| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|225428904|ref|XP_002285375.1| |
score: 119 |
e-value: 4e-25 |
Identity: 59.55% |
Span: 267bp (31.9%) |
Frame: 2 |
| PREDICTED: similar to reticulon family protein (RTNLB11) [Vitis vinifera] >gi270258230|emb|CBI40265.1| unnamed protei... |
| Match: gi|255555287|ref|XP_002518680.1| |
score: 116 |
e-value: 3e-24 |
Identity: 60.67% |
Span: 267bp (31.9%) |
Frame: 2 |
| Reticulon-3, putative [Ricinus communis] >gi223542061|gb|EEF43605.1| Reticulon-3, putative [Ricinus communis] |
| Match: gi|224105613|ref|XP_002313873.1| |
score: 109 |
e-value: 3e-22 |
Identity: 58.43% |
Span: 267bp (31.9%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222850281|gb|EEE87828.1| predicted protein [Populus trichocarpa] |
| Match: gi|224060588|ref|XP_002300239.1| |
score: 105 |
e-value: 5e-21 |
Identity: 58.14% |
Span: 258bp (30.8%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222847497|gb|EEE85044.1| predicted protein [Populus trichocarpa] |
| Match: gi|255633074|gb|ACU16892.1| |
score: 104 |
e-value: 1e-20 |
Identity: 56.98% |
Span: 258bp (30.8%) |
Frame: 2 |
| unknown [Glycine max] |
| Match: gi|30679374|ref|NP_179130.2| |
score: 100 |
e-value: 3e-19 |
Identity: 50% |
Span: 267bp (31.9%) |
Frame: 2 |
| reticulon family protein (RTNLB10) [Arabidopsis thaliana] >gi75127109|sp|Q6NPD8.1|RTNLJ_ARATH RecName: Full=Reticulon... |
| Match: gi|4662633|gb|AAD26905.1| |
score: 100 |
e-value: 3e-19 |
Identity: 50% |
Span: 267bp (31.9%) |
Frame: 2 |
| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|255631396|gb|ACU16065.1| |
score: 90.1 |
e-value: 3e-16 |
Identity: 50.59% |
Span: 255bp (30.5%) |
Frame: 2 |
| unknown [Glycine max] |
| Match: gi|226502652|ref|NP_001141071.1| |
score: 84 |
e-value: 2e-14 |
Identity: 48.84% |
Span: 258bp (30.8%) |
Frame: 2 |
| hypothetical protein LOC100273152 [Zea mays] >gi194702502|gb|ACF85335.1| unknown [Zea mays] |
| Match: gi|195637908|gb|ACG38422.1| |
score: 82.8 |
e-value: 4e-14 |
Identity: 46.51% |
Span: 258bp (30.8%) |
Frame: 2 |
| reticulon [Zea mays] |
| Match: gi|168003263|ref|XP_001754332.1| |
score: 82.8 |
e-value: 4e-14 |
Identity: 46.07% |
Span: 267bp (31.9%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162694434|gb|EDQ80782.1| predicted protein [Physcomitrella... |
| Match: gi|115461218|ref|NP_001054209.1| |
score: 82 |
e-value: 7e-14 |
Identity: 45.78% |
Span: 249bp (29.7%) |
Frame: 2 |
| Os04g0670000 [Oryza sativa (japonica cultivar-group)] >gi38345298|emb|CAE02821.2| OSJNBa0043A12.26 [Oryza sativa (jap... |
| Match: gi|168052846|ref|XP_001778850.1| |
score: 79.7 |
e-value: 4e-13 |
Identity: 45.98% |
Span: 261bp (31.2%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162669719|gb|EDQ56300.1| predicted protein [Physcomitrella... |
| Match: gi|226495645|ref|NP_001149959.1| |
score: 79.3 |
e-value: 5e-13 |
Identity: 45.24% |
Span: 252bp (30.1%) |
Frame: 2 |
| reticulon [Zea mays] >gi195631113|gb|ACG36657.1| reticulon [Zea mays] >gi|195635759|gb|ACG37348.1| reticulon [Zea may... |
| Match: gi|270236090|emb|CBI25359.1| |
score: 78.6 |
e-value: 8e-13 |
Identity: 40.91% |
Span: 264bp (31.5%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|242074720|ref|XP_002447296.1| |
score: 77.4 |
e-value: 2e-12 |
Identity: 41.98% |
Span: 243bp (29.0%) |
Frame: 2 |
| hypothetical protein SORBIDRAFT_06g032290 [Sorghum bicolor] >gi241938479|gb|EES11624.1| hypothetical protein SORBIDRA... |
| Match: gi|225448687|ref|XP_002275157.1| |
score: 77.4 |
e-value: 2e-12 |
Identity: 41.11% |
Span: 264bp (31.5%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|145362438|ref|NP_974276.3| |
score: 76.6 |
e-value: 3e-12 |
Identity: 37.21% |
Span: 258bp (30.8%) |
Frame: 2 |
| reticulon family protein [Arabidopsis thaliana] >gi110743729|dbj|BAE99701.1| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|42572359|ref|NP_974275.1| |
score: 76.6 |
e-value: 3e-12 |
Identity: 37.21% |
Span: 258bp (30.8%) |
Frame: 2 |
| reticulon family protein [Arabidopsis thaliana] >gi75151434|sp|Q8GYH6.1|RTNLP_ARATH RecName: Full=Reticulon-like prot... |
| Match: gi|168013325|ref|XP_001759351.1| |
score: 76.3 |
e-value: 4e-12 |
Identity: 41.38% |
Span: 261bp (31.2%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162689281|gb|EDQ75653.1| predicted protein [Physcomitrella... |
| Match: gi|21593206|gb|AAM65155.1| |
score: 75.9 |
e-value: 5e-12 |
Identity: 46.91% |
Span: 243bp (29.0%) |
Frame: 2 |
| unknown [Arabidopsis thaliana] |
| Match: gi|18402246|ref|NP_566635.1| |
score: 75.9 |
e-value: 5e-12 |
Identity: 46.91% |
Span: 243bp (29.0%) |
Frame: 2 |
| reticulon family protein (RTNLB11) [Arabidopsis thaliana] >gi75274072|sp|Q9LT71.1|RTNLK_ARATH RecName: Full=Reticulon... |
| Match: gi|145332641|ref|NP_001078186.1| |
score: 75.5 |
e-value: 7e-12 |
Identity: 47.5% |
Span: 240bp (28.7%) |
Frame: 2 |
| reticulon family protein (RTNLB11) [Arabidopsis thaliana] |
| Match: gi|168065612|ref|XP_001784743.1| |
score: 75.1 |
e-value: 9e-12 |
Identity: 41.38% |
Span: 261bp (31.2%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162663681|gb|EDQ50432.1| predicted protein [Physcomitrella... |
| Match: gi|224144977|ref|XP_002325482.1| |
score: 73.6 |
e-value: 3e-11 |
Identity: 36.05% |
Span: 258bp (30.8%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222862357|gb|EEE99863.1| predicted protein [Populus trichocarpa] |
|
| 9 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 7 hits recorded |
| Match: At2G15280.1 |
score: 100 |
e-value: 1e-21 |
Identity: 50% |
Span: 267bp (31.9%) |
Frame: 2 |
| reticulon family protein (RTNLB10) | chr2:6647273-6648496 FORWARD |
| Match: At3G10915.3 |
score: 76.6 |
e-value: 2e-14 |
Identity: 37.21% |
Span: 258bp (30.8%) |
Frame: 2 |
| reticulon family protein | chr3:3416106-3417063 REVERSE |
| Match: At3G10915.2 |
score: 76.6 |
e-value: 2e-14 |
Identity: 37.21% |
Span: 258bp (30.8%) |
Frame: 2 |
| reticulon family protein | chr3:3416106-3417502 REVERSE |
| Match: At3G19460.1 |
score: 75.9 |
e-value: 3e-14 |
Identity: 46.91% |
Span: 243bp (29.0%) |
Frame: 2 |
| reticulon family protein (RTNLB11) | chr3:6747606-6748910 FORWARD |
| Match: At3G19460.2 |
score: 75.5 |
e-value: 4e-14 |
Identity: 47.5% |
Span: 240bp (28.7%) |
Frame: 2 |
| reticulon family protein (RTNLB11) | chr3:6747919-6748910 FORWARD |
| Match: At3G10915.4 |
score: 72 |
e-value: 4e-13 |
Identity: 36.78% |
Span: 258bp (30.8%) |
Frame: 2 |
| reticulon family protein | chr3:3416106-3417502 REVERSE |
| Match: At2G46170.1 |
score: 70.1 |
e-value: 2e-12 |
Identity: 40.7% |
Span: 258bp (30.8%) |
Frame: 2 |
| reticulon family protein (RTNLB5) | chr2:18972483-18974013 FORWARD |
|
| swissprot [blastx] | Showing best 4 hits recorded |
| Match: Q6NPD8 |
score: 100 |
e-value: 2e-20 |
Identity: 50% |
Span: 267bp (31.9%) |
Frame: 2 |
| Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2 SV=1 |
| Match: Q8GYH6 |
score: 76.6 |
e-value: 2e-13 |
Identity: 37.21% |
Span: 258bp (30.8%) |
Frame: 2 |
| Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1 |
| Match: Q9LT71 |
score: 75.9 |
e-value: 3e-13 |
Identity: 46.91% |
Span: 243bp (29.0%) |
Frame: 2 |
| Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2 SV=1 |
| Match: O82352 |
score: 70.1 |
e-value: 2e-11 |
Identity: 40.7% |
Span: 258bp (30.8%) |
Frame: 2 |
| Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1 |
|
