| genbank/nr [blastx] | Showing best 28 hits recorded |
| Match: gi|15222264|ref|NP_177683.1| |
score: 180.3 |
e-value: 5e-72 |
Identity: 58.52% |
Span: 516bp (62.1%) |
Frame: 3 |
| transcription initiation factor IIF beta subunit (TFIIF-beta) family protein [Arabidopsis thaliana] >gi9369371|gb|AAF... |
| Match: gi|34909946|ref|NP_916320.1| |
score: 166.8 |
e-value: 7.7e-64 |
Identity: 54.91% |
Span: 516bp (62.1%) |
Frame: 3 |
| gi|34909946|ref|NP_916320.1| putative transcription initiation factor [Oryza sativa (japonica cultivar-group)] gi|201... |
| Match: gi|15231173|ref|NP_190795.1| |
score: 129 |
e-value: 1e-50 |
Identity: 48.18% |
Span: 357bp (43.0%) |
Frame: 3 |
| gi|15231173|ref|NP_190795.1| transcription initiation factor IIF, beta subunit -related [Arabidopsis thaliana] |
| Match: gi|11285686|pir||T46097 |
score: 129 |
e-value: 4.6e-48 |
Identity: 48.18% |
Span: 357bp (43.0%) |
Frame: 3 |
| gi|11285686|pir||T46097 hypothetical protein T25B15.40 - Arabidopsis thaliana gi|10045560|emb|CAC07918.1| putative pr... |
| Match: gi|15222264|ref|NP_177683.1| |
score: 114.4 |
e-value: 5e-72 |
Identity: 82.35% |
Span: 204bp (24.5%) |
Frame: 1 |
| transcription initiation factor IIF beta subunit (TFIIF-beta) family protein [Arabidopsis thaliana] >gi9369371|gb|AAF... |
| Match: gi|34909946|ref|NP_916320.1| |
score: 100.5 |
e-value: 7.7e-64 |
Identity: 68.66% |
Span: 201bp (24.2%) |
Frame: 1 |
| gi|34909946|ref|NP_916320.1| putative transcription initiation factor [Oryza sativa (japonica cultivar-group)] gi|201... |
| Match: gi|15231173|ref|NP_190795.1| |
score: 94.36 |
e-value: 1e-50 |
Identity: 56.16% |
Span: 219bp (26.4%) |
Frame: 1 |
| gi|15231173|ref|NP_190795.1| transcription initiation factor IIF, beta subunit -related [Arabidopsis thaliana] |
| Match: gi|11285686|pir||T46097 |
score: 85.5 |
e-value: 4.6e-48 |
Identity: 48.24% |
Span: 219bp (26.4%) |
Frame: 1 |
| gi|11285686|pir||T46097 hypothetical protein T25B15.40 - Arabidopsis thaliana gi|10045560|emb|CAC07918.1| putative pr... |
| Match: gi|19073998|ref|NP_584604.1| |
score: 55.84 |
e-value: 7.9e-10 |
Identity: 38.46% |
Span: 195bp (23.5%) |
Frame: 1 |
| gi|19073998|ref|NP_584604.1| TRANSCRIPTION INITIATION FACTOR TFIIF BETA SUBUNIT [Encephalitozoon cuniculi] gi|1906864... |
| Match: gi|19111874|ref|NP_595082.1| |
score: 51.6 |
e-value: 1.6e-05 |
Identity: 45.45% |
Span: 165bp (19.9%) |
Frame: 1 |
| gi|19111874|ref|NP_595082.1| transcription initiation factor iif, beta subunit [Schizosaccharomyces pombe] gi|7493495... |
| Match: gi|38174399|gb|AAH61312.1| |
score: 51.6 |
e-value: 3.9e-08 |
Identity: 39.29% |
Span: 168bp (20.2%) |
Frame: 1 |
| gi|38174399|gb|AAH61312.1| Unknown (protein for MGC:75790) [Silurana tropicalis] |
| Match: gi|464520|sp|Q03123|T2FB_XENLA |
score: 50.45 |
e-value: 3.5e-05 |
Identity: 39.29% |
Span: 168bp (20.2%) |
Frame: 1 |
| gi|464520|sp|Q03123|T2FB_XENLA TRANSCRIPTION INITIATION FACTOR IIF, BETA SUBUNIT (TFIIF-BETA) (TRANSCRIPTION INITIATI... |
| Match: gi|31199641|ref|XP_308768.1| |
score: 48.91 |
e-value: 0.0001 |
Identity: 42.31% |
Span: 156bp (18.8%) |
Frame: 1 |
| gi|31199641|ref|XP_308768.1| ENSANGP00000015059 [Anopheles gambiae] gi|21291899|gb|EAA04044.1| ENSANGP00000015059 [An... |
| Match: gi|24645751|ref|NP_524305.2| |
score: 48.52 |
e-value: 0.00013 |
Identity: 40.38% |
Span: 156bp (18.8%) |
Frame: 1 |
| gi|24645751|ref|NP_524305.2| Transcription factor TFIIFbeta CG6538-PA [Drosophila melanogaster] gi|1729817|sp|P41900|... |
| Match: gi|450771|gb|AAA81888.1| |
score: 48.52 |
e-value: 0.00013 |
Identity: 40.38% |
Span: 156bp (18.8%) |
Frame: 1 |
| gi|450771|gb|AAA81888.1| dTFIIF30 |
| Match: gi|1362632|pir||S55766 |
score: 48.52 |
e-value: 0.00013 |
Identity: 40.38% |
Span: 156bp (18.8%) |
Frame: 1 |
| gi|1362632|pir||S55766 transcription initiation factor TFIIF small chain - fruit fly (Drosophila melanogaster) (fragm... |
| Match: gi|86901|pir||S06141 |
score: 46.98 |
e-value: 0.00039 |
Identity: 41.82% |
Span: 165bp (19.9%) |
Frame: 1 |
| gi|86901|pir||S06141 ATP-dependent DNA helicase RAP30/74 chain RAP30 - human gi|226503|prf||1515353A transcription in... |
| Match: gi|4758488|ref|NP_004119.1| |
score: 46.59 |
e-value: 0.00051 |
Identity: 42.59% |
Span: 162bp (19.5%) |
Frame: 1 |
| gi|4758488|ref|NP_004119.1| general transcription factor IIF, polypeptide 2 (30kD subunit) [Homo sapiens] gi|464519|s... |
| Match: gi|400922|sp|Q01750|T2FB_RAT |
score: 46.21 |
e-value: 0.00067 |
Identity: 40.74% |
Span: 162bp (19.5%) |
Frame: 1 |
| gi|400922|sp|Q01750|T2FB_RAT Transcription initiation factor IIF, beta subunit (TFIIF-beta) (Transcription initiation... |
| Match: gi|20072603|gb|AAH27173.1| |
score: 46.21 |
e-value: 0.00067 |
Identity: 40.74% |
Span: 162bp (19.5%) |
Frame: 1 |
| gi|20072603|gb|AAH27173.1| Gtf2f2 protein [Mus musculus] |
| Match: gi|31542922|ref|NP_112304.2| |
score: 46.21 |
e-value: 0.00067 |
Identity: 40.74% |
Span: 162bp (19.5%) |
Frame: 1 |
| gi|31542922|ref|NP_112304.2| general transcription factor IIF, polypeptide 2 (30kD subunit) [Rattus norvegicus] gi|47... |
| Match: gi|6321442|ref|NP_011519.1| |
score: 45.05 |
e-value: 0.001 |
Identity: 38.18% |
Span: 165bp (19.9%) |
Frame: 1 |
| gi|6321442|ref|NP_011519.1| transcription initiation factor TFIIF middle subunit; Tfg2p [Saccharomyces cerevisiae] gi... |
| Match: gi|639703|gb|AAA61642.1| |
score: 45.05 |
e-value: 0.001 |
Identity: 38.18% |
Span: 165bp (19.9%) |
Frame: 1 |
| gi|639703|gb|AAA61642.1| transcription initiation factor TFIIF middle subunit |
| Match: gi|4139897|pdb|2BBY| |
score: 42.74 |
e-value: 0.007 |
Identity: 41.18% |
Span: 153bp (18.4%) |
Frame: 1 |
| gi|4139897|pdb|2BBY| Dna-Binding Domain From Human Rap30, Nmr, 30 Structures gi|4139929|pdb|1BBY| Dna-Binding Doma... |
| Match: gi|25151550|ref|NP_741661.1| |
score: 41.97 |
e-value: 0.003 |
Identity: 40% |
Span: 150bp (18.1%) |
Frame: 1 |
| gi|25151550|ref|NP_741661.1| transcription factor (29.6 kD) (5T471) [Caenorhabditis elegans] gi|21038853|emb|CAD31828... |
| Match: gi|19073998|ref|NP_584604.1| |
score: 30.03 |
e-value: 7.9e-10 |
Identity: 29.73% |
Span: 222bp (26.7%) |
Frame: 3 |
| gi|19073998|ref|NP_584604.1| TRANSCRIPTION INITIATION FACTOR TFIIF BETA SUBUNIT [Encephalitozoon cuniculi] gi|1906864... |
| Match: gi|38174399|gb|AAH61312.1| |
score: 28.49 |
e-value: 3.9e-08 |
Identity: 30.36% |
Span: 168bp (20.2%) |
Frame: 3 |
| gi|38174399|gb|AAH61312.1| Unknown (protein for MGC:75790) [Silurana tropicalis] |
| Match: gi|25151550|ref|NP_741661.1| |
score: 21.17 |
e-value: 0.003 |
Identity: 20.96% |
Span: 453bp (54.5%) |
Frame: 3 |
| gi|25151550|ref|NP_741661.1| transcription factor (29.6 kD) (5T471) [Caenorhabditis elegans] gi|21038853|emb|CAD31828... |
|
| arabidopsis/peptide [blastx] | Showing best 4 hits recorded |
| Match: At1g75510.1 |
score: 180.3 |
e-value: 1.7e-73 |
Identity: 58.52% |
Span: 516bp (62.1%) |
Frame: 3 |
| At1g75510.1 68408.m08055 transcription initiation factor -related similar to transcription initiation factor iif, bet... |
| Match: At3g52270.1 |
score: 129 |
e-value: 3.6e-52 |
Identity: 48.18% |
Span: 357bp (43.0%) |
Frame: 3 |
| At3g52270.1 68410.m05323 transcription initiation factor IIF, beta subunit -related contains Pfam profile: PF02270 Tr... |
| Match: At1g75510.1 |
score: 114.4 |
e-value: 1.7e-73 |
Identity: 82.35% |
Span: 204bp (24.5%) |
Frame: 1 |
| At1g75510.1 68408.m08055 transcription initiation factor -related similar to transcription initiation factor iif, bet... |
| Match: At3g52270.1 |
score: 94.36 |
e-value: 3.6e-52 |
Identity: 56.16% |
Span: 219bp (26.4%) |
Frame: 1 |
| At3g52270.1 68410.m05323 transcription initiation factor IIF, beta subunit -related contains Pfam profile: PF02270 Tr... |
|
