| arabidopsis/peptide [blastx] | Showing best 3 hits recorded |
| Match: At4G36690.1 |
score: 56.6 |
e-value: 2e-08 |
Identity: 52.17% |
Span: 138bp (15.8%) |
Frame: -2 |
| Symbols: ATU2AF65A | ATU2AF65A; RNA binding | chr4:17294143-17297613 REVERSE |
| Match: At1G60900.1 |
score: 56.6 |
e-value: 2e-08 |
Identity: 54.55% |
Span: 132bp (15.1%) |
Frame: -2 |
| U2 snRNP auxiliary factor large subunit, putative | chr1:22427673-22431471 FORWARD |
| Match: At1G60830.1 |
score: 56.6 |
e-value: 2e-08 |
Identity: 54.55% |
Span: 132bp (15.1%) |
Frame: -2 |
| U2 snRNP auxiliary factor large subunit, putative | chr1:22398723-22399268 REVERSE |
|
| 1 lower scoring hits censored -- only 3 best hits are stored. |
| genbank/nr [blastx] | Showing best 14 hits recorded |
| Match: gi|3850821|emb|CAA77135.1| |
score: 60.1 |
e-value: 1e-07 |
Identity: 59.09% |
Span: 132bp (15.1%) |
Frame: -2 |
| gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor, large subunit [Nicotiana plumbaginifolia] |
| Match: gi|68036764|gb|AAY84880.1| |
score: 59.3 |
e-value: 2e-07 |
Identity: 61.36% |
Span: 132bp (15.1%) |
Frame: -2 |
| U2AF |
| Match: gi|108864648|gb|ABG22574.1| |
score: 58.5 |
e-value: 4e-07 |
Identity: 41.89% |
Span: 222bp (25.4%) |
Frame: -2 |
| transposon protein, putative, CACTA, En/Spm sub-class, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|108864649|gb|ABA95281.2| |
score: 58.5 |
e-value: 4e-07 |
Identity: 41.89% |
Span: 222bp (25.4%) |
Frame: -2 |
| transposon |
| Match: gi|22655131|gb|AAM98156.1| |
score: 56.6 |
e-value: 1e-06 |
Identity: 54.55% |
Span: 132bp (15.1%) |
Frame: -2 |
| putative U2 snRNP auxiliary factor [Arabidopsis thaliana] |
| Match: gi|30696485|ref|NP_176287.3| |
score: 56.6 |
e-value: 1e-06 |
Identity: 54.55% |
Span: 132bp (15.1%) |
Frame: -2 |
| U2 snRNP auxiliary factor large subunit, putative [Arabidopsis thaliana] >gi209572798|sp|Q8L716.2|U2A2B_ARATH RecName... |
| Match: gi|15234495|ref|NP_195387.1| |
score: 56.6 |
e-value: 1e-06 |
Identity: 52.17% |
Span: 138bp (15.8%) |
Frame: -2 |
| ATU2AF65A; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi75318082|sp|O23212.2|U2A... |
| Match: gi|18406905|ref|NP_564764.1| |
score: 56.6 |
e-value: 1e-06 |
Identity: 54.55% |
Span: 132bp (15.1%) |
Frame: -2 |
| gi|18406905|ref|NP_564764.1| U2 snRNP auxiliary factor, large subunit, putative [Arabidopsis thaliana] gi|25404293|pi... |
| Match: gi|12323333|gb|AAG51641.1| |
score: 56.6 |
e-value: 1e-06 |
Identity: 54.55% |
Span: 132bp (15.1%) |
Frame: -2 |
| gi|12323333|gb|AAG51641.1| putative U2 snRNP auxiliary factor; 19096-22891 [Arabidopsis thaliana] |
| Match: gi|92875570|gb|ABE83506.1| |
score: 56.2 |
e-value: 2e-06 |
Identity: 56.82% |
Span: 132bp (15.1%) |
Frame: -2 |
| RNA-binding |
| Match: gi|3850823|emb|CAA77136.1| |
score: 55.8 |
e-value: 2e-06 |
Identity: 56.82% |
Span: 132bp (15.1%) |
Frame: -2 |
| gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor, large subunit [Nicotiana plumbaginifolia] |
| Match: gi|9858779|gb|AAG01126.1| |
score: 55.8 |
e-value: 2e-06 |
Identity: 54.55% |
Span: 132bp (15.1%) |
Frame: -2 |
| gi|9858779|gb|AAG01126.1| BAC19.11 [Lycopersicon esculentum] |
| Match: gi|92883121|gb|ABE86783.1| |
score: 53.1 |
e-value: 2e-05 |
Identity: 54.55% |
Span: 132bp (15.1%) |
Frame: -2 |
| U2 |
| Match: gi|108864607|gb|ABA94914.2| |
score: 50.4 |
e-value: 0.0001 |
Identity: 52.27% |
Span: 132bp (15.1%) |
Frame: -2 |
| U2 |
|
| 17 lower scoring hits censored -- only 14 best hits are stored. |
