| arabidopsis/peptide [blastx] | Showing best 12 hits recorded |
| Match: At3G51950.2 |
score: 82.8 |
e-value: 2e-16 |
Identity: 68.85% |
Span: 183bp (24.7%) |
Frame: 2 |
| RNA binding | chr3:19289222-19291385 REVERSE |
| Match: At3G51950.1 |
score: 82.8 |
e-value: 2e-16 |
Identity: 68.85% |
Span: 183bp (24.7%) |
Frame: 2 |
| zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein | chr3:19289222-19291385 REV... |
| Match: At3G63450.2 |
score: 78.2 |
e-value: 5e-15 |
Identity: 68.97% |
Span: 174bp (23.5%) |
Frame: 2 |
| RNA binding | chr3:23438166-23439839 REVERSE |
| Match: At3G63450.1 |
score: 78.2 |
e-value: 5e-15 |
Identity: 68.97% |
Span: 174bp (23.5%) |
Frame: 2 |
| RNA binding | chr3:23438166-23439839 REVERSE |
| Match: At3G52980.1 |
score: 60.1 |
e-value: 1e-09 |
Identity: 30.41% |
Span: 621bp (83.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:19656638-19657940 FORWARD |
| Match: At2G05160.1 |
score: 53.9 |
e-value: 9e-08 |
Identity: 48.28% |
Span: 171bp (23.1%) |
Frame: 2 |
| zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein | chr2:1859008-1860928 REVERSE |
| Match: At3G21100.2 |
score: 53.5 |
e-value: 1e-07 |
Identity: 28.36% |
Span: 519bp (70.1%) |
Frame: 2 |
| RNA binding | chr3:7399168-7401876 FORWARD |
| Match: At3G21100.1 |
score: 53.5 |
e-value: 1e-07 |
Identity: 28.36% |
Span: 519bp (70.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:7399168-7401876 FORWARD |
| Match: At1G51520.1 |
score: 48.1 |
e-value: 5e-06 |
Identity: 34.48% |
Span: 174bp (23.5%) |
Frame: 2 |
| nucleic acid binding / nucleotide binding | chr1:19110457-19112201 FORWARD |
| Match: At1G51520.2 |
score: 48.1 |
e-value: 5e-06 |
Identity: 34.48% |
Span: 174bp (23.5%) |
Frame: 2 |
| nucleic acid binding | chr1:19110457-19112761 FORWARD |
| Match: At1G51530.1 |
score: 45.1 |
e-value: 4e-05 |
Identity: 52.38% |
Span: 126bp (17.0%) |
Frame: 2 |
| | Symbol: None | RNA recognition motif (RRM)-containing protein | chr1:19113522-19115820 FORWARD | Aliases: F5D21.14,... |
| Match: At5G12440.1 |
score: 44.7 |
e-value: 6e-05 |
Identity: 43.14% |
Span: 153bp (20.7%) |
Frame: 2 |
| zinc finger (CCCH-type) family protein | chr5:4035892-4038311 REVERSE |
|
| 4 lower scoring hits censored -- only 12 best hits are stored. |
| genbank/nr [blastx] | Showing best 22 hits recorded |
| Match: gi|15231090|ref|NP_190763.1| |
score: 82.8 |
e-value: 1e-14 |
Identity: 68.85% |
Span: 183bp (24.7%) |
Frame: 2 |
| zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi793... |
| Match: gi|21594547|gb|AAM66020.1| |
score: 82.8 |
e-value: 1e-14 |
Identity: 68.85% |
Span: 183bp (24.7%) |
Frame: 2 |
| unknown [Arabidopsis thaliana] |
| Match: gi|19423979|gb|AAL87320.1| |
score: 82.8 |
e-value: 1e-14 |
Identity: 68.85% |
Span: 183bp (24.7%) |
Frame: 2 |
| unknown protein [Arabidopsis thaliana] |
| Match: gi|46518429|gb|AAS99696.1| |
score: 78.2 |
e-value: 3e-13 |
Identity: 68.97% |
Span: 174bp (23.5%) |
Frame: 2 |
| gi|46518429|gb|AAS99696.1| At3g63450 [Arabidopsis thaliana] |
| Match: gi|7573328|emb|CAB87798.1| |
score: 78.2 |
e-value: 3e-13 |
Identity: 68.97% |
Span: 174bp (23.5%) |
Frame: 2 |
| putative protein [Arabidopsis thaliana] |
| Match: gi|38230504|gb|AAR14273.1| |
score: 77.8 |
e-value: 4e-13 |
Identity: 66.67% |
Span: 180bp (24.3%) |
Frame: 2 |
| predicted protein [Populus tremula x Populus alba] |
| Match: gi|108707942|gb|ABF95737.1| |
score: 75.1 |
e-value: 3e-12 |
Identity: 62.3% |
Span: 183bp (24.7%) |
Frame: 2 |
| Zinc |
| Match: gi|108707945|gb|ABF95740.1| |
score: 75.1 |
e-value: 3e-12 |
Identity: 62.3% |
Span: 183bp (24.7%) |
Frame: 2 |
| RNA |
| Match: gi|108707943|gb|ABF95738.1| |
score: 75.1 |
e-value: 3e-12 |
Identity: 62.3% |
Span: 183bp (24.7%) |
Frame: 2 |
| Zinc |
| Match: gi|50940067|ref|XP_479561.1| |
score: 74.7 |
e-value: 4e-12 |
Identity: 59.02% |
Span: 183bp (24.7%) |
Frame: 2 |
| gi|50940067|ref|XP_479561.1| putative DAZ associated protein 1 [Oryza sativa (japonica cultivar-group)] >gi|33146675|... |
| Match: gi|38230504|gb|AAR14273.1| |
score: 67 |
e-value: 8e-10 |
Identity: 42.74% |
Span: 321bp (43.4%) |
Frame: 2 |
| predicted protein [Populus tremula x Populus alba] |
| Match: gi|15231722|ref|NP_190866.1| |
score: 60.1 |
e-value: 9e-08 |
Identity: 30.41% |
Span: 621bp (83.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi7529722|emb|CAB86902.1| putative protein [Ar... |
| Match: gi|108707942|gb|ABF95737.1| |
score: 58.2 |
e-value: 3e-07 |
Identity: 57.45% |
Span: 141bp (19.1%) |
Frame: 2 |
| Zinc |
| Match: gi|108707943|gb|ABF95738.1| |
score: 58.2 |
e-value: 3e-07 |
Identity: 57.45% |
Span: 141bp (19.1%) |
Frame: 2 |
| Zinc |
| Match: gi|26453236|dbj|BAC43691.1| |
score: 57.8 |
e-value: 5e-07 |
Identity: 45.76% |
Span: 177bp (23.9%) |
Frame: 2 |
| gi|26453236|dbj|BAC43691.1| unknown protein [Arabidopsis thaliana] gi|27311807|gb|AAO00869.1| putative protein [Arabi... |
| Match: gi|108707945|gb|ABF95740.1| |
score: 56.6 |
e-value: 1e-06 |
Identity: 40% |
Span: 216bp (29.2%) |
Frame: 2 |
| RNA |
| Match: gi|77552901|gb|ABA95697.1| |
score: 55.1 |
e-value: 3e-06 |
Identity: 46.55% |
Span: 174bp (23.5%) |
Frame: 2 |
| gi|77552901|gb|ABA95697.1| hypothetical protein LOC_Os12g02970 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|50940067|ref|XP_479561.1| |
score: 54.7 |
e-value: 4e-06 |
Identity: 41.18% |
Span: 243bp (32.8%) |
Frame: 2 |
| gi|50940067|ref|XP_479561.1| putative DAZ associated protein 1 [Oryza sativa (japonica cultivar-group)] >gi|33146675|... |
| Match: gi|15224480|ref|NP_178588.1| |
score: 53.9 |
e-value: 7e-06 |
Identity: 48.28% |
Span: 171bp (23.1%) |
Frame: 2 |
| zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi753... |
| Match: gi|22331232|ref|NP_188747.2| |
score: 53.5 |
e-value: 9e-06 |
Identity: 28.36% |
Span: 519bp (70.1%) |
Frame: 2 |
| gi|22331232|ref|NP_188747.2| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
| Match: gi|77548504|gb|ABA91301.1| |
score: 53.5 |
e-value: 9e-06 |
Identity: 44.83% |
Span: 174bp (23.5%) |
Frame: 2 |
| gi|77548504|gb|ABA91301.1| hypothetical protein LOC_Os11g03220 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|11994270|dbj|BAB01453.1| |
score: 53.5 |
e-value: 9e-06 |
Identity: 28.36% |
Span: 519bp (70.1%) |
Frame: 2 |
| unnamed protein product [Arabidopsis thaliana] |
|
| 10 lower scoring hits censored -- only 22 best hits are stored. |