| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|15237311|ref|NP_197130.1| |
score: 301.2 |
e-value: 1.2e-80 |
Identity: 71.14% |
Span: 603bp (77.9%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi9755836|emb|CAC01867.1| putative protein [Ar... |
| Match: gi|38345380|emb|CAE03112.2| |
score: 294.7 |
e-value: 1.2e-78 |
Identity: 69% |
Span: 600bp (77.5%) |
Frame: 1 |
| gi|38345380|emb|CAE03112.2| OSJNBa0067K08.9 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|10798632|emb|CAC12816.1| |
score: 175.6 |
e-value: 7.8e-43 |
Identity: 95.35% |
Span: 258bp (33.3%) |
Frame: 1 |
| hypothetical protein [Nicotiana tabacum] |
| Match: gi|1667611|gb|AAB18823.1| |
score: 127.9 |
e-value: 1.9e-28 |
Identity: 37.33% |
Span: 636bp (82.2%) |
Frame: 1 |
| gi|1667611|gb|AAB18823.1| Tat-SF1 [Homo sapiens] |
| Match: gi|23956212|ref|NP_082518.1| |
score: 125.2 |
e-value: 1.2e-27 |
Identity: 36.76% |
Span: 597bp (77.1%) |
Frame: 1 |
| gi|23956212|ref|NP_082518.1| RIKEN cDNA 2600017A12 [Mus musculus] gi|22902415|gb|AAH37711.1| RIKEN cDNA 2600017A12 [M... |
| Match: gi|12847222|dbj|BAB27483.1| |
score: 125.2 |
e-value: 1.2e-27 |
Identity: 36.76% |
Span: 597bp (77.1%) |
Frame: 1 |
| gi|12847222|dbj|BAB27483.1| unnamed protein product [Mus musculus] |
| Match: gi|30584025|gb|AAP36261.1| |
score: 125.2 |
e-value: 1.2e-27 |
Identity: 37.62% |
Span: 591bp (76.4%) |
Frame: 1 |
| gi|30584025|gb|AAP36261.1| Homo sapiens HIV TAT specific factor 1 [synthetic construct] |
| Match: gi|21361437|ref|NP_055315.2| |
score: 125.2 |
e-value: 1.2e-27 |
Identity: 37.62% |
Span: 591bp (76.4%) |
Frame: 1 |
| gi|21361437|ref|NP_055315.2| HIV TAT specific factor 1; cofactor required for Tat activation of HIV-1 transcription [... |
| Match: gi|49086580|ref|XP_405325.1| |
score: 124.4 |
e-value: 2.1e-27 |
Identity: 34.36% |
Span: 597bp (77.1%) |
Frame: 1 |
| gi|49086580|ref|XP_405325.1| hypothetical protein AN1188.2 [Aspergillus nidulans FGSC A4] >gi|40747150|gb|EAA66306.1|... |
| Match: gi|47221801|emb|CAG08855.1| |
score: 123.6 |
e-value: 3.5e-27 |
Identity: 37.56% |
Span: 579bp (74.8%) |
Frame: 1 |
| gi|47221801|emb|CAG08855.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|37590291|gb|AAH59346.1| |
score: 122.1 |
e-value: 1e-26 |
Identity: 35.86% |
Span: 579bp (74.8%) |
Frame: 1 |
| gi|37590291|gb|AAH59346.1| Unknown (protein for IMAGE:5048879) [Xenopus laevis] |
| Match: gi|34881700|ref|XP_229199.2| |
score: 114 |
e-value: 2.8e-24 |
Identity: 33.94% |
Span: 597bp (77.1%) |
Frame: 1 |
| gi|34881700|ref|XP_229199.2| similar to RIKEN cDNA 2600017A12 [Rattus norvegicus] |
| Match: gi|41055136|ref|NP_957497.1| |
score: 112.8 |
e-value: 6.2e-24 |
Identity: 35.03% |
Span: 579bp (74.8%) |
Frame: 1 |
| gi|41055136|ref|NP_957497.1| similar to HIV TAT specific factor 1 [Danio rerio] >gi|33417205|gb|AAH55565.1| Similar t... |
| Match: gi|21357269|ref|NP_649313.1| |
score: 111.7 |
e-value: 1.4e-23 |
Identity: 36.32% |
Span: 603bp (77.9%) |
Frame: 1 |
| gi|21357269|ref|NP_649313.1| CG6049-PA [Drosophila melanogaster] gi|24668053|ref|NP_730628.1| CG6049-PB [Drosophila m... |
| Match: gi|19113618|ref|NP_596826.1| |
score: 106.7 |
e-value: 4.5e-22 |
Identity: 34.27% |
Span: 594bp (76.7%) |
Frame: 1 |
| gi|19113618|ref|NP_596826.1| putative splicing factor. [Schizosaccharomyces pombe] gi|26401115|sp|O43120|UAP2_SCHPO S... |
| Match: gi|31216942|ref|XP_316330.1| |
score: 100.9 |
e-value: 2.5e-20 |
Identity: 33.66% |
Span: 573bp (74.0%) |
Frame: 1 |
| gi|31216942|ref|XP_316330.1| ENSANGP00000005992 [Anopheles gambiae] gi|21298608|gb|EAA10753.1| ENSANGP00000005992 [An... |
| Match: gi|46108256|ref|XP_381186.1| |
score: 99.75 |
e-value: 5.5e-20 |
Identity: 30.7% |
Span: 558bp (72.1%) |
Frame: 1 |
| gi|46108256|ref|XP_381186.1| hypothetical protein FG01010.1 [Gibberella zeae PH-1] >gi|42544970|gb|EAA67813.1| hypoth... |
| Match: gi|17510375|ref|NP_490765.1| |
score: 92.82 |
e-value: 6.7e-18 |
Identity: 30.14% |
Span: 606bp (78.3%) |
Frame: 1 |
| gi|17510375|ref|NP_490765.1| HIV Tat specific factor 1 (51.8 kD) (1B131) [Caenorhabditis elegans] gi|13559752|gb|AAK2... |
| Match: gi|46228866|gb|EAK89736.1| |
score: 92.82 |
e-value: 6.7e-18 |
Identity: 33.86% |
Span: 534bp (69.0%) |
Frame: 1 |
| gi|46228866|gb|EAK89736.1| similar to putative splicing factor, rrm domain [Cryptosporidium parvum] |
| Match: gi|49067853|ref|XP_398216.1| |
score: 82.03 |
e-value: 1.2e-14 |
Identity: 32.14% |
Span: 510bp (65.9%) |
Frame: 1 |
| gi|49067853|ref|XP_398216.1| hypothetical protein UM00601.1 [Ustilago maydis 521] >gi|46096017|gb|EAK81250.1| hypothe... |
| Match: gi|38104062|gb|EAA50683.1| |
score: 77.8 |
e-value: 2.2e-13 |
Identity: 27.16% |
Span: 558bp (72.1%) |
Frame: 1 |
| gi|38104062|gb|EAA50683.1| hypothetical protein MG04442.4 [Magnaporthe grisea 70-15] |
| Match: gi|32422777|ref|XP_331832.1| |
score: 73.94 |
e-value: 3.2e-12 |
Identity: 36.13% |
Span: 315bp (40.7%) |
Frame: 1 |
| gi|32422777|ref|XP_331832.1| hypothetical protein [Neurospora crassa] gi|28925820|gb|EAA34822.1| hypothetical protein... |
| Match: gi|6324043|ref|NP_014113.1| |
score: 68.55 |
e-value: 1.3e-10 |
Identity: 29.5% |
Span: 564bp (72.9%) |
Frame: 1 |
| gi|6324043|ref|NP_014113.1| cold sensitive U2 snRNA Supressor; Cus2p [Saccharomyces cerevisiae] gi|1730649|sp|P53830|... |
| Match: gi|45269922|gb|AAS56342.1| |
score: 66.24 |
e-value: 6.7e-10 |
Identity: 29% |
Span: 564bp (72.9%) |
Frame: 1 |
| gi|45269922|gb|AAS56342.1| YNL286W [Saccharomyces cerevisiae] |
| Match: gi|46439857|gb|EAK99170.1| |
score: 61.23 |
e-value: 2.2e-08 |
Identity: 27.65% |
Span: 510bp (65.9%) |
Frame: 1 |
| gi|46439857|gb|EAK99170.1| hypothetical protein CaO19.5767 [Candida albicans SC5314] |
| Match: gi|46439782|gb|EAK99096.1| |
score: 58.92 |
e-value: 1.1e-07 |
Identity: 27.06% |
Span: 510bp (65.9%) |
Frame: 1 |
| gi|46439782|gb|EAK99096.1| hypothetical protein CaO19.13190 [Candida albicans SC5314] |
| Match: gi|48097681|ref|XP_391935.1| |
score: 58.15 |
e-value: 1.8e-07 |
Identity: 47.22% |
Span: 198bp (25.6%) |
Frame: 1 |
| gi|48097681|ref|XP_391935.1| similar to CG6049-PA [Apis mellifera] |
| Match: gi|22655131|gb|AAM98156.1| |
score: 56.61 |
e-value: 5.3e-07 |
Identity: 29.21% |
Span: 510bp (65.9%) |
Frame: 1 |
| putative U2 snRNP auxiliary factor [Arabidopsis thaliana] |
| Match: gi|25404298|pir||E96634 |
score: 56.61 |
e-value: 5.3e-07 |
Identity: 29.21% |
Span: 510bp (65.9%) |
Frame: 1 |
| gi|25404298|pir||E96634 probable U2 snRNP auxiliary factor T7P1.5 [imported] - Arabidopsis thaliana gi|12323333|gb|AA... |
| Match: gi|30696485|ref|NP_176287.3| |
score: 56.61 |
e-value: 5.3e-07 |
Identity: 29.21% |
Span: 510bp (65.9%) |
Frame: 1 |
| U2 snRNP auxiliary factor large subunit, putative [Arabidopsis thaliana] >gi209572798|sp|Q8L716.2|U2A2B_ARATH RecName... |
| Match: gi|21553746|gb|AAM62839.1| |
score: 55.45 |
e-value: 1.2e-06 |
Identity: 34.52% |
Span: 252bp (32.6%) |
Frame: 1 |
| putative splicing factor [Arabidopsis thaliana] |
| Match: gi|25411757|pir||B84546 |
score: 55.45 |
e-value: 1.2e-06 |
Identity: 34.52% |
Span: 252bp (32.6%) |
Frame: 1 |
| gi|25411757|pir||B84546 probable splicing factor [imported] - Arabidopsis thaliana |
| Match: gi|18398260|ref|NP_565399.1| |
score: 55.45 |
e-value: 1.2e-06 |
Identity: 34.52% |
Span: 252bp (32.6%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi20197280|gb|AAC64224.2| putative splicing fa... |
| Match: gi|20466772|gb|AAM20703.1| |
score: 55.45 |
e-value: 1.2e-06 |
Identity: 34.52% |
Span: 252bp (32.6%) |
Frame: 1 |
| putative splicing factor [Arabidopsis thaliana] |
| Match: gi|3850823|emb|CAA77136.1| |
score: 55.07 |
e-value: 1.5e-06 |
Identity: 26.55% |
Span: 510bp (65.9%) |
Frame: 1 |
| gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor, large subunit [Nicotiana plumbaginifolia] |
| Match: gi|19115334|ref|NP_594422.1| |
score: 54.68 |
e-value: 2e-06 |
Identity: 42.5% |
Span: 237bp (30.6%) |
Frame: 1 |
| gi|19115334|ref|NP_594422.1| putative splicing factor [Schizosaccharomyces pombe] gi|7492998|pir||T37994 probable spl... |
| Match: gi|39586050|emb|CAE69126.1| |
score: 54.3 |
e-value: 2.6e-06 |
Identity: 30.94% |
Span: 525bp (67.8%) |
Frame: 1 |
| gi|39586050|emb|CAE69126.1| Hypothetical protein CBG15152 [Caenorhabditis briggsae] |
| Match: gi|4033483|sp|P90727|U2AF_CAEBR |
score: 54.3 |
e-value: 2.6e-06 |
Identity: 30.94% |
Span: 525bp (67.8%) |
Frame: 1 |
| gi|4033483|sp|P90727|U2AF_CAEBR Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor 65 kDa subunit) (U2 SNRNP au... |
| Match: gi|34860256|ref|XP_342558.1| |
score: 52.76 |
e-value: 7.7e-06 |
Identity: 39.44% |
Span: 213bp (27.5%) |
Frame: 1 |
| gi|34860256|ref|XP_342558.1| similar to RNA-binding region (RNP1, RRM) containing 2; splicing factor (CC1.3); coactiv... |
| Match: gi|3850821|emb|CAA77135.1| |
score: 52.76 |
e-value: 7.7e-06 |
Identity: 25.82% |
Span: 510bp (65.9%) |
Frame: 1 |
| gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor, large subunit [Nicotiana plumbaginifolia] |
| Match: gi|49066978|ref|XP_397779.1| |
score: 52.76 |
e-value: 7.7e-06 |
Identity: 37.04% |
Span: 240bp (31.0%) |
Frame: 1 |
| gi|49066978|ref|XP_397779.1| hypothetical protein UM00164.1 [Ustilago maydis 521] >gi|46096316|gb|EAK81549.1| hypothe... |
| Match: gi|15234495|ref|NP_195387.1| |
score: 52.76 |
e-value: 7.7e-06 |
Identity: 27.12% |
Span: 510bp (65.9%) |
Frame: 1 |
| ATU2AF65A; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi75318082|sp|O23212.2|U2A... |
| Match: gi|35493811|ref|NP_909122.1| |
score: 52.76 |
e-value: 7.7e-06 |
Identity: 39.44% |
Span: 213bp (27.5%) |
Frame: 1 |
| gi|35493811|ref|NP_909122.1| RNA-binding region containing protein 2 isoform a; splicing factor CC1.3; coactivator of... |
| Match: gi|35493822|ref|NP_909129.1| |
score: 52.76 |
e-value: 7.7e-06 |
Identity: 39.44% |
Span: 213bp (27.5%) |
Frame: 1 |
| gi|35493822|ref|NP_909129.1| RNA-binding region containing protein 2 isoform d; splicing factor CC1.3; coactivator of... |
| Match: gi|18875412|ref|NP_573505.1| |
score: 52.76 |
e-value: 7.7e-06 |
Identity: 39.44% |
Span: 213bp (27.5%) |
Frame: 1 |
| gi|18875412|ref|NP_573505.1| RNA-binding region containing protein 2; coactivator of activating protein-1 and estroge... |
| Match: gi|34365067|emb|CAE45890.1| |
score: 52.76 |
e-value: 7.7e-06 |
Identity: 39.44% |
Span: 213bp (27.5%) |
Frame: 1 |
| gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens] |
| Match: gi|31873732|emb|CAD97833.1| |
score: 52.76 |
e-value: 7.7e-06 |
Identity: 39.44% |
Span: 213bp (27.5%) |
Frame: 1 |
| gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens] |
| Match: gi|35493817|ref|NP_909125.1| |
score: 52.76 |
e-value: 7.7e-06 |
Identity: 39.44% |
Span: 213bp (27.5%) |
Frame: 1 |
| gi|35493817|ref|NP_909125.1| RNA-binding region containing protein 2 isoform c; splicing factor CC1.3; coactivator of... |
| Match: gi|13278367|gb|AAH04000.1| |
score: 52.76 |
e-value: 7.7e-06 |
Identity: 39.44% |
Span: 213bp (27.5%) |
Frame: 1 |
| gi|13278367|gb|AAH04000.1| Rnpc2 protein [Mus musculus] |
| Match: gi|4757926|ref|NP_004893.1| |
score: 52.76 |
e-value: 7.7e-06 |
Identity: 39.44% |
Span: 213bp (27.5%) |
Frame: 1 |
| gi|4757926|ref|NP_004893.1| RNA-binding region containing protein 2 isoform b; splicing factor CC1.3; coactivator of ... |
| Match: gi|48098445|ref|XP_392063.1| |
score: 52.37 |
e-value: 1e-05 |
Identity: 29.63% |
Span: 372bp (48.1%) |
Frame: 1 |
| gi|48098445|ref|XP_392063.1| similar to ENSANGP00000016235 [Apis mellifera] |
| Match: gi|15487635|gb|AAL00879.1| |
score: 52.37 |
e-value: 1e-05 |
Identity: 28.73% |
Span: 525bp (67.8%) |
Frame: 1 |
| gi|15487635|gb|AAL00879.1| U2af splicing factor protein 1, isoform c [Caenorhabditis elegans] |
| Match: gi|17556654|ref|NP_497326.1| |
score: 52.37 |
e-value: 1e-05 |
Identity: 28.73% |
Span: 525bp (67.8%) |
Frame: 1 |
| gi|17556654|ref|NP_497326.1| U2AF splicing factor (55.4 kD) (uaf-1) [Caenorhabditis elegans] gi|6226906|sp|P90978|U2A... |
| Match: gi|31221129|ref|XP_317010.1| |
score: 52.37 |
e-value: 1e-05 |
Identity: 41.77% |
Span: 237bp (30.6%) |
Frame: 1 |
| gi|31221129|ref|XP_317010.1| ENSANGP00000019306 [Anopheles gambiae] gi|30175266|gb|EAA12873.2| ENSANGP00000019306 [An... |
| Match: gi|21245140|gb|AAM44400.1| |
score: 52.37 |
e-value: 1e-05 |
Identity: 28.73% |
Span: 525bp (67.8%) |
Frame: 1 |
| gi|21245140|gb|AAM44400.1| U2af splicing factor protein 1, isoform d [Caenorhabditis elegans] |
| Match: gi|47223170|emb|CAG11305.1| |
score: 51.99 |
e-value: 1.3e-05 |
Identity: 38.03% |
Span: 213bp (27.5%) |
Frame: 1 |
| gi|47223170|emb|CAG11305.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|15030041|gb|AAH11265.1| |
score: 51.22 |
e-value: 2.2e-05 |
Identity: 28.47% |
Span: 405bp (52.3%) |
Frame: 1 |
| gi|15030041|gb|AAH11265.1| SIAHBP1 protein [Homo sapiens] gi|15080471|gb|AAH11979.1| SIAHBP1 protein [Homo sapiens] |
| Match: gi|16307289|gb|AAH09734.1| |
score: 51.22 |
e-value: 2.2e-05 |
Identity: 28.47% |
Span: 405bp (52.3%) |
Frame: 1 |
| gi|16307289|gb|AAH09734.1| SIAHBP1 protein [Homo sapiens] |
| Match: gi|28059803|gb|AAO30095.1| |
score: 51.22 |
e-value: 2.2e-05 |
Identity: 37.5% |
Span: 240bp (31.0%) |
Frame: 1 |
| splicing factor-like protein [Arabidopsis thaliana] |
| Match: gi|31211119|ref|XP_314526.1| |
score: 51.22 |
e-value: 2.2e-05 |
Identity: 34.38% |
Span: 249bp (32.2%) |
Frame: 1 |
| gi|31211119|ref|XP_314526.1| ENSANGP00000016235 [Anopheles gambiae] gi|30176487|gb|EAA09944.2| ENSANGP00000016235 [An... |
| Match: gi|18416114|ref|NP_568220.1| |
score: 51.22 |
e-value: 2.2e-05 |
Identity: 37.5% |
Span: 240bp (31.0%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi15451046|gb|AAK96794.1| splicing factor-like... |
| Match: gi|25072205|ref|NP_739566.1| |
score: 51.22 |
e-value: 2.2e-05 |
Identity: 37.31% |
Span: 192bp (24.8%) |
Frame: 1 |
| gi|25072205|ref|NP_739566.1| U2 auxiliary factor 26; auxiliary factor 26 [Mus musculus] gi|34855699|ref|XP_341829.1| ... |
| Match: gi|6176532|gb|AAF05605.1| |
score: 51.22 |
e-value: 2.2e-05 |
Identity: 28.47% |
Span: 405bp (52.3%) |
Frame: 1 |
| gi|6176532|gb|AAF05605.1| poly-U binding splicing factor PUF60 [Homo sapiens] |
| Match: gi|9758966|dbj|BAB09409.1| |
score: 51.22 |
e-value: 2.2e-05 |
Identity: 37.5% |
Span: 240bp (31.0%) |
Frame: 1 |
| splicing factor-like protein [Arabidopsis thaliana] |
| Match: gi|17298690|ref|NP_055096.2| |
score: 51.22 |
e-value: 2.2e-05 |
Identity: 28.47% |
Span: 405bp (52.3%) |
Frame: 1 |
| gi|17298690|ref|NP_055096.2| fuse-binding protein-interacting repressor isoform b; siah binding protein 1; pyrimidine... |
| Match: gi|9858779|gb|AAG01126.1| |
score: 51.22 |
e-value: 2.2e-05 |
Identity: 25.42% |
Span: 510bp (65.9%) |
Frame: 1 |
| gi|9858779|gb|AAG01126.1| BAC19.11 [Lycopersicon esculentum] |
| Match: gi|33086652|gb|AAP92638.1| |
score: 51.22 |
e-value: 2.2e-05 |
Identity: 37.31% |
Span: 192bp (24.8%) |
Frame: 1 |
| gi|33086652|gb|AAP92638.1| Cb2-806 [Rattus norvegicus] |
| Match: gi|17978512|ref|NP_510965.1| |
score: 51.22 |
e-value: 2.2e-05 |
Identity: 28.47% |
Span: 405bp (52.3%) |
Frame: 1 |
| gi|17978512|ref|NP_510965.1| fuse-binding protein-interacting repressor isoform a; siah binding protein 1; pyrimidine... |
| Match: gi|1809248|gb|AAB41656.1| |
score: 51.22 |
e-value: 2.2e-05 |
Identity: 28.47% |
Span: 405bp (52.3%) |
Frame: 1 |
| gi|1809248|gb|AAB41656.1| siah binding protein 1 [Homo sapiens] |
| Match: gi|17136764|ref|NP_476891.1| |
score: 50.06 |
e-value: 5e-05 |
Identity: 27.37% |
Span: 537bp (69.4%) |
Frame: 1 |
| gi|17136764|ref|NP_476891.1| U2 small nuclear riboprotein auxiliary factor 50 CG9998-PA [Drosophila melanogaster] gi|... |
| Match: gi|37534740|ref|NP_921672.1| |
score: 50.06 |
e-value: 5e-05 |
Identity: 36.25% |
Span: 240bp (31.0%) |
Frame: 1 |
| gi|37534740|ref|NP_921672.1| putative splicing factor-like protein [Oryza sativa (japonica cultivar-group)] gi|314323... |
| Match: gi|2982698|dbj|BAA25269.1| |
score: 50.06 |
e-value: 5e-05 |
Identity: 31.73% |
Span: 303bp (39.1%) |
Frame: 1 |
| gi|2982698|dbj|BAA25269.1| tFZR1 [Oncorhynchus mykiss] |
| Match: gi|47221657|emb|CAF97922.1| |
score: 49.68 |
e-value: 6.5e-05 |
Identity: 27.96% |
Span: 537bp (69.4%) |
Frame: 1 |
| gi|47221657|emb|CAF97922.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|4204470|gb|AAD13394.1| |
score: 49.68 |
e-value: 6.5e-05 |
Identity: 31.94% |
Span: 207bp (26.7%) |
Frame: 1 |
| gi|4204470|gb|AAD13394.1| splicing factor U2AF35 [Takifugu rubripes] |
| Match: gi|31205983|ref|XP_311943.1| |
score: 49.68 |
e-value: 6.5e-05 |
Identity: 38.33% |
Span: 168bp (21.7%) |
Frame: 1 |
| gi|31205983|ref|XP_311943.1| ENSANGP00000011066 [Anopheles gambiae] gi|21295970|gb|EAA08115.1| ENSANGP00000011066 [An... |
| Match: gi|18446992|gb|AAL68087.1| |
score: 49.68 |
e-value: 6.5e-05 |
Identity: 31.11% |
Span: 252bp (32.6%) |
Frame: 1 |
| gi|18446992|gb|AAL68087.1| AT16577p [Drosophila melanogaster] |
| Match: gi|19526862|ref|NP_598452.1| |
score: 49.68 |
e-value: 6.5e-05 |
Identity: 27.78% |
Span: 405bp (52.3%) |
Frame: 1 |
| gi|19526862|ref|NP_598452.1| RIKEN cDNA 2410104I19 [Mus musculus] gi|14714891|gb|AAH10601.1| RIKEN cDNA 2410104I19 [M... |
| Match: gi|24659166|ref|NP_611769.2| |
score: 49.68 |
e-value: 6.5e-05 |
Identity: 31.11% |
Span: 252bp (32.6%) |
Frame: 1 |
| gi|24659166|ref|NP_611769.2| CG3162-PA [Drosophila melanogaster] gi|7291545|gb|AAF46969.1| CG3162-PA [Drosophila mela... |
| Match: gi|34866841|ref|XP_343269.1| |
score: 49.68 |
e-value: 6.5e-05 |
Identity: 27.78% |
Span: 405bp (52.3%) |
Frame: 1 |
| gi|34866841|ref|XP_343269.1| siah binding protein 1; FBP interacting repressor; pyrimidine tract binding splicing fac... |
| Match: gi|47226948|emb|CAG05840.1| |
score: 49.68 |
e-value: 6.5e-05 |
Identity: 31.94% |
Span: 207bp (26.7%) |
Frame: 1 |
| gi|47226948|emb|CAG05840.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|5524727|gb|AAD44358.1| |
score: 49.68 |
e-value: 6.5e-05 |
Identity: 27.78% |
Span: 405bp (52.3%) |
Frame: 1 |
| gi|5524727|gb|AAD44358.1| RNA-binding protein SiahBP [Rattus norvegicus] |
| Match: gi|45387787|ref|NP_991252.1| |
score: 49.29 |
e-value: 8.5e-05 |
Identity: 27.42% |
Span: 537bp (69.4%) |
Frame: 1 |
| gi|45387787|ref|NP_991252.1| hypothetical protein zgc:77804 [Danio rerio] >gi|41389016|gb|AAH65869.1| Hypothetical pr... |
| Match: gi|15218489|ref|NP_172503.1| |
score: 48.91 |
e-value: 0.00011 |
Identity: 32.98% |
Span: 237bp (30.6%) |
Frame: 1 |
| U2 snRNP auxiliary factor-related [Arabidopsis thaliana] >gi229621703|sp|Q9SY74.2|C3H5_ARATH RecName: Full=Zinc finge... |
| Match: gi|6005926|ref|NP_009210.1| |
score: 48.91 |
e-value: 0.00011 |
Identity: 29.21% |
Span: 504bp (65.1%) |
Frame: 1 |
| gi|6005926|ref|NP_009210.1| U2 small nuclear ribonucleoprotein auxiliary factor (65kD); splicing factor U2AF 65 kD su... |
| Match: gi|107723|pir||S20250 |
score: 48.91 |
e-value: 0.00011 |
Identity: 29.21% |
Span: 504bp (65.1%) |
Frame: 1 |
| gi|107723|pir||S20250 splicing factor U2AF large chain - human gi|228543|prf||1805352A splicing factor U2AF:SUBUNIT=l... |
| Match: gi|110998|pir||S22646 |
score: 48.52 |
e-value: 0.00014 |
Identity: 29.21% |
Span: 504bp (65.1%) |
Frame: 1 |
| gi|110998|pir||S22646 splicing factor U2AF homolog - mouse gi|1334149|emb|CAA45875.1| unnamed protein product [Mus mu... |
| Match: gi|7512051|pir||JC6125 |
score: 48.52 |
e-value: 0.00014 |
Identity: 36.67% |
Span: 168bp (21.7%) |
Frame: 1 |
| gi|7512051|pir||JC6125 U2 small nuclear ribonucleoprotein auxiliary factor small chain - fruit fly (Drosophila melano... |
| Match: gi|17137284|ref|NP_477208.1| |
score: 48.52 |
e-value: 0.00014 |
Identity: 36.67% |
Span: 168bp (21.7%) |
Frame: 1 |
| gi|17137284|ref|NP_477208.1| U2 small nuclear riboprotein auxiliary factor 38 CG3582-PA [Drosophila melanogaster] gi|... |
| Match: gi|136628|sp|P26369|U2AF_MOUSE |
score: 48.52 |
e-value: 0.00014 |
Identity: 29.21% |
Span: 504bp (65.1%) |
Frame: 1 |
| gi|136628|sp|P26369|U2AF_MOUSE Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor 65 kDa subunit) (U2 snRNP aux... |
| Match: gi|46229660|gb|EAK90478.1| |
score: 48.52 |
e-value: 0.00014 |
Identity: 32.18% |
Span: 240bp (31.0%) |
Frame: 1 |
| gi|46229660|gb|EAK90478.1| CG11266-like splicing factor with 3 RRM domains [Cryptosporidium parvum] |
| Match: gi|3850819|emb|CAA77134.1| |
score: 48.14 |
e-value: 0.00019 |
Identity: 35% |
Span: 171bp (22.1%) |
Frame: 1 |
| U2 snRNP auxiliary factor, small subunit [Oryza sativa] |
| Match: gi|13278055|gb|AAH03883.1| |
score: 48.14 |
e-value: 0.00019 |
Identity: 26.47% |
Span: 255bp (32.9%) |
Frame: 1 |
| gi|13278055|gb|AAH03883.1| Similar to RIKEN cDNA 2010107D16 gene [Mus musculus] |
| Match: gi|31206085|ref|XP_311994.1| |
score: 48.14 |
e-value: 0.00019 |
Identity: 28.49% |
Span: 537bp (69.4%) |
Frame: 1 |
| gi|31206085|ref|XP_311994.1| ENSANGP00000018558 [Anopheles gambiae] gi|21296083|gb|EAA08228.1| ENSANGP00000018558 [An... |
| Match: gi|13235096|emb|CAC33541.1| |
score: 48.14 |
e-value: 0.00019 |
Identity: 34.57% |
Span: 231bp (29.8%) |
Frame: 1 |
| gi|13235096|emb|CAC33541.1| U2snRNP auxiliary factor small subunit [Gallus gallus] gi|13235098|emb|CAC33542.1| U2snRN... |
| Match: gi|3850818|emb|CAA77133.1| |
score: 48.14 |
e-value: 0.00019 |
Identity: 35% |
Span: 171bp (22.1%) |
Frame: 1 |
| gi|3850818|emb|CAA77133.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa] |
| Match: gi|5803207|ref|NP_006749.1| |
score: 48.14 |
e-value: 0.00019 |
Identity: 34.57% |
Span: 231bp (29.8%) |
Frame: 1 |
| gi|5803207|ref|NP_006749.1| U2 small nuclear RNA auxillary factor 1; U2 snRNP auxiliary factor small subunit; splicin... |
| Match: gi|12805423|gb|AAH02184.1| |
score: 48.14 |
e-value: 0.00019 |
Identity: 34.57% |
Span: 231bp (29.8%) |
Frame: 1 |
| gi|12805423|gb|AAH02184.1| U2af1 protein [Mus musculus] |
| Match: gi|15988329|pdb|1JMT|A |
score: 48.14 |
e-value: 0.00019 |
Identity: 34.57% |
Span: 231bp (29.8%) |
Frame: 1 |
| gi|15988329|pdb|1JMT|A Chain A, X-Ray Structure Of A Core U2af65U2AF35 HETERODIMER |
| Match: gi|17368837|sp|Q9D883|U2AG_MOUSE |
score: 48.14 |
e-value: 0.00019 |
Identity: 34.57% |
Span: 231bp (29.8%) |
Frame: 1 |
| gi|17368837|sp|Q9D883|U2AG_MOUSE Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor 35 kDa subunit) (U2 snRNP a... |
| Match: gi|17530980|ref|NP_077149.1| |
score: 48.14 |
e-value: 0.00019 |
Identity: 34.57% |
Span: 231bp (29.8%) |
Frame: 1 |
| gi|17530980|ref|NP_077149.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1; U2 small nuclear ribonucle... |
|
| arabidopsis/peptide [blastx] | Showing best 12 hits recorded |
| Match: At5g16260.1 |
score: 301.2 |
e-value: 3.5e-82 |
Identity: 71.14% |
Span: 603bp (77.9%) |
Frame: 1 |
| At5g16260.1 68412.m01754 RNA recognition motif (RRM) - containing protein similar to Tat-SF1 - Homo sapiens, GI:16676... |
| Match: At1g60900.1 |
score: 56.61 |
e-value: 1.5e-08 |
Identity: 29.21% |
Span: 510bp (65.9%) |
Frame: 1 |
| At1g60900.1 68408.m06287 splicing factor U2AF 65 kDa subunit, putative similar to U2 snRNP auxiliary factor, large su... |
| Match: At2g16940.1 |
score: 55.45 |
e-value: 3.3e-08 |
Identity: 34.52% |
Span: 252bp (32.6%) |
Frame: 1 |
| At2g16940.1 68409.m01758 RRM-containing protein |
| Match: At4g36690.1 |
score: 52.76 |
e-value: 2.1e-07 |
Identity: 27.12% |
Span: 510bp (65.9%) |
Frame: 1 |
| At4g36690.1 68411.m04733 splicing factor U2AF 65 kDa subunit, putative U2 auxiliary factor 65 kDa subunit, U2 snRNP a... |
| Match: At5g09880.1 |
score: 51.22 |
e-value: 6.3e-07 |
Identity: 37.5% |
Span: 240bp (31.0%) |
Frame: 1 |
| At5g09880.1 68412.m01056 RRM-containing protein |
| Match: At1g10320.1 |
score: 48.91 |
e-value: 3.1e-06 |
Identity: 32.98% |
Span: 237bp (30.6%) |
Frame: 1 |
| At1g10320.1 68408.m01049 splicing factor U2AF small subunit-related protein, putative similar to U2 small nuclear rib... |
| Match: At1g27650.1 |
score: 46.21 |
e-value: 2e-05 |
Identity: 31.08% |
Span: 213bp (27.5%) |
Frame: 1 |
| At1g27650.1 68408.m03065 splicing factor U2AF small subunit, putative Strong similarity to gb|Y18349 U2 snRNP auxilia... |
| Match: At5g42820.2 |
score: 46.21 |
e-value: 2e-05 |
Identity: 37.1% |
Span: 177bp (22.9%) |
Frame: 1 |
| At5g42820.2 68418.m05216 U2 snRNP auxiliary factor small subunit, putative strong similarity to U2 snRNP auxiliary fa... |
| Match: At5g42820.1 |
score: 46.21 |
e-value: 2e-05 |
Identity: 37.1% |
Span: 177bp (22.9%) |
Frame: 1 |
| At5g42820.1 68412.m04707 splicing factor U2AF small subunit, putative U2 snRNP auxiliary factor, small subunit |
| Match: At3g55460.1 |
score: 38.89 |
e-value: 0.003 |
Identity: 37.93% |
Span: 162bp (20.9%) |
Frame: 1 |
| At3g55460.1 68410.m05688 arginine/serine-rich protein SCL30 Serine/arginine-rich protein/putative splicing factor, Ar... |
| Match: At4g36690.2 |
score: 38.12 |
e-value: 0.005 |
Identity: 27.2% |
Span: 375bp (48.4%) |
Frame: 1 |
| At4g36690.2 68411.m04734 splicing factor U2AF 65 kDa subunit, putative U2 auxiliary factor 65 kDa subunit, U2 snRNP a... |
| Match: At1g30480.1 |
score: 37.74 |
e-value: 0.007 |
Identity: 27.59% |
Span: 240bp (31.0%) |
Frame: 1 |
| At1g30480.1 68408.m03373 DNA damage repair protein -related similar to DNA damage repair protein GB:P42698 from [Arab... |
|
