| arabidopsis/peptide [blastx] | Showing best 100 hits recorded |
| Match: At2G36660.1 |
score: 296 |
e-value: 2e-80 |
Identity: 51.33% |
Span: 897bp (108.3%) |
Frame: 2 |
| Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor | chr2:15368555-153714... |
| Match: At1G49760.1 |
score: 233 |
e-value: 2e-61 |
Identity: 42.18% |
Span: 882bp (106.5%) |
Frame: 2 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At1G22760.1 |
score: 222 |
e-value: 5e-58 |
Identity: 38.77% |
Span: 954bp (115.2%) |
Frame: 2 |
| Symbols: PAB3 | PAB3 (POLY(A) BINDING PROTEIN 3); RNA binding | chr1:8055588-8058788 FORWARD |
| Match: At2G23350.1 |
score: 219 |
e-value: 2e-57 |
Identity: 38.87% |
Span: 903bp (109.1%) |
Frame: 2 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At1G71770.1 |
score: 218 |
e-value: 9e-57 |
Identity: 40.88% |
Span: 882bp (106.5%) |
Frame: 2 |
| Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN); RNA binding | chr1:26994439-26997109 REVERSE |
| Match: At3G16380.1 |
score: 186 |
e-value: 2e-47 |
Identity: 37.04% |
Span: 879bp (106.2%) |
Frame: 2 |
| Symbols: PAB6 | PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | chr3:5558682-5560999... |
| Match: At1G71770.1 |
score: 149 |
e-value: 3e-36 |
Identity: 31.58% |
Span: 858bp (103.6%) |
Frame: 2 |
| Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN); RNA binding | chr1:26994439-26997109 REVERSE |
| Match: At1G22760.1 |
score: 140 |
e-value: 2e-33 |
Identity: 29.27% |
Span: 879bp (106.2%) |
Frame: 2 |
| Symbols: PAB3 | PAB3 (POLY(A) BINDING PROTEIN 3); RNA binding | chr1:8055588-8058788 FORWARD |
| Match: At1G49760.1 |
score: 134 |
e-value: 2e-31 |
Identity: 28.82% |
Span: 816bp (98.6%) |
Frame: 2 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At1G34140.1 |
score: 133 |
e-value: 3e-31 |
Identity: 31.73% |
Span: 771bp (93.1%) |
Frame: 2 |
| Symbols: PAB1 | PAB1 (POLY(A) BINDING PROTEIN 1); RNA binding / translation initiation factor | chr1:12433334-124347... |
| Match: At2G23350.1 |
score: 131 |
e-value: 1e-30 |
Identity: 30.56% |
Span: 816bp (98.6%) |
Frame: 2 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At1G34140.1 |
score: 129 |
e-value: 4e-30 |
Identity: 35.06% |
Span: 738bp (89.1%) |
Frame: 2 |
| Symbols: PAB1 | PAB1 (POLY(A) BINDING PROTEIN 1); RNA binding / translation initiation factor | chr1:12433334-124347... |
| Match: At3G16380.1 |
score: 127 |
e-value: 2e-29 |
Identity: 29.47% |
Span: 810bp (97.8%) |
Frame: 2 |
| Symbols: PAB6 | PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | chr3:5558682-5560999... |
| Match: At2G36660.1 |
score: 115 |
e-value: 6e-26 |
Identity: 29.08% |
Span: 804bp (97.1%) |
Frame: 2 |
| Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor | chr2:15368555-153714... |
| Match: At4G34110.1 |
score: 111 |
e-value: 9e-25 |
Identity: 30.74% |
Span: 657bp (79.3%) |
Frame: 2 |
| Symbols: PAB2 | PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding | chr4:16337714-16339896 FORWARD |
| Match: At1G34140.1 |
score: 110 |
e-value: 3e-24 |
Identity: 33.71% |
Span: 483bp (58.3%) |
Frame: 2 |
| Symbols: PAB1 | PAB1 (POLY(A) BINDING PROTEIN 1); RNA binding / translation initiation factor | chr1:12433334-124347... |
| Match: At2G23350.1 |
score: 110 |
e-value: 2e-24 |
Identity: 32.8% |
Span: 510bp (61.6%) |
Frame: 2 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At1G49760.1 |
score: 99.8 |
e-value: 4e-21 |
Identity: 33.69% |
Span: 510bp (61.6%) |
Frame: 2 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At5G19350.1 |
score: 97.4 |
e-value: 2e-20 |
Identity: 27.17% |
Span: 726bp (87.7%) |
Frame: 2 |
| RNA-binding protein 45 (RBP45), putative | chr5:6518980-6521297 FORWARD |
| Match: At2G36660.1 |
score: 96.7 |
e-value: 3e-20 |
Identity: 32.45% |
Span: 510bp (61.6%) |
Frame: 2 |
| Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor | chr2:15368555-153714... |
| Match: At1G47490.1 |
score: 94 |
e-value: 2e-19 |
Identity: 27.35% |
Span: 630bp (76.1%) |
Frame: 2 |
| Symbols: ATRBP47C | ATRBP47C; RNA binding | chr1:17427241-17429622 FORWARD |
| Match: At1G11650.1 |
score: 92.8 |
e-value: 4e-19 |
Identity: 25.31% |
Span: 663bp (80.1%) |
Frame: 2 |
| Symbols: ATRBP45B | ATRBP45B; RNA binding | chr1:3914895-3917301 FORWARD |
| Match: At1G11650.2 |
score: 92.8 |
e-value: 4e-19 |
Identity: 25.31% |
Span: 663bp (80.1%) |
Frame: 2 |
| Symbols: ATRBP45B | ATRBP45B; RNA binding | chr1:3914895-3917941 FORWARD |
| Match: At4G34110.1 |
score: 91.3 |
e-value: 1e-18 |
Identity: 30.11% |
Span: 510bp (61.6%) |
Frame: 2 |
| Symbols: PAB2 | PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding | chr4:16337714-16339896 FORWARD |
| Match: At1G49600.1 |
score: 91.3 |
e-value: 1e-18 |
Identity: 25.52% |
Span: 630bp (76.1%) |
Frame: 2 |
| Symbols: ATRBP47A | ATRBP47A (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47A); RNA binding | chr1:18360904-18363818 RE... |
| Match: At3G19130.1 |
score: 88.6 |
e-value: 8e-18 |
Identity: 25.82% |
Span: 630bp (76.1%) |
Frame: 2 |
| Symbols: ATRBP47B | ATRBP47B (RNA-BINDING PROTEIN 47B); RNA binding | chr3:6611404-6613829 REVERSE |
| Match: At2G18510.1 |
score: 87.4 |
e-value: 2e-17 |
Identity: 34.32% |
Span: 501bp (60.5%) |
Frame: 2 |
| Symbols: EMB2444 | EMB2444 (EMBRYO DEFECTIVE 2444); RNA binding | chr2:8038636-8040599 REVERSE |
| Match: At1G47500.1 |
score: 84 |
e-value: 2e-16 |
Identity: 25.21% |
Span: 630bp (76.1%) |
Frame: 2 |
| Symbols: ATRBP47C' | ATRBP47C' (RNA-BINDING PROTEIN 47C'); RNA binding | chr1:17435122-17437245 FORWARD |
| Match: At3G13224.2 |
score: 82.4 |
e-value: 6e-16 |
Identity: 26.32% |
Span: 498bp (60.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256628 FORWARD |
| Match: At5G54900.1 |
score: 82 |
e-value: 8e-16 |
Identity: 23.38% |
Span: 630bp (76.1%) |
Frame: 2 |
| Symbols: ATRBP45A | ATRBP45A (RNA-BINDING PROTEIN 45A); RNA binding | chr5:22312638-22315352 FORWARD |
| Match: At3G13224.1 |
score: 81.6 |
e-value: 1e-15 |
Identity: 26.16% |
Span: 501bp (60.5%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256021 FORWARD |
| Match: At1G47490.1 |
score: 81.3 |
e-value: 1e-15 |
Identity: 30.86% |
Span: 468bp (56.5%) |
Frame: 2 |
| Symbols: ATRBP47C | ATRBP47C; RNA binding | chr1:17427241-17429622 FORWARD |
| Match: At1G47500.1 |
score: 80.9 |
e-value: 2e-15 |
Identity: 30.86% |
Span: 468bp (56.5%) |
Frame: 2 |
| Symbols: ATRBP47C' | ATRBP47C' (RNA-BINDING PROTEIN 47C'); RNA binding | chr1:17435122-17437245 FORWARD |
| Match: At3G19130.1 |
score: 79 |
e-value: 6e-15 |
Identity: 30.65% |
Span: 465bp (56.2%) |
Frame: 2 |
| Symbols: ATRBP47B | ATRBP47B (RNA-BINDING PROTEIN 47B); RNA binding | chr3:6611404-6613829 REVERSE |
| Match: At4G27000.1 |
score: 78.6 |
e-value: 8e-15 |
Identity: 23.58% |
Span: 630bp (76.1%) |
Frame: 2 |
| RNA-binding protein 45 (RBP45), putative | chr4:13554989-13557769 REVERSE |
| Match: At1G47490.2 |
score: 78.6 |
e-value: 8e-15 |
Identity: 28.65% |
Span: 483bp (58.3%) |
Frame: 2 |
| Symbols: ATRBP47C | ATRBP47C; RNA binding | chr1:17427241-17428554 FORWARD |
| Match: At1G17370.1 |
score: 77.4 |
e-value: 2e-14 |
Identity: 23.75% |
Span: 684bp (82.6%) |
Frame: 2 |
| Symbols: UBP1B | UBP1B (OLIGOURIDYLATE BINDING PROTEIN 1B); mRNA 3'-UTR binding | chr1:5951835-5954818 REVERSE |
| Match: At3G14100.1 |
score: 77 |
e-value: 2e-14 |
Identity: 24.14% |
Span: 684bp (82.6%) |
Frame: 2 |
| oligouridylate-binding protein, putative | chr3:4673034-4675957 FORWARD |
| Match: At1G49600.1 |
score: 76.6 |
e-value: 3e-14 |
Identity: 29.83% |
Span: 465bp (56.2%) |
Frame: 2 |
| Symbols: ATRBP47A | ATRBP47A (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47A); RNA binding | chr1:18360904-18363818 RE... |
| Match: At5G47620.1 |
score: 75.5 |
e-value: 7e-14 |
Identity: 26.44% |
Span: 465bp (56.2%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr5:19319774-19321504 REVERSE |
| Match: At5G47620.2 |
score: 75.5 |
e-value: 7e-14 |
Identity: 26.44% |
Span: 465bp (56.2%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr5:19319774-19321504 REVERSE |
| Match: At1G54080.1 |
score: 74.7 |
e-value: 1e-13 |
Identity: 23.08% |
Span: 681bp (82.2%) |
Frame: 2 |
| Symbols: UBP1A | UBP1A; mRNA 3'-UTR binding | chr1:20187591-20190492 REVERSE |
| Match: At3G52150.2 |
score: 73.6 |
e-value: 3e-13 |
Identity: 27.43% |
Span: 483bp (58.3%) |
Frame: 2 |
| RNA binding | chr3:19353052-19354068 FORWARD |
| Match: At2G37220.1 |
score: 73.6 |
e-value: 3e-13 |
Identity: 26.74% |
Span: 483bp (58.3%) |
Frame: 2 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr2:15642059-15643410 REVERSE |
| Match: At3G52150.1 |
score: 73.6 |
e-value: 3e-13 |
Identity: 27.43% |
Span: 483bp (58.3%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:19353052-19354068 FORWARD |
| Match: At5G54900.1 |
score: 70.9 |
e-value: 2e-12 |
Identity: 27.84% |
Span: 474bp (57.2%) |
Frame: 2 |
| Symbols: ATRBP45A | ATRBP45A (RNA-BINDING PROTEIN 45A); RNA binding | chr5:22312638-22315352 FORWARD |
| Match: At1G54080.2 |
score: 70.5 |
e-value: 2e-12 |
Identity: 23.11% |
Span: 681bp (82.2%) |
Frame: 2 |
| Symbols: UBP1A | UBP1A; mRNA 3'-UTR binding | chr1:20187591-20190492 REVERSE |
| Match: At4G27000.1 |
score: 70.5 |
e-value: 2e-12 |
Identity: 27.43% |
Span: 474bp (57.2%) |
Frame: 2 |
| RNA-binding protein 45 (RBP45), putative | chr4:13554989-13557769 REVERSE |
| Match: At5G50250.1 |
score: 70.5 |
e-value: 2e-12 |
Identity: 25.79% |
Span: 453bp (54.7%) |
Frame: 2 |
| 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, p... |
| Match: At4G26650.2 |
score: 70.1 |
e-value: 3e-12 |
Identity: 23.65% |
Span: 609bp (73.6%) |
Frame: 2 |
| RNA binding | chr4:13445271-13447598 FORWARD |
| Match: At4G26650.1 |
score: 70.1 |
e-value: 3e-12 |
Identity: 23.65% |
Span: 609bp (73.6%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr4:13445558-13447598 FORWARD |
| Match: At4G36960.1 |
score: 69.7 |
e-value: 4e-12 |
Identity: 27.98% |
Span: 495bp (59.8%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr4:17427345-17429584 FORWARD |
| Match: At4G24770.1 |
score: 68.9 |
e-value: 7e-12 |
Identity: 27.04% |
Span: 453bp (54.7%) |
Frame: 2 |
| Symbols: ATRBP31, CP31, ATRBP33, RBP31 | RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding | chr4:12766233-12767962 RE... |
| Match: At3G52660.2 |
score: 68.9 |
e-value: 7e-12 |
Identity: 22.75% |
Span: 684bp (82.6%) |
Frame: 2 |
| RNA binding | chr3:19533576-19535713 FORWARD |
| Match: At4G34110.1 |
score: 68.9 |
e-value: 7e-12 |
Identity: 26.14% |
Span: 459bp (55.4%) |
Frame: 2 |
| Symbols: PAB2 | PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding | chr4:16337714-16339896 FORWARD |
| Match: At3G52660.1 |
score: 68.9 |
e-value: 7e-12 |
Identity: 22.75% |
Span: 684bp (82.6%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:19533576-19535713 FORWARD |
| Match: At1G01080.1 |
score: 68.6 |
e-value: 9e-12 |
Identity: 27.46% |
Span: 528bp (63.8%) |
Frame: 2 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative | chr1:45503-46789 REVERSE |
| Match: At3G52380.1 |
score: 68.6 |
e-value: 9e-12 |
Identity: 25.88% |
Span: 450bp (54.3%) |
Frame: 2 |
| Symbols: PDE322, CP33 | CP33 (PIGMENT DEFECTIVE 322); RNA binding | chr3:19432597-19433833 FORWARD |
| Match: At4G16280.3 |
score: 67.8 |
e-value: 1e-11 |
Identity: 26.63% |
Span: 492bp (59.4%) |
Frame: 2 |
| Symbols: FCA | FCA (FCA); RNA binding | chr4:9208580-9214428 REVERSE |
| Match: At4G16280.2 |
score: 67.8 |
e-value: 1e-11 |
Identity: 26.63% |
Span: 492bp (59.4%) |
Frame: 2 |
| Symbols: FCA | FCA (FCA); RNA binding | chr4:9207180-9214428 REVERSE |
| Match: At5G19350.1 |
score: 67.4 |
e-value: 2e-11 |
Identity: 24.87% |
Span: 480bp (58.0%) |
Frame: 2 |
| RNA-binding protein 45 (RBP45), putative | chr5:6518980-6521297 FORWARD |
| Match: At5G50250.1 |
score: 67.4 |
e-value: 2e-11 |
Identity: 24.61% |
Span: 546bp (65.9%) |
Frame: 2 |
| 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, p... |
| Match: At1G60000.1 |
score: 67 |
e-value: 3e-11 |
Identity: 25.61% |
Span: 477bp (57.6%) |
Frame: 2 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr1:22097343-22098205 REVERSE |
| Match: At4G19610.1 |
score: 67 |
e-value: 3e-11 |
Identity: 29.47% |
Span: 534bp (64.5%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr4:10677675-10681633 FORWARD |
| Match: At1G11650.2 |
score: 66.6 |
e-value: 3e-11 |
Identity: 26% |
Span: 546bp (65.9%) |
Frame: 2 |
| Symbols: ATRBP45B | ATRBP45B; RNA binding | chr1:3914895-3917941 FORWARD |
| Match: At3G07810.1 |
score: 65.5 |
e-value: 7e-11 |
Identity: 22.16% |
Span: 519bp (62.7%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495058 FORWARD |
| Match: At4G00830.2 |
score: 65.5 |
e-value: 7e-11 |
Identity: 26.29% |
Span: 675bp (81.5%) |
Frame: 2 |
| RNA binding | chr4:352782-354965 FORWARD |
| Match: At4G00830.1 |
score: 65.5 |
e-value: 7e-11 |
Identity: 26.29% |
Span: 675bp (81.5%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr4:352782-354965 FORWARD |
| Match: At3G07810.2 |
score: 65.5 |
e-value: 7e-11 |
Identity: 22.16% |
Span: 519bp (62.7%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495108 FORWARD |
| Match: At5G40490.1 |
score: 64.7 |
e-value: 1e-10 |
Identity: 23.24% |
Span: 531bp (64.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:16242711-16244651 FORWARD |
| Match: At1G01080.2 |
score: 63.9 |
e-value: 2e-10 |
Identity: 27.32% |
Span: 528bp (63.8%) |
Frame: 2 |
| RNA binding | chr1:45503-46789 REVERSE |
| Match: At5G55550.1 |
score: 63.5 |
e-value: 3e-10 |
Identity: 23.46% |
Span: 468bp (56.5%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:22519303-22520884 REVERSE |
| Match: At5G55550.2 |
score: 63.5 |
e-value: 3e-10 |
Identity: 23.46% |
Span: 468bp (56.5%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
| Match: At5G55550.3 |
score: 63.5 |
e-value: 3e-10 |
Identity: 23.46% |
Span: 468bp (56.5%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
| Match: At1G01080.2 |
score: 62.8 |
e-value: 5e-10 |
Identity: 30.07% |
Span: 414bp (50.0%) |
Frame: 2 |
| RNA binding | chr1:45503-46789 REVERSE |
| Match: At4G24770.1 |
score: 61.6 |
e-value: 1e-09 |
Identity: 23.7% |
Span: 507bp (61.2%) |
Frame: 2 |
| Symbols: ATRBP31, CP31, ATRBP33, RBP31 | RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding | chr4:12766233-12767962 RE... |
| Match: At1G45100.1 |
score: 61.6 |
e-value: 1e-09 |
Identity: 28.24% |
Span: 387bp (46.7%) |
Frame: 2 |
| polyadenylate-binding protein, putative / PABP, putative | chr1:17053071-17054629 FORWARD |
| Match: At2G35410.1 |
score: 61.6 |
e-value: 1e-09 |
Identity: 27.7% |
Span: 414bp (50.0%) |
Frame: 2 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative | chr2:14905420-14906669 FORWARD |
| Match: At1G45100.1 |
score: 61.6 |
e-value: 1e-09 |
Identity: 22.58% |
Span: 714bp (86.2%) |
Frame: 2 |
| polyadenylate-binding protein, putative / PABP, putative | chr1:17053071-17054629 FORWARD |
| Match: At4G14300.1 |
score: 61.2 |
e-value: 1e-09 |
Identity: 22.53% |
Span: 495bp (59.8%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr4:8231175-8232781 FORWARD |
| Match: At3G18610.1 |
score: 61.2 |
e-value: 1e-09 |
Identity: 25.97% |
Span: 432bp (52.2%) |
Frame: 2 |
| Symbols: ATRANGAP1 | ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding | chr3:6404276-6407828 REVERSE |
| Match: At1G01080.1 |
score: 60.5 |
e-value: 2e-09 |
Identity: 29.61% |
Span: 414bp (50.0%) |
Frame: 2 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative | chr1:45503-46789 REVERSE |
| Match: At3G07810.2 |
score: 59.3 |
e-value: 5e-09 |
Identity: 25% |
Span: 456bp (55.1%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495108 FORWARD |
| Match: At3G07810.1 |
score: 59.3 |
e-value: 5e-09 |
Identity: 25% |
Span: 456bp (55.1%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495058 FORWARD |
| Match: At2G18510.1 |
score: 57.8 |
e-value: 2e-08 |
Identity: 28.08% |
Span: 429bp (51.8%) |
Frame: 2 |
| Symbols: EMB2444 | EMB2444 (EMBRYO DEFECTIVE 2444); RNA binding | chr2:8038636-8040599 REVERSE |
| Match: At2G35410.1 |
score: 55.8 |
e-value: 6e-08 |
Identity: 25.77% |
Span: 447bp (54.0%) |
Frame: 2 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative | chr2:14905420-14906669 FORWARD |
| Match: At4G26650.2 |
score: 54.3 |
e-value: 2e-07 |
Identity: 26.75% |
Span: 420bp (50.7%) |
Frame: 2 |
| RNA binding | chr4:13445271-13447598 FORWARD |
| Match: At4G26650.1 |
score: 54.3 |
e-value: 2e-07 |
Identity: 26.75% |
Span: 420bp (50.7%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr4:13445558-13447598 FORWARD |
| Match: At5G40490.1 |
score: 52.4 |
e-value: 6e-07 |
Identity: 25.62% |
Span: 474bp (57.2%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:16242711-16244651 FORWARD |
| Match: At5G55550.2 |
score: 50.4 |
e-value: 2e-06 |
Identity: 23.87% |
Span: 423bp (51.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
| Match: At5G55550.1 |
score: 50.4 |
e-value: 2e-06 |
Identity: 23.87% |
Span: 423bp (51.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:22519303-22520884 REVERSE |
| Match: At5G55550.3 |
score: 50.4 |
e-value: 2e-06 |
Identity: 23.87% |
Span: 423bp (51.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
| Match: At3G52380.1 |
score: 50.1 |
e-value: 3e-08 |
Identity: 25% |
Span: 711bp (85.9%) |
Frame: 2 |
| Symbols: PDE322, CP33 | CP33 (PIGMENT DEFECTIVE 322); RNA binding | chr3:19432597-19433833 FORWARD |
| Match: At3G52150.1 |
score: 49.3 |
e-value: 5e-06 |
Identity: 36.36% |
Span: 231bp (27.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:19353052-19354068 FORWARD |
| Match: At3G52150.2 |
score: 49.3 |
e-value: 5e-06 |
Identity: 36.36% |
Span: 231bp (27.9%) |
Frame: 2 |
| RNA binding | chr3:19353052-19354068 FORWARD |
| Match: At4G24770.1 |
score: 48.1 |
e-value: 1e-05 |
Identity: 32.93% |
Span: 246bp (29.7%) |
Frame: 2 |
| Symbols: ATRBP31, CP31, ATRBP33, RBP31 | RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding | chr4:12766233-12767962 RE... |
| Match: At2G37220.1 |
score: 47 |
e-value: 3e-05 |
Identity: 33.73% |
Span: 249bp (30.1%) |
Frame: 2 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr2:15642059-15643410 REVERSE |
| Match: At5G50250.1 |
score: 46.2 |
e-value: 5e-05 |
Identity: 31.71% |
Span: 246bp (29.7%) |
Frame: 2 |
| 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, p... |
| Match: At4G34110.1 |
score: 44.7 |
e-value: 0.0001 |
Identity: 32.14% |
Span: 252bp (30.4%) |
Frame: 2 |
| Symbols: PAB2 | PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding | chr4:16337714-16339896 FORWARD |
| Match: At3G52380.1 |
score: 26.6 |
e-value: 3e-08 |
Identity: 34.38% |
Span: 96bp (11.6%) |
Frame: 1 |
| Symbols: PDE322, CP33 | CP33 (PIGMENT DEFECTIVE 322); RNA binding | chr3:19432597-19433833 FORWARD |
|
| 220 lower scoring hits censored -- only 100 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|15228016|ref|NP_181204.1| |
score: 296 |
e-value: 1e-78 |
Identity: 51.33% |
Span: 897bp (108.3%) |
Frame: 2 |
| gi|15228016|ref|NP_181204.1| polyadenylate-binding protein (PABP), putative [Arabidopsis thaliana] gi|12229883|sp|Q9Z... |
| Match: gi|108707490|gb|ABF95285.1| |
score: 267 |
e-value: 8e-70 |
Identity: 47.04% |
Span: 912bp (110.1%) |
Frame: 2 |
| polyadenylate |
| Match: gi|92873940|gb|ABE82276.1| |
score: 248 |
e-value: 5e-64 |
Identity: 41.97% |
Span: 915bp (110.5%) |
Frame: 2 |
| RNA-binding |
| Match: gi|13560783|gb|AAK30205.1| |
score: 247 |
e-value: 1e-63 |
Identity: 43.79% |
Span: 918bp (110.9%) |
Frame: 2 |
| gi|13560783|gb|AAK30205.1| poly(A)-binding protein [Daucus carota] |
| Match: gi|3876087|emb|CAA90446.1| |
score: 244 |
e-value: 5e-63 |
Identity: 39.74% |
Span: 924bp (111.6%) |
Frame: 2 |
| Hypothetical |
| Match: gi|3876085|emb|CAA90444.1| |
score: 244 |
e-value: 5e-63 |
Identity: 39.74% |
Span: 924bp (111.6%) |
Frame: 2 |
| Hypothetical |
| Match: gi|39596513|emb|CAE63132.1| |
score: 241 |
e-value: 8e-62 |
Identity: 40.63% |
Span: 924bp (111.6%) |
Frame: 2 |
| gi|39596513|emb|CAE63132.1| Hypothetical protein CBG07431 [Caenorhabditis briggsae] |
| Match: gi|7270360|emb|CAB80128.1| |
score: 239 |
e-value: 3e-61 |
Identity: 41.45% |
Span: 912bp (110.1%) |
Frame: 2 |
| gi|7270360|emb|CAB80128.1| poly(A)-binding protein [Arabidopsis thaliana] >gi|2911051|emb|CAA17561.1| poly(A)-binding... |
| Match: gi|7673355|gb|AAF66823.1| |
score: 239 |
e-value: 3e-61 |
Identity: 41.78% |
Span: 912bp (110.1%) |
Frame: 2 |
| gi|7673355|gb|AAF66823.1| poly(A)-binding protein [Nicotiana tabacum] |
| Match: gi|19347816|gb|AAL86321.1| |
score: 239 |
e-value: 3e-61 |
Identity: 41.45% |
Span: 912bp (110.1%) |
Frame: 2 |
| putative poly(A)-binding protein [Arabidopsis thaliana] |
| Match: gi|50898502|ref|XP_450039.1| |
score: 238 |
e-value: 7e-61 |
Identity: 41.38% |
Span: 948bp (114.5%) |
Frame: 2 |
| gi|50898502|ref|XP_450039.1| putative poly(A)-binding protein [Oryza sativa (japonica cultivar-group)] >gi|51963704|r... |
| Match: gi|92888900|gb|ABE89613.1| |
score: 237 |
e-value: 9e-61 |
Identity: 41.31% |
Span: 912bp (110.1%) |
Frame: 2 |
| polyadenylate |
| Match: gi|92877413|gb|ABE84531.1| |
score: 235 |
e-value: 4e-60 |
Identity: 40.45% |
Span: 942bp (113.8%) |
Frame: 2 |
| Polyadenylate |
| Match: gi|7528270|gb|AAF63202.1| |
score: 234 |
e-value: 7e-60 |
Identity: 41.78% |
Span: 912bp (110.1%) |
Frame: 2 |
| gi|7528270|gb|AAF63202.1| poly(A)-binding protein [Cucumis sativus] |
| Match: gi|34015145|gb|AAQ56342.1| |
score: 233 |
e-value: 1e-59 |
Identity: 42.86% |
Span: 882bp (106.5%) |
Frame: 2 |
| gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|50944003|ref|XP_481529.1| |
score: 233 |
e-value: 1e-59 |
Identity: 42.86% |
Span: 882bp (106.5%) |
Frame: 2 |
| gi|50944003|ref|XP_481529.1| putative poly(A)-binding protein [Oryza sativa (japonica cultivar-group)] >gi|35215184|d... |
| Match: gi|18402769|ref|NP_564554.1| |
score: 233 |
e-value: 2e-59 |
Identity: 42.18% |
Span: 882bp (106.5%) |
Frame: 2 |
| PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor [Arabidopsis thaliana] >gi10120431|gb|A... |
| Match: gi|173421|gb|AAA35320.1| |
score: 233 |
e-value: 2e-59 |
Identity: 39.81% |
Span: 921bp (111.2%) |
Frame: 2 |
| gi|173421|gb|AAA35320.1| poly(A)-binding protein |
| Match: gi|2104439|emb|CAB08762.1| |
score: 232 |
e-value: 3e-59 |
Identity: 39.81% |
Span: 921bp (111.2%) |
Frame: 2 |
| pab1 |
| Match: gi|55962218|emb|CAI12299.1| |
score: 230 |
e-value: 1e-58 |
Identity: 41.55% |
Span: 882bp (106.5%) |
Frame: 2 |
| poly(A) |
| Match: gi|1737492|gb|AAB38974.1| |
score: 230 |
e-value: 1e-58 |
Identity: 40.44% |
Span: 948bp (114.5%) |
Frame: 2 |
| poly(A)-binding protein [Triticum aestivum] |
| Match: gi|55962217|emb|CAI12298.1| |
score: 230 |
e-value: 1e-58 |
Identity: 41.55% |
Span: 882bp (106.5%) |
Frame: 2 |
| gi|55962217|emb|CAI12298.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Homo sapiens] >gi|55959639|emb|C... |
| Match: gi|48734702|gb|AAH71591.1| |
score: 230 |
e-value: 1e-58 |
Identity: 41.55% |
Span: 882bp (106.5%) |
Frame: 2 |
| gi|48734702|gb|AAH71591.1| Unknown (protein for MGC:87368) [Homo sapiens] |
| Match: gi|4504715|ref|NP_003810.1| |
score: 230 |
e-value: 1e-58 |
Identity: 41.55% |
Span: 882bp (106.5%) |
Frame: 2 |
| gi|4504715|ref|NP_003810.1| poly A binding protein, cytoplasmic 4; inducible poly(A)-binding protein; poly(A)-binding... |
| Match: gi|76689295|ref|XP_881806.1| |
score: 229 |
e-value: 3e-58 |
Identity: 41.22% |
Span: 882bp (106.5%) |
Frame: 2 |
| gi|76689295|ref|XP_881806.1| PREDICTED: similar to poly(A) binding protein, cytoplasmic 4 isoform 1 isoform 18 [Bos t... |
| Match: gi|31560656|ref|NP_032800.2| |
score: 229 |
e-value: 3e-58 |
Identity: 41.22% |
Span: 882bp (106.5%) |
Frame: 2 |
| gi|31560656|ref|NP_032800.2| poly A binding protein, cytoplasmic 1; poly A binding protein 1 [Mus musculus] gi|132780... |
| Match: gi|76689291|ref|XP_881690.1| |
score: 229 |
e-value: 3e-58 |
Identity: 41.22% |
Span: 882bp (106.5%) |
Frame: 2 |
| gi|76689291|ref|XP_881690.1| PREDICTED: similar to poly(A) binding protein, cytoplasmic 4 isoform 2 isoform 16 [Bos t... |
| Match: gi|41388837|gb|AAH65540.1| |
score: 229 |
e-value: 2e-58 |
Identity: 41.55% |
Span: 882bp (106.5%) |
Frame: 2 |
| gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens] |
| Match: gi|76689293|ref|XP_881752.1| |
score: 229 |
e-value: 3e-58 |
Identity: 41.22% |
Span: 882bp (106.5%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|76689289|ref|XP_881630.1| |
score: 229 |
e-value: 3e-58 |
Identity: 41.22% |
Span: 882bp (106.5%) |
Frame: 2 |
| gi|76689289|ref|XP_881630.1| PREDICTED: similar to poly(A) binding protein, cytoplasmic 4 isoform 1 isoform 15 [Bos t... |
| Match: gi|76689285|ref|XP_881509.1| |
score: 229 |
e-value: 3e-58 |
Identity: 41.22% |
Span: 882bp (106.5%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|76689287|ref|XP_881565.1| |
score: 229 |
e-value: 3e-58 |
Identity: 41.22% |
Span: 882bp (106.5%) |
Frame: 2 |
| gi|76689287|ref|XP_881565.1| PREDICTED: similar to poly(A) binding protein, cytoplasmic 4 isoform 2 isoform 14 [Bos t... |
| Match: gi|19705459|ref|NP_599180.1| |
score: 229 |
e-value: 3e-58 |
Identity: 41.22% |
Span: 882bp (106.5%) |
Frame: 2 |
| gi|19705459|ref|NP_599180.1| poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus] gi|12188891|emb|CAC21554.1| p... |
| Match: gi|76689283|ref|XP_881449.1| |
score: 229 |
e-value: 3e-58 |
Identity: 41.22% |
Span: 882bp (106.5%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|92873940|gb|ABE82276.1| |
score: 147 |
e-value: 2e-33 |
Identity: 33.33% |
Span: 816bp (98.6%) |
Frame: 2 |
| RNA-binding |
| Match: gi|19347816|gb|AAL86321.1| |
score: 145 |
e-value: 6e-33 |
Identity: 31.09% |
Span: 888bp (107.2%) |
Frame: 2 |
| putative poly(A)-binding protein [Arabidopsis thaliana] |
| Match: gi|7270360|emb|CAB80128.1| |
score: 145 |
e-value: 6e-33 |
Identity: 31.09% |
Span: 888bp (107.2%) |
Frame: 2 |
| gi|7270360|emb|CAB80128.1| poly(A)-binding protein [Arabidopsis thaliana] >gi|2911051|emb|CAA17561.1| poly(A)-binding... |
| Match: gi|31560656|ref|NP_032800.2| |
score: 143 |
e-value: 2e-32 |
Identity: 32.18% |
Span: 810bp (97.8%) |
Frame: 2 |
| gi|31560656|ref|NP_032800.2| poly A binding protein, cytoplasmic 1; poly A binding protein 1 [Mus musculus] gi|132780... |
| Match: gi|19705459|ref|NP_599180.1| |
score: 143 |
e-value: 2e-32 |
Identity: 32.18% |
Span: 810bp (97.8%) |
Frame: 2 |
| gi|19705459|ref|NP_599180.1| poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus] gi|12188891|emb|CAC21554.1| p... |
| Match: gi|7528270|gb|AAF63202.1| |
score: 138 |
e-value: 7e-31 |
Identity: 32.73% |
Span: 774bp (93.5%) |
Frame: 2 |
| gi|7528270|gb|AAF63202.1| poly(A)-binding protein [Cucumis sativus] |
| Match: gi|7673355|gb|AAF66823.1| |
score: 137 |
e-value: 1e-30 |
Identity: 32.64% |
Span: 816bp (98.6%) |
Frame: 2 |
| gi|7673355|gb|AAF66823.1| poly(A)-binding protein [Nicotiana tabacum] |
| Match: gi|92888900|gb|ABE89613.1| |
score: 137 |
e-value: 1e-30 |
Identity: 29.23% |
Span: 924bp (111.6%) |
Frame: 2 |
| polyadenylate |
| Match: gi|13560783|gb|AAK30205.1| |
score: 136 |
e-value: 3e-30 |
Identity: 29.39% |
Span: 888bp (107.2%) |
Frame: 2 |
| gi|13560783|gb|AAK30205.1| poly(A)-binding protein [Daucus carota] |
| Match: gi|1737492|gb|AAB38974.1| |
score: 134 |
e-value: 1e-29 |
Identity: 29.53% |
Span: 846bp (102.2%) |
Frame: 2 |
| poly(A)-binding protein [Triticum aestivum] |
| Match: gi|92877413|gb|ABE84531.1| |
score: 134 |
e-value: 1e-29 |
Identity: 31.64% |
Span: 777bp (93.8%) |
Frame: 2 |
| Polyadenylate |
| Match: gi|18402769|ref|NP_564554.1| |
score: 134 |
e-value: 1e-29 |
Identity: 28.82% |
Span: 816bp (98.6%) |
Frame: 2 |
| PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor [Arabidopsis thaliana] >gi10120431|gb|A... |
| Match: gi|50898502|ref|XP_450039.1| |
score: 132 |
e-value: 3e-29 |
Identity: 29.01% |
Span: 831bp (100.4%) |
Frame: 2 |
| gi|50898502|ref|XP_450039.1| putative poly(A)-binding protein [Oryza sativa (japonica cultivar-group)] >gi|51963704|r... |
| Match: gi|39596513|emb|CAE63132.1| |
score: 132 |
e-value: 5e-29 |
Identity: 28.57% |
Span: 948bp (114.5%) |
Frame: 2 |
| gi|39596513|emb|CAE63132.1| Hypothetical protein CBG07431 [Caenorhabditis briggsae] |
| Match: gi|3876085|emb|CAA90444.1| |
score: 132 |
e-value: 2e-32 |
Identity: 34.65% |
Span: 699bp (84.4%) |
Frame: 2 |
| Hypothetical |
| Match: gi|3876087|emb|CAA90446.1| |
score: 132 |
e-value: 2e-32 |
Identity: 34.65% |
Span: 699bp (84.4%) |
Frame: 2 |
| Hypothetical |
| Match: gi|4504715|ref|NP_003810.1| |
score: 131 |
e-value: 9e-29 |
Identity: 29.45% |
Span: 819bp (98.9%) |
Frame: 2 |
| gi|4504715|ref|NP_003810.1| poly A binding protein, cytoplasmic 4; inducible poly(A)-binding protein; poly(A)-binding... |
| Match: gi|55962217|emb|CAI12298.1| |
score: 131 |
e-value: 9e-29 |
Identity: 29.45% |
Span: 819bp (98.9%) |
Frame: 2 |
| gi|55962217|emb|CAI12298.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Homo sapiens] >gi|55959639|emb|C... |
| Match: gi|55962218|emb|CAI12299.1| |
score: 131 |
e-value: 9e-29 |
Identity: 29.45% |
Span: 819bp (98.9%) |
Frame: 2 |
| poly(A) |
| Match: gi|48734702|gb|AAH71591.1| |
score: 131 |
e-value: 9e-29 |
Identity: 29.45% |
Span: 819bp (98.9%) |
Frame: 2 |
| gi|48734702|gb|AAH71591.1| Unknown (protein for MGC:87368) [Homo sapiens] |
| Match: gi|76689291|ref|XP_881690.1| |
score: 130 |
e-value: 1e-28 |
Identity: 29.45% |
Span: 819bp (98.9%) |
Frame: 2 |
| gi|76689291|ref|XP_881690.1| PREDICTED: similar to poly(A) binding protein, cytoplasmic 4 isoform 2 isoform 16 [Bos t... |
| Match: gi|41388837|gb|AAH65540.1| |
score: 130 |
e-value: 1e-28 |
Identity: 29.45% |
Span: 819bp (98.9%) |
Frame: 2 |
| gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens] |
| Match: gi|76689295|ref|XP_881806.1| |
score: 130 |
e-value: 1e-28 |
Identity: 29.45% |
Span: 819bp (98.9%) |
Frame: 2 |
| gi|76689295|ref|XP_881806.1| PREDICTED: similar to poly(A) binding protein, cytoplasmic 4 isoform 1 isoform 18 [Bos t... |
| Match: gi|76689289|ref|XP_881630.1| |
score: 130 |
e-value: 1e-28 |
Identity: 29.45% |
Span: 819bp (98.9%) |
Frame: 2 |
| gi|76689289|ref|XP_881630.1| PREDICTED: similar to poly(A) binding protein, cytoplasmic 4 isoform 1 isoform 15 [Bos t... |
| Match: gi|76689293|ref|XP_881752.1| |
score: 130 |
e-value: 1e-28 |
Identity: 29.45% |
Span: 819bp (98.9%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|76689287|ref|XP_881565.1| |
score: 130 |
e-value: 1e-28 |
Identity: 29.45% |
Span: 819bp (98.9%) |
Frame: 2 |
| gi|76689287|ref|XP_881565.1| PREDICTED: similar to poly(A) binding protein, cytoplasmic 4 isoform 2 isoform 14 [Bos t... |
| Match: gi|76689283|ref|XP_881449.1| |
score: 130 |
e-value: 1e-28 |
Identity: 29.45% |
Span: 819bp (98.9%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|76689285|ref|XP_881509.1| |
score: 130 |
e-value: 1e-28 |
Identity: 29.45% |
Span: 819bp (98.9%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|173421|gb|AAA35320.1| |
score: 127 |
e-value: 2e-27 |
Identity: 32.25% |
Span: 774bp (93.5%) |
Frame: 2 |
| gi|173421|gb|AAA35320.1| poly(A)-binding protein |
| Match: gi|50944003|ref|XP_481529.1| |
score: 127 |
e-value: 1e-27 |
Identity: 29.82% |
Span: 924bp (111.6%) |
Frame: 2 |
| gi|50944003|ref|XP_481529.1| putative poly(A)-binding protein [Oryza sativa (japonica cultivar-group)] >gi|35215184|d... |
| Match: gi|2104439|emb|CAB08762.1| |
score: 126 |
e-value: 3e-27 |
Identity: 31.88% |
Span: 774bp (93.5%) |
Frame: 2 |
| pab1 |
| Match: gi|34015145|gb|AAQ56342.1| |
score: 126 |
e-value: 2e-27 |
Identity: 30.25% |
Span: 891bp (107.6%) |
Frame: 2 |
| gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|108707490|gb|ABF95285.1| |
score: 125 |
e-value: 6e-29 |
Identity: 30.96% |
Span: 672bp (81.2%) |
Frame: 2 |
| polyadenylate |
| Match: gi|15228016|ref|NP_181204.1| |
score: 115 |
e-value: 5e-24 |
Identity: 29.08% |
Span: 804bp (97.1%) |
Frame: 2 |
| gi|15228016|ref|NP_181204.1| polyadenylate-binding protein (PABP), putative [Arabidopsis thaliana] gi|12229883|sp|Q9Z... |
| Match: gi|76689291|ref|XP_881690.1| |
score: 114 |
e-value: 1e-23 |
Identity: 34.48% |
Span: 561bp (67.8%) |
Frame: 2 |
| gi|76689291|ref|XP_881690.1| PREDICTED: similar to poly(A) binding protein, cytoplasmic 4 isoform 2 isoform 16 [Bos t... |
| Match: gi|76689295|ref|XP_881806.1| |
score: 114 |
e-value: 1e-23 |
Identity: 34.48% |
Span: 561bp (67.8%) |
Frame: 2 |
| gi|76689295|ref|XP_881806.1| PREDICTED: similar to poly(A) binding protein, cytoplasmic 4 isoform 1 isoform 18 [Bos t... |
| Match: gi|48734702|gb|AAH71591.1| |
score: 114 |
e-value: 1e-23 |
Identity: 34.48% |
Span: 561bp (67.8%) |
Frame: 2 |
| gi|48734702|gb|AAH71591.1| Unknown (protein for MGC:87368) [Homo sapiens] |
| Match: gi|76689285|ref|XP_881509.1| |
score: 114 |
e-value: 1e-23 |
Identity: 34.48% |
Span: 561bp (67.8%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|4504715|ref|NP_003810.1| |
score: 114 |
e-value: 1e-23 |
Identity: 34.48% |
Span: 561bp (67.8%) |
Frame: 2 |
| gi|4504715|ref|NP_003810.1| poly A binding protein, cytoplasmic 4; inducible poly(A)-binding protein; poly(A)-binding... |
| Match: gi|76689289|ref|XP_881630.1| |
score: 114 |
e-value: 1e-23 |
Identity: 34.48% |
Span: 561bp (67.8%) |
Frame: 2 |
| gi|76689289|ref|XP_881630.1| PREDICTED: similar to poly(A) binding protein, cytoplasmic 4 isoform 1 isoform 15 [Bos t... |
| Match: gi|41388837|gb|AAH65540.1| |
score: 114 |
e-value: 1e-23 |
Identity: 34.48% |
Span: 561bp (67.8%) |
Frame: 2 |
| gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens] |
| Match: gi|55962218|emb|CAI12299.1| |
score: 114 |
e-value: 1e-23 |
Identity: 34.48% |
Span: 561bp (67.8%) |
Frame: 2 |
| poly(A) |
| Match: gi|55962217|emb|CAI12298.1| |
score: 114 |
e-value: 1e-23 |
Identity: 34.48% |
Span: 561bp (67.8%) |
Frame: 2 |
| gi|55962217|emb|CAI12298.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Homo sapiens] >gi|55959639|emb|C... |
| Match: gi|76689293|ref|XP_881752.1| |
score: 114 |
e-value: 1e-23 |
Identity: 34.48% |
Span: 561bp (67.8%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|76689287|ref|XP_881565.1| |
score: 114 |
e-value: 1e-23 |
Identity: 34.48% |
Span: 561bp (67.8%) |
Frame: 2 |
| gi|76689287|ref|XP_881565.1| PREDICTED: similar to poly(A) binding protein, cytoplasmic 4 isoform 2 isoform 14 [Bos t... |
| Match: gi|7528270|gb|AAF63202.1| |
score: 111 |
e-value: 7e-23 |
Identity: 34.92% |
Span: 516bp (62.3%) |
Frame: 2 |
| gi|7528270|gb|AAF63202.1| poly(A)-binding protein [Cucumis sativus] |
| Match: gi|13560783|gb|AAK30205.1| |
score: 108 |
e-value: 5e-22 |
Identity: 32.26% |
Span: 510bp (61.6%) |
Frame: 2 |
| gi|13560783|gb|AAK30205.1| poly(A)-binding protein [Daucus carota] |
| Match: gi|92873940|gb|ABE82276.1| |
score: 107 |
e-value: 1e-21 |
Identity: 32.62% |
Span: 510bp (61.6%) |
Frame: 2 |
| RNA-binding |
| Match: gi|7673355|gb|AAF66823.1| |
score: 105 |
e-value: 5e-21 |
Identity: 33.33% |
Span: 510bp (61.6%) |
Frame: 2 |
| gi|7673355|gb|AAF66823.1| poly(A)-binding protein [Nicotiana tabacum] |
| Match: gi|31560656|ref|NP_032800.2| |
score: 102 |
e-value: 3e-20 |
Identity: 32.02% |
Span: 561bp (67.8%) |
Frame: 2 |
| gi|31560656|ref|NP_032800.2| poly A binding protein, cytoplasmic 1; poly A binding protein 1 [Mus musculus] gi|132780... |
| Match: gi|19705459|ref|NP_599180.1| |
score: 102 |
e-value: 3e-20 |
Identity: 32.02% |
Span: 561bp (67.8%) |
Frame: 2 |
| gi|19705459|ref|NP_599180.1| poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus] gi|12188891|emb|CAC21554.1| p... |
| Match: gi|92877413|gb|ABE84531.1| |
score: 102 |
e-value: 4e-20 |
Identity: 32.8% |
Span: 510bp (61.6%) |
Frame: 2 |
| Polyadenylate |
| Match: gi|18402769|ref|NP_564554.1| |
score: 99.8 |
e-value: 3e-19 |
Identity: 33.69% |
Span: 510bp (61.6%) |
Frame: 2 |
| PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor [Arabidopsis thaliana] >gi10120431|gb|A... |
| Match: gi|108707490|gb|ABF95285.1| |
score: 97.8 |
e-value: 1e-18 |
Identity: 32.62% |
Span: 510bp (61.6%) |
Frame: 2 |
| polyadenylate |
| Match: gi|15228016|ref|NP_181204.1| |
score: 96.7 |
e-value: 2e-18 |
Identity: 32.45% |
Span: 510bp (61.6%) |
Frame: 2 |
| gi|15228016|ref|NP_181204.1| polyadenylate-binding protein (PABP), putative [Arabidopsis thaliana] gi|12229883|sp|Q9Z... |
| Match: gi|173421|gb|AAA35320.1| |
score: 91.3 |
e-value: 1e-16 |
Identity: 28.19% |
Span: 516bp (62.3%) |
Frame: 2 |
| gi|173421|gb|AAA35320.1| poly(A)-binding protein |
| Match: gi|19347816|gb|AAL86321.1| |
score: 91.3 |
e-value: 1e-16 |
Identity: 30.11% |
Span: 510bp (61.6%) |
Frame: 2 |
| putative poly(A)-binding protein [Arabidopsis thaliana] |
| Match: gi|7270360|emb|CAB80128.1| |
score: 91.3 |
e-value: 1e-16 |
Identity: 30.11% |
Span: 510bp (61.6%) |
Frame: 2 |
| gi|7270360|emb|CAB80128.1| poly(A)-binding protein [Arabidopsis thaliana] >gi|2911051|emb|CAA17561.1| poly(A)-binding... |
| Match: gi|2104439|emb|CAB08762.1| |
score: 91.3 |
e-value: 1e-16 |
Identity: 28.19% |
Span: 516bp (62.3%) |
Frame: 2 |
| pab1 |
| Match: gi|3876085|emb|CAA90444.1| |
score: 85.1 |
e-value: 7e-15 |
Identity: 29.26% |
Span: 510bp (61.6%) |
Frame: 2 |
| Hypothetical |
| Match: gi|3876087|emb|CAA90446.1| |
score: 85.1 |
e-value: 7e-15 |
Identity: 29.26% |
Span: 510bp (61.6%) |
Frame: 2 |
| Hypothetical |
| Match: gi|3876087|emb|CAA90446.1| |
score: 50.8 |
e-value: 0.0001 |
Identity: 32.53% |
Span: 249bp (30.1%) |
Frame: 2 |
| Hypothetical |
| Match: gi|3876085|emb|CAA90444.1| |
score: 50.8 |
e-value: 0.0001 |
Identity: 32.53% |
Span: 249bp (30.1%) |
Frame: 2 |
| Hypothetical |
| Match: gi|3876085|emb|CAA90444.1| |
score: 32.7 |
e-value: 2e-32 |
Identity: 44.12% |
Span: 102bp (12.3%) |
Frame: 1 |
| Hypothetical |
| Match: gi|3876087|emb|CAA90446.1| |
score: 32.7 |
e-value: 2e-32 |
Identity: 44.12% |
Span: 102bp (12.3%) |
Frame: 1 |
| Hypothetical |
| Match: gi|108707490|gb|ABF95285.1| |
score: 26.9 |
e-value: 6e-29 |
Identity: 41.18% |
Span: 102bp (12.3%) |
Frame: 1 |
| polyadenylate |
|
| 639 lower scoring hits censored -- only 100 best hits are stored. |
