -2 |
| gi|4235140|gb|AAD13116.1| RNA-binding protein Nova-2 [AA 29-492]; astrocytic NOVA-like RNA-binding protein [Homo sapi... |
| Match: gi|5453854|ref|NP_006187.1| |
score: 39.28 |
e-value: 0.064 |
Identity: 33.33% |
Span: 213bp (29.4%) |
Frame: -2 |
| gi|5453854|ref|NP_006187.1| poly(rC) binding protein 1; heterogenous nuclear ribonucleoprotein X; poly(rC)-binding pr... |
| Match: gi|444021|emb|CAA82631.1| |
score: 39.28 |
e-value: 0.064 |
Identity: 33.33% |
Span: 213bp (29.4%) |
Frame: -2 |
| gi|444021|emb|CAA82631.1| sub2.3 [Homo sapiens] |
| Match: gi|15229321|ref|NP_187112.1| |
score: 39.28 |
e-value: 0.064 |
Identity: 32.73% |
Span: 165bp (22.8%) |
Frame: -2 |
| FLK (flowering locus KH domain); RNA binding / nucleic acid binding [Arabidopsis thaliana] >gi6175183|gb|AAF04909.1|A... |
| Match: gi|37535668|ref|NP_922136.1| |
score: 39.28 |
e-value: 0.064 |
Identity: 34.38% |
Span: 189bp (26.1%) |
Frame: -2 |
| gi|37535668|ref|NP_922136.1| putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] gi|22128716|gb|AAM... |
|
| 3 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 20 hits recorded |
| Match: At1g51580.1 |
score: 78.18 |
e-value: 4.4e-15 |
Identity: 38.46% |
Span: 378bp (52.1%) |
Frame: -2 |
| At1g51580.1 68408.m05330 KH domain protein |
| Match: At5g64390.1 |
score: 77.8 |
e-value: 5.7e-15 |
Identity: 47.3% |
Span: 222bp (30.6%) |
Frame: -2 |
| At5g64390.1 68412.m07317 KH domain protein contains similarity to RNA-binding protein |
| Match: At5g53060.1 |
score: 67.4 |
e-value: 7.7e-12 |
Identity: 45.21% |
Span: 219bp (30.2%) |
Frame: -2 |
| At5g53060.1 68412.m05959 KH domain protein |
| Match: At5g46190.1 |
score: 58.92 |
e-value: 2.7e-09 |
Identity: 44.29% |
Span: 210bp (29.0%) |
Frame: -2 |
| At5g46190.1 68412.m05122 KH domain protein strong similarity to unknown protein (pir||T04533) |
| Match: At4g18375.2 |
score: 55.07 |
e-value: 4e-08 |
Identity: 36.62% |
Span: 213bp (29.4%) |
Frame: -2 |
| At4g18375.2 68411.m02488 KH domain protein contains similarity to RNA-binding KH-domains PF:00013 |
| Match: At2g22600.1 |
score: 49.29 |
e-value: 2.2e-06 |
Identity: 33.8% |
Span: 213bp (29.4%) |
Frame: -2 |
| At2g22600.1 68409.m02429 KH domain protein |
| Match: At5g06770.1 |
score: 42.74 |
e-value: 0.0002 |
Identity: 30.14% |
Span: 219bp (30.2%) |
Frame: -2 |
| At5g06770.1 68412.m00709 KH domain/zinc finger protein contains similarity to unknown protein (dbj|BAA82391.1) |
| Match: At3g12130.1 |
score: 41.59 |
e-value: 0.00045 |
Identity: 28.69% |
Span: 357bp (49.2%) |
Frame: -2 |
| At3g12130.1 68410.m01352 KH domain/zinc finger protein |
| Match: At3g04610.1 |
score: 40.05 |
e-value: 0.001 |
Identity: 31.08% |
Span: 222bp (30.6%) |
Frame: -2 |
| At3g04610.1 68410.m00455 KH domain protein similar putative nucleic acid binding protein GB:CAB39665 [Arabidopsis tha... |
| Match: At3g04610.1 |
score: 39.28 |
e-value: 0.002 |
Identity: 32.73% |
Span: 165bp (22.8%) |
Frame: -2 |
| At3g04610.1 68410.m00455 KH domain protein similar putative nucleic acid binding protein GB:CAB39665 [Arabidopsis tha... |
| Match: At2g25970.1 |
score: 38.89 |
e-value: 0.003 |
Identity: 27% |
Span: 282bp (38.9%) |
Frame: -2 |
| At2g25970.1 68409.m02825 KH domain protein |
| Match: At1g51580.1 |
score: 36.58 |
e-value: 0.015 |
Identity: 27.27% |
Span: 231bp (31.9%) |
Frame: -2 |
| At1g51580.1 68408.m05330 KH domain protein |
| Match: At5g15270.1 |
score: 35.81 |
e-value: 0.025 |
Identity: 30.51% |
Span: 177bp (24.4%) |
Frame: -2 |
| At5g15270.1 68412.m07802 KH domain protein various predicted proteins, Arabidopsis thaliana and Oryza sativa |
| Match: At5g15270.2 |
score: 35.81 |
e-value: 0.025 |
Identity: 30.51% |
Span: 177bp (24.4%) |
Frame: -2 |
| At5g15270.2 68412.m07803 KH domain protein various predicted proteins, Arabidopsis thaliana and Oryza sativa |
| Match: At4g18375.2 |
score: 35.04 |
e-value: 0.042 |
Identity: 27.14% |
Span: 204bp (28.1%) |
Frame: -2 |
| At4g18375.2 68411.m02488 KH domain protein contains similarity to RNA-binding KH-domains PF:00013 |
| Match: At4g18375.1 |
score: 35.04 |
e-value: 0.042 |
Identity: 27.14% |
Span: 204bp (28.1%) |
Frame: -2 |
| At4g18375.1 68411.m02487 KH domain protein contains similarity to RNA-binding KH-domains PF:00013 |
| Match: At1g33680.1 |
score: 34.65 |
e-value: 0.055 |
Identity: 31.4% |
Span: 249bp (34.3%) |
Frame: -2 |
| At1g33680.1 68408.m03775 KH domain protein similar to FUSE binding protein 2 GB:AAC50892 GI:1575607 from [Homo sapiens] |
| Match: At4g26000.1 |
score: 33.88 |
e-value: 0.095 |
Identity: 27.45% |
Span: 153bp (21.1%) |
Frame: -2 |
| At4g26000.1 68411.m03409 KH domain protein single-stranded nucleic acid-binding protein CBP - mouse, PIR2:S78515 |
| Match: At5g04430.2 |
score: 33.88 |
e-value: 0.095 |
Identity: 28.57% |
Span: 222bp (30.6%) |
Frame: -2 |
| At5g04430.2 68412.m08203 KH domain protein Nova, putative astrocytic NOVA-like RNA-binding protein, Homo sapiens, U70... |
| Match: At5g04430.1 |
score: 33.88 |
e-value: 0.095 |
Identity: 28.57% |
Span: 222bp (30.6%) |
Frame: -2 |
| At5g04430.1 68412.m08202 KH domain protein Nova, putative astrocytic NOVA-like RNA-binding protein, Homo sapiens, U70... |
|
