| genbank/nr [blastx] | Showing best 64 hits recorded |
| Match: gi|15222202|ref|NP_172164.1| |
score: 164.1 |
e-value: 2.3e-39 |
Identity: 62.07% |
Span: 342bp (45.2%) |
Frame: 2 |
| RNA polymerase Rpb7 N-terminal domain-containing protein [Arabidopsis thaliana] >gi7523702|gb|AAF63141.1|AC011001_11 ... |
| Match: gi|42571371|ref|NP_973776.1| |
score: 137.1 |
e-value: 2.9e-31 |
Identity: 61.39% |
Span: 297bp (39.3%) |
Frame: 2 |
| RNA polymerase Rpb7 N-terminal domain-containing protein [Arabidopsis thaliana] |
| Match: gi|34901638|ref|NP_912165.1| |
score: 86.27 |
e-value: 6e-16 |
Identity: 40.87% |
Span: 342bp (45.2%) |
Frame: 2 |
| gi|34901638|ref|NP_912165.1| putative DNA-directed RNA polymerase III subunit 22.9 kDa polypeptide [Oryza sativa (jap... |
| Match: gi|19112860|ref|NP_596068.1| |
score: 74.33 |
e-value: 2.3e-12 |
Identity: 32.06% |
Span: 342bp (45.2%) |
Frame: 2 |
| gi|19112860|ref|NP_596068.1| DNA directed RNA polymerase III subunit [Schizosaccharomyces pombe] gi|7490488|pir||T401... |
| Match: gi|13359203|dbj|BAB33335.1| |
score: 71.63 |
e-value: 1.5e-11 |
Identity: 34.38% |
Span: 342bp (45.2%) |
Frame: 2 |
| gi|13359203|dbj|BAB33335.1| KIAA1665 protein [Homo sapiens] |
| Match: gi|24475814|ref|NP_612211.1| |
score: 71.63 |
e-value: 1.5e-11 |
Identity: 34.38% |
Span: 342bp (45.2%) |
Frame: 2 |
| gi|24475814|ref|NP_612211.1| RNA polymerase III subunit RPC8 [Homo sapiens] gi|29428071|sp|Q9Y535|RPC8_HUMAN DNA-dire... |
| Match: gi|27229271|ref|NP_084505.2| |
score: 70.86 |
e-value: 2.6e-11 |
Identity: 34.38% |
Span: 342bp (45.2%) |
Frame: 2 |
| gi|27229271|ref|NP_084505.2| RIKEN cDNA 5031409G22 [Mus musculus] gi|27662966|ref|XP_216998.1| similar to RIKEN cDNA ... |
| Match: gi|46122449|ref|XP_385778.1| |
score: 69.32 |
e-value: 7.6e-11 |
Identity: 35.59% |
Span: 342bp (45.2%) |
Frame: 2 |
| gi|46122449|ref|XP_385778.1| hypothetical protein FG05602.1 [Gibberella zeae PH-1] >gi|42550934|gb|EAA73777.1| hypoth... |
| Match: gi|46227635|gb|EAK88570.1| |
score: 67.78 |
e-value: 2.2e-10 |
Identity: 38.79% |
Span: 342bp (45.2%) |
Frame: 2 |
| gi|46227635|gb|EAK88570.1| RPB7 subunit of the RNA polymerase III, OB fold [Cryptosporidium parvum] |
| Match: gi|17566938|ref|NP_505625.1| |
score: 67.78 |
e-value: 2.2e-10 |
Identity: 36.36% |
Span: 342bp (45.2%) |
Frame: 2 |
| gi|17566938|ref|NP_505625.1| RNA polymerase (5K686) [Caenorhabditis elegans] gi|7511361|pir||T28049 hypothetical prot... |
| Match: gi|48096324|ref|XP_394665.1| |
score: 67.01 |
e-value: 3.7e-10 |
Identity: 28.35% |
Span: 342bp (45.2%) |
Frame: 2 |
| gi|48096324|ref|XP_394665.1| similar to Polymerase (RNA) III (DNA directed) polypeptide H [Apis mellifera] |
| Match: gi|45185736|ref|NP_983452.1| |
score: 64.7 |
e-value: 1.9e-09 |
Identity: 34.31% |
Span: 342bp (45.2%) |
Frame: 2 |
| gi|45185736|ref|NP_983452.1| ACR049Wp [Eremothecium gossypii] >gi|44981491|gb|AAS51276.1| ACR049Wp [Eremothecium goss... |
| Match: gi|7525076|ref|NP_051101.1| |
score: 63.54 |
e-value: 4.1e-09 |
Identity: 71.74% |
Span: 138bp (18.3%) |
Frame: 3 |
| gi|7525076|ref|NP_051101.1| ycf2 [Arabidopsis thaliana] gi|7525097|ref|NP_051121.1| ycf2 [Arabidopsis thaliana] gi|66... |
| Match: gi|46437521|gb|EAK96866.1| |
score: 62.77 |
e-value: 7.1e-09 |
Identity: 28.93% |
Span: 342bp (45.2%) |
Frame: 2 |
| gi|46437521|gb|EAK96866.1| hypothetical protein CaO19.443 [Candida albicans SC5314] >gi|46437573|gb|EAK96917.1| hypot... |
| Match: gi|28828433|gb|AAO51051.1| |
score: 60.46 |
e-value: 3.5e-08 |
Identity: 26.71% |
Span: 354bp (46.8%) |
Frame: 2 |
| gi|28828433|gb|AAO51051.1| hypothetical protein [Dictyostelium discoideum] |
| Match: gi|6322705|ref|NP_012778.1| |
score: 60.46 |
e-value: 3.5e-08 |
Identity: 29.5% |
Span: 342bp (45.2%) |
Frame: 2 |
| gi|6322705|ref|NP_012778.1| Subunit of RNA polymerase III; Rpc25p [Saccharomyces cerevisiae] gi|549722|sp|P35718|RPCY... |
| Match: gi|28261781|ref|NP_783294.1| |
score: 60.08 |
e-value: 4.6e-08 |
Identity: 69.57% |
Span: 138bp (18.3%) |
Frame: 3 |
| Ycf2 [Atropa belladonna] >gi47117596|sp|Q8S8U1.1|YCF2B_ATRBE RecName: Full=Protein ycf2 B >gi|20068395|emb|CAC88108.1... |
| Match: gi|225242|prf||1211235CA |
score: 60.08 |
e-value: 4.6e-08 |
Identity: 69.57% |
Span: 138bp (18.3%) |
Frame: 3 |
| ORF 1708 |
| Match: gi|28261760|ref|NP_783274.1| |
score: 60.08 |
e-value: 4.6e-08 |
Identity: 69.57% |
Span: 138bp (18.3%) |
Frame: 3 |
| Ycf2 [Atropa belladonna] >gi47117597|sp|Q8S8V2.1|YCF2A_ATRBE RecName: Full=Protein ycf2 A >gi|20068374|emb|CAC88087.1... |
| Match: gi|11466000|ref|NP_054542.1| |
score: 60.08 |
e-value: 4.6e-08 |
Identity: 69.57% |
Span: 138bp (18.3%) |
Frame: 3 |
| Ycf2 [Nicotiana tabacum] >gi11466033|ref|NP_054575.1| Ycf2 [Nicotiana tabacum] >gi|78102582|ref|YP_358722.1| Ycf2 [Ni... |
| Match: gi|82207|pir||A05205 |
score: 60.08 |
e-value: 4.6e-08 |
Identity: 69.57% |
Span: 138bp (18.3%) |
Frame: 3 |
| gi|82207|pir||A05205 hypothetical protein 1708 - common tobacco chloroplast |
| Match: gi|24662815|ref|NP_648490.1| |
score: 59.69 |
e-value: 6e-08 |
Identity: 28.78% |
Span: 342bp (45.2%) |
Frame: 2 |
| gi|24662815|ref|NP_648490.1| CG7339-PA [Drosophila melanogaster] gi|7294695|gb|AAF50032.1| CG7339-PA [Drosophila mela... |
| Match: gi|11497598|ref|NP_055004.1| |
score: 59.31 |
e-value: 7.8e-08 |
Identity: 69.57% |
Span: 138bp (18.3%) |
Frame: 3 |
| gi|11497598|ref|NP_055004.1| ycf2 protein [Spinacia oleracea] gi|19855392|sp|P08973|YCF2_SPIOL Hypothetical 250 kDa p... |
| Match: gi|81505|pir||S01446 |
score: 59.31 |
e-value: 7.8e-08 |
Identity: 69.57% |
Span: 138bp (18.3%) |
Frame: 3 |
| gi|81505|pir||S01446 hypothetical protein 2131 - spinach chloroplast gi|12246|emb|CAA30743.1| unnamed protein product... |
| Match: gi|49072458|ref|XP_400518.1| |
score: 59.31 |
e-value: 7.8e-08 |
Identity: 30% |
Span: 342bp (45.2%) |
Frame: 2 |
| gi|49072458|ref|XP_400518.1| hypothetical protein UM02903.1 [Ustilago maydis 521] >gi|46098719|gb|EAK83952.1| hypothe... |
| Match: gi|9838487|ref|NP_064099.1| |
score: 57.77 |
e-value: 2.3e-07 |
Identity: 85.29% |
Span: 102bp (13.5%) |
Frame: 3 |
| gi|9838487|ref|NP_064099.1| orf393 [Beta vulgaris] gi|9087349|dbj|BAA99493.1| orf393 [Beta vulgaris subsp. vulgaris] |
| Match: gi|16878080|gb|AAH17248.1| |
score: 56.61 |
e-value: 5.1e-07 |
Identity: 33.63% |
Span: 297bp (39.3%) |
Frame: 2 |
| gi|16878080|gb|AAH17248.1| RPC8 protein [Homo sapiens] |
| Match: gi|32480886|ref|NP_862797.1| |
score: 56.22 |
e-value: 6.6e-07 |
Identity: 47.56% |
Span: 246bp (32.5%) |
Frame: 3 |
| Ycf2 [Calycanthus floridus var. glaucus] >gi32480909|ref|NP_862818.1| Ycf2 [Calycanthus floridus var. glaucus] >gi|47... |
| Match: gi|23508254|ref|NP_700923.1| |
score: 55.45 |
e-value: 1.1e-06 |
Identity: 32.77% |
Span: 342bp (45.2%) |
Frame: 2 |
| gi|23508254|ref|NP_700923.1| hypothetical protein, conserved [Plasmodium falciparum 3D7] gi|23495984|gb|AAN35647.1| h... |
| Match: gi|34500957|ref|NP_904142.1| |
score: 54.68 |
e-value: 1.9e-06 |
Identity: 63.04% |
Span: 138bp (18.3%) |
Frame: 3 |
| gi|34500957|ref|NP_904142.1| Ycf2 protein [Amborella trichopoda] gi|34500977|ref|NP_904161.1| Ycf2 protein [Amborella... |
| Match: gi|1491724|emb|CAA67853.1| |
score: 54.3 |
e-value: 2.5e-06 |
Identity: 63.04% |
Span: 138bp (18.3%) |
Frame: 3 |
| gi|1491724|emb|CAA67853.1| orf [Musa acuminata] |
| Match: gi|28261728|ref|NP_783243.1| |
score: 53.91 |
e-value: 3.3e-06 |
Identity: 81.25% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|28261728|ref|NP_783243.1| photosystem I assembly protein Yc4 [Atropa belladonna] gi|20068342|emb|CAC88055.1| yc4 p... |
| Match: gi|18202918|sp|Q9GDV1|YCF4_CARCL |
score: 53.91 |
e-value: 3.3e-06 |
Identity: 81.25% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|18202918|sp|Q9GDV1|YCF4_CARCL Photosystem I assembly protein ycf4 gi|11177507|gb|AAG32309.1| ycf4 [Carpobrotus chi... |
| Match: gi|11465968|ref|NP_054510.1| |
score: 53.91 |
e-value: 3.3e-06 |
Identity: 81.25% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|11465968|ref|NP_054510.1| photosystem I assembly protein Ycf4 [Nicotiana tabacum] gi|140292|sp|P12207|YCF4_TOBAC P... |
| Match: gi|13518480|ref|NP_084839.1| |
score: 53.91 |
e-value: 3.3e-06 |
Identity: 84.38% |
Span: 96bp (12.7%) |
Frame: 3 |
| gi|13518480|ref|NP_084839.1| ycf2 [Lotus corniculatus var. japonicus] gi|13518498|ref|NP_084856.1| Ycf2 [Lotus cornic... |
| Match: gi|11466972|ref|NP_054393.1| |
score: 53.91 |
e-value: 3.3e-06 |
Identity: 60.42% |
Span: 138bp (18.3%) |
Frame: 3 |
| gi|11466972|ref|NP_054393.1| Ycf2 [Epifagus virginiana] gi|11466978|ref|NP_054397.1| Ycf2 [Epifagus virginiana] gi|23... |
| Match: gi|47206295|emb|CAF93183.1| |
score: 53.14 |
e-value: 5.6e-06 |
Identity: 35.44% |
Span: 225bp (29.8%) |
Frame: 2 |
| gi|47206295|emb|CAF93183.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|11497539|ref|NP_054947.1| |
score: 51.22 |
e-value: 2.1e-05 |
Identity: 75% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|11497539|ref|NP_054947.1| photosystem I assembly protein Ycf4 [Spinacia oleracea] gi|18203262|sp|Q9M3L5|YCF4_SPIOL... |
| Match: gi|33327172|gb|AAQ08962.1| |
score: 51.22 |
e-value: 2.1e-05 |
Identity: 75% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|33327172|gb|AAQ08962.1| hypothetical protein 184 [Fagus sylvatica] >gi|33327176|gb|AAQ08965.1| hypothetical protei... |
| Match: gi|13518343|ref|NP_084702.1| |
score: 50.45 |
e-value: 3.6e-05 |
Identity: 75% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|13518343|ref|NP_084702.1| photosystem I assembly protein Ycf4 [Oenothera elata subsp. hookeri] gi|18203291|sp|Q9MT... |
| Match: gi|49087254|ref|XP_405584.1| |
score: 50.45 |
e-value: 3.6e-05 |
Identity: 32.29% |
Span: 288bp (38.1%) |
Frame: 2 |
| gi|49087254|ref|XP_405584.1| hypothetical protein AN1447.2 [Aspergillus nidulans FGSC A4] >gi|40745421|gb|EAA64577.1|... |
| Match: gi|32480854|ref|NP_862765.1| |
score: 48.52 |
e-value: 0.00014 |
Identity: 71.88% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|32480854|ref|NP_862765.1| photosystem I assembly protein Ycf4 [Calycanthus floridus var. glaucus] gi|32399390|emb|... |
| Match: gi|31239987|ref|XP_320407.1| |
score: 48.14 |
e-value: 0.00018 |
Identity: 27.78% |
Span: 300bp (39.7%) |
Frame: 2 |
| gi|31239987|ref|XP_320407.1| ENSANGP00000009179 [Anopheles gambiae] gi|21287889|gb|EAA00210.1| ENSANGP00000009179 [An... |
| Match: gi|34500925|ref|NP_904110.1| |
score: 47.37 |
e-value: 0.00031 |
Identity: 65.62% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|34500925|ref|NP_904110.1| Ycf4 protein [Amborella trichopoda] gi|34481640|emb|CAD45118.1| Ycf4 protein [Amborella ... |
| Match: gi|19173391|ref|NP_597194.1| |
score: 46.98 |
e-value: 0.0004 |
Identity: 26.09% |
Span: 342bp (45.2%) |
Frame: 2 |
| gi|19173391|ref|NP_597194.1| DNA-DIRECTED RNA POLYMERASE III 25KDA POLYPEPTIDE [Encephalitozoon cuniculi] gi|19170980... |
| Match: gi|2493696|sp|Q31910|YCF4_BRAOL |
score: 46.59 |
e-value: 0.00052 |
Identity: 71.88% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|2493696|sp|Q31910|YCF4_BRAOL Photosystem I assembly protein ycf4 gi|7448362|pir||T14523 hypothetical protein - wil... |
| Match: gi|100819|pir||S17325 |
score: 46.21 |
e-value: 0.00068 |
Identity: 68.75% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|100819|pir||S17325 hypothetical protein 185 - wheat chloroplast gi|12346|emb|CAA44030.1| ORF 185 [Triticum aestivum] |
| Match: gi|48147248|dbj|BAD22554.1| |
score: 46.21 |
e-value: 0.00068 |
Identity: 68.75% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|48147248|dbj|BAD22554.1| hypothetical protein [Amblyopyrum muticum] |
| Match: gi|14017582|ref|NP_114269.1| |
score: 46.21 |
e-value: 0.00068 |
Identity: 68.75% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|14017582|ref|NP_114269.1| photosystem I assembly protein Ycf4 [Triticum aestivum] gi|17380340|sp|P30982|YCF4_WHEAT... |
| Match: gi|140289|sp|P20454|YCF4_HORVU |
score: 46.21 |
e-value: 0.00068 |
Identity: 68.75% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|140289|sp|P20454|YCF4_HORVU Photosystem I assembly protein ycf4 gi|100631|pir||B34302 hypothetical protein (psaI 3... |
| Match: gi|42795563|gb|AAS46129.1| |
score: 45.82 |
e-value: 0.00089 |
Identity: 65.62% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|42795563|gb|AAS46129.1| photosystem I assembly protein Ycf4 [Oryza sativa (japonica cultivar-group)] >gi|42795627|... |
| Match: gi|46805108|dbj|BAD17347.1| |
score: 45.82 |
e-value: 0.00089 |
Identity: 65.62% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|46805108|dbj|BAD17347.1| rice chloroplast ORF185 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|11466800|ref|NP_039396.1| |
score: 45.82 |
e-value: 0.00089 |
Identity: 65.62% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|11466800|ref|NP_039396.1| photosystem I assembly protein Ycf4 [Oryza sativa (japonica cultivar-group)] gi|34908818... |
| Match: gi|11467202|ref|NP_043035.1| |
score: 45.44 |
e-value: 0.001 |
Identity: 65.62% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|11467202|ref|NP_043035.1| photosystem I assembly protein Ycf4 [Zea mays] gi|1175645|sp|P46642|YCF4_MAIZE Photosyst... |
| Match: gi|7525044|ref|NP_051070.1| |
score: 44.67 |
e-value: 0.002 |
Identity: 68.75% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|7525044|ref|NP_051070.1| photosystem I assembly protein ycf4 [Arabidopsis thaliana] gi|6686167|sp|P56788|YCF4_ARAT... |
| Match: gi|34913826|ref|NP_918260.1| |
score: 44.67 |
e-value: 0.002 |
Identity: 62.5% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|34913826|ref|NP_918260.1| chloroplast ORF185 [Oryza sativa (japonica cultivar-group)] gi|20161896|dbj|BAB90808.1| ... |
| Match: gi|7524651|ref|NP_042405.1| |
score: 43.51 |
e-value: 0.004 |
Identity: 62.5% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|7524651|ref|NP_042405.1| photosystem I assembly protein Ycf4 [Pinus thunbergii] gi|1175646|sp|P41620|YCF4_PINTH Ph... |
| Match: gi|140287|sp|P25412|YCF4_AEGTA |
score: 43.13 |
e-value: 0.006 |
Identity: 65.62% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|140287|sp|P25412|YCF4_AEGTA Photosystem I assembly protein ycf4 gi|100540|pir||S17321 hypothetical protein 185 - A... |
| Match: gi|47189269|emb|CAF87239.1| |
score: 41.97 |
e-value: 0.013 |
Identity: 39.02% |
Span: 123bp (16.3%) |
Frame: 2 |
| gi|47189269|emb|CAF87239.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|13518449|ref|NP_084809.1| |
score: 41.97 |
e-value: 0.013 |
Identity: 62.5% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|13518449|ref|NP_084809.1| photosystem I assembly protein ycf4 [Lotus corniculatus var. japonicus] gi|18202723|sp|Q... |
| Match: gi|11466713|ref|NP_039309.1| |
score: 41.59 |
e-value: 0.017 |
Identity: 59.38% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|11466713|ref|NP_039309.1| photosystem I assembly protein ycf4 [Marchantia polymorpha] gi|140290|sp|P12205|YCF4_MAR... |
| Match: gi|40539100|gb|AAR87356.1| |
score: 40.05 |
e-value: 0.049 |
Identity: 43.18% |
Span: 132bp (17.5%) |
Frame: 2 |
| gi|40539100|gb|AAR87356.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] >gi|40786617|gb|AAR89892.1| ... |
| Match: gi|28202183|ref|NP_777424.1| |
score: 39.28 |
e-value: 0.084 |
Identity: 53.12% |
Span: 96bp (12.7%) |
Frame: 1 |
| gi|28202183|ref|NP_777424.1| photosystem I assembly protein Ycf4 [Anthoceros formosae] gi|27807885|dbj|BAC55360.1| Yc... |
| Match: gi|23489936|gb|EAA21827.1| |
score: 39.28 |
e-value: 0.084 |
Identity: 28.89% |
Span: 270bp (35.7%) |
Frame: 2 |
| gi|23489936|gb|EAA21827.1| RNA polymerase Rpb7, N-terminal domain, putative [Plasmodium yoelii yoelii] |
|
