| genbank/nr [blastx] | Showing best 51 hits recorded |
| Match: gi|30696140|ref|NP_200017.2| |
score: 64.31 |
e-value: 1.8e-09 |
Identity: 72.22% |
Span: 108bp (14.9%) |
Frame: 1 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|1707370|emb|CAA67799.1| |
score: 64.31 |
e-value: 1.8e-09 |
Identity: 72.22% |
Span: 108bp (14.9%) |
Frame: 1 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|30696138|ref|NP_851174.1| |
score: 64.31 |
e-value: 1.8e-09 |
Identity: 72.22% |
Span: 108bp (14.9%) |
Frame: 1 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi21542447|sp|P92966.2|RSP41... |
| Match: gi|15235112|ref|NP_194280.1| |
score: 62.77 |
e-value: 5.4e-09 |
Identity: 69.44% |
Span: 108bp (14.9%) |
Frame: 1 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi4033468|sp|P92965.2|RSP40_... |
| Match: gi|1667582|gb|AAB18813.1| |
score: 61.62 |
e-value: 1.2e-08 |
Identity: 66.67% |
Span: 108bp (14.9%) |
Frame: 1 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|25386572|pir||F85294 |
score: 60.85 |
e-value: 2e-08 |
Identity: 68.57% |
Span: 105bp (14.4%) |
Frame: 1 |
| gi|25386572|pir||F85294 splicing factor At-SRp40 [imported] - Arabidopsis thaliana gi|7269400|emb|CAB81360.1| splicin... |
| Match: gi|11358856|pir||T51304 |
score: 58.54 |
e-value: 1e-07 |
Identity: 69.44% |
Span: 108bp (14.9%) |
Frame: 1 |
| gi|11358856|pir||T51304 splicing factor RSp31 [imported] - Arabidopsis thaliana gi|1707366|emb|CAA67798.1| splicing f... |
| Match: gi|11346383|pir||T47978 |
score: 58.54 |
e-value: 1e-07 |
Identity: 69.44% |
Span: 108bp (14.9%) |
Frame: 1 |
| gi|11346383|pir||T47978 splicing factor RSP31 [similarity] - Arabidopsis thaliana gi|6899884|emb|CAB71893.1| ARGININE... |
| Match: gi|18412169|ref|NP_567120.1| |
score: 58.54 |
e-value: 1e-07 |
Identity: 69.44% |
Span: 108bp (14.9%) |
Frame: 1 |
| RSP31; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi26454661|sp|P92964.2|RSP31_A... |
| Match: gi|38344865|emb|CAE01291.2| |
score: 56.22 |
e-value: 5e-07 |
Identity: 61.11% |
Span: 108bp (14.9%) |
Frame: 1 |
| gi|38344865|emb|CAE01291.2| OSJNBa0020P07.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15226019|ref|NP_182184.1| |
score: 51.6 |
e-value: 1.2e-05 |
Identity: 58.33% |
Span: 108bp (14.9%) |
Frame: 1 |
| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] >gi4415941|gb|AAD20171.1| putative arginine/ser... |
| Match: gi|26449170|dbj|BAC36925.1| |
score: 41.97 |
e-value: 0.01 |
Identity: 47.22% |
Span: 108bp (14.9%) |
Frame: 1 |
| gi|26449170|dbj|BAC36925.1| unnamed protein product [Mus musculus] |
| Match: gi|1082713|pir||A48133 |
score: 41.97 |
e-value: 0.01 |
Identity: 47.22% |
Span: 108bp (14.9%) |
Frame: 1 |
| gi|1082713|pir||A48133 pre-mRNA splicing SRp75 - human gi|307438|gb|AAA36649.1| pre-mRNA splicing factor |
| Match: gi|20978758|sp|Q8VE97|SFR4_MOUSE |
score: 41.97 |
e-value: 0.01 |
Identity: 47.22% |
Span: 108bp (14.9%) |
Frame: 1 |
| gi|20978758|sp|Q8VE97|SFR4_MOUSE Splicing factor, arginine/serine-rich 4 gi|18043896|gb|AAH19437.1| Sfrs4 protein [Mu... |
| Match: gi|28461393|gb|AAH46895.1| |
score: 41.97 |
e-value: 0.01 |
Identity: 47.22% |
Span: 108bp (14.9%) |
Frame: 1 |
| gi|28461393|gb|AAH46895.1| Similar to splicing factor, arginine/serine-rich 4 (SRp75) [Danio rerio] |
| Match: gi|30585347|gb|AAP36946.1| |
score: 41.97 |
e-value: 0.01 |
Identity: 47.22% |
Span: 108bp (14.9%) |
Frame: 1 |
| gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginine/serine-rich 4 [synthetic construct] |
| Match: gi|21361282|ref|NP_005617.2| |
score: 41.97 |
e-value: 0.01 |
Identity: 47.22% |
Span: 108bp (14.9%) |
Frame: 1 |
| gi|21361282|ref|NP_005617.2| splicing factor, arginine/serine-rich 4 [Homo sapiens] gi|20981726|sp|Q08170|SFR4_HUMAN ... |
| Match: gi|2914669|gb|AAC04476.1| |
score: 41.97 |
e-value: 0.01 |
Identity: 47.22% |
Span: 108bp (14.9%) |
Frame: 1 |
| gi|2914669|gb|AAC04476.1| SRP0001LB [Homo sapiens] |
| Match: gi|25150290|ref|NP_499649.2| |
score: 41.59 |
e-value: 0.013 |
Identity: 40% |
Span: 135bp (18.6%) |
Frame: 1 |
| gi|25150290|ref|NP_499649.2| serine/aRginine rich pre-mRNA SPlicing factor, SF2, substrate of the SR protein kinase S... |
| Match: gi|11527011|gb|AAG36874.1| |
score: 41.59 |
e-value: 0.013 |
Identity: 40% |
Span: 135bp (18.6%) |
Frame: 1 |
| gi|11527011|gb|AAG36874.1| SF2 [Caenorhabditis elegans] |
| Match: gi|19114691|ref|NP_593779.1| |
score: 39.28 |
e-value: 0.064 |
Identity: 34.15% |
Span: 123bp (16.9%) |
Frame: 1 |
| gi|19114691|ref|NP_593779.1| putative U1 small nuclear ribonucleoprotein [Schizosaccharomyces pombe] gi|7493123|pir||... |
| Match: gi|6759507|emb|CAB69816.1| |
score: 34.27 |
e-value: 0.032 |
Identity: 52% |
Span: 75bp (10.3%) |
Frame: 3 |
| gi|6759507|emb|CAB69816.1| putative arginine/serine-rich splicing factor [Elaeis guineensis] |
| Match: gi|1667582|gb|AAB18813.1| |
score: 33.88 |
e-value: 5.7e-06 |
Identity: 47.73% |
Span: 117bp (16.1%) |
Frame: 2 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|15226019|ref|NP_182184.1| |
score: 33.88 |
e-value: 0.00044 |
Identity: 52% |
Span: 75bp (10.3%) |
Frame: 3 |
| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] >gi4415941|gb|AAD20171.1| putative arginine/ser... |
| Match: gi|30696138|ref|NP_851174.1| |
score: 33.5 |
e-value: 3.3e-05 |
Identity: 55.88% |
Span: 99bp (13.6%) |
Frame: 2 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi21542447|sp|P92966.2|RSP41... |
| Match: gi|11358856|pir||T51304 |
score: 33.5 |
e-value: 0.01 |
Identity: 52% |
Span: 75bp (10.3%) |
Frame: 3 |
| gi|11358856|pir||T51304 splicing factor RSp31 [imported] - Arabidopsis thaliana gi|1707366|emb|CAA67798.1| splicing f... |
| Match: gi|30696140|ref|NP_200017.2| |
score: 33.5 |
e-value: 3.3e-05 |
Identity: 55.88% |
Span: 99bp (13.6%) |
Frame: 2 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|1707370|emb|CAA67799.1| |
score: 33.5 |
e-value: 3.3e-05 |
Identity: 55.88% |
Span: 99bp (13.6%) |
Frame: 2 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|18412169|ref|NP_567120.1| |
score: 33.5 |
e-value: 0.01 |
Identity: 52% |
Span: 75bp (10.3%) |
Frame: 3 |
| RSP31; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi26454661|sp|P92964.2|RSP31_A... |
| Match: gi|11346383|pir||T47978 |
score: 33.5 |
e-value: 0.01 |
Identity: 52% |
Span: 75bp (10.3%) |
Frame: 3 |
| gi|11346383|pir||T47978 splicing factor RSP31 [similarity] - Arabidopsis thaliana gi|6899884|emb|CAB71893.1| ARGININE... |
| Match: gi|25386572|pir||F85294 |
score: 32.34 |
e-value: 5.7e-06 |
Identity: 56% |
Span: 75bp (10.3%) |
Frame: 3 |
| gi|25386572|pir||F85294 splicing factor At-SRp40 [imported] - Arabidopsis thaliana gi|7269400|emb|CAB81360.1| splicin... |
| Match: gi|1667582|gb|AAB18813.1| |
score: 32.34 |
e-value: 5.7e-06 |
Identity: 56% |
Span: 75bp (10.3%) |
Frame: 3 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|15235112|ref|NP_194280.1| |
score: 32.34 |
e-value: 5.7e-06 |
Identity: 56% |
Span: 75bp (10.3%) |
Frame: 3 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi4033468|sp|P92965.2|RSP40_... |
| Match: gi|15235112|ref|NP_194280.1| |
score: 31.96 |
e-value: 5.7e-06 |
Identity: 45.45% |
Span: 117bp (16.1%) |
Frame: 2 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi4033468|sp|P92965.2|RSP40_... |
| Match: gi|25386572|pir||F85294 |
score: 31.96 |
e-value: 5.7e-06 |
Identity: 45.45% |
Span: 117bp (16.1%) |
Frame: 2 |
| gi|25386572|pir||F85294 splicing factor At-SRp40 [imported] - Arabidopsis thaliana gi|7269400|emb|CAB81360.1| splicin... |
| Match: gi|15226019|ref|NP_182184.1| |
score: 31.96 |
e-value: 0.00044 |
Identity: 50% |
Span: 96bp (13.2%) |
Frame: 2 |
| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] >gi4415941|gb|AAD20171.1| putative arginine/ser... |
| Match: gi|30696138|ref|NP_851174.1| |
score: 31.57 |
e-value: 3.3e-05 |
Identity: 52% |
Span: 75bp (10.3%) |
Frame: 3 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi21542447|sp|P92966.2|RSP41... |
| Match: gi|30696140|ref|NP_200017.2| |
score: 31.57 |
e-value: 3.3e-05 |
Identity: 52% |
Span: 75bp (10.3%) |
Frame: 3 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|1707370|emb|CAA67799.1| |
score: 31.57 |
e-value: 3.3e-05 |
Identity: 52% |
Span: 75bp (10.3%) |
Frame: 3 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|38344865|emb|CAE01291.2| |
score: 31.19 |
e-value: 0.045 |
Identity: 44% |
Span: 75bp (10.3%) |
Frame: 3 |
| gi|38344865|emb|CAE01291.2| OSJNBa0020P07.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|11346383|pir||T47978 |
score: 27.72 |
e-value: 0.01 |
Identity: 46.88% |
Span: 96bp (13.2%) |
Frame: 2 |
| gi|11346383|pir||T47978 splicing factor RSP31 [similarity] - Arabidopsis thaliana gi|6899884|emb|CAB71893.1| ARGININE... |
| Match: gi|38344865|emb|CAE01291.2| |
score: 27.72 |
e-value: 0.045 |
Identity: 73.33% |
Span: 45bp (6.2%) |
Frame: 2 |
| gi|38344865|emb|CAE01291.2| OSJNBa0020P07.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|18412169|ref|NP_567120.1| |
score: 27.72 |
e-value: 0.01 |
Identity: 46.88% |
Span: 96bp (13.2%) |
Frame: 2 |
| RSP31; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi26454661|sp|P92964.2|RSP31_A... |
| Match: gi|11358856|pir||T51304 |
score: 27.72 |
e-value: 0.01 |
Identity: 46.88% |
Span: 96bp (13.2%) |
Frame: 2 |
| gi|11358856|pir||T51304 splicing factor RSp31 [imported] - Arabidopsis thaliana gi|1707366|emb|CAA67798.1| splicing f... |
| Match: gi|25386572|pir||F85294 |
score: 26.95 |
e-value: 5.7e-06 |
Identity: 81.25% |
Span: 96bp (13.2%) |
Frame: 1 |
| gi|25386572|pir||F85294 splicing factor At-SRp40 [imported] - Arabidopsis thaliana gi|7269400|emb|CAB81360.1| splicin... |
| Match: gi|15235112|ref|NP_194280.1| |
score: 26.95 |
e-value: 5.7e-06 |
Identity: 81.25% |
Span: 96bp (13.2%) |
Frame: 1 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi4033468|sp|P92965.2|RSP40_... |
| Match: gi|6759507|emb|CAB69816.1| |
score: 25.41 |
e-value: 0.032 |
Identity: 40.62% |
Span: 96bp (13.2%) |
Frame: 2 |
| gi|6759507|emb|CAB69816.1| putative arginine/serine-rich splicing factor [Elaeis guineensis] |
| Match: gi|1667582|gb|AAB18813.1| |
score: 25.02 |
e-value: 5.7e-06 |
Identity: 78.12% |
Span: 96bp (13.2%) |
Frame: 1 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|30696140|ref|NP_200017.2| |
score: 23.48 |
e-value: 3.3e-05 |
Identity: 75% |
Span: 96bp (13.2%) |
Frame: 1 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|1707370|emb|CAA67799.1| |
score: 23.48 |
e-value: 3.3e-05 |
Identity: 75% |
Span: 96bp (13.2%) |
Frame: 1 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|30696138|ref|NP_851174.1| |
score: 23.48 |
e-value: 3.3e-05 |
Identity: 75% |
Span: 96bp (13.2%) |
Frame: 1 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi21542447|sp|P92966.2|RSP41... |
|
| arabidopsis/peptide [blastx] | Showing best 27 hits recorded |
| Match: At5g52040.2 |
score: 64.31 |
e-value: 6.5e-11 |
Identity: 72.22% |
Span: 108bp (14.9%) |
Frame: 1 |
| At5g52040.2 68412.m07957 arginine/serine-rich splicing factor RSp41 |
| Match: At5g52040.1 |
score: 64.31 |
e-value: 6.5e-11 |
Identity: 72.22% |
Span: 108bp (14.9%) |
Frame: 1 |
| At5g52040.1 68412.m07956 arginine/serine-rich splicing factor RSp41 |
| Match: At4g25500.1 |
score: 62.77 |
e-value: 1.9e-10 |
Identity: 69.44% |
Span: 108bp (14.9%) |
Frame: 1 |
| At4g25500.1 68411.m03344 arginine/serine-rich splicing factor RSp40 contains EST gb:T45156, H3766800 |
| Match: At3g61860.1 |
score: 58.54 |
e-value: 3.6e-09 |
Identity: 69.44% |
Span: 108bp (14.9%) |
Frame: 1 |
| At3g61860.1 68410.m06419 arginine/serine-rich splicing factor, atRSp31 |
| Match: At2g46610.1 |
score: 51.6 |
e-value: 4.4e-07 |
Identity: 58.33% |
Span: 108bp (14.9%) |
Frame: 1 |
| At2g46610.1 68409.m05251 arginine/serine-rich splicing factor RSP31, putative |
| Match: At4g02430.1 |
score: 36.96 |
e-value: 0.011 |
Identity: 48.48% |
Span: 99bp (13.6%) |
Frame: 1 |
| At4g02430.1 68411.m00300 arginine/serine-rich splicing factor (atSRp34), putative cDNA NCBI_gi:15810292 supports a tr... |
| Match: At4g02430.2 |
score: 36.96 |
e-value: 0.011 |
Identity: 48.48% |
Span: 99bp (13.6%) |
Frame: 1 |
| At4g02430.2 68411.m00301 arginine/serine-rich splicing factor (atSRp34), putative cDNA NCBI_gi:15810292 supports a tr... |
| Match: At1g02840.1 |
score: 36.58 |
e-value: 0.015 |
Identity: 45.45% |
Span: 99bp (13.6%) |
Frame: 1 |
| At1g02840.1 68408.m08866 pre-mRNA splicing factor SF2 (SR1 protein) |
| Match: At1g02840.2 |
score: 36.58 |
e-value: 0.015 |
Identity: 45.45% |
Span: 99bp (13.6%) |
Frame: 1 |
| At1g02840.2 68408.m08867 pre-mRNA splicing factor SF2 (SR1 protein) |
| Match: At1g02840.3 |
score: 36.58 |
e-value: 0.015 |
Identity: 45.45% |
Span: 99bp (13.6%) |
Frame: 1 |
| At1g02840.3 68408.m08868 pre-mRNA splicing factor SF2 (SR1 protein) |
| Match: At2g37340.1 |
score: 35.04 |
e-value: 0.042 |
Identity: 51.61% |
Span: 93bp (12.8%) |
Frame: 1 |
| At2g37340.1 68409.m04145 splicing factor RSZ33, putative nearly identical to splicing factor RSZ33 [Arabidopsis thali... |
| Match: At3g53500.2 |
score: 35.04 |
e-value: 0.042 |
Identity: 51.61% |
Span: 93bp (12.8%) |
Frame: 1 |
| At3g53500.2 68410.m05465 splicing factor - like protein splicing factor, arginine/serine-rich 7, Homo sapiens, PIR:A5... |
| Match: At1g09140.1 |
score: 34.65 |
e-value: 0.055 |
Identity: 45.45% |
Span: 99bp (13.6%) |
Frame: 1 |
| At1g09140.1 68408.m00913 arginine/serine-rich splicing factor, atSRp30 SF2/ASF splicing modulator Srp30 |
| Match: At3g49430.1 |
score: 33.88 |
e-value: 0.095 |
Identity: 36.36% |
Span: 99bp (13.6%) |
Frame: 1 |
| At3g49430.1 68410.m05002 arginine/serine-rich splicing factor (atSRp34), putative NULL |
| Match: At2g46610.1 |
score: 33.88 |
e-value: 1.5e-05 |
Identity: 52% |
Span: 75bp (10.3%) |
Frame: 3 |
| At2g46610.1 68409.m05251 arginine/serine-rich splicing factor RSP31, putative |
| Match: At5g52040.2 |
score: 33.5 |
e-value: 1.2e-06 |
Identity: 55.88% |
Span: 99bp (13.6%) |
Frame: 2 |
| At5g52040.2 68412.m07957 arginine/serine-rich splicing factor RSp41 |
| Match: At5g52040.1 |
score: 33.5 |
e-value: 1.2e-06 |
Identity: 55.88% |
Span: 99bp (13.6%) |
Frame: 2 |
| At5g52040.1 68412.m07956 arginine/serine-rich splicing factor RSp41 |
| Match: At3g61860.1 |
score: 33.5 |
e-value: 0.00033 |
Identity: 52% |
Span: 75bp (10.3%) |
Frame: 3 |
| At3g61860.1 68410.m06419 arginine/serine-rich splicing factor, atRSp31 |
| Match: At4g25500.1 |
score: 32.34 |
e-value: 2e-07 |
Identity: 56% |
Span: 75bp (10.3%) |
Frame: 3 |
| At4g25500.1 68411.m03344 arginine/serine-rich splicing factor RSp40 contains EST gb:T45156, H3766800 |
| Match: At4g25500.1 |
score: 31.96 |
e-value: 2e-07 |
Identity: 45.45% |
Span: 117bp (16.1%) |
Frame: 2 |
| At4g25500.1 68411.m03344 arginine/serine-rich splicing factor RSp40 contains EST gb:T45156, H3766800 |
| Match: At2g46610.1 |
score: 31.96 |
e-value: 1.5e-05 |
Identity: 50% |
Span: 96bp (13.2%) |
Frame: 2 |
| At2g46610.1 68409.m05251 arginine/serine-rich splicing factor RSP31, putative |
| Match: At5g52040.1 |
score: 31.57 |
e-value: 1.2e-06 |
Identity: 52% |
Span: 75bp (10.3%) |
Frame: 3 |
| At5g52040.1 68412.m07956 arginine/serine-rich splicing factor RSp41 |
| Match: At5g52040.2 |
score: 31.57 |
e-value: 1.2e-06 |
Identity: 52% |
Span: 75bp (10.3%) |
Frame: 3 |
| At5g52040.2 68412.m07957 arginine/serine-rich splicing factor RSp41 |
| Match: At3g61860.1 |
score: 27.72 |
e-value: 0.00033 |
Identity: 46.88% |
Span: 96bp (13.2%) |
Frame: 2 |
| At3g61860.1 68410.m06419 arginine/serine-rich splicing factor, atRSp31 |
| Match: At4g25500.1 |
score: 26.95 |
e-value: 2e-07 |
Identity: 81.25% |
Span: 96bp (13.2%) |
Frame: 1 |
| At4g25500.1 68411.m03344 arginine/serine-rich splicing factor RSp40 contains EST gb:T45156, H3766800 |
| Match: At5g52040.1 |
score: 23.48 |
e-value: 1.2e-06 |
Identity: 75% |
Span: 96bp (13.2%) |
Frame: 1 |
| At5g52040.1 68412.m07956 arginine/serine-rich splicing factor RSp41 |
| Match: At5g52040.2 |
score: 23.48 |
e-value: 1.2e-06 |
Identity: 75% |
Span: 96bp (13.2%) |
Frame: 1 |
| At5g52040.2 68412.m07957 arginine/serine-rich splicing factor RSp41 |
|
