| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|225459625|ref|XP_002285874.1| |
score: 392 |
e-value: 2e-107 |
Identity: 93.75% |
Span: 621bp (84.7%) |
Frame: 1 |
| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] >gi270252373|emb|CBI18984.1| unnamed protein product [Viti... |
| Match: gi|147858312|emb|CAN83520.1| |
score: 390 |
e-value: 9e-107 |
Identity: 93.27% |
Span: 621bp (84.7%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|255558610|ref|XP_002520330.1| |
score: 387 |
e-value: 6e-106 |
Identity: 90.87% |
Span: 621bp (84.7%) |
Frame: 1 |
| replication factor C / DNA polymerase III gamma-tau subunit, putative [Ricinus communis] >gi223540549|gb|EEF42116.1| ... |
| Match: gi|18395021|ref|NP_564148.1| |
score: 385 |
e-value: 2e-105 |
Identity: 92.31% |
Span: 621bp (84.7%) |
Frame: 1 |
| emb1968 (embryo defective 1968); ATP binding / ATPase/ DNA binding / DNA clamp loader/ nucleoside-triphosphatase/ nuc... |
| Match: gi|5263320|gb|AAD41422.1|AC007727_11 |
score: 385 |
e-value: 2e-105 |
Identity: 92.31% |
Span: 621bp (84.7%) |
Frame: 1 |
| Similar to gbM87339 replication factor C, 37-kDa subunit from Homo sapiens and is a member of PF|00004 ATPases associ... |
| Match: gi|224084964|ref|XP_002307456.1| |
score: 382 |
e-value: 3e-104 |
Identity: 89.42% |
Span: 621bp (84.7%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222856905|gb|EEE94452.1| predicted protein [Populus trichocarpa] |
| Match: gi|217073528|gb|ACJ85124.1| |
score: 376 |
e-value: 1e-102 |
Identity: 87.5% |
Span: 621bp (84.7%) |
Frame: 1 |
| unknown [Medicago truncatula] |
| Match: gi|242042039|ref|XP_002468414.1| |
score: 371 |
e-value: 5e-101 |
Identity: 86.47% |
Span: 621bp (84.7%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_01g045530 [Sorghum bicolor] >gi241922268|gb|EER95412.1| hypothetical protein SORBIDRA... |
| Match: gi|242082974|ref|XP_002441912.1| |
score: 368 |
e-value: 3e-100 |
Identity: 85.51% |
Span: 621bp (84.7%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_08g004780 [Sorghum bicolor] >gi241942605|gb|EES15750.1| hypothetical protein SORBIDRA... |
| Match: gi|115487618|ref|NP_001066296.1| |
score: 366 |
e-value: 1e-99 |
Identity: 85.99% |
Span: 621bp (84.7%) |
Frame: 1 |
| Os12g0176500 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|10798806|dbj|BAB16441.1| |
score: 366 |
e-value: 1e-99 |
Identity: 85.99% |
Span: 621bp (84.7%) |
Frame: 1 |
| replication factor C 37 kDa subunit [Oryza sativa Japonica Group] >gi77553810|gb|ABA96606.1| Activator 1 37 kDa subun... |
| Match: gi|226492916|ref|NP_001148581.1| |
score: 365 |
e-value: 3e-99 |
Identity: 85.02% |
Span: 621bp (84.7%) |
Frame: 1 |
| replication factor C subunit 2 [Zea mays] >gi195620566|gb|ACG32113.1| replication factor C subunit 2 [Zea mays] |
| Match: gi|194700788|gb|ACF84478.1| |
score: 365 |
e-value: 3e-99 |
Identity: 85.02% |
Span: 621bp (84.7%) |
Frame: 1 |
| unknown [Zea mays] >gi194706416|gb|ACF87292.1| unknown [Zea mays] |
| Match: gi|225459627|ref|XP_002285875.1| |
score: 362 |
e-value: 2e-98 |
Identity: 88.46% |
Span: 621bp (84.7%) |
Frame: 1 |
| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| Match: gi|30687479|ref|NP_849695.1| |
score: 359 |
e-value: 2e-97 |
Identity: 87.98% |
Span: 621bp (84.7%) |
Frame: 1 |
| emb1968 (embryo defective 1968); ATP binding / ATPase/ DNA binding / DNA clamp loader/ nucleoside-triphosphatase/ nuc... |
| Match: gi|116785245|gb|ABK23650.1| |
score: 353 |
e-value: 7e-96 |
Identity: 85.58% |
Span: 621bp (84.7%) |
Frame: 1 |
| unknown [Picea sitchensis] >gi224286688|gb|ACN41047.1| unknown [Picea sitchensis] |
| Match: gi|168030360|ref|XP_001767691.1| |
score: 352 |
e-value: 3e-95 |
Identity: 83.57% |
Span: 621bp (84.7%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162681011|gb|EDQ67442.1| predicted protein [Physcomitrella... |
| Match: gi|224106792|ref|XP_002333632.1| |
score: 326 |
e-value: 2e-87 |
Identity: 85.34% |
Span: 570bp (77.8%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222837855|gb|EEE76220.1| predicted protein [Populus trichocarpa] |
| Match: gi|159476624|ref|XP_001696411.1| |
score: 302 |
e-value: 3e-80 |
Identity: 73.63% |
Span: 603bp (82.3%) |
Frame: 1 |
| DNA replication factor C complex subunit 4 [Chlamydomonas reinhardtii] >gi158282636|gb|EDP08388.1| DNA replication fa... |
| Match: gi|255088619|ref|XP_002506232.1| |
score: 288 |
e-value: 4e-76 |
Identity: 71.64% |
Span: 603bp (82.3%) |
Frame: 1 |
| predicted protein [Micromonas sp. RCC299] >gi226521503|gb|ACO67490.1| predicted protein [Micromonas sp. RCC299] |
| Match: gi|226461018|gb|EEH58311.1| |
score: 288 |
e-value: 4e-76 |
Identity: 70.15% |
Span: 603bp (82.3%) |
Frame: 1 |
| predicted protein [Micromonas pusilla CCMP1545] |
| Match: gi|290981375|ref|XP_002673406.1| |
score: 276 |
e-value: 2e-72 |
Identity: 66.34% |
Span: 606bp (82.7%) |
Frame: 1 |
| predicted protein [Naegleria gruberi] >gi284086989|gb|EFC40662.1| predicted protein [Naegleria gruberi] |
| Match: gi|145350673|ref|XP_001419724.1| |
score: 270 |
e-value: 8e-71 |
Identity: 64.85% |
Span: 606bp (82.7%) |
Frame: 1 |
| predicted protein [Ostreococcus lucimarinus CCE9901] >gi144579956|gb|ABO98017.1| predicted protein [Ostreococcus luci... |
| Match: gi|116059556|emb|CAL55263.1| |
score: 268 |
e-value: 5e-70 |
Identity: 65.33% |
Span: 597bp (81.4%) |
Frame: 1 |
| replication factor C 37 kDa subunit (ISS) [Ostreococcus tauri] |
| Match: gi|145614662|ref|XP_361944.2| |
score: 267 |
e-value: 7e-70 |
Identity: 62.62% |
Span: 633bp (86.4%) |
Frame: 1 |
| conserved hypothetical protein [Magnaporthe grisea 70-15] >gi145021569|gb|EDK05698.1| conserved hypothetical protein ... |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 10 hits recorded |
| Match: At1G21690.1 |
score: 385 |
e-value: 1e-107 |
Identity: 92.31% |
Span: 621bp (84.7%) |
Frame: 1 |
| Symbols: EMB1968 | EMB1968 (EMBRYO DEFECTIVE 1968); ATPase | chr1:7615664-7618351 FORWARD |
| Match: At1G21690.2 |
score: 359 |
e-value: 1e-99 |
Identity: 87.98% |
Span: 621bp (84.7%) |
Frame: 1 |
| Symbols: EMB1968 | EMB1968 (EMBRYO DEFECTIVE 1968); ATPase | chr1:7615664-7618351 FORWARD |
| Match: At1G77470.1 |
score: 184 |
e-value: 6e-47 |
Identity: 45.07% |
Span: 639bp (87.2%) |
Frame: 1 |
| replication factor C 36 kDA, putative | chr1:29117088-29119217 REVERSE |
| Match: At1G63160.1 |
score: 173 |
e-value: 1e-43 |
Identity: 48.02% |
Span: 600bp (81.9%) |
Frame: 1 |
| replication factor C 40 kDa, putative | chr1:23425733-23427436 REVERSE |
| Match: At5G27740.1 |
score: 106 |
e-value: 1e-23 |
Identity: 30.23% |
Span: 549bp (74.9%) |
Frame: 1 |
| nucleoside-triphosphatase/ nucleotide binding | chr5:9823835-9826873 FORWARD |
| Match: At4G24790.1 |
score: 73.2 |
e-value: 2e-13 |
Identity: 25.73% |
Span: 585bp (79.8%) |
Frame: 1 |
| ATP binding / DNA-directed DNA polymerase | chr4:12778232-12781041 FORWARD |
| Match: At5G22010.1 |
score: 72.4 |
e-value: 3e-13 |
Identity: 24.9% |
Span: 612bp (83.5%) |
Frame: 1 |
| AAA-type ATPase family protein / BRCT domain-containing protein | chr5:7280635-7287040 REVERSE |
| Match: At5G45720.1 |
score: 70.9 |
e-value: 8e-13 |
Identity: 25.22% |
Span: 657bp (89.6%) |
Frame: 1 |
| ATP binding / DNA-directed DNA polymerase/ nucleoside-triphosphatase/ nucleotide binding | chr5:18560565-18563856 RE... |
| Match: At1G14460.1 |
score: 70.1 |
e-value: 1e-12 |
Identity: 25.52% |
Span: 651bp (88.8%) |
Frame: 1 |
| DNA polymerase-related | chr1:4948957-4952745 REVERSE |
| Match: At2G02480.1 |
score: 68.9 |
e-value: 3e-12 |
Identity: 26.17% |
Span: 585bp (79.8%) |
Frame: 1 |
| Symbols: STI | STI (STICHEL); ATP binding / DNA-directed DNA polymerase | chr2:661092-665336 FORWARD |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: Q99J62 |
score: 259 |
e-value: 1e-68 |
Identity: 63.64% |
Span: 594bp (81.0%) |
Frame: 1 |
| Replication factor C subunit 4 OS=Mus musculus GN=Rfc4 PE=1 SV=1 |
| Match: P35249 |
score: 259 |
e-value: 1e-68 |
Identity: 63.13% |
Span: 594bp (81.0%) |
Frame: 1 |
| Replication factor C subunit 4 OS=Homo sapiens GN=RFC4 PE=1 SV=2 |
| Match: P40348 |
score: 250 |
e-value: 8e-66 |
Identity: 58.85% |
Span: 618bp (84.3%) |
Frame: 1 |
| Replication factor C subunit 2 OS=Saccharomyces cerevisiae GN=RFC2 PE=1 SV=1 |
| Match: Q09843 |
score: 247 |
e-value: 6e-65 |
Identity: 56.28% |
Span: 645bp (88.0%) |
Frame: 1 |
| Replication factor C subunit 2 OS=Schizosaccharomyces pombe GN=rfc2 PE=1 SV=1 |
| Match: P0C7N7 |
score: 243 |
e-value: 9e-64 |
Identity: 56.88% |
Span: 597bp (81.4%) |
Frame: 1 |
| Replication factor C subunit 2 OS=Phaeosphaeria nodorum GN=RFC2 PE=3 SV=1 |
| Match: Q54MD4 |
score: 239 |
e-value: 1e-62 |
Identity: 59.11% |
Span: 606bp (82.7%) |
Frame: 1 |
| Probable replication factor C subunit 4 OS=Dictyostelium discoideum GN=rfc4 PE=3 SV=1 |
| Match: O28219 |
score: 219 |
e-value: 1e-56 |
Identity: 54.81% |
Span: 621bp (84.7%) |
Frame: 1 |
| Replication factor C small subunit OS=Archaeoglobus fulgidus GN=rfcS PE=1 SV=1 |
| Match: P53016 |
score: 209 |
e-value: 2e-53 |
Identity: 51.78% |
Span: 591bp (80.6%) |
Frame: 1 |
| Replication factor C subunit 4 OS=Caenorhabditis elegans GN=rfc-4 PE=1 SV=1 |
| Match: Q975D3 |
score: 207 |
e-value: 4e-53 |
Identity: 50.24% |
Span: 615bp (83.9%) |
Frame: 1 |
| Replication factor C small subunit OS=Sulfolobus tokodaii GN=rfcS PE=3 SV=1 |
| Match: Q9YBS7 |
score: 205 |
e-value: 2e-52 |
Identity: 53.81% |
Span: 591bp (80.6%) |
Frame: 1 |
| Replication factor C small subunit OS=Aeropyrum pernix GN=rfcS PE=3 SV=3 |
| Match: A4WGV2 |
score: 204 |
e-value: 4e-52 |
Identity: 49.06% |
Span: 633bp (86.4%) |
Frame: 1 |
| Replication factor C small subunit 1 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rfcS1 PE=3 SV=1 |
| Match: A3DNV9 |
score: 204 |
e-value: 6e-52 |
Identity: 50.24% |
Span: 633bp (86.4%) |
Frame: 1 |
| Replication factor C small subunit OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rfcS PE=3 SV=1 |
| Match: A1RWU7 |
score: 203 |
e-value: 8e-52 |
Identity: 50.99% |
Span: 603bp (82.3%) |
Frame: 1 |
| Replication factor C small subunit OS=Thermofilum pendens (strain Hrk 5) GN=rfcS PE=3 SV=1 |
| Match: A1RSA2 |
score: 203 |
e-value: 1e-51 |
Identity: 48.58% |
Span: 633bp (86.4%) |
Frame: 1 |
| Replication factor C small subunit 1 OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rfcS1 PE=3 SV=1 |
| Match: Q8ZYK4 |
score: 202 |
e-value: 2e-51 |
Identity: 48.58% |
Span: 633bp (86.4%) |
Frame: 1 |
| Replication factor C small subunit 1 OS=Pyrobaculum aerophilum GN=rfcS1 PE=3 SV=1 |
| Match: Q4JAB0 |
score: 201 |
e-value: 3e-51 |
Identity: 49.26% |
Span: 609bp (83.1%) |
Frame: 1 |
| Replication factor C small subunit OS=Sulfolobus acidocaldarius GN=rfcS PE=3 SV=1 |
| Match: A3MS28 |
score: 200 |
e-value: 7e-51 |
Identity: 48.11% |
Span: 633bp (86.4%) |
Frame: 1 |
| Replication factor C small subunit OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rfcS PE=3 SV=1 |
| Match: Q9UXF5 |
score: 200 |
e-value: 9e-51 |
Identity: 49.27% |
Span: 615bp (83.9%) |
Frame: 1 |
| Replication factor C small subunit OS=Sulfolobus solfataricus GN=rfcS PE=1 SV=1 |
| Match: P34429 |
score: 198 |
e-value: 3e-50 |
Identity: 46.95% |
Span: 627bp (85.5%) |
Frame: 1 |
| Probable replication factor C subunit 5 OS=Caenorhabditis elegans GN=F44B9.8 PE=1 SV=3 |
| Match: Q46C63 |
score: 198 |
e-value: 3e-50 |
Identity: 50.25% |
Span: 591bp (80.6%) |
Frame: 1 |
| Replication factor C small subunit OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rfcS PE=3 SV=1 |
| Match: P60374 |
score: 197 |
e-value: 4e-50 |
Identity: 50% |
Span: 615bp (83.9%) |
Frame: 1 |
| Replication factor C small subunit OS=Nanoarchaeum equitans GN=rfcS PE=3 SV=1 |
| Match: A1RV38 |
score: 196 |
e-value: 1e-49 |
Identity: 50.51% |
Span: 591bp (80.6%) |
Frame: 1 |
| Replication factor C small subunit 2 OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rfcS2 PE=3 SV=1 |
| Match: Q8TSX5 |
score: 195 |
e-value: 2e-49 |
Identity: 48.99% |
Span: 591bp (80.6%) |
Frame: 1 |
| Replication factor C small subunit OS=Methanosarcina acetivorans GN=rfcS PE=3 SV=1 |
| Match: O14003 |
score: 195 |
e-value: 3e-49 |
Identity: 47.62% |
Span: 630bp (85.9%) |
Frame: 1 |
| Replication factor C subunit 3 OS=Schizosaccharomyces pombe GN=rfc3 PE=1 SV=2 |
| Match: Q54ST4 |
score: 194 |
e-value: 5e-49 |
Identity: 49% |
Span: 600bp (81.9%) |
Frame: 1 |
| Probable replication factor C subunit 5 OS=Dictyostelium discoideum GN=rfc5 PE=3 SV=1 |
|
| 96 lower scoring hits censored -- only 25 best hits are stored. |
