| genbank/nr [blastx] | Showing best 20 hits recorded |
| Match: gi|225443375|ref|XP_002267010.1| |
score: 325 |
e-value: 5e-87 |
Identity: 69% |
Span: 804bp (91.1%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|270229524|emb|CBI18448.1| |
score: 315 |
e-value: 4e-84 |
Identity: 67.4% |
Span: 804bp (91.1%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|255571790|ref|XP_002526838.1| |
score: 300 |
e-value: 2e-79 |
Identity: 68.7% |
Span: 735bp (83.2%) |
Frame: 1 |
| ribosomal pseudouridine synthase, putative [Ricinus communis] >gi223533842|gb|EEF35573.1| ribosomal pseudouridine syn... |
| Match: gi|42563328|ref|NP_178012.2| |
score: 287 |
e-value: 1e-75 |
Identity: 63.53% |
Span: 783bp (88.7%) |
Frame: 1 |
| pseudouridine synthase family protein [Arabidopsis thaliana] >gi75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA pse... |
| Match: gi|3834304|gb|AAC83020.1| |
score: 280 |
e-value: 1e-73 |
Identity: 61.9% |
Span: 783bp (88.7%) |
Frame: 1 |
| Contains similarity to gi1786244 hypothetical 24.9 kD protein in surA-hepA intergenic region yab0 from Escherichia co... |
| Match: gi|125604035|gb|EAZ43360.1| |
score: 238 |
e-value: 8e-61 |
Identity: 58.54% |
Span: 714bp (80.9%) |
Frame: 1 |
| hypothetical protein OsJ_27960 [Oryza sativa Japonica Group] |
| Match: gi|115477338|ref|NP_001062265.1| |
score: 238 |
e-value: 8e-61 |
Identity: 58.54% |
Span: 714bp (80.9%) |
Frame: 1 |
| Os08g0520100 [Oryza sativa (japonica cultivar-group)] >gi122234516|sp|Q0J4D4.1|PUS3_ORYSJ RecName: Full=RNA pseudouri... |
| Match: gi|242079953|ref|XP_002444745.1| |
score: 170 |
e-value: 2e-40 |
Identity: 52.29% |
Span: 636bp (72.0%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_07g027030 [Sorghum bicolor] >gi241941095|gb|EES14240.1| hypothetical protein SORBIDRA... |
| Match: gi|42408521|dbj|BAD09700.1| |
score: 151 |
e-value: 8e-35 |
Identity: 68.15% |
Span: 405bp (45.9%) |
Frame: 1 |
| putative ribosomal large subunit pseudouridine synthase C protein [Oryza sativa Japonica Group] >gi42409169|dbj|BAD10... |
| Match: gi|51970580|dbj|BAD43982.1| |
score: 150 |
e-value: 1e-34 |
Identity: 77.31% |
Span: 357bp (40.4%) |
Frame: 1 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|224129472|ref|XP_002328725.1| |
score: 107 |
e-value: 2e-21 |
Identity: 65.43% |
Span: 240bp (27.2%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222839023|gb|EEE77374.1| predicted protein [Populus trichocarpa] |
| Match: gi|225428918|ref|XP_002282614.1| |
score: 96.7 |
e-value: 3e-18 |
Identity: 36.68% |
Span: 588bp (66.6%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270258222|emb|CBI40257.1| unnamed protein product [Vitis vinifera] |
| Match: gi|255555275|ref|XP_002518674.1| |
score: 92.8 |
e-value: 4e-17 |
Identity: 35.12% |
Span: 600bp (68.0%) |
Frame: 1 |
| ribosomal pseudouridine synthase, putative [Ricinus communis] >gi223542055|gb|EEF43599.1| ribosomal pseudouridine syn... |
| Match: gi|15230381|ref|NP_188575.1| |
score: 87 |
e-value: 2e-15 |
Identity: 33.01% |
Span: 594bp (67.3%) |
Frame: 1 |
| pseudouridine synthase family protein [Arabidopsis thaliana] >gi75274073|sp|Q9LT72.1|PUS4_ARATH RecName: Full=RNA pse... |
| Match: gi|42408520|dbj|BAD09699.1| |
score: 84 |
e-value: 2e-14 |
Identity: 47.47% |
Span: 264bp (29.9%) |
Frame: 1 |
| hypothetical protein [Oryza sativa Japonica Group] >gi42409168|dbj|BAD10434.1| hypothetical protein [Oryza sativa Jap... |
| Match: gi|222641041|gb|EEE69173.1| |
score: 77.8 |
e-value: 1e-12 |
Identity: 32.39% |
Span: 603bp (68.3%) |
Frame: 1 |
| hypothetical protein OsJ_28343 [Oryza sativa Japonica Group] |
| Match: gi|218201639|gb|EEC84066.1| |
score: 77.8 |
e-value: 1e-12 |
Identity: 32.39% |
Span: 603bp (68.3%) |
Frame: 1 |
| hypothetical protein OsI_30347 [Oryza sativa Indica Group] |
| Match: gi|115477922|ref|NP_001062556.1| |
score: 77.8 |
e-value: 1e-12 |
Identity: 32.39% |
Span: 603bp (68.3%) |
Frame: 1 |
| Os09g0103500 [Oryza sativa (japonica cultivar-group)] >gi75117672|sp|Q69K07.1|PUS4_ORYSJ RecName: Full=RNA pseudourin... |
| Match: gi|226501200|ref|NP_001151637.1| |
score: 77.4 |
e-value: 2e-12 |
Identity: 31.67% |
Span: 636bp (72.0%) |
Frame: 1 |
| LOC100285271 [Zea mays] >gi195648278|gb|ACG43607.1| RNA binding protein [Zea mays] |
| Match: gi|224105621|ref|XP_002313876.1| |
score: 76.6 |
e-value: 3e-12 |
Identity: 42.34% |
Span: 411bp (46.5%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222850284|gb|EEE87831.1| predicted protein [Populus trichocarpa] |
|
| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At1G78910.1 |
score: 287 |
e-value: 7e-78 |
Identity: 63.53% |
Span: 783bp (88.7%) |
Frame: 1 |
| pseudouridine synthase family protein | chr1:29670162-29672450 FORWARD |
| Match: At3G19440.1 |
score: 87 |
e-value: 1e-17 |
Identity: 33.01% |
Span: 594bp (67.3%) |
Frame: 1 |
| pseudouridine synthase family protein | chr3:6740784-6743138 FORWARD |
|
| swissprot [blastx] | Showing best 4 hits recorded |
| Match: Q5XET6 |
score: 287 |
e-value: 8e-77 |
Identity: 63.53% |
Span: 783bp (88.7%) |
Frame: 1 |
| RNA pseudourine synthase 3, mitochondrial OS=Arabidopsis thaliana GN=At1g78910 PE=2 SV=1 |
| Match: Q0J4D4 |
score: 238 |
e-value: 5e-62 |
Identity: 58.54% |
Span: 714bp (80.9%) |
Frame: 1 |
| RNA pseudourine synthase 3, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0520100 PE=2 SV=1 |
| Match: Q9LT72 |
score: 87 |
e-value: 2e-16 |
Identity: 33.01% |
Span: 594bp (67.3%) |
Frame: 1 |
| RNA pseudourine synthase 4, mitochondrial OS=Arabidopsis thaliana GN=At3g19440 PE=2 SV=1 |
| Match: Q69K07 |
score: 77.8 |
e-value: 9e-14 |
Identity: 32.39% |
Span: 603bp (68.3%) |
Frame: 1 |
| RNA pseudourine synthase 4, mitochondrial OS=Oryza sativa subsp. japonica GN=Os09g0103500 PE=2 SV=1 |
|
