| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|15229721|ref|NP_189945.1| |
score: 81.26 |
e-value: 1.8e-14 |
Identity: 33.15% |
Span: 534bp (64.7%) |
Frame: 3 |
| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] >gi9967508|emb|CAC05633.1| putative protein [Arabidops... |
| Match: gi|16797820|gb|AAL29186.1| |
score: 43.9 |
e-value: 0.003 |
Identity: 83.33% |
Span: 54bp (6.5%) |
Frame: 3 |
| gi|16797820|gb|AAL29186.1| poly-zinc finger protein 2 [Trypanosoma cruzi] |
| Match: gi|24582360|ref|NP_723226.1| |
score: 42.74 |
e-value: 0.007 |
Identity: 29.73% |
Span: 300bp (36.4%) |
Frame: 3 |
| gi|24582360|ref|NP_723226.1| CG10203-PA [Drosophila melanogaster] gi|6433840|emb|CAB60724.1| DXl6 protein [Drosophila... |
| Match: gi|2133289|pir||S60178 |
score: 42.36 |
e-value: 0.009 |
Identity: 37.21% |
Span: 129bp (15.6%) |
Frame: 3 |
| gi|2133289|pir||S60178 gag polyprotein homolog - fungus (Fusarium oxysporum) retrotransposon skippy gi|510696|gb|AAA8... |
| Match: gi|121631|sp|P27484|GRP2_NICSY |
score: 41.59 |
e-value: 0.016 |
Identity: 61.54% |
Span: 78bp (9.5%) |
Frame: 3 |
| gi|121631|sp|P27484|GRP2_NICSY Glycine-rich protein 2 gi|72323|pir||KNNT2S glycine-rich protein 2 - wood tobacco gi|1... |
| Match: gi|15233440|ref|NP_195326.1| |
score: 41.59 |
e-value: 0.016 |
Identity: 65.22% |
Span: 69bp (8.4%) |
Frame: 3 |
| CSDP1 (cold shock domain protein 1); RNA binding / double-stranded DNA binding / nucleic acid binding / single-strand... |
| Match: gi|18450261|ref|NP_569150.1| |
score: 41.2 |
e-value: 0.021 |
Identity: 65.22% |
Span: 69bp (8.4%) |
Frame: 3 |
| gi|18450261|ref|NP_569150.1| polyprotein, cleavage products include viral coat protein and proteins with homology to ... |
| Match: gi|27476067|gb|AAO16998.1| |
score: 40.82 |
e-value: 0.028 |
Identity: 27.45% |
Span: 306bp (37.1%) |
Frame: 3 |
| Unknown protein [Oryza sativa Japonica Group] |
| Match: gi|18450271|ref|NP_569153.1| |
score: 40.82 |
e-value: 0.028 |
Identity: 73.91% |
Span: 69bp (8.4%) |
Frame: 3 |
| gi|18450271|ref|NP_569153.1| poplyprotein [citrus yellow mosaic virus] gi|16416939|gb|AAL18495.1| unknown [citrus yel... |
| Match: gi|11346381|pir||T45890 |
score: 40.43 |
e-value: 0.036 |
Identity: 34.92% |
Span: 177bp (21.5%) |
Frame: 3 |
| gi|11346381|pir||T45890 splicing factor-like protein - Arabidopsis thaliana |
| Match: gi|30693839|ref|NP_190918.3| |
score: 40.43 |
e-value: 0.036 |
Identity: 34.92% |
Span: 177bp (21.5%) |
Frame: 3 |
| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] >gi9795142|emb|CAB67657.2| splicing factor-like protei... |
| Match: gi|30693836|ref|NP_851015.1| |
score: 40.43 |
e-value: 0.036 |
Identity: 34.92% |
Span: 177bp (21.5%) |
Frame: 3 |
| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] >gi20465265|gb|AAM19952.1| AT3g53500/F4P12_200 [Arabid... |
| Match: gi|31222328|ref|XP_317163.1| |
score: 40.05 |
e-value: 0.047 |
Identity: 25.49% |
Span: 300bp (36.4%) |
Frame: 3 |
| gi|31222328|ref|XP_317163.1| ENSANGP00000018287 [Anopheles gambiae] gi|21300086|gb|EAA12231.1| ENSANGP00000018287 [An... |
| Match: gi|7494472|pir||S42136 |
score: 40.05 |
e-value: 0.047 |
Identity: 50% |
Span: 72bp (8.7%) |
Frame: 3 |
| gi|7494472|pir||S42136 cnjB protein - Tetrahymena thermophila gi|161752|gb|AAC37171.1| cnjB [Tetrahymena thermophila]... |
| Match: gi|18398546|ref|NP_565427.1| |
score: 40.05 |
e-value: 0.047 |
Identity: 65.22% |
Span: 69bp (8.4%) |
Frame: 3 |
| cold-shock DNA-binding family protein [Arabidopsis thaliana] >gi14334920|gb|AAK59638.1| putative glycine-rich, zinc-f... |
| Match: gi|7442089|pir||T00837 |
score: 40.05 |
e-value: 0.047 |
Identity: 65.22% |
Span: 69bp (8.4%) |
Frame: 3 |
| gi|7442089|pir||T00837 glycine-rich protein T13L16.11 - Arabidopsis thaliana gi|2708747|gb|AAD03571.1| putative glyci... |
| Match: gi|30687109|ref|NP_850280.1| |
score: 40.05 |
e-value: 0.047 |
Identity: 32.76% |
Span: 168bp (20.4%) |
Frame: 3 |
| RSZ33; nucleic acid binding / nucleotide binding / zinc ion binding [Arabidopsis thaliana] >gi18252179|gb|AAL61922.1|... |
| Match: gi|25386568|pir||E84791 |
score: 40.05 |
e-value: 0.047 |
Identity: 32.76% |
Span: 168bp (20.4%) |
Frame: 3 |
| gi|25386568|pir||E84791 hypothetical protein At2g37340 [imported] - Arabidopsis thaliana gi|4056488|gb|AAC98054.1| un... |
| Match: gi|37934116|gb|AAO43895.1| |
score: 39.66 |
e-value: 0.061 |
Identity: 30.91% |
Span: 165bp (20.0%) |
Frame: 3 |
| gi|37934116|gb|AAO43895.1| gag-pol fusion polyprotein [Human immunodeficiency virus 1] |
| Match: gi|9627249|ref|NP_041734.1| |
score: 39.66 |
e-value: 0.061 |
Identity: 69.57% |
Span: 69bp (8.4%) |
Frame: 3 |
| gi|9627249|ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|347871|gb|AAA03171.1| polyprotein |
| Match: gi|15236000|ref|NP_194886.1| |
score: 39.66 |
e-value: 0.061 |
Identity: 47.22% |
Span: 108bp (13.1%) |
Frame: 3 |
| SRZ-22; protein binding [Arabidopsis thaliana] >gi145334187|ref|NP_001078474.1| SRZ-22; protein binding [Arabidopsis ... |
| Match: gi|25294318|pir||T52627 |
score: 39.66 |
e-value: 0.061 |
Identity: 47.22% |
Span: 108bp (13.1%) |
Frame: 3 |
| gi|25294318|pir||T52627 splicing factor RSZp22 [validated] - Arabidopsis thaliana gi|2582645|emb|CAA05352.1| RSZp22 p... |
| Match: gi|14140126|emb|CAC39043.1| |
score: 39.66 |
e-value: 0.061 |
Identity: 28% |
Span: 150bp (18.2%) |
Frame: 3 |
| gi|14140126|emb|CAC39043.1| putative protein [Oryza sativa] |
| Match: gi|15229170|ref|NP_189872.1| |
score: 39.28 |
e-value: 0.08 |
Identity: 32.14% |
Span: 243bp (29.5%) |
Frame: 3 |
| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] >gi7529257|emb|CAB86673.1| putative protein [Arabidops... |
| Match: gi|9843663|emb|CAC03605.1| |
score: 39.28 |
e-value: 0.08 |
Identity: 35.29% |
Span: 153bp (18.5%) |
Frame: 3 |
| splicing factor RSZ33 [Arabidopsis thaliana] |
|
| arabidopsis/peptide [blastx] | Showing best 20 hits recorded |
| Match: At3g43590.1 |
score: 81.26 |
e-value: 6.3e-16 |
Identity: 33.15% |
Span: 534bp (64.7%) |
Frame: 3 |
| At3g43590.1 68410.m04301 expressed protein hexamer-binding protein HEXBP - Leishmania major, PIR:A47156 |
| Match: At4g36020.1 |
score: 41.59 |
e-value: 0.00055 |
Identity: 65.22% |
Span: 69bp (8.4%) |
Frame: 3 |
| At4g36020.1 68411.m04661 glycine-rich protein glycine-rich protein 2, wood tobacco, PIR1:KNNT2S |
| Match: At3g53500.2 |
score: 40.43 |
e-value: 0.001 |
Identity: 34.92% |
Span: 177bp (21.5%) |
Frame: 3 |
| At3g53500.2 68410.m05465 splicing factor - like protein splicing factor, arginine/serine-rich 7, Homo sapiens, PIR:A5... |
| Match: At3g53500.1 |
score: 40.43 |
e-value: 0.001 |
Identity: 34.92% |
Span: 177bp (21.5%) |
Frame: 3 |
| At3g53500.1 68410.m05464 splicing factor - like protein splicing factor, arginine/serine-rich 7, Homo sapiens, PIR:A5... |
| Match: At2g37340.1 |
score: 40.05 |
e-value: 0.002 |
Identity: 32.76% |
Span: 168bp (20.4%) |
Frame: 3 |
| At2g37340.1 68409.m04145 splicing factor RSZ33, putative nearly identical to splicing factor RSZ33 [Arabidopsis thali... |
| Match: At2g17870.1 |
score: 40.05 |
e-value: 0.002 |
Identity: 65.22% |
Span: 69bp (8.4%) |
Frame: 3 |
| At2g17870.1 68409.m01865 glycine-rich, zinc-finger DNA-binding protein -related genomic copy of EST T76328 cold-shock... |
| Match: At4g31580.1 |
score: 39.66 |
e-value: 0.002 |
Identity: 47.22% |
Span: 108bp (13.1%) |
Frame: 3 |
| At4g31580.1 68411.m04084 splicing factor SRZ_22 9G8-like serine/arginine-rich (SR) protein (Plant Cell 10,1637-1647 (... |
| Match: At3g42860.1 |
score: 39.28 |
e-value: 0.003 |
Identity: 32.14% |
Span: 243bp (29.5%) |
Frame: 3 |
| At3g42860.1 68410.m04166 expressed protein cellular nucleic acid binding protein, Mus musculus, PIR:I49259 |
| Match: At4g38680.1 |
score: 38.89 |
e-value: 0.004 |
Identity: 57.69% |
Span: 78bp (9.5%) |
Frame: 3 |
| At4g38680.1 68411.m04983 glycine-rich protein 2 (GRP2) |
| Match: At3g42860.1 |
score: 38.89 |
e-value: 0.004 |
Identity: 36.17% |
Span: 141bp (17.1%) |
Frame: 3 |
| At3g42860.1 68410.m04166 expressed protein cellular nucleic acid binding protein, Mus musculus, PIR:I49259 |
| Match: At2g24590.1 |
score: 36.96 |
e-value: 0.014 |
Identity: 28.44% |
Span: 327bp (39.6%) |
Frame: 3 |
| At2g24590.1 68409.m02659 RSZp22 splicing factor -related |
| Match: At2g21060.1 |
score: 36.96 |
e-value: 0.014 |
Identity: 65.22% |
Span: 69bp (8.4%) |
Frame: 3 |
| At2g21060.1 68409.m02265 glycine-rich protein (AtGRP2) Same as GB: U39072 |
| Match: At1g23860.1 |
score: 36.58 |
e-value: 0.018 |
Identity: 32.43% |
Span: 189bp (22.9%) |
Frame: 3 |
| At1g23860.1 68408.m02723 splicing factor SRZ_21 9G8-like serine/arginine-rich (SR) protein (Plant Cell 10,1637-1647 (... |
| Match: At3g21030.1 |
score: 36.19 |
e-value: 0.023 |
Identity: 44.12% |
Span: 96bp (11.6%) |
Frame: 3 |
| At3g21030.1 68410.m02410 hypothetical protein similar to putative retroelement pol polyprotein GB:AAD17409 from [Ara... |
| Match: At2g21060.1 |
score: 36.19 |
e-value: 0.023 |
Identity: 59.09% |
Span: 66bp (8.0%) |
Frame: 3 |
| At2g21060.1 68409.m02265 glycine-rich protein (AtGRP2) Same as GB: U39072 |
| Match: At4g12200.1 |
score: 36.19 |
e-value: 0.023 |
Identity: 27.27% |
Span: 132bp (16.0%) |
Frame: 3 |
| At4g12200.1 68411.m01750 hypothetical protein other predicted proteins, Arabidopsis thaliana |
| Match: At4g36020.1 |
score: 35.81 |
e-value: 0.03 |
Identity: 52.17% |
Span: 69bp (8.4%) |
Frame: 3 |
| At4g36020.1 68411.m04661 glycine-rich protein glycine-rich protein 2, wood tobacco, PIR1:KNNT2S |
| Match: At2g17870.1 |
score: 35.81 |
e-value: 0.03 |
Identity: 48.28% |
Span: 87bp (10.5%) |
Frame: 3 |
| At2g17870.1 68409.m01865 glycine-rich, zinc-finger DNA-binding protein -related genomic copy of EST T76328 cold-shock... |
| Match: At3g42860.1 |
score: 34.65 |
e-value: 0.068 |
Identity: 45.83% |
Span: 72bp (8.7%) |
Frame: 3 |
| At3g42860.1 68410.m04166 expressed protein cellular nucleic acid binding protein, Mus musculus, PIR:I49259 |
| Match: At4g36020.1 |
score: 34.27 |
e-value: 0.088 |
Identity: 60% |
Span: 60bp (7.3%) |
Frame: 3 |
| At4g36020.1 68411.m04661 glycine-rich protein glycine-rich protein 2, wood tobacco, PIR1:KNNT2S |
|
