| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|225446337|ref|XP_002272136.1| |
score: 184 |
e-value: 6e-45 |
Identity: 49.75% |
Span: 504bp (65.9%) |
Frame: 3 |
| PREDICTED: similar to ring domain containing protein isoform 2 [Vitis vinifera] >gi225446339|ref|XP_002272107.1| PRED... |
| Match: gi|41059804|gb|AAR99376.1| |
score: 184 |
e-value: 6e-45 |
Identity: 49.3% |
Span: 543bp (71.0%) |
Frame: 3 |
| ring domain containing protein [Capsicum annuum] |
| Match: gi|224127182|ref|XP_002329420.1| |
score: 167 |
e-value: 8e-40 |
Identity: 47.03% |
Span: 498bp (65.1%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222870470|gb|EEF07601.1| predicted protein [Populus trichocarpa] |
| Match: gi|225468785|ref|XP_002262822.1| |
score: 167 |
e-value: 8e-40 |
Identity: 46.57% |
Span: 513bp (67.1%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147810574|emb|CAN63097.1| hypothetical protein [Vitis vinifera] |
| Match: gi|224121892|ref|XP_002330679.1| |
score: 165 |
e-value: 5e-39 |
Identity: 47.29% |
Span: 498bp (65.1%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222872283|gb|EEF09414.1| predicted protein [Populus trichocarpa] |
| Match: gi|255556043|ref|XP_002519056.1| |
score: 160 |
e-value: 2e-37 |
Identity: 45.71% |
Span: 525bp (68.6%) |
Frame: 3 |
| rnf5, putative [Ricinus communis] >gi223541719|gb|EEF43267.1| rnf5, putative [Ricinus communis] |
| Match: gi|255635730|gb|ACU18214.1| |
score: 153 |
e-value: 2e-35 |
Identity: 40.09% |
Span: 579bp (75.7%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|255553769|ref|XP_002517925.1| |
score: 149 |
e-value: 4e-34 |
Identity: 48.07% |
Span: 441bp (57.6%) |
Frame: 3 |
| rnf5, putative [Ricinus communis] >gi223542907|gb|EEF44443.1| rnf5, putative [Ricinus communis] |
| Match: gi|255638201|gb|ACU19414.1| |
score: 148 |
e-value: 5e-34 |
Identity: 45.23% |
Span: 528bp (69.0%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|224128161|ref|XP_002329096.1| |
score: 145 |
e-value: 3e-33 |
Identity: 43.14% |
Span: 501bp (65.5%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222869765|gb|EEF06896.1| predicted protein [Populus trichocarpa] |
| Match: gi|22795037|gb|AAN05420.1| |
score: 145 |
e-value: 4e-33 |
Identity: 42.42% |
Span: 501bp (65.5%) |
Frame: 3 |
| putative RING protein [Populus tremula x Populus alba] |
| Match: gi|224125502|ref|XP_002329821.1| |
score: 144 |
e-value: 7e-33 |
Identity: 43.22% |
Span: 501bp (65.5%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi118484396|gb|ABK94075.1| unknown [Populus trichocarpa] >gi|222870883|gb|EE... |
| Match: gi|255639433|gb|ACU20011.1| |
score: 144 |
e-value: 1e-32 |
Identity: 39.9% |
Span: 528bp (69.0%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|255637671|gb|ACU19159.1| |
score: 144 |
e-value: 1e-32 |
Identity: 45.74% |
Span: 486bp (63.5%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|225461411|ref|XP_002282248.1| |
score: 143 |
e-value: 2e-32 |
Identity: 39.3% |
Span: 597bp (78.0%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|224077116|ref|XP_002305139.1| |
score: 140 |
e-value: 1e-31 |
Identity: 41.03% |
Span: 486bp (63.5%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222848103|gb|EEE85650.1| predicted protein [Populus trichocarpa] |
| Match: gi|270230993|emb|CBI20320.1| |
score: 137 |
e-value: 9e-31 |
Identity: 40.8% |
Span: 597bp (78.0%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|255573345|ref|XP_002527599.1| |
score: 137 |
e-value: 9e-31 |
Identity: 42.65% |
Span: 489bp (63.9%) |
Frame: 3 |
| rnf5, putative [Ricinus communis] >gi223533016|gb|EEF34780.1| rnf5, putative [Ricinus communis] |
| Match: gi|224114956|ref|XP_002316902.1| |
score: 128 |
e-value: 6e-28 |
Identity: 37.81% |
Span: 501bp (65.5%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222859967|gb|EEE97514.1| predicted protein [Populus trichocarpa] |
| Match: gi|270238638|emb|CBI25895.1| |
score: 125 |
e-value: 4e-27 |
Identity: 51.69% |
Span: 321bp (42.0%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|15236326|ref|NP_192260.1| |
score: 124 |
e-value: 1e-26 |
Identity: 37.82% |
Span: 501bp (65.5%) |
Frame: 3 |
| RMA1; protein binding / ubiquitin-protein ligase/ zinc ion binding [Arabidopsis thaliana] >gi42572819|ref|NP_974506.1... |
| Match: gi|223943719|gb|ACN25943.1| |
score: 114 |
e-value: 1e-23 |
Identity: 50.88% |
Span: 306bp (40.0%) |
Frame: 3 |
| unknown [Zea mays] |
| Match: gi|226497016|ref|NP_001152715.1| |
score: 114 |
e-value: 1e-23 |
Identity: 50.88% |
Span: 306bp (40.0%) |
Frame: 3 |
| ring domain containing protein [Zea mays] >gi195659279|gb|ACG49107.1| ring domain containing protein [Zea mays] |
| Match: gi|242076572|ref|XP_002448222.1| |
score: 113 |
e-value: 2e-23 |
Identity: 51.43% |
Span: 309bp (40.4%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_06g023430 [Sorghum bicolor] >gi241939405|gb|EES12550.1| hypothetical protein SORBIDRA... |
| Match: gi|217071982|gb|ACJ84351.1| |
score: 113 |
e-value: 2e-23 |
Identity: 36.98% |
Span: 501bp (65.5%) |
Frame: 3 |
| unknown [Medicago truncatula] |
|
| 216 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 12 hits recorded |
| Match: At4G03510.2 |
score: 124 |
e-value: 6e-29 |
Identity: 37.82% |
Span: 501bp (65.5%) |
Frame: 3 |
| Symbols: RMA1 | RMA1 (Ring finger protein with Membrane Anchor 1); protein binding / ubiquitin-protein ligase/ zinc ... |
| Match: At4G03510.1 |
score: 124 |
e-value: 6e-29 |
Identity: 37.82% |
Span: 501bp (65.5%) |
Frame: 3 |
| Symbols: RMA1 | RMA1 (Ring finger protein with Membrane Anchor 1); protein binding / ubiquitin-protein ligase/ zinc ... |
| Match: At1G19310.1 |
score: 110 |
e-value: 9e-25 |
Identity: 48.11% |
Span: 309bp (40.4%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr1:6676415-6677095 REVERSE |
| Match: At4G28270.1 |
score: 108 |
e-value: 5e-24 |
Identity: 37.14% |
Span: 492bp (64.3%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr4:14007620-14008201 REVERSE |
| Match: At1G74990.1 |
score: 105 |
e-value: 3e-23 |
Identity: 44.14% |
Span: 318bp (41.6%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr1:28163498-28163911 REVERSE |
| Match: At4G27470.1 |
score: 105 |
e-value: 4e-23 |
Identity: 51.65% |
Span: 264bp (34.5%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr4:13735582-13736313 FORWARD |
| Match: At2G23780.1 |
score: 103 |
e-value: 1e-22 |
Identity: 48.51% |
Span: 303bp (39.6%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr2:10130631-10131314 REVERSE |
| Match: At3G58030.3 |
score: 92 |
e-value: 3e-19 |
Identity: 38% |
Span: 300bp (39.2%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr3:21496504-21497814 FORWARD |
| Match: At3G58030.2 |
score: 92 |
e-value: 3e-19 |
Identity: 38% |
Span: 300bp (39.2%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr3:21496504-21497814 FORWARD |
| Match: At3G58030.1 |
score: 92 |
e-value: 3e-19 |
Identity: 38% |
Span: 300bp (39.2%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr3:21496504-21497814 FORWARD |
| Match: At2G42030.1 |
score: 88.2 |
e-value: 5e-18 |
Identity: 44.32% |
Span: 264bp (34.5%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr2:17546147-17547424 REVERSE |
| Match: At2G44410.1 |
score: 75.5 |
e-value: 3e-14 |
Identity: 35.56% |
Span: 264bp (34.5%) |
Frame: 3 |
| protein binding / zinc ion binding | chr2:18335949-18337190 FORWARD |
|
| swissprot [blastx] | Showing best 10 hits recorded |
| Match: Q6PC78 |
score: 87.4 |
e-value: 9e-17 |
Identity: 48.05% |
Span: 231bp (30.2%) |
Frame: 3 |
| RING finger protein 185 OS=Danio rerio GN=rnf185 PE=2 SV=1 |
| Match: Q5M807 |
score: 86.3 |
e-value: 2e-16 |
Identity: 51.32% |
Span: 228bp (29.8%) |
Frame: 3 |
| E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus GN=Rnf5 PE=2 SV=1 |
| Match: O35445 |
score: 86.3 |
e-value: 2e-16 |
Identity: 51.32% |
Span: 228bp (29.8%) |
Frame: 3 |
| E3 ubiquitin-protein ligase RNF5 OS=Mus musculus GN=Rnf5 PE=1 SV=1 |
| Match: Q99942 |
score: 85.1 |
e-value: 5e-16 |
Identity: 51.32% |
Span: 228bp (29.8%) |
Frame: 3 |
| E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens GN=RNF5 PE=1 SV=1 |
| Match: Q568Y3 |
score: 84.3 |
e-value: 8e-16 |
Identity: 50.67% |
Span: 225bp (29.4%) |
Frame: 3 |
| RING finger protein 185 OS=Rattus norvegicus GN=Rnf185 PE=2 SV=1 |
| Match: Q5RFK9 |
score: 84.3 |
e-value: 8e-16 |
Identity: 50.67% |
Span: 225bp (29.4%) |
Frame: 3 |
| RING finger protein 185 OS=Pongo abelii GN=RNF185 PE=2 SV=1 |
| Match: Q91YT2 |
score: 84.3 |
e-value: 8e-16 |
Identity: 50.67% |
Span: 225bp (29.4%) |
Frame: 3 |
| RING finger protein 185 OS=Mus musculus GN=Rnf185 PE=2 SV=1 |
| Match: Q96GF1 |
score: 84.3 |
e-value: 8e-16 |
Identity: 50.67% |
Span: 225bp (29.4%) |
Frame: 3 |
| RING finger protein 185 OS=Homo sapiens GN=RNF185 PE=2 SV=1 |
| Match: Q5ZIR9 |
score: 83.6 |
e-value: 1e-15 |
Identity: 51.52% |
Span: 198bp (25.9%) |
Frame: 3 |
| RING finger protein 185 OS=Gallus gallus GN=RNF185 PE=2 SV=1 |
| Match: Q09463 |
score: 79.3 |
e-value: 2e-14 |
Identity: 40.21% |
Span: 291bp (38.0%) |
Frame: 3 |
| RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5 PE=1 SV=1 |
|
