| arabidopsis/peptide [blastx] | Showing best 46 hits recorded |
| Match: At5G52040.1 |
score: 318 |
e-value: 3e-87 |
Identity: 69.83% |
Span: 720bp (90.2%) |
Frame: 2 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At4G25500.1 |
score: 318 |
e-value: 2e-87 |
Identity: 69.83% |
Span: 720bp (90.2%) |
Frame: 2 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At5G52040.2 |
score: 318 |
e-value: 3e-87 |
Identity: 69.83% |
Span: 720bp (90.2%) |
Frame: 2 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At3G61860.1 |
score: 259 |
e-value: 2e-69 |
Identity: 60.94% |
Span: 699bp (87.6%) |
Frame: 2 |
| Symbols: RSP31, ATRSP31 | ATRSP31 (ARGININE/SERINE-RICH SPLICING FACTOR 31); RNA binding | chr3:22911286-22913134 RE... |
| Match: At4G25500.2 |
score: 249 |
e-value: 1e-66 |
Identity: 69.15% |
Span: 597bp (74.8%) |
Frame: 2 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At2G46610.1 |
score: 234 |
e-value: 3e-62 |
Identity: 52.03% |
Span: 720bp (90.2%) |
Frame: 2 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19145563 REVERSE |
| Match: At2G46610.2 |
score: 190 |
e-value: 7e-49 |
Identity: 50.47% |
Span: 618bp (77.4%) |
Frame: 2 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19144929 REVERSE |
| Match: At1G02840.1 |
score: 85.1 |
e-value: 4e-17 |
Identity: 29.48% |
Span: 729bp (91.4%) |
Frame: 2 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-629583 FORWARD |
| Match: At1G02840.3 |
score: 85.1 |
e-value: 4e-17 |
Identity: 29.48% |
Span: 729bp (91.4%) |
Frame: 2 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-629583 FORWARD |
| Match: At1G02840.2 |
score: 85.1 |
e-value: 4e-17 |
Identity: 29.48% |
Span: 729bp (91.4%) |
Frame: 2 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-628995 FORWARD |
| Match: At4G02430.2 |
score: 79.3 |
e-value: 2e-15 |
Identity: 29.21% |
Span: 729bp (91.4%) |
Frame: 2 |
| pre-mRNA splicing factor, putative / SR1 protein, putative | chr4:1069186-1071313 FORWARD |
| Match: At3G49430.1 |
score: 66.6 |
e-value: 2e-11 |
Identity: 26.62% |
Span: 699bp (87.6%) |
Frame: 2 |
| Symbols: SRP34A | SRP34A (SER/ARG-RICH PROTEIN 34A); RNA binding | chr3:18343653-18345814 FORWARD |
| Match: At1G07350.1 |
score: 65.5 |
e-value: 4e-11 |
Identity: 35.21% |
Span: 393bp (49.2%) |
Frame: 2 |
| transformer serine/arginine-rich ribonucleoprotein, putative | chr1:2257730-2260099 REVERSE |
| Match: At2G37340.1 |
score: 62 |
e-value: 4e-10 |
Identity: 43.21% |
Span: 243bp (30.5%) |
Frame: 2 |
| Symbols: ATRSZ33, RSZ33 | RSZ33 (Arginine/serine-rich Zinc knuckle-containing protein 33); nucleic acid binding / nu... |
| Match: At1G09140.2 |
score: 61.6 |
e-value: 5e-10 |
Identity: 27.5% |
Span: 654bp (82.0%) |
Frame: 2 |
| Symbols: ATSRP30, ATSRP30.1, ATSRP30.2 | ATSRP30.1 (ARABIDOPSIS THALIANA SERINE/ARGININE PROTEIN 30.1); RNA binding ... |
| Match: At1G09140.1 |
score: 61.6 |
e-value: 5e-10 |
Identity: 27.5% |
Span: 654bp (82.0%) |
Frame: 2 |
| Symbols: ATSRP30, ATSRP30.1, ATSRP30.2 | ATSRP30.1 (ARABIDOPSIS THALIANA SERINE/ARGININE PROTEIN 30.1); RNA binding ... |
| Match: At3G53500.2 |
score: 60.1 |
e-value: 1e-09 |
Identity: 43.21% |
Span: 243bp (30.5%) |
Frame: 2 |
| Symbols: RSZ32 | RSZ32; nucleic acid binding | chr3:19845535-19847485 REVERSE |
| Match: At4G02430.1 |
score: 58.5 |
e-value: 4e-09 |
Identity: 40.91% |
Span: 249bp (31.2%) |
Frame: 2 |
| pre-mRNA splicing factor, putative / SR1 protein, putative | chr4:1069186-1070543 FORWARD |
| Match: At1G23860.2 |
score: 56.6 |
e-value: 2e-08 |
Identity: 32.92% |
Span: 432bp (54.1%) |
Frame: 2 |
| Symbols: RSZP21, SRZ21, SRZ-21 | SRZ-21 | chr1:8428080-8429153 REVERSE |
| Match: At1G23860.1 |
score: 56.6 |
e-value: 2e-08 |
Identity: 32.92% |
Span: 432bp (54.1%) |
Frame: 2 |
| Symbols: RSZP21, SRZ21, SRZ-21 | SRZ-21 | chr1:8428080-8429153 REVERSE |
| Match: At5G50250.1 |
score: 55.8 |
e-value: 3e-08 |
Identity: 26.82% |
Span: 489bp (61.3%) |
Frame: 2 |
| 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, p... |
| Match: At3G16380.1 |
score: 51.6 |
e-value: 5e-07 |
Identity: 28.06% |
Span: 396bp (49.6%) |
Frame: 2 |
| Symbols: PAB6 | PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | chr3:5558682-5560999... |
| Match: At1G49760.1 |
score: 50.4 |
e-value: 1e-06 |
Identity: 24.59% |
Span: 498bp (62.4%) |
Frame: 2 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At1G29400.1 |
score: 50.4 |
e-value: 1e-06 |
Identity: 29.34% |
Span: 483bp (60.5%) |
Frame: 2 |
| Symbols: AML5 | AML5 (ARABIDOPSIS MEI2-LIKE PROTEIN 5); RNA binding | chr1:10290379-10293682 REVERSE |
| Match: At1G29400.2 |
score: 50.4 |
e-value: 1e-06 |
Identity: 29.34% |
Span: 483bp (60.5%) |
Frame: 2 |
| Symbols: AML5 | AML5 (ARABIDOPSIS MEI2-LIKE PROTEIN 5); RNA binding | chr1:10290379-10293682 REVERSE |
| Match: At3G26420.1 |
score: 50.1 |
e-value: 2e-06 |
Identity: 29.91% |
Span: 297bp (37.2%) |
Frame: 2 |
| Symbols: ATRZ-1A | ATRZ-1A; RNA binding / nucleotide binding | chr3:9673190-9674292 FORWARD |
| Match: At2G23350.1 |
score: 49.3 |
e-value: 3e-06 |
Identity: 24.67% |
Span: 615bp (77.1%) |
Frame: 2 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At3G18610.1 |
score: 48.1 |
e-value: 6e-06 |
Identity: 24.19% |
Span: 654bp (82.0%) |
Frame: 2 |
| Symbols: ATRANGAP1 | ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding | chr3:6404276-6407828 REVERSE |
| Match: At4G31580.1 |
score: 47.8 |
e-value: 8e-06 |
Identity: 37.04% |
Span: 234bp (29.3%) |
Frame: 2 |
| Symbols: RSZP22, SRZ-22 | SRZ-22 (serine/arginine-rich 22) | chr4:15306989-15308070 FORWARD |
| Match: At3G13570.1 |
score: 47 |
e-value: 1e-05 |
Identity: 28.97% |
Span: 408bp (51.1%) |
Frame: 2 |
| Symbols: SCL30a | SCL30a (SC35-like splicing factor 30a); RNA binding | chr3:4429571-4431609 REVERSE |
| Match: At1G55310.2 |
score: 47 |
e-value: 1e-05 |
Identity: 26.85% |
Span: 423bp (53.0%) |
Frame: 2 |
| Symbols: ATSCL33, SCL33, SR33 | SR33 (SC35-like splicing factor 33); RNA binding | chr1:20634343-20636240 FORWARD |
| Match: At1G55310.1 |
score: 47 |
e-value: 1e-05 |
Identity: 26.85% |
Span: 423bp (53.0%) |
Frame: 2 |
| Symbols: ATSCL33, SCL33, SR33 | SR33 (SC35-like splicing factor 33); RNA binding | chr1:20634343-20636161 FORWARD |
| Match: At5G64200.2 |
score: 46.6 |
e-value: 2e-05 |
Identity: 29.81% |
Span: 435bp (54.5%) |
Frame: 2 |
| Symbols: ATSC35 | ATSC35 ("Arabidopsis thaliana arginine/serine-rich splicing factor 35, 35 kDa protein"); RNA bindi... |
| Match: At5G64200.1 |
score: 46.6 |
e-value: 2e-05 |
Identity: 29.81% |
Span: 435bp (54.5%) |
Frame: 2 |
| Symbols: ATSC35 | ATSC35 ("Arabidopsis thaliana arginine/serine-rich splicing factor 35, 35 kDa protein"); RNA bindi... |
| Match: At3G53500.2 |
score: 46.2 |
e-value: 2e-05 |
Identity: 25.97% |
Span: 375bp (47.0%) |
Frame: 2 |
| Symbols: RSZ32 | RSZ32; nucleic acid binding | chr3:19845535-19847485 REVERSE |
| Match: At1G23860.2 |
score: 46.2 |
e-value: 2e-05 |
Identity: 36.59% |
Span: 237bp (29.7%) |
Frame: 2 |
| Symbols: RSZP21, SRZ21, SRZ-21 | SRZ-21 | chr1:8428080-8429153 REVERSE |
| Match: At1G23860.1 |
score: 46.2 |
e-value: 2e-05 |
Identity: 36.59% |
Span: 237bp (29.7%) |
Frame: 2 |
| Symbols: RSZP21, SRZ21, SRZ-21 | SRZ-21 | chr1:8428080-8429153 REVERSE |
| Match: At3G27700.1 |
score: 45.4 |
e-value: 4e-05 |
Identity: 29.45% |
Span: 414bp (51.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:10258918-10262567 REVERSE |
| Match: At3G27700.2 |
score: 45.4 |
e-value: 4e-05 |
Identity: 29.45% |
Span: 414bp (51.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:10258918-10262567 REVERSE |
| Match: At2G24590.1 |
score: 45.4 |
e-value: 4e-05 |
Identity: 27.22% |
Span: 426bp (53.4%) |
Frame: 2 |
| splicing factor, putative | chr2:10456916-10457939 FORWARD |
| Match: At2G29210.1 |
score: 44.7 |
e-value: 6e-05 |
Identity: 43.66% |
Span: 210bp (26.3%) |
Frame: 2 |
| splicing factor PWI domain-containing protein | chr2:12565233-12569245 FORWARD |
| Match: At4G31580.1 |
score: 44.7 |
e-value: 6e-05 |
Identity: 28.41% |
Span: 411bp (51.5%) |
Frame: 2 |
| Symbols: RSZP22, SRZ-22 | SRZ-22 (serine/arginine-rich 22) | chr4:15306989-15308070 FORWARD |
| Match: At3G14100.1 |
score: 44.7 |
e-value: 6e-05 |
Identity: 24.58% |
Span: 495bp (62.0%) |
Frame: 2 |
| oligouridylate-binding protein, putative | chr3:4673034-4675957 FORWARD |
| Match: At3G55460.1 |
score: 44.3 |
e-value: 8e-05 |
Identity: 28.67% |
Span: 375bp (47.0%) |
Frame: 2 |
| Symbols: SCL30 | SCL30 (SC35-like splicing factor 30); RNA binding | chr3:20572001-20574479 FORWARD |
| Match: At2G37340.1 |
score: 43.9 |
e-value: 0.0001 |
Identity: 28.74% |
Span: 402bp (50.4%) |
Frame: 2 |
| Symbols: ATRSZ33, RSZ33 | RSZ33 (Arginine/serine-rich Zinc knuckle-containing protein 33); nucleic acid binding / nu... |
| Match: At5G44200.1 |
score: 43.9 |
e-value: 0.0001 |
Identity: 23.67% |
Span: 708bp (88.7%) |
Frame: 2 |
| Symbols: ATCBP20, CBP20 | CBP20 (CAP-BINDING PROTEIN 20); RNA binding | chr5:17819289-17821102 REVERSE |
|
| 65 lower scoring hits censored -- only 46 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|41323931|gb|AAS00039.1| |
score: 367 |
e-value: 3e-100 |
Identity: 75.93% |
Span: 720bp (90.2%) |
Frame: 2 |
| splicing factor-like protein [Vitis riparia] |
| Match: gi|15235112|ref|NP_194280.1| |
score: 318 |
e-value: 1e-85 |
Identity: 69.83% |
Span: 720bp (90.2%) |
Frame: 2 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi4033468|sp|P92965.2|RSP40_... |
| Match: gi|30696140|ref|NP_200017.2| |
score: 318 |
e-value: 2e-85 |
Identity: 69.83% |
Span: 720bp (90.2%) |
Frame: 2 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|30696138|ref|NP_851174.1| |
score: 318 |
e-value: 2e-85 |
Identity: 69.83% |
Span: 720bp (90.2%) |
Frame: 2 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi21542447|sp|P92966.2|RSP41... |
| Match: gi|1707370|emb|CAA67799.1| |
score: 317 |
e-value: 5e-85 |
Identity: 69.42% |
Span: 720bp (90.2%) |
Frame: 2 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|50904881|ref|XP_463929.1| |
score: 315 |
e-value: 1e-84 |
Identity: 68.31% |
Span: 714bp (89.5%) |
Frame: 2 |
| gi|50904881|ref|XP_463929.1| putative arginine/serine-rich splicing factor RSp41 [Oryza sativa (japonica cultivar-gro... |
| Match: gi|1667582|gb|AAB18813.1| |
score: 315 |
e-value: 1e-84 |
Identity: 69.01% |
Span: 720bp (90.2%) |
Frame: 2 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|7269400|emb|CAB81360.1| |
score: 314 |
e-value: 3e-84 |
Identity: 69.29% |
Span: 717bp (89.8%) |
Frame: 2 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|18412169|ref|NP_567120.1| |
score: 259 |
e-value: 1e-67 |
Identity: 60.94% |
Span: 699bp (87.6%) |
Frame: 2 |
| RSP31; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi26454661|sp|P92964.2|RSP31_A... |
| Match: gi|6899884|emb|CAB71893.1| |
score: 259 |
e-value: 1e-67 |
Identity: 60.94% |
Span: 699bp (87.6%) |
Frame: 2 |
| ARGININE/SERINE-RICH SPLICING FACTOR RSP31 [Arabidopsis thaliana] |
| Match: gi|1707366|emb|CAA67798.1| |
score: 258 |
e-value: 3e-67 |
Identity: 60.52% |
Span: 699bp (87.6%) |
Frame: 2 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|42573039|ref|NP_974616.1| |
score: 249 |
e-value: 9e-65 |
Identity: 69.15% |
Span: 597bp (74.8%) |
Frame: 2 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|50921405|ref|XP_471063.1| |
score: 237 |
e-value: 5e-61 |
Identity: 54.94% |
Span: 699bp (87.6%) |
Frame: 2 |
| gi|50921405|ref|XP_471063.1| OSJNBa0020P07.8 [Oryza sativa (japonica cultivar-group)] >gi|38344865|emb|CAE01291.2| OS... |
| Match: gi|15226019|ref|NP_182184.1| |
score: 234 |
e-value: 2e-60 |
Identity: 52.03% |
Span: 720bp (90.2%) |
Frame: 2 |
| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] >gi4415941|gb|AAD20171.1| putative arginine/ser... |
| Match: gi|47680295|gb|AAT37131.1| |
score: 226 |
e-value: 1e-57 |
Identity: 53.15% |
Span: 723bp (90.6%) |
Frame: 2 |
| arginine/serine-rich splicing factor 1 [Zea mays] >gi47680367|gb|AAT37122.1| arginine/serine-rich splicing factor 1 [... |
| Match: gi|47680305|gb|AAT37136.1| |
score: 218 |
e-value: 2e-55 |
Identity: 52.5% |
Span: 699bp (87.6%) |
Frame: 2 |
| arginine/serine-rich splicing factor 2 [Zea mays] >gi47680373|gb|AAT37127.1| arginine/serine-rich splicing factor 2 [... |
| Match: gi|47680309|gb|AAT37138.1| |
score: 203 |
e-value: 8e-51 |
Identity: 53.96% |
Span: 606bp (75.9%) |
Frame: 2 |
| gi|47680309|gb|AAT37138.1| arginine/serine-rich splicing factor 2 variant 2 [Zea mays] >gi|47680375|gb|AAT37129.1| ar... |
| Match: gi|42571257|ref|NP_973702.1| |
score: 190 |
e-value: 5e-47 |
Identity: 50.47% |
Span: 618bp (77.4%) |
Frame: 2 |
| gi|42571257|ref|NP_973702.1| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] |
| Match: gi|6759507|emb|CAB69816.1| |
score: 138 |
e-value: 3e-31 |
Identity: 62.83% |
Span: 339bp (42.5%) |
Frame: 2 |
| gi|6759507|emb|CAB69816.1| putative arginine/serine-rich splicing factor [Elaeis guineensis] |
| Match: gi|39583259|emb|CAE60051.1| |
score: 95.9 |
e-value: 2e-18 |
Identity: 32.24% |
Span: 705bp (88.3%) |
Frame: 2 |
| gi|39583259|emb|CAE60051.1| Hypothetical protein CBG03563 [Caenorhabditis briggsae] |
| Match: gi|11527011|gb|AAG36874.1| |
score: 91.7 |
e-value: 3e-17 |
Identity: 29.73% |
Span: 699bp (87.6%) |
Frame: 2 |
| gi|11527011|gb|AAG36874.1| SF2 [Caenorhabditis elegans] |
| Match: gi|25150290|ref|NP_499649.2| |
score: 91.7 |
e-value: 3e-17 |
Identity: 29.73% |
Span: 699bp (87.6%) |
Frame: 2 |
| gi|25150290|ref|NP_499649.2| serine/aRginine rich pre-mRNA SPlicing factor, SF2, substrate of the SR protein kinase S... |
| Match: gi|39582979|emb|CAE73044.1| |
score: 86.7 |
e-value: 1e-15 |
Identity: 29.14% |
Span: 693bp (86.8%) |
Frame: 2 |
| gi|39582979|emb|CAE73044.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae] |
| Match: gi|111226838|ref|XP_001134599.1| |
score: 85.5 |
e-value: 2e-15 |
Identity: 28.81% |
Span: 528bp (66.2%) |
Frame: 2 |
| RNA-binding |
| Match: gi|66820066|ref|XP_643679.1| |
score: 85.5 |
e-value: 2e-15 |
Identity: 28.81% |
Span: 528bp (66.2%) |
Frame: 2 |
| gi|66820066|ref|XP_643679.1| hypothetical protein DDB0217653 [Dictyostelium discoideum] >gi|60471815|gb|EAL69770.1| h... |
| Match: gi|2443473|gb|AAB71386.1| |
score: 85.1 |
e-value: 3e-15 |
Identity: 29.48% |
Span: 729bp (91.4%) |
Frame: 2 |
| gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana] |
| Match: gi|30678398|ref|NP_563665.3| |
score: 85.1 |
e-value: 3e-15 |
Identity: 29.48% |
Span: 729bp (91.4%) |
Frame: 2 |
| SR1; |
| Match: gi|30678395|ref|NP_850934.1| |
score: 85.1 |
e-value: 3e-15 |
Identity: 29.48% |
Span: 729bp (91.4%) |
Frame: 2 |
| gi|30678395|ref|NP_850934.1| pre-mRNA splicing factor SF2 (SR1 protein) [Arabidopsis thaliana] gi|22135918|gb|AAM9154... |
| Match: gi|50939903|ref|XP_479479.1| |
score: 83.6 |
e-value: 9e-15 |
Identity: 30.59% |
Span: 702bp (88.0%) |
Frame: 2 |
| gi|50939903|ref|XP_479479.1| putative pre-mRNA splicing factor SF2 [Oryza sativa (japonica cultivar-group)] >gi|33146... |
| Match: gi|166844|gb|AAA32856.1| |
score: 83.6 |
e-value: 9e-15 |
Identity: 29.1% |
Span: 729bp (91.4%) |
Frame: 2 |
| gi|166844|gb|AAA32856.1| ribonucleoprotein >gi|1582992|prf||2119375A Ser/Arg-rich protein |
| Match: gi|63101956|gb|AAH95586.1| |
score: 82.4 |
e-value: 2e-14 |
Identity: 29.74% |
Span: 645bp (80.8%) |
Frame: 2 |
| gi|63101956|gb|AAH95586.1| Sfrs1 protein [Danio rerio] |
| Match: gi|5815235|gb|AAD52609.1| |
score: 80.9 |
e-value: 6e-14 |
Identity: 29.04% |
Span: 729bp (91.4%) |
Frame: 2 |
| gi|5815235|gb|AAD52609.1| splicing factor SR1 [Arabidopsis thaliana] |
| Match: gi|5815239|gb|AAD52613.1| |
score: 80.9 |
e-value: 6e-14 |
Identity: 29.04% |
Span: 729bp (91.4%) |
Frame: 2 |
| gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana] |
| Match: gi|5815236|gb|AAD52610.1| |
score: 80.9 |
e-value: 6e-14 |
Identity: 29.04% |
Span: 729bp (91.4%) |
Frame: 2 |
| gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana] |
| Match: gi|5815237|gb|AAD52611.1| |
score: 80.9 |
e-value: 6e-14 |
Identity: 29.04% |
Span: 729bp (91.4%) |
Frame: 2 |
| gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana] |
| Match: gi|74152317|dbj|BAE33925.1| |
score: 80.1 |
e-value: 1e-13 |
Identity: 26.44% |
Span: 720bp (90.2%) |
Frame: 2 |
| gi|74152317|dbj|BAE33925.1| unnamed protein product [Mus musculus] >gi|26449170|dbj|BAC36925.1| unnamed protein produ... |
| Match: gi|18043896|gb|AAH19437.1| |
score: 80.1 |
e-value: 1e-13 |
Identity: 26.44% |
Span: 720bp (90.2%) |
Frame: 2 |
| gi|18043896|gb|AAH19437.1| Sfrs4 protein [Mus musculus] >gi|20978758|sp|Q8VE97|SFRS4_MOUSE Splicing factor, arginine/... |
| Match: gi|109477365|ref|XP_001064748.1| |
score: 80.1 |
e-value: 1e-13 |
Identity: 26.44% |
Span: 720bp (90.2%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|30679143|ref|NP_567235.3| |
score: 79.3 |
e-value: 2e-13 |
Identity: 29.21% |
Span: 729bp (91.4%) |
Frame: 2 |
| gi|30679143|ref|NP_567235.3| arginine/serine-rich splicing factor (atSRp34), putative [Arabidopsis thaliana] |
| Match: gi|74226809|dbj|BAE27050.1| |
score: 79.3 |
e-value: 2e-13 |
Identity: 28.23% |
Span: 669bp (83.8%) |
Frame: 2 |
| gi|74226809|dbj|BAE27050.1| unnamed protein product [Mus musculus] |
| Match: gi|47575808|ref|NP_001001248.1| |
score: 79 |
e-value: 2e-13 |
Identity: 26.32% |
Span: 699bp (87.6%) |
Frame: 2 |
| gi|47575808|ref|NP_001001248.1| hypothetical protein MGC76055 [Xenopus tropicalis] >gi|45872604|gb|AAH68213.1| Hypoth... |
| Match: gi|55792397|gb|AAV65309.1| |
score: 79 |
e-value: 2e-13 |
Identity: 29.57% |
Span: 693bp (86.8%) |
Frame: 2 |
| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare] |
| Match: gi|49900455|gb|AAH75982.1| |
score: 78.6 |
e-value: 3e-13 |
Identity: 27.52% |
Span: 711bp (89.1%) |
Frame: 2 |
| Zgc:92278 |
| Match: gi|109000263|ref|XP_001113369.1| |
score: 77.8 |
e-value: 5e-13 |
Identity: 26.4% |
Span: 714bp (89.5%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|30585347|gb|AAP36946.1| |
score: 77.8 |
e-value: 5e-13 |
Identity: 26.4% |
Span: 714bp (89.5%) |
Frame: 2 |
| gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginine/serine-rich 4 [synthetic construct] |
| Match: gi|21361282|ref|NP_005617.2| |
score: 77.8 |
e-value: 5e-13 |
Identity: 26.4% |
Span: 714bp (89.5%) |
Frame: 2 |
| gi|21361282|ref|NP_005617.2| splicing factor, arginine/serine-rich 4 [Homo sapiens] gi|20981726|sp|Q08170|SFR4_HUMAN ... |
| Match: gi|62898449|dbj|BAD97164.1| |
score: 77.8 |
e-value: 5e-13 |
Identity: 26.4% |
Span: 714bp (89.5%) |
Frame: 2 |
| gi|62898449|dbj|BAD97164.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens] |
| Match: gi|109000265|ref|XP_001113540.1| |
score: 77.8 |
e-value: 5e-13 |
Identity: 26.4% |
Span: 714bp (89.5%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|307438|gb|AAA36649.1| |
score: 77.8 |
e-value: 5e-13 |
Identity: 26.4% |
Span: 714bp (89.5%) |
Frame: 2 |
| gi|307438|gb|AAA36649.1| pre-mRNA splicing factor |
| Match: gi|68357586|ref|XP_708990.1| |
score: 77.8 |
e-value: 5e-13 |
Identity: 27.97% |
Span: 702bp (88.0%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|52140005|gb|AAU29328.1| |
score: 77.8 |
e-value: 5e-13 |
Identity: 27.14% |
Span: 717bp (89.8%) |
Frame: 2 |
| gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays] |
| Match: gi|56270156|gb|AAH87121.1| |
score: 77.8 |
e-value: 5e-13 |
Identity: 28.51% |
Span: 669bp (83.8%) |
Frame: 2 |
| Similar |
| Match: gi|76611163|ref|XP_881474.1| |
score: 77.8 |
e-value: 5e-13 |
Identity: 26.4% |
Span: 714bp (89.5%) |
Frame: 2 |
| gi|76611163|ref|XP_881474.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4 isoform 3 [Bos taurus] |
| Match: gi|109477367|ref|XP_001064632.1| |
score: 77.8 |
e-value: 5e-13 |
Identity: 26.56% |
Span: 720bp (90.2%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|55239564|gb|EAA10559.3| |
score: 77.8 |
e-value: 5e-13 |
Identity: 27.69% |
Span: 711bp (89.1%) |
Frame: 2 |
| gi|55239564|gb|EAA10559.3| ENSANGP00000021579 [Anopheles gambiae str. PEST] >gi|58387009|ref|XP_315232.2| ENSANGP0000... |
| Match: gi|52140012|gb|AAU29333.1| |
score: 77.4 |
e-value: 6e-13 |
Identity: 28.05% |
Span: 681bp (85.3%) |
Frame: 2 |
| gi|52140012|gb|AAU29333.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays] |
| Match: gi|30584231|gb|AAP36364.1| |
score: 77 |
e-value: 8e-13 |
Identity: 28.23% |
Span: 669bp (83.8%) |
Frame: 2 |
| gi|30584231|gb|AAP36364.1| Homo sapiens splicing factor, arginine/serine-rich 6 [synthetic construct] |
| Match: gi|49522053|gb|AAH74518.1| |
score: 77 |
e-value: 8e-13 |
Identity: 26.77% |
Span: 711bp (89.1%) |
Frame: 2 |
| gi|49522053|gb|AAH74518.1| MGC69563 protein [Xenopus tropicalis] >gi|52345470|ref|NP_001004783.1| MGC69563 protein [X... |
| Match: gi|74228832|dbj|BAE21902.1| |
score: 77 |
e-value: 8e-13 |
Identity: 27.82% |
Span: 669bp (83.8%) |
Frame: 2 |
| gi|74228832|dbj|BAE21902.1| unnamed protein product [Mus musculus] >gi|74197209|dbj|BAE35148.1| unnamed protein produ... |
| Match: gi|31543689|ref|NP_080775.2| |
score: 77 |
e-value: 8e-13 |
Identity: 27.82% |
Span: 669bp (83.8%) |
Frame: 2 |
| gi|31543689|ref|NP_080775.2| arginine/serine-rich splicing factor 6 [Mus musculus] gi|15080592|gb|AAH12039.1| Splicin... |
| Match: gi|20127499|ref|NP_006266.2| |
score: 77 |
e-value: 8e-13 |
Identity: 28.23% |
Span: 669bp (83.8%) |
Frame: 2 |
| gi|20127499|ref|NP_006266.2| arginine/serine-rich splicing factor 6; splicing factor, arginine/serine-rich, 55 kDa; p... |
| Match: gi|12836310|dbj|BAB23599.1| |
score: 77 |
e-value: 8e-13 |
Identity: 27.82% |
Span: 669bp (83.8%) |
Frame: 2 |
| gi|12836310|dbj|BAB23599.1| unnamed protein product [Mus musculus] |
| Match: gi|1049088|gb|AAA93073.1| |
score: 77 |
e-value: 8e-13 |
Identity: 28.23% |
Span: 669bp (83.8%) |
Frame: 2 |
| gi|1049088|gb|AAA93073.1| SRp55-1 |
| Match: gi|1049086|gb|AAA93072.1| |
score: 77 |
e-value: 8e-13 |
Identity: 28.23% |
Span: 669bp (83.8%) |
Frame: 2 |
| gi|1049086|gb|AAA93072.1| SRp55-3 |
| Match: gi|56207616|emb|CAI20591.1| |
score: 76.6 |
e-value: 1e-12 |
Identity: 28.69% |
Span: 648bp (81.2%) |
Frame: 2 |
| novel |
| Match: gi|76611169|ref|XP_870728.1| |
score: 76.6 |
e-value: 1e-12 |
Identity: 26.17% |
Span: 720bp (90.2%) |
Frame: 2 |
| gi|76611169|ref|XP_870728.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4 isoform 1 [Bos taurus] |
| Match: gi|73966552|ref|XP_866810.1| |
score: 76.3 |
e-value: 1e-12 |
Identity: 30.49% |
Span: 639bp (80.1%) |
Frame: 2 |
| gi|73966552|ref|XP_866810.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1 (ASF/SF2) isoform 8 [Canis... |
| Match: gi|68357588|ref|XP_708991.1| |
score: 76.3 |
e-value: 1e-12 |
Identity: 27.06% |
Span: 711bp (89.1%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|44890669|gb|AAH66682.1| |
score: 76.3 |
e-value: 1e-12 |
Identity: 29.13% |
Span: 639bp (80.1%) |
Frame: 2 |
| gi|44890669|gb|AAH66682.1| Splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor) [Da... |
| Match: gi|52140013|gb|AAU29334.1| |
score: 76.3 |
e-value: 1e-12 |
Identity: 28.15% |
Span: 657bp (82.3%) |
Frame: 2 |
| gi|52140013|gb|AAU29334.1| ASF/SF2-like pre-mRNA splicing factor SRP31' [Zea mays] |
| Match: gi|109477379|ref|XP_001064077.1| |
score: 75.9 |
e-value: 2e-12 |
Identity: 26.38% |
Span: 714bp (89.5%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|78369222|ref|NP_001030349.1| |
score: 75.9 |
e-value: 2e-12 |
Identity: 27.82% |
Span: 669bp (83.8%) |
Frame: 2 |
| gi|78369222|ref|NP_001030349.1| hypothetical protein LOC507828 [Bos taurus] >gi|77567850|gb|AAI07554.1| Unknown (prot... |
| Match: gi|68357578|ref|XP_687911.1| |
score: 75.5 |
e-value: 2e-12 |
Identity: 27.2% |
Span: 711bp (89.1%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|76611173|ref|XP_881776.1| |
score: 75.1 |
e-value: 3e-12 |
Identity: 27.13% |
Span: 696bp (87.2%) |
Frame: 2 |
| gi|76611173|ref|XP_881776.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4 isoform 7 [Bos taurus] |
| Match: gi|41323931|gb|AAS00039.1| |
score: 75.1 |
e-value: 3e-12 |
Identity: 29.29% |
Span: 690bp (86.5%) |
Frame: 2 |
| splicing factor-like protein [Vitis riparia] |
| Match: gi|76611177|ref|XP_881889.1| |
score: 75.1 |
e-value: 3e-12 |
Identity: 26.61% |
Span: 696bp (87.2%) |
Frame: 2 |
| gi|76611177|ref|XP_881889.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4 isoform 9 [Bos taurus] |
| Match: gi|53133810|emb|CAG32234.1| |
score: 75.1 |
e-value: 3e-12 |
Identity: 27.48% |
Span: 720bp (90.2%) |
Frame: 2 |
| gi|53133810|emb|CAG32234.1| hypothetical protein [Gallus gallus] >gi|71895047|ref|NP_001026014.1| arginine/serine-ric... |
| Match: gi|91094955|ref|XP_969451.1| |
score: 75.1 |
e-value: 3e-12 |
Identity: 26.42% |
Span: 711bp (89.1%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|68037673|gb|AAY84884.1| |
score: 74.7 |
e-value: 4e-12 |
Identity: 28.4% |
Span: 693bp (86.8%) |
Frame: 2 |
| alternative splicing regulator [Triticum aestivum] |
| Match: gi|109477369|ref|XP_001064569.1| |
score: 74.7 |
e-value: 4e-12 |
Identity: 27.17% |
Span: 717bp (89.8%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|109477375|ref|XP_001064687.1| |
score: 74.7 |
e-value: 4e-12 |
Identity: 26.55% |
Span: 642bp (80.5%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|108708089|gb|ABF95884.1| |
score: 74.3 |
e-value: 5e-12 |
Identity: 27.51% |
Span: 717bp (89.8%) |
Frame: 2 |
| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi215692748|dbj|BAG88168.... |
| Match: gi|52140015|gb|AAU29336.1| |
score: 74.3 |
e-value: 5e-12 |
Identity: 29.36% |
Span: 648bp (81.2%) |
Frame: 2 |
| gi|52140015|gb|AAU29336.1| ASF/SF2-like pre-mRNA splicing factor SRP31''' [Zea mays] |
| Match: gi|109477373|ref|XP_001064296.1| |
score: 74.3 |
e-value: 5e-12 |
Identity: 26.98% |
Span: 720bp (90.2%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|37681945|gb|AAQ97850.1| |
score: 74.3 |
e-value: 5e-12 |
Identity: 26.56% |
Span: 708bp (88.7%) |
Frame: 2 |
| gi|37681945|gb|AAQ97850.1| splicing factor, arginine/serine-rich 5 [Danio rerio] |
| Match: gi|80477004|gb|AAI08787.1| |
score: 73.9 |
e-value: 7e-12 |
Identity: 27.87% |
Span: 657bp (82.3%) |
Frame: 2 |
| Unknown |
| Match: gi|47221305|emb|CAG13241.1| |
score: 73.9 |
e-value: 7e-12 |
Identity: 26.29% |
Span: 687bp (86.1%) |
Frame: 2 |
| gi|47221305|emb|CAG13241.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|28175406|gb|AAH45210.1| |
score: 73.9 |
e-value: 7e-12 |
Identity: 27.87% |
Span: 657bp (82.3%) |
Frame: 2 |
| gi|28175406|gb|AAH45210.1| MGC52864 protein [Xenopus laevis] |
| Match: gi|76642711|ref|XP_872793.1| |
score: 73.9 |
e-value: 7e-12 |
Identity: 28.23% |
Span: 702bp (88.0%) |
Frame: 2 |
| gi|76642711|ref|XP_872793.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1 (ASF/SF2) [Bos taurus] >gi... |
| Match: gi|47209606|emb|CAF93001.1| |
score: 73.9 |
e-value: 7e-12 |
Identity: 27.52% |
Span: 714bp (89.5%) |
Frame: 2 |
| gi|47209606|emb|CAF93001.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|28302297|gb|AAH46684.1| |
score: 73.9 |
e-value: 7e-12 |
Identity: 27.94% |
Span: 714bp (89.5%) |
Frame: 2 |
| gi|28302297|gb|AAH46684.1| Similar to RNA binding motif protein 14 [Xenopus laevis] |
| Match: gi|76628195|ref|XP_883234.1| |
score: 73.9 |
e-value: 7e-12 |
Identity: 28.12% |
Span: 711bp (89.1%) |
Frame: 2 |
| gi|76628195|ref|XP_883234.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 5 (Pre-mRNA splicing factor ... |
| Match: gi|50415109|gb|AAH77356.1| |
score: 73.9 |
e-value: 7e-12 |
Identity: 27.94% |
Span: 714bp (89.5%) |
Frame: 2 |
| LOC398498 |
| Match: gi|109114623|ref|XP_001103473.1| |
score: 73.9 |
e-value: 7e-12 |
Identity: 28.23% |
Span: 702bp (88.0%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|109000268|ref|XP_001113510.1| |
score: 73.6 |
e-value: 9e-12 |
Identity: 25.9% |
Span: 717bp (89.8%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|86991440|ref|NP_008856.2| |
score: 73.2 |
e-value: 1e-11 |
Identity: 28.4% |
Span: 705bp (88.3%) |
Frame: 2 |
| splicing |
| Match: gi|41351185|gb|AAH65633.1| |
score: 73.2 |
e-value: 1e-11 |
Identity: 29.61% |
Span: 534bp (66.9%) |
Frame: 2 |
| gi|41351185|gb|AAH65633.1| Hypothetical protein LOC402952 [Danio rerio] >gi|45387723|ref|NP_991217.1| hypothetical pr... |
| Match: gi|41323931|gb|AAS00039.1| |
score: 61.2 |
e-value: 5e-08 |
Identity: 38.46% |
Span: 312bp (39.1%) |
Frame: 2 |
| splicing factor-like protein [Vitis riparia] |
| Match: gi|41323931|gb|AAS00039.1| |
score: 52 |
e-value: 3e-05 |
Identity: 42.22% |
Span: 237bp (29.7%) |
Frame: 2 |
| splicing factor-like protein [Vitis riparia] |
| Match: gi|41323931|gb|AAS00039.1| |
score: 49.7 |
e-value: 0.0001 |
Identity: 40.23% |
Span: 228bp (28.6%) |
Frame: 2 |
| splicing factor-like protein [Vitis riparia] |
|
| 208 lower scoring hits censored -- only 100 best hits are stored. |
