| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|41059804|gb|AAR99376.1| |
score: 231 |
e-value: 9e-59 |
Identity: 54.32% |
Span: 630bp (77.4%) |
Frame: 3 |
| ring domain containing protein [Capsicum annuum] |
| Match: gi|225446337|ref|XP_002272136.1| |
score: 206 |
e-value: 2e-51 |
Identity: 47.54% |
Span: 618bp (75.9%) |
Frame: 3 |
| PREDICTED: similar to ring domain containing protein isoform 2 [Vitis vinifera] >gi225446339|ref|XP_002272107.1| PRED... |
| Match: gi|224121892|ref|XP_002330679.1| |
score: 196 |
e-value: 3e-48 |
Identity: 41.7% |
Span: 624bp (76.7%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222872283|gb|EEF09414.1| predicted protein [Populus trichocarpa] |
| Match: gi|224127182|ref|XP_002329420.1| |
score: 193 |
e-value: 2e-47 |
Identity: 44.13% |
Span: 624bp (76.7%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222870470|gb|EEF07601.1| predicted protein [Populus trichocarpa] |
| Match: gi|255639433|gb|ACU20011.1| |
score: 185 |
e-value: 4e-45 |
Identity: 45.42% |
Span: 624bp (76.7%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|255635730|gb|ACU18214.1| |
score: 178 |
e-value: 5e-43 |
Identity: 45% |
Span: 624bp (76.7%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|255553769|ref|XP_002517925.1| |
score: 174 |
e-value: 1e-41 |
Identity: 42.59% |
Span: 555bp (68.2%) |
Frame: 3 |
| rnf5, putative [Ricinus communis] >gi223542907|gb|EEF44443.1| rnf5, putative [Ricinus communis] |
| Match: gi|255638201|gb|ACU19414.1| |
score: 172 |
e-value: 4e-41 |
Identity: 43.4% |
Span: 624bp (76.7%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|225461411|ref|XP_002282248.1| |
score: 163 |
e-value: 2e-38 |
Identity: 42.32% |
Span: 624bp (76.7%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|225468785|ref|XP_002262822.1| |
score: 160 |
e-value: 2e-37 |
Identity: 44.55% |
Span: 546bp (67.1%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147810574|emb|CAN63097.1| hypothetical protein [Vitis vinifera] |
| Match: gi|224125502|ref|XP_002329821.1| |
score: 159 |
e-value: 4e-37 |
Identity: 43.06% |
Span: 555bp (68.2%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi118484396|gb|ABK94075.1| unknown [Populus trichocarpa] >gi|222870883|gb|EE... |
| Match: gi|22795037|gb|AAN05420.1| |
score: 156 |
e-value: 2e-36 |
Identity: 42.13% |
Span: 555bp (68.2%) |
Frame: 3 |
| putative RING protein [Populus tremula x Populus alba] |
| Match: gi|224077116|ref|XP_002305139.1| |
score: 155 |
e-value: 5e-36 |
Identity: 42.13% |
Span: 555bp (68.2%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222848103|gb|EEE85650.1| predicted protein [Populus trichocarpa] |
| Match: gi|255556043|ref|XP_002519056.1| |
score: 149 |
e-value: 3e-34 |
Identity: 41.63% |
Span: 552bp (67.8%) |
Frame: 3 |
| rnf5, putative [Ricinus communis] >gi223541719|gb|EEF43267.1| rnf5, putative [Ricinus communis] |
| Match: gi|255637671|gb|ACU19159.1| |
score: 147 |
e-value: 1e-33 |
Identity: 42.13% |
Span: 555bp (68.2%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|270230993|emb|CBI20320.1| |
score: 142 |
e-value: 3e-32 |
Identity: 37.39% |
Span: 681bp (83.7%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|15236326|ref|NP_192260.1| |
score: 141 |
e-value: 9e-32 |
Identity: 42.08% |
Span: 519bp (63.8%) |
Frame: 3 |
| RMA1; protein binding / ubiquitin-protein ligase/ zinc ion binding [Arabidopsis thaliana] >gi42572819|ref|NP_974506.1... |
| Match: gi|224128161|ref|XP_002329096.1| |
score: 134 |
e-value: 1e-29 |
Identity: 39.81% |
Span: 516bp (63.4%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222869765|gb|EEF06896.1| predicted protein [Populus trichocarpa] |
| Match: gi|255573345|ref|XP_002527599.1| |
score: 132 |
e-value: 4e-29 |
Identity: 38.82% |
Span: 552bp (67.8%) |
Frame: 3 |
| rnf5, putative [Ricinus communis] >gi223533016|gb|EEF34780.1| rnf5, putative [Ricinus communis] |
| Match: gi|224114956|ref|XP_002316902.1| |
score: 130 |
e-value: 1e-28 |
Identity: 37.5% |
Span: 552bp (67.8%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222859967|gb|EEE97514.1| predicted protein [Populus trichocarpa] |
| Match: gi|217071982|gb|ACJ84351.1| |
score: 130 |
e-value: 2e-28 |
Identity: 38.68% |
Span: 555bp (68.2%) |
Frame: 3 |
| unknown [Medicago truncatula] |
| Match: gi|255640217|gb|ACU20399.1| |
score: 125 |
e-value: 7e-27 |
Identity: 39.39% |
Span: 498bp (61.2%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|270238638|emb|CBI25895.1| |
score: 123 |
e-value: 2e-26 |
Identity: 47.73% |
Span: 375bp (46.1%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|15235242|ref|NP_194556.1| |
score: 120 |
e-value: 1e-25 |
Identity: 38.89% |
Span: 537bp (66.0%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] >gi1773040|gb|AAC49830.1| RING zinc finger... |
| Match: gi|223943719|gb|ACN25943.1| |
score: 113 |
e-value: 2e-23 |
Identity: 37.68% |
Span: 492bp (60.4%) |
Frame: 3 |
| unknown [Zea mays] |
|
| 220 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 12 hits recorded |
| Match: At4G03510.2 |
score: 141 |
e-value: 5e-34 |
Identity: 42.08% |
Span: 519bp (63.8%) |
Frame: 3 |
| Symbols: RMA1 | RMA1 (Ring finger protein with Membrane Anchor 1); protein binding / ubiquitin-protein ligase/ zinc ... |
| Match: At4G03510.1 |
score: 141 |
e-value: 5e-34 |
Identity: 42.08% |
Span: 519bp (63.8%) |
Frame: 3 |
| Symbols: RMA1 | RMA1 (Ring finger protein with Membrane Anchor 1); protein binding / ubiquitin-protein ligase/ zinc ... |
| Match: At4G28270.1 |
score: 120 |
e-value: 7e-28 |
Identity: 38.89% |
Span: 537bp (66.0%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr4:14007620-14008201 REVERSE |
| Match: At1G74990.1 |
score: 110 |
e-value: 1e-24 |
Identity: 47.96% |
Span: 288bp (35.4%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr1:28163498-28163911 REVERSE |
| Match: At1G19310.1 |
score: 109 |
e-value: 2e-24 |
Identity: 38.46% |
Span: 453bp (55.7%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr1:6676415-6677095 REVERSE |
| Match: At4G27470.1 |
score: 108 |
e-value: 5e-24 |
Identity: 36.31% |
Span: 423bp (52.0%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr4:13735582-13736313 FORWARD |
| Match: At3G58030.3 |
score: 105 |
e-value: 3e-23 |
Identity: 39.06% |
Span: 381bp (46.8%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr3:21496504-21497814 FORWARD |
| Match: At3G58030.2 |
score: 105 |
e-value: 3e-23 |
Identity: 39.06% |
Span: 381bp (46.8%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr3:21496504-21497814 FORWARD |
| Match: At3G58030.1 |
score: 105 |
e-value: 3e-23 |
Identity: 39.06% |
Span: 381bp (46.8%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr3:21496504-21497814 FORWARD |
| Match: At2G42030.1 |
score: 105 |
e-value: 4e-23 |
Identity: 42.28% |
Span: 369bp (45.3%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr2:17546147-17547424 REVERSE |
| Match: At2G23780.1 |
score: 100 |
e-value: 8e-22 |
Identity: 43.69% |
Span: 300bp (36.9%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) family protein | chr2:10130631-10131314 REVERSE |
| Match: At2G44410.1 |
score: 79.7 |
e-value: 2e-15 |
Identity: 39.22% |
Span: 297bp (36.5%) |
Frame: 3 |
| protein binding / zinc ion binding | chr2:18335949-18337190 FORWARD |
|
| swissprot [blastx] | Showing best 10 hits recorded |
| Match: Q99942 |
score: 89 |
e-value: 3e-17 |
Identity: 38.71% |
Span: 279bp (34.3%) |
Frame: 3 |
| E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens GN=RNF5 PE=1 SV=1 |
| Match: Q5ZIR9 |
score: 89 |
e-value: 3e-17 |
Identity: 41.3% |
Span: 276bp (33.9%) |
Frame: 3 |
| RING finger protein 185 OS=Gallus gallus GN=RNF185 PE=2 SV=1 |
| Match: Q5M807 |
score: 88.6 |
e-value: 5e-17 |
Identity: 38.71% |
Span: 279bp (34.3%) |
Frame: 3 |
| E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus GN=Rnf5 PE=2 SV=1 |
| Match: O35445 |
score: 88.6 |
e-value: 5e-17 |
Identity: 38.71% |
Span: 279bp (34.3%) |
Frame: 3 |
| E3 ubiquitin-protein ligase RNF5 OS=Mus musculus GN=Rnf5 PE=1 SV=1 |
| Match: Q568Y3 |
score: 88.2 |
e-value: 6e-17 |
Identity: 38.05% |
Span: 339bp (41.6%) |
Frame: 3 |
| RING finger protein 185 OS=Rattus norvegicus GN=Rnf185 PE=2 SV=1 |
| Match: Q91YT2 |
score: 87.4 |
e-value: 1e-16 |
Identity: 38.05% |
Span: 339bp (41.6%) |
Frame: 3 |
| RING finger protein 185 OS=Mus musculus GN=Rnf185 PE=2 SV=1 |
| Match: Q5RFK9 |
score: 86.3 |
e-value: 2e-16 |
Identity: 43.02% |
Span: 258bp (31.7%) |
Frame: 3 |
| RING finger protein 185 OS=Pongo abelii GN=RNF185 PE=2 SV=1 |
| Match: Q96GF1 |
score: 86.3 |
e-value: 2e-16 |
Identity: 43.02% |
Span: 258bp (31.7%) |
Frame: 3 |
| RING finger protein 185 OS=Homo sapiens GN=RNF185 PE=2 SV=1 |
| Match: Q6PC78 |
score: 85.5 |
e-value: 4e-16 |
Identity: 43.02% |
Span: 258bp (31.7%) |
Frame: 3 |
| RING finger protein 185 OS=Danio rerio GN=rnf185 PE=2 SV=1 |
| Match: Q09463 |
score: 81.3 |
e-value: 7e-15 |
Identity: 37.14% |
Span: 315bp (38.7%) |
Frame: 3 |
| RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5 PE=1 SV=1 |
|
