| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|255572747|ref|XP_002527306.1| |
score: 222 |
e-value: 1e-65 |
Identity: 81.54% |
Span: 390bp (49.0%) |
Frame: 1 |
| ccr4-associated factor, putative [Ricinus communis] >gi223533306|gb|EEF35058.1| ccr4-associated factor, putative [Ric... |
| Match: gi|255548772|ref|XP_002515442.1| |
score: 222 |
e-value: 1e-64 |
Identity: 80.77% |
Span: 390bp (49.0%) |
Frame: 1 |
| ccr4-associated factor, putative [Ricinus communis] >gi223545386|gb|EEF46891.1| ccr4-associated factor, putative [Ric... |
| Match: gi|225465506|ref|XP_002272209.1| |
score: 222 |
e-value: 1e-64 |
Identity: 80% |
Span: 390bp (49.0%) |
Frame: 1 |
| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] >gi225465508|ref|XP_002272165.1| PREDICTED: hypothetical p... |
| Match: gi|224072707|ref|XP_002303842.1| |
score: 220 |
e-value: 3e-63 |
Identity: 79.23% |
Span: 390bp (49.0%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222841274|gb|EEE78821.1| predicted protein [Populus trichocarpa] |
| Match: gi|224057551|ref|XP_002299263.1| |
score: 219 |
e-value: 8e-64 |
Identity: 80.77% |
Span: 390bp (49.0%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222846521|gb|EEE84068.1| predicted protein [Populus trichocarpa] |
| Match: gi|217072774|gb|ACJ84747.1| |
score: 216 |
e-value: 7e-63 |
Identity: 82.68% |
Span: 381bp (47.9%) |
Frame: 1 |
| unknown [Medicago truncatula] |
| Match: gi|224143289|ref|XP_002324905.1| |
score: 216 |
e-value: 2e-62 |
Identity: 80.95% |
Span: 378bp (47.5%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222866339|gb|EEF03470.1| predicted protein [Populus trichocarpa] |
| Match: gi|224092572|ref|XP_002309667.1| |
score: 214 |
e-value: 7e-63 |
Identity: 80.8% |
Span: 375bp (47.1%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222855643|gb|EEE93190.1| predicted protein [Populus trichocarpa] |
| Match: gi|255648347|gb|ACU24625.1| |
score: 214 |
e-value: 5e-63 |
Identity: 80.77% |
Span: 384bp (48.2%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|225430360|ref|XP_002285302.1| |
score: 213 |
e-value: 9e-62 |
Identity: 75.38% |
Span: 390bp (49.0%) |
Frame: 1 |
| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] >gi225430362|ref|XP_002285301.1| PREDICTED: hypothetical p... |
| Match: gi|217073063|gb|ACJ84891.1| |
score: 213 |
e-value: 7e-62 |
Identity: 81.89% |
Span: 381bp (47.9%) |
Frame: 1 |
| unknown [Medicago truncatula] |
| Match: gi|224284848|gb|ACN40154.1| |
score: 209 |
e-value: 5e-61 |
Identity: 75.38% |
Span: 390bp (49.0%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|116787179|gb|ABK24400.1| |
score: 208 |
e-value: 5e-61 |
Identity: 75.38% |
Span: 390bp (49.0%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|255572747|ref|XP_002527306.1| |
score: 53.9 |
e-value: 1e-65 |
Identity: 77.42% |
Span: 93bp (11.7%) |
Frame: 3 |
| ccr4-associated factor, putative [Ricinus communis] >gi223533306|gb|EEF35058.1| ccr4-associated factor, putative [Ric... |
| Match: gi|255648347|gb|ACU24625.1| |
score: 52.8 |
e-value: 5e-63 |
Identity: 77.42% |
Span: 93bp (11.7%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|224092572|ref|XP_002309667.1| |
score: 52.4 |
e-value: 7e-63 |
Identity: 77.42% |
Span: 93bp (11.7%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222855643|gb|EEE93190.1| predicted protein [Populus trichocarpa] |
| Match: gi|255548772|ref|XP_002515442.1| |
score: 51.2 |
e-value: 1e-64 |
Identity: 70.97% |
Span: 93bp (11.7%) |
Frame: 3 |
| ccr4-associated factor, putative [Ricinus communis] >gi223545386|gb|EEF46891.1| ccr4-associated factor, putative [Ric... |
| Match: gi|224284848|gb|ACN40154.1| |
score: 51.2 |
e-value: 5e-61 |
Identity: 74.19% |
Span: 93bp (11.7%) |
Frame: 3 |
| unknown [Picea sitchensis] |
| Match: gi|217073063|gb|ACJ84891.1| |
score: 50.8 |
e-value: 7e-62 |
Identity: 70.97% |
Span: 93bp (11.7%) |
Frame: 3 |
| unknown [Medicago truncatula] |
| Match: gi|217072774|gb|ACJ84747.1| |
score: 50.8 |
e-value: 7e-63 |
Identity: 70.97% |
Span: 93bp (11.7%) |
Frame: 3 |
| unknown [Medicago truncatula] |
| Match: gi|225465506|ref|XP_002272209.1| |
score: 50.4 |
e-value: 1e-64 |
Identity: 74.19% |
Span: 93bp (11.7%) |
Frame: 3 |
| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] >gi225465508|ref|XP_002272165.1| PREDICTED: hypothetical p... |
| Match: gi|225430360|ref|XP_002285302.1| |
score: 50.4 |
e-value: 9e-62 |
Identity: 74.19% |
Span: 93bp (11.7%) |
Frame: 3 |
| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] >gi225430362|ref|XP_002285301.1| PREDICTED: hypothetical p... |
| Match: gi|224057551|ref|XP_002299263.1| |
score: 50.4 |
e-value: 8e-64 |
Identity: 74.19% |
Span: 93bp (11.7%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222846521|gb|EEE84068.1| predicted protein [Populus trichocarpa] |
| Match: gi|224143289|ref|XP_002324905.1| |
score: 49.7 |
e-value: 2e-62 |
Identity: 70.97% |
Span: 93bp (11.7%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222866339|gb|EEF03470.1| predicted protein [Populus trichocarpa] |
| Match: gi|224072707|ref|XP_002303842.1| |
score: 48.1 |
e-value: 3e-63 |
Identity: 75.86% |
Span: 87bp (10.9%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222841274|gb|EEE78821.1| predicted protein [Populus trichocarpa] |
|
| 465 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 17 hits recorded |
| Match: At2G32070.1 |
score: 194 |
e-value: 3e-58 |
Identity: 70.99% |
Span: 390bp (49.0%) |
Frame: 1 |
| CCR4-NOT transcription complex protein, putative | chr2:13647906-13648733 REVERSE |
| Match: At1G80780.1 |
score: 193 |
e-value: 3e-56 |
Identity: 70% |
Span: 390bp (49.0%) |
Frame: 1 |
| CCR4-NOT transcription complex protein, putative | chr1:30363409-30364233 FORWARD |
| Match: At1G80780.2 |
score: 193 |
e-value: 3e-56 |
Identity: 70% |
Span: 390bp (49.0%) |
Frame: 1 |
| CCR4-NOT transcription complex protein, putative | chr1:30363409-30364233 FORWARD |
| Match: At5G10960.1 |
score: 189 |
e-value: 4e-55 |
Identity: 70.31% |
Span: 384bp (48.2%) |
Frame: 1 |
| CCR4-NOT transcription complex protein, putative | chr5:3464582-3465415 FORWARD |
| Match: At1G15920.1 |
score: 160 |
e-value: 7e-48 |
Identity: 62.02% |
Span: 369bp (46.4%) |
Frame: 1 |
| CCR4-NOT transcription complex protein, putative | chr1:5469956-5470816 FORWARD |
| Match: At1G15920.2 |
score: 160 |
e-value: 7e-48 |
Identity: 62.02% |
Span: 369bp (46.4%) |
Frame: 1 |
| CCR4-NOT transcription complex protein, putative | chr1:5469956-5470816 FORWARD |
| Match: At3G44260.1 |
score: 139 |
e-value: 4e-37 |
Identity: 50.74% |
Span: 402bp (50.5%) |
Frame: 1 |
| CCR4-NOT transcription complex protein, putative | chr3:15963200-15964042 REVERSE |
| Match: At5G22250.1 |
score: 132 |
e-value: 1e-35 |
Identity: 54.2% |
Span: 381bp (47.9%) |
Frame: 1 |
| CCR4-NOT transcription complex protein, putative | chr5:7365608-7366444 REVERSE |
| Match: At1G06450.1 |
score: 72 |
e-value: 4e-13 |
Identity: 33.9% |
Span: 354bp (44.5%) |
Frame: 1 |
| CCR4-NOT transcription complex protein, putative | chr1:1965923-1967005 FORWARD |
| Match: At2G32070.1 |
score: 50.1 |
e-value: 3e-58 |
Identity: 70.97% |
Span: 93bp (11.7%) |
Frame: 3 |
| CCR4-NOT transcription complex protein, putative | chr2:13647906-13648733 REVERSE |
| Match: At1G15920.1 |
score: 49.3 |
e-value: 7e-48 |
Identity: 63.33% |
Span: 90bp (11.3%) |
Frame: 3 |
| CCR4-NOT transcription complex protein, putative | chr1:5469956-5470816 FORWARD |
| Match: At1G15920.2 |
score: 49.3 |
e-value: 7e-48 |
Identity: 63.33% |
Span: 90bp (11.3%) |
Frame: 3 |
| CCR4-NOT transcription complex protein, putative | chr1:5469956-5470816 FORWARD |
| Match: At1G80780.1 |
score: 43.9 |
e-value: 3e-56 |
Identity: 79.17% |
Span: 72bp (9.0%) |
Frame: 3 |
| CCR4-NOT transcription complex protein, putative | chr1:30363409-30364233 FORWARD |
| Match: At5G10960.1 |
score: 43.9 |
e-value: 4e-55 |
Identity: 61.29% |
Span: 93bp (11.7%) |
Frame: 3 |
| CCR4-NOT transcription complex protein, putative | chr5:3464582-3465415 FORWARD |
| Match: At1G80780.2 |
score: 43.9 |
e-value: 3e-56 |
Identity: 79.17% |
Span: 72bp (9.0%) |
Frame: 3 |
| CCR4-NOT transcription complex protein, putative | chr1:30363409-30364233 FORWARD |
| Match: At5G22250.1 |
score: 35.8 |
e-value: 1e-35 |
Identity: 38.71% |
Span: 93bp (11.7%) |
Frame: 3 |
| CCR4-NOT transcription complex protein, putative | chr5:7365608-7366444 REVERSE |
| Match: At3G44260.1 |
score: 34.3 |
e-value: 4e-37 |
Identity: 41.94% |
Span: 93bp (11.7%) |
Frame: 3 |
| CCR4-NOT transcription complex protein, putative | chr3:15963200-15964042 REVERSE |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: Q9SKZ2 |
score: 194 |
e-value: 3e-57 |
Identity: 70.99% |
Span: 390bp (49.0%) |
Frame: 1 |
| Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2 |
| Match: Q9SAI2 |
score: 193 |
e-value: 4e-55 |
Identity: 70% |
Span: 390bp (49.0%) |
Frame: 1 |
| Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1 |
| Match: Q9LEU4 |
score: 189 |
e-value: 4e-54 |
Identity: 70.31% |
Span: 384bp (48.2%) |
Frame: 1 |
| Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1 |
| Match: Q9S9P2 |
score: 160 |
e-value: 8e-47 |
Identity: 62.02% |
Span: 369bp (46.4%) |
Frame: 1 |
| Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=2 SV=1 |
| Match: Q9LXM2 |
score: 139 |
e-value: 5e-36 |
Identity: 50.74% |
Span: 402bp (50.5%) |
Frame: 1 |
| Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana GN=CAF1-9 PE=2 SV=1 |
| Match: Q9FMS6 |
score: 132 |
e-value: 2e-34 |
Identity: 54.2% |
Span: 381bp (47.9%) |
Frame: 1 |
| Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana GN=CAF1-11 PE=2 SV=1 |
| Match: O74856 |
score: 130 |
e-value: 1e-33 |
Identity: 54.62% |
Span: 357bp (44.8%) |
Frame: 1 |
| Poly(A) ribonuclease pop2 OS=Schizosaccharomyces pombe GN=caf1 PE=1 SV=1 |
| Match: Q3ZC01 |
score: 129 |
e-value: 2e-33 |
Identity: 54.92% |
Span: 366bp (46.0%) |
Frame: 1 |
| CCR4-NOT transcription complex subunit 7 OS=Bos taurus GN=CNOT7 PE=2 SV=1 |
| Match: Q60809 |
score: 129 |
e-value: 2e-33 |
Identity: 54.92% |
Span: 366bp (46.0%) |
Frame: 1 |
| CCR4-NOT transcription complex subunit 7 OS=Mus musculus GN=Cnot7 PE=1 SV=1 |
| Match: Q9UIV1 |
score: 129 |
e-value: 2e-33 |
Identity: 54.92% |
Span: 366bp (46.0%) |
Frame: 1 |
| CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7 PE=1 SV=3 |
| Match: Q5ZJV9 |
score: 129 |
e-value: 2e-33 |
Identity: 54.92% |
Span: 366bp (46.0%) |
Frame: 1 |
| CCR4-NOT transcription complex subunit 7 OS=Gallus gallus GN=CNOT7 PE=2 SV=1 |
| Match: Q9D8X5 |
score: 127 |
e-value: 4e-34 |
Identity: 53.78% |
Span: 357bp (44.8%) |
Frame: 1 |
| CCR4-NOT transcription complex subunit 8 OS=Mus musculus GN=Cnot8 PE=2 SV=1 |
| Match: Q9UFF9 |
score: 127 |
e-value: 4e-34 |
Identity: 53.78% |
Span: 357bp (44.8%) |
Frame: 1 |
| CCR4-NOT transcription complex subunit 8 OS=Homo sapiens GN=CNOT8 PE=1 SV=1 |
| Match: Q9SKZ2 |
score: 50.1 |
e-value: 3e-57 |
Identity: 70.97% |
Span: 93bp (11.7%) |
Frame: 3 |
| Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2 |
| Match: Q9S9P2 |
score: 49.3 |
e-value: 8e-47 |
Identity: 63.33% |
Span: 90bp (11.3%) |
Frame: 3 |
| Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=2 SV=1 |
| Match: Q9LEU4 |
score: 43.9 |
e-value: 4e-54 |
Identity: 61.29% |
Span: 93bp (11.7%) |
Frame: 3 |
| Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1 |
| Match: Q9SAI2 |
score: 43.9 |
e-value: 4e-55 |
Identity: 79.17% |
Span: 72bp (9.0%) |
Frame: 3 |
| Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1 |
| Match: Q9UFF9 |
score: 39.3 |
e-value: 4e-34 |
Identity: 58.06% |
Span: 93bp (11.7%) |
Frame: 3 |
| CCR4-NOT transcription complex subunit 8 OS=Homo sapiens GN=CNOT8 PE=1 SV=1 |
| Match: Q9D8X5 |
score: 39.3 |
e-value: 4e-34 |
Identity: 58.06% |
Span: 93bp (11.7%) |
Frame: 3 |
| CCR4-NOT transcription complex subunit 8 OS=Mus musculus GN=Cnot8 PE=2 SV=1 |
| Match: Q9FMS6 |
score: 35.8 |
e-value: 2e-34 |
Identity: 38.71% |
Span: 93bp (11.7%) |
Frame: 3 |
| Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana GN=CAF1-11 PE=2 SV=1 |
| Match: Q9UIV1 |
score: 35 |
e-value: 2e-33 |
Identity: 48.39% |
Span: 93bp (11.7%) |
Frame: 3 |
| CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7 PE=1 SV=3 |
| Match: Q60809 |
score: 35 |
e-value: 2e-33 |
Identity: 48.39% |
Span: 93bp (11.7%) |
Frame: 3 |
| CCR4-NOT transcription complex subunit 7 OS=Mus musculus GN=Cnot7 PE=1 SV=1 |
| Match: Q5ZJV9 |
score: 35 |
e-value: 2e-33 |
Identity: 48.39% |
Span: 93bp (11.7%) |
Frame: 3 |
| CCR4-NOT transcription complex subunit 7 OS=Gallus gallus GN=CNOT7 PE=2 SV=1 |
| Match: Q9LXM2 |
score: 34.3 |
e-value: 5e-36 |
Identity: 41.94% |
Span: 93bp (11.7%) |
Frame: 3 |
| Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana GN=CAF1-9 PE=2 SV=1 |
| Match: O74856 |
score: 34.3 |
e-value: 1e-33 |
Identity: 45.16% |
Span: 93bp (11.7%) |
Frame: 3 |
| Poly(A) ribonuclease pop2 OS=Schizosaccharomyces pombe GN=caf1 PE=1 SV=1 |
|
| 12 lower scoring hits censored -- only 25 best hits are stored. |
