| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|255558636|ref|XP_002520343.1| |
score: 280 |
e-value: 1e-73 |
Identity: 74.75% |
Span: 594bp (73.5%) |
Frame: -2 |
| replication factor C / DNA polymerase III gamma-tau subunit, putative [Ricinus communis] >gi223540562|gb|EEF42129.1| ... |
| Match: gi|225459599|ref|XP_002285868.1| |
score: 279 |
e-value: 3e-73 |
Identity: 73.74% |
Span: 594bp (73.5%) |
Frame: -2 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270252386|emb|CBI18997.1| unnamed protein product [Vitis vinifera] |
| Match: gi|224066809|ref|XP_002302226.1| |
score: 270 |
e-value: 1e-70 |
Identity: 72.36% |
Span: 591bp (73.1%) |
Frame: -2 |
| predicted protein [Populus trichocarpa] >gi222843952|gb|EEE81499.1| predicted protein [Populus trichocarpa] |
| Match: gi|115449001|ref|NP_001048280.1| |
score: 262 |
e-value: 3e-68 |
Identity: 68.02% |
Span: 591bp (73.1%) |
Frame: -2 |
| Os02g0775200 [Oryza sativa (japonica cultivar-group)] >gi46805779|dbj|BAD17147.1| putative replication factor C 36kDa... |
| Match: gi|219363377|ref|NP_001136580.1| |
score: 262 |
e-value: 4e-68 |
Identity: 68.02% |
Span: 591bp (73.1%) |
Frame: -2 |
| hypothetical protein LOC100216703 [Zea mays] >gi194696262|gb|ACF82215.1| unknown [Zea mays] |
| Match: gi|242066704|ref|XP_002454641.1| |
score: 261 |
e-value: 6e-68 |
Identity: 68.02% |
Span: 591bp (73.1%) |
Frame: -2 |
| hypothetical protein SORBIDRAFT_04g034710 [Sorghum bicolor] >gi241934472|gb|EES07617.1| hypothetical protein SORBIDRA... |
| Match: gi|195628076|gb|ACG35868.1| |
score: 261 |
e-value: 6e-68 |
Identity: 68.02% |
Span: 591bp (73.1%) |
Frame: -2 |
| replication factor C subunit 3 [Zea mays] |
| Match: gi|10798790|dbj|BAB16439.1| |
score: 256 |
e-value: 1e-66 |
Identity: 66.01% |
Span: 591bp (73.1%) |
Frame: -2 |
| replication factor C 36kDa subunit [Oryza sativa Japonica Group] |
| Match: gi|15223967|ref|NP_177871.1| |
score: 253 |
e-value: 2e-65 |
Identity: 65.53% |
Span: 594bp (73.5%) |
Frame: -2 |
| replication factor C 36 kDA, putative [Arabidopsis thaliana] >gi12323400|gb|AAG51681.1|AC010704_25 putative replicati... |
| Match: gi|222623763|gb|EEE57895.1| |
score: 233 |
e-value: 1e-59 |
Identity: 62.94% |
Span: 591bp (73.1%) |
Frame: -2 |
| hypothetical protein OsJ_08571 [Oryza sativa Japonica Group] |
| Match: gi|168037225|ref|XP_001771105.1| |
score: 224 |
e-value: 6e-57 |
Identity: 58.85% |
Span: 594bp (73.5%) |
Frame: -2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162677638|gb|EDQ64106.1| predicted protein [Physcomitrella... |
| Match: gi|158254806|dbj|BAF83374.1| |
score: 187 |
e-value: 1e-45 |
Identity: 50% |
Span: 591bp (73.1%) |
Frame: -2 |
| unnamed protein product [Homo sapiens] |
| Match: gi|194306567|ref|NP_853556.2| |
score: 185 |
e-value: 4e-45 |
Identity: 49.5% |
Span: 591bp (73.1%) |
Frame: -2 |
| replication factor C subunit 5 isoform 2 [Homo sapiens] >gi194306571|ref|NP_001123585.1| replication factor C subunit... |
| Match: gi|109098914|ref|XP_001083691.1| |
score: 185 |
e-value: 4e-45 |
Identity: 49.5% |
Span: 591bp (73.1%) |
Frame: -2 |
| PREDICTED: similar to replication factor C 5 isoform 1 isoform 1 [Macaca mulatta] |
| Match: gi|109098912|ref|XP_001084022.1| |
score: 185 |
e-value: 4e-45 |
Identity: 49.5% |
Span: 591bp (73.1%) |
Frame: -2 |
| PREDICTED: similar to replication factor C 5 isoform 1 isoform 3 [Macaca mulatta] |
| Match: gi|109098916|ref|XP_001083795.1| |
score: 185 |
e-value: 4e-45 |
Identity: 49.5% |
Span: 591bp (73.1%) |
Frame: -2 |
| PREDICTED: similar to replication factor C 5 isoform 2 isoform 2 [Macaca mulatta] >gi67969441|dbj|BAE01071.1| unnamed... |
| Match: gi|194306569|ref|NP_001123584.1| |
score: 185 |
e-value: 4e-45 |
Identity: 49.5% |
Span: 591bp (73.1%) |
Frame: -2 |
| replication factor C subunit 5 isoform 3 [Homo sapiens] |
| Match: gi|47115239|emb|CAG28579.1| |
score: 185 |
e-value: 4e-45 |
Identity: 49.5% |
Span: 591bp (73.1%) |
Frame: -2 |
| RFC5 [Homo sapiens] |
| Match: gi|6677723|ref|NP_031396.1| |
score: 185 |
e-value: 4e-45 |
Identity: 49.5% |
Span: 591bp (73.1%) |
Frame: -2 |
| replication factor C subunit 5 isoform 1 [Homo sapiens] >gi728777|sp|P40937.1|RFC5_HUMAN RecName: Full=Replication fa... |
| Match: gi|158255650|dbj|BAF83796.1| |
score: 185 |
e-value: 5e-45 |
Identity: 49.5% |
Span: 591bp (73.1%) |
Frame: -2 |
| unnamed protein product [Homo sapiens] |
| Match: gi|194042984|ref|XP_001926304.1| |
score: 182 |
e-value: 3e-44 |
Identity: 48.5% |
Span: 591bp (73.1%) |
Frame: -2 |
| PREDICTED: replication factor C (activator 1) 5, 36.5kDa [Sus scrofa] |
| Match: gi|23271821|gb|AAH23674.1| |
score: 182 |
e-value: 4e-44 |
Identity: 49.5% |
Span: 591bp (73.1%) |
Frame: -2 |
| Rfc5 protein [Mus musculus] |
| Match: gi|110625924|ref|NP_082404.1| |
score: 182 |
e-value: 4e-44 |
Identity: 49.5% |
Span: 591bp (73.1%) |
Frame: -2 |
| replication factor C subunit 5 [Mus musculus] >gi30913281|sp|Q9D0F6.1|RFC5_MOUSE RecName: Full=Replication factor C s... |
| Match: gi|114647199|ref|XP_001156404.1| |
score: 182 |
e-value: 5e-44 |
Identity: 49% |
Span: 591bp (73.1%) |
Frame: -2 |
| PREDICTED: replication factor C 5 isoform 3 [Pan troglodytes] >gi114647201|ref|XP_001156460.1| PREDICTED: replication... |
| Match: gi|114647195|ref|XP_001156572.1| |
score: 182 |
e-value: 5e-44 |
Identity: 49% |
Span: 591bp (73.1%) |
Frame: -2 |
| PREDICTED: replication factor C 5 isoform 5 [Pan troglodytes] |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At1G77470.1 |
score: 253 |
e-value: 1e-67 |
Identity: 65.53% |
Span: 594bp (73.5%) |
Frame: -2 |
| replication factor C 36 kDA, putative | chr1:29117088-29119217 REVERSE |
| Match: At1G63160.1 |
score: 64.7 |
e-value: 6e-11 |
Identity: 25.64% |
Span: 585bp (72.4%) |
Frame: -2 |
| replication factor C 40 kDa, putative | chr1:23425733-23427436 REVERSE |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: P40937 |
score: 185 |
e-value: 3e-46 |
Identity: 49.5% |
Span: 591bp (73.1%) |
Frame: -2 |
| Replication factor C subunit 5 OS=Homo sapiens GN=RFC5 PE=1 SV=1 |
| Match: Q9D0F6 |
score: 182 |
e-value: 2e-45 |
Identity: 49.5% |
Span: 591bp (73.1%) |
Frame: -2 |
| Replication factor C subunit 5 OS=Mus musculus GN=Rfc5 PE=2 SV=1 |
| Match: Q54ST4 |
score: 140 |
e-value: 1e-32 |
Identity: 42.19% |
Span: 570bp (70.5%) |
Frame: -2 |
| Probable replication factor C subunit 5 OS=Dictyostelium discoideum GN=rfc5 PE=3 SV=1 |
| Match: O14003 |
score: 128 |
e-value: 4e-29 |
Identity: 36.76% |
Span: 555bp (68.7%) |
Frame: -2 |
| Replication factor C subunit 3 OS=Schizosaccharomyces pombe GN=rfc3 PE=1 SV=2 |
| Match: P34429 |
score: 111 |
e-value: 6e-24 |
Identity: 32.84% |
Span: 594bp (73.5%) |
Frame: -2 |
| Probable replication factor C subunit 5 OS=Caenorhabditis elegans GN=F44B9.8 PE=1 SV=3 |
| Match: O74111 |
score: 100 |
e-value: 1e-20 |
Identity: 32.81% |
Span: 567bp (70.2%) |
Frame: -2 |
| Replication factor C subunit 3 OS=Arxula adeninivorans GN=RFC3 PE=3 SV=1 |
| Match: P38629 |
score: 97.8 |
e-value: 7e-20 |
Identity: 32.46% |
Span: 555bp (68.7%) |
Frame: -2 |
| Replication factor C subunit 3 OS=Saccharomyces cerevisiae GN=RFC3 PE=1 SV=1 |
| Match: Q0W037 |
score: 94 |
e-value: 1e-18 |
Identity: 29.57% |
Span: 558bp (69.1%) |
Frame: -2 |
| Replication factor C small subunit OS=Uncultured methanogenic archaeon RC-I GN=rfcS PE=3 SV=1 |
| Match: Q9HN27 |
score: 91.7 |
e-value: 5e-18 |
Identity: 28.65% |
Span: 555bp (68.7%) |
Frame: -2 |
| Replication factor C small subunit OS=Halobacterium salinarium GN=rfcS PE=3 SV=1 |
| Match: B0R7H7 |
score: 91.7 |
e-value: 5e-18 |
Identity: 28.65% |
Span: 555bp (68.7%) |
Frame: -2 |
| Replication factor C small subunit OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rfcS PE=3 SV=1 |
| Match: Q977Z9 |
score: 90.9 |
e-value: 9e-18 |
Identity: 28.8% |
Span: 552bp (68.3%) |
Frame: -2 |
| Replication factor C small subunit OS=Thermoplasma volcanium GN=rfcS PE=3 SV=2 |
| Match: Q18E75 |
score: 90.5 |
e-value: 1e-17 |
Identity: 29.19% |
Span: 555bp (68.7%) |
Frame: -2 |
| Replication factor C small subunit OS=Haloquadratum walsbyi (strain DSM 16790) GN=rfcS PE=3 SV=1 |
| Match: Q6M044 |
score: 90.1 |
e-value: 2e-17 |
Identity: 29.35% |
Span: 552bp (68.3%) |
Frame: -2 |
| Replication factor C small subunit OS=Methanococcus maripaludis GN=rfcS PE=3 SV=1 |
| Match: O57852 |
score: 89.4 |
e-value: 3e-17 |
Identity: 29.41% |
Span: 561bp (69.4%) |
Frame: -2 |
| Replication factor C small subunit OS=Pyrococcus horikoshii GN=rfcS PE=3 SV=1 |
| Match: Q5JHP2 |
score: 89 |
e-value: 3e-17 |
Identity: 28.88% |
Span: 561bp (69.4%) |
Frame: -2 |
| Replication factor C small subunit OS=Pyrococcus kodakaraensis GN=rfcS PE=1 SV=1 |
| Match: A5UMF3 |
score: 89 |
e-value: 3e-17 |
Identity: 30.53% |
Span: 558bp (69.1%) |
Frame: -2 |
| Replication factor C small subunit OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rfcS PE=3 SV=1 |
| Match: A6VJ61 |
score: 88.6 |
e-value: 4e-17 |
Identity: 28.8% |
Span: 552bp (68.3%) |
Frame: -2 |
| Replication factor C small subunit OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rfcS PE=3 SV=1 |
| Match: A4FZ74 |
score: 88.6 |
e-value: 4e-17 |
Identity: 28.8% |
Span: 552bp (68.3%) |
Frame: -2 |
| Replication factor C small subunit OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rfcS PE=3 SV=1 |
| Match: Q8U4J3 |
score: 87.4 |
e-value: 1e-16 |
Identity: 29.41% |
Span: 561bp (69.4%) |
Frame: -2 |
| Replication factor C small subunit OS=Pyrococcus furiosus GN=rfcS PE=1 SV=1 |
| Match: A6US36 |
score: 87.4 |
e-value: 1e-16 |
Identity: 27.72% |
Span: 552bp (68.3%) |
Frame: -2 |
| Replication factor C small subunit OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rfcS PE=3 SV=1 |
| Match: A9A6K6 |
score: 87.4 |
e-value: 1e-16 |
Identity: 28.8% |
Span: 552bp (68.3%) |
Frame: -2 |
| Replication factor C small subunit OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rfcS PE=3 SV=1 |
| Match: Q8TZC4 |
score: 86.7 |
e-value: 2e-16 |
Identity: 30.71% |
Span: 417bp (51.6%) |
Frame: -2 |
| Replication factor C small subunit OS=Methanopyrus kandleri GN=rfcS PE=3 SV=1 |
| Match: Q3ITJ2 |
score: 86.3 |
e-value: 2e-16 |
Identity: 29.26% |
Span: 564bp (69.8%) |
Frame: -2 |
| Replication factor C small subunit OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rfcS PE=3 SV=1 |
| Match: Q9V2G4 |
score: 85.9 |
e-value: 3e-16 |
Identity: 28.96% |
Span: 549bp (67.9%) |
Frame: -2 |
| Replication factor C small subunit OS=Pyrococcus abyssi GN=rfcS PE=1 SV=1 |
| Match: Q5UZE5 |
score: 85.1 |
e-value: 5e-16 |
Identity: 27.66% |
Span: 564bp (69.8%) |
Frame: -2 |
| Replication factor C small subunit OS=Haloarcula marismortui GN=rfcS PE=3 SV=2 |
|
| 23 lower scoring hits censored -- only 25 best hits are stored. |
