| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|224071293|ref|XP_002303389.1| |
score: 115 |
e-value: 6e-24 |
Identity: 71.6% |
Span: 234bp (32.1%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222840821|gb|EEE78368.1| predicted protein [Populus trichocarpa] |
| Match: gi|255584886|ref|XP_002533158.1| |
score: 115 |
e-value: 6e-24 |
Identity: 74.07% |
Span: 234bp (32.1%) |
Frame: 2 |
| Root phototropism protein, putative [Ricinus communis] >gi223527030|gb|EEF29217.1| Root phototropism protein, putativ... |
| Match: gi|147772913|emb|CAN71562.1| |
score: 114 |
e-value: 8e-24 |
Identity: 71.6% |
Span: 234bp (32.1%) |
Frame: 2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|225438956|ref|XP_002284242.1| |
score: 114 |
e-value: 8e-24 |
Identity: 71.6% |
Span: 234bp (32.1%) |
Frame: 2 |
| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| Match: gi|225438958|ref|XP_002284250.1| |
score: 114 |
e-value: 8e-24 |
Identity: 71.6% |
Span: 234bp (32.1%) |
Frame: 2 |
| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| Match: gi|270250536|emb|CBI33715.1| |
score: 114 |
e-value: 8e-24 |
Identity: 71.6% |
Span: 234bp (32.1%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|51536494|gb|AAU05485.1| |
score: 103 |
e-value: 2e-28 |
Identity: 74.63% |
Span: 198bp (27.2%) |
Frame: 2 |
| At5g67385 [Arabidopsis thaliana] >gi53850509|gb|AAU95431.1| At5g67385 [Arabidopsis thaliana] |
| Match: gi|79579427|ref|NP_680473.2| |
score: 103 |
e-value: 2e-28 |
Identity: 74.63% |
Span: 198bp (27.2%) |
Frame: 2 |
| protein binding / signal transducer [Arabidopsis thaliana] |
| Match: gi|270227068|emb|CBI15801.1| |
score: 90.5 |
e-value: 5e-24 |
Identity: 59.09% |
Span: 198bp (27.2%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225434311|ref|XP_002264896.1| |
score: 90.5 |
e-value: 5e-24 |
Identity: 59.09% |
Span: 198bp (27.2%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|110741270|dbj|BAF02185.1| |
score: 87.4 |
e-value: 9e-23 |
Identity: 57.58% |
Span: 198bp (27.2%) |
Frame: 2 |
| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|1946367|gb|AAB63085.1| |
score: 87.4 |
e-value: 9e-23 |
Identity: 57.58% |
Span: 198bp (27.2%) |
Frame: 2 |
| unknown protein [Arabidopsis thaliana] |
| Match: gi|30684610|ref|NP_850147.1| |
score: 87.4 |
e-value: 9e-23 |
Identity: 57.58% |
Span: 198bp (27.2%) |
Frame: 2 |
| RPT2 (ROOT PHOTOTROPISM 2); protein binding [Arabidopsis thaliana] >gi82581610|sp|Q682S0.2|RPT2_ARATH RecName: Full=R... |
| Match: gi|6959488|gb|AAF33112.1|AF181683_1 |
score: 87.4 |
e-value: 9e-23 |
Identity: 57.58% |
Span: 198bp (27.2%) |
Frame: 2 |
| RPT2 [Arabidopsis thaliana] |
| Match: gi|110739769|dbj|BAF01791.1| |
score: 84.7 |
e-value: 5e-22 |
Identity: 56.06% |
Span: 198bp (27.2%) |
Frame: 2 |
| hypothetical protein [Arabidopsis thaliana] >gi110739936|dbj|BAF01873.1| hypothetical protein [Arabidopsis thaliana] ... |
| Match: gi|168022379|ref|XP_001763717.1| |
score: 82 |
e-value: 2e-22 |
Identity: 66.04% |
Span: 159bp (21.8%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162684961|gb|EDQ71359.1| predicted protein [Physcomitrella... |
| Match: gi|168022379|ref|XP_001763717.1| |
score: 50.1 |
e-value: 2e-22 |
Identity: 46.34% |
Span: 123bp (16.9%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162684961|gb|EDQ71359.1| predicted protein [Physcomitrella... |
| Match: gi|51536494|gb|AAU05485.1| |
score: 48.9 |
e-value: 2e-28 |
Identity: 57.5% |
Span: 120bp (16.5%) |
Frame: 1 |
| At5g67385 [Arabidopsis thaliana] >gi53850509|gb|AAU95431.1| At5g67385 [Arabidopsis thaliana] |
| Match: gi|79579427|ref|NP_680473.2| |
score: 48.9 |
e-value: 2e-28 |
Identity: 57.5% |
Span: 120bp (16.5%) |
Frame: 1 |
| protein binding / signal transducer [Arabidopsis thaliana] |
| Match: gi|270227068|emb|CBI15801.1| |
score: 47 |
e-value: 5e-24 |
Identity: 55.56% |
Span: 108bp (14.8%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225434311|ref|XP_002264896.1| |
score: 47 |
e-value: 5e-24 |
Identity: 55.56% |
Span: 108bp (14.8%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|1946367|gb|AAB63085.1| |
score: 45.8 |
e-value: 9e-23 |
Identity: 52.78% |
Span: 108bp (14.8%) |
Frame: 1 |
| unknown protein [Arabidopsis thaliana] |
| Match: gi|30684610|ref|NP_850147.1| |
score: 45.8 |
e-value: 9e-23 |
Identity: 52.78% |
Span: 108bp (14.8%) |
Frame: 1 |
| RPT2 (ROOT PHOTOTROPISM 2); protein binding [Arabidopsis thaliana] >gi82581610|sp|Q682S0.2|RPT2_ARATH RecName: Full=R... |
| Match: gi|6959488|gb|AAF33112.1|AF181683_1 |
score: 45.8 |
e-value: 9e-23 |
Identity: 52.78% |
Span: 108bp (14.8%) |
Frame: 1 |
| RPT2 [Arabidopsis thaliana] |
| Match: gi|110741270|dbj|BAF02185.1| |
score: 45.8 |
e-value: 9e-23 |
Identity: 52.78% |
Span: 108bp (14.8%) |
Frame: 1 |
| hypothetical protein [Arabidopsis thaliana] |
|
| 365 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 25 hits recorded |
| Match: At5G67385.1 |
score: 103 |
e-value: 1e-30 |
Identity: 74.63% |
Span: 198bp (27.2%) |
Frame: 2 |
| signal transducer | chr5:26901980-26904309 FORWARD |
| Match: At5G48800.1 |
score: 87.8 |
e-value: 6e-18 |
Identity: 51.9% |
Span: 228bp (31.3%) |
Frame: 2 |
| phototropic-responsive NPH3 family protein | chr5:19804107-19806229 FORWARD |
| Match: At2G30520.2 |
score: 87.4 |
e-value: 8e-18 |
Identity: 57.58% |
Span: 198bp (27.2%) |
Frame: 2 |
| Symbols: RPT2 | RPT2 (ROOT PHOTOTROPISM 2); protein binding | chr2:13009997-13012230 REVERSE |
| Match: At2G30520.1 |
score: 87.4 |
e-value: 4e-25 |
Identity: 57.58% |
Span: 198bp (27.2%) |
Frame: 2 |
| Symbols: RPT2 | RPT2 (ROOT PHOTOTROPISM 2); protein binding | chr2:13009997-13012650 REVERSE |
| Match: At2G30520.3 |
score: 87.4 |
e-value: 8e-18 |
Identity: 57.58% |
Span: 198bp (27.2%) |
Frame: 2 |
| Symbols: RPT2 | RPT2 (ROOT PHOTOTROPISM 2) | chr2:13009997-13012230 REVERSE |
| Match: At3G49970.1 |
score: 83.6 |
e-value: 1e-16 |
Identity: 55.7% |
Span: 228bp (31.3%) |
Frame: 2 |
| phototropic-responsive protein, putative | chr3:18538201-18540051 REVERSE |
| Match: At5G64330.1 |
score: 77.8 |
e-value: 1e-19 |
Identity: 53.03% |
Span: 198bp (27.2%) |
Frame: 2 |
| Symbols: JK218, RPT3, NPH3 | NPH3 (NON-PHOTOTROPIC HYPOCOTYL 3); signal transducer | chr5:25744794-25747451 FORWARD |
| Match: At3G08660.1 |
score: 72.4 |
e-value: 9e-18 |
Identity: 53.03% |
Span: 198bp (27.2%) |
Frame: 2 |
| phototropic-responsive protein, putative | chr3:2631136-2633172 FORWARD |
| Match: At1G30440.1 |
score: 71.2 |
e-value: 3e-18 |
Identity: 52.63% |
Span: 171bp (23.5%) |
Frame: 2 |
| phototropic-responsive NPH3 family protein | chr1:10759457-10762181 FORWARD |
| Match: At5G03250.1 |
score: 70.9 |
e-value: 1e-17 |
Identity: 47.06% |
Span: 198bp (27.2%) |
Frame: 2 |
| phototropic-responsive NPH3 family protein | chr5:774590-776854 FORWARD |
| Match: At4G31820.1 |
score: 69.7 |
e-value: 2e-17 |
Identity: 50% |
Span: 198bp (27.2%) |
Frame: 2 |
| phototropic-responsive NPH3 family protein | chr4:15390794-15393633 REVERSE |
| Match: At1G67900.1 |
score: 67.8 |
e-value: 1e-17 |
Identity: 43.42% |
Span: 228bp (31.3%) |
Frame: 2 |
| phototropic-responsive NPH3 family protein | chr1:25471400-25473551 FORWARD |
| Match: At1G67900.2 |
score: 67.8 |
e-value: 1e-17 |
Identity: 43.42% |
Span: 228bp (31.3%) |
Frame: 2 |
| phototropic-responsive NPH3 family protein | chr1:25471400-25473551 FORWARD |
| Match: At5G67440.1 |
score: 64.3 |
e-value: 1e-15 |
Identity: 51.72% |
Span: 174bp (23.9%) |
Frame: 2 |
| phototropic-responsive NPH3 family protein | chr5:26930173-26932132 REVERSE |
| Match: At2G23050.1 |
score: 62.8 |
e-value: 6e-16 |
Identity: 43.55% |
Span: 186bp (25.5%) |
Frame: 2 |
| phototropic-responsive NPH3 family protein | chr2:9817865-9819548 FORWARD |
| Match: At5G67385.1 |
score: 48.9 |
e-value: 1e-30 |
Identity: 57.5% |
Span: 120bp (16.5%) |
Frame: 1 |
| signal transducer | chr5:26901980-26904309 FORWARD |
| Match: At2G30520.1 |
score: 45.8 |
e-value: 4e-25 |
Identity: 52.78% |
Span: 108bp (14.8%) |
Frame: 1 |
| Symbols: RPT2 | RPT2 (ROOT PHOTOTROPISM 2); protein binding | chr2:13009997-13012650 REVERSE |
| Match: At1G67900.2 |
score: 40.4 |
e-value: 1e-17 |
Identity: 47.62% |
Span: 120bp (16.5%) |
Frame: 1 |
| phototropic-responsive NPH3 family protein | chr1:25471400-25473551 FORWARD |
| Match: At1G67900.1 |
score: 40.4 |
e-value: 1e-17 |
Identity: 47.62% |
Span: 120bp (16.5%) |
Frame: 1 |
| phototropic-responsive NPH3 family protein | chr1:25471400-25473551 FORWARD |
| Match: At2G23050.1 |
score: 39.7 |
e-value: 6e-16 |
Identity: 41.67% |
Span: 108bp (14.8%) |
Frame: 1 |
| phototropic-responsive NPH3 family protein | chr2:9817865-9819548 FORWARD |
| Match: At1G30440.1 |
score: 38.9 |
e-value: 3e-18 |
Identity: 57.69% |
Span: 78bp (10.7%) |
Frame: 1 |
| phototropic-responsive NPH3 family protein | chr1:10759457-10762181 FORWARD |
| Match: At4G31820.1 |
score: 38.1 |
e-value: 2e-17 |
Identity: 61.54% |
Span: 78bp (10.7%) |
Frame: 1 |
| phototropic-responsive NPH3 family protein | chr4:15390794-15393633 REVERSE |
| Match: At5G03250.1 |
score: 37.4 |
e-value: 1e-17 |
Identity: 61.54% |
Span: 78bp (10.7%) |
Frame: 1 |
| phototropic-responsive NPH3 family protein | chr5:774590-776854 FORWARD |
| Match: At5G64330.1 |
score: 37 |
e-value: 1e-19 |
Identity: 51.85% |
Span: 81bp (11.1%) |
Frame: 1 |
| Symbols: JK218, RPT3, NPH3 | NPH3 (NON-PHOTOTROPIC HYPOCOTYL 3); signal transducer | chr5:25744794-25747451 FORWARD |
| Match: At3G08660.1 |
score: 36.2 |
e-value: 9e-18 |
Identity: 50% |
Span: 120bp (16.5%) |
Frame: 1 |
| phototropic-responsive protein, putative | chr3:2631136-2633172 FORWARD |
|
| 19 lower scoring hits censored -- only 25 best hits are stored. |
| swissprot [blastx] | Showing best 7 hits recorded |
| Match: Q9FKB6 |
score: 87.8 |
e-value: 6e-17 |
Identity: 51.9% |
Span: 228bp (31.3%) |
Frame: 2 |
| BTB/POZ domain-containing protein At5g48800 OS=Arabidopsis thaliana GN=At5g48800 PE=1 SV=1 |
| Match: Q682S0 |
score: 87.4 |
e-value: 5e-24 |
Identity: 57.58% |
Span: 198bp (27.2%) |
Frame: 2 |
| Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=2 |
| Match: Q9FMF5 |
score: 77.8 |
e-value: 2e-18 |
Identity: 53.03% |
Span: 198bp (27.2%) |
Frame: 2 |
| Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1 |
| Match: Q9S9Q9 |
score: 71.2 |
e-value: 4e-17 |
Identity: 52.63% |
Span: 171bp (23.5%) |
Frame: 2 |
| BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2 |
| Match: Q682S0 |
score: 45.8 |
e-value: 5e-24 |
Identity: 52.78% |
Span: 108bp (14.8%) |
Frame: 1 |
| Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=2 |
| Match: Q9S9Q9 |
score: 38.9 |
e-value: 4e-17 |
Identity: 57.69% |
Span: 78bp (10.7%) |
Frame: 1 |
| BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2 |
| Match: Q9FMF5 |
score: 37 |
e-value: 2e-18 |
Identity: 51.85% |
Span: 81bp (11.1%) |
Frame: 1 |
| Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1 |
|
